Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002515

Physical Location & Seq

Genomic Coordinates Forward (+)

27655809 .. 27658708

Gene Structure 2900 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g34990.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGATCCCAATCTCAACGTCCATTCCGCTTCCTTCCAAGCCAATCAAGCCCGCCGTCTTCCGATCTCGGAGGCGGCGCCTATCTACGAGCAGCTCCTTGCTGCCTTCCCGACCGCCGCGAAGTTCTGGACCCAATACGCCGAGGCCCAGATGGCGGCGAACAACGACGAGGCCACCAAGAACATATTCGCCAGGTGTTTGCTGAAATGCCGCCACGTCCCTCTCTGGCAGGCCTACCTCAATTTCGTCAAGAAAGTCAATTCCAACAACGGCCTAGAGGGTATTAAGGAAGCCTTTGATTTCGCAATCGATTCTGTTGGGGATGATATTGCGTCTGGCCCTGTGTGGTTGGACTACATTAGCTTCTTGAAGGGTAGTAATCAGATTGTTTCGATGAGGAAAGTGTACCAGAAGGCTGTTGTGAGTCCTAATCATAACCTGGACCAGATTTGGAGCGAGTATCAGAGCTTCGAAAGAACCTACAACAAGGACCTTGCGAAAAGCCTGCTGGCTGAGTTTTCCGGGAAGTTTAATCGCGCCAAGATTGTGTATTGGGAGAGGAGGAATGCGGTCAAGGACATTGATTTCAGCATGCTTGCTGTGCCGCCGACTGGCTCTCCCAGGGAAGAAGGGCAGTGGATGGCGTGGAAGAAGCTGTTGGCTTTTGAGAAGGAGAACAAACAGATGATAGATGTTGCGTGGTGCAACAAGCGAATTGTGTTGGTGTATGAGCAGTGCCTGATGTATCTGTGCCATTACCCTGATATGTGGTATGATTATGCAATGTGGCTTGTGAATAGTGGTTCTGTGGATGCTGCGGTGGAAGTGTTTAAGAGAGCTTTGACGGCTCTTCCTGAGTCAGAGATGCTGAAGTATGCGTATGCGGAGCTGGAAGAATCCAGGGGAGGAAACCAGGCTGCAAAGAAGATATATGAGAGCCTTTTGGGAGATGGTGGTGCTAGCACTACATCAGGACTTGCTCAAATTCAGTTTCTTCGATTCTTAAGGAGGACTGAAGGTATCGAAGCTGCTCGCAGCTACTTTTTAGAAGCTAGAAAATCCCAGAATTGTACTTATAATGTATATATTGCTTATGCCAATATTGCTGTGTGTCAAGATAAAAATATGAAACTTGCACTTAATGTTTTTGAGGCTGGGATGAAACTGTTTTTGCATGAGCCTGAGTACATTCTTGAGTATTTAGATCTTTTGATTCGCTTGAATGATGATATAAATGCTAGAGCCTTGTTTGAGAGGGCATTATGCTCATTGCCAACTGAGAAATCGGTTGAGATATGGAACAGATTTGTCAAGTTTGAGCAAAATTATGGAAACTTGACCAGTCTGTTGAAGGTTGAGCAAAGAAAAAAAGAAGCACTTTCTAGAATAGGTGGTGAAGAGAAATCTTCATCTTCAGAAAGTTCATTGCAGGATGTTGTATCACGATATACTTTCAGGAATCTTTGTCCCTGCTCTGTGAAGGATCTGGATCATTTAACCCGAGAAGAGTCCCTCTCTAGAAATATGAATAGGAAGCTGGATAGTGCCTCGACTGTTCCGACTGAAGCTAAACCAGCTGTGGTACCAGATTCATCAGTTCCAGTGTCTGCAAAAGTAGTTTATCCAGCTACTAATCAGACCATGCCTACAACTGTGGTTCCAAACCCAGGGCTGCGAAGCCAAACACCCATGGCTGGAAATGTCCAAACCACAACGGGGCTTGTAGGTGGAGATCCAAAGTTTGATGATGTACTACATACCGCACCTGCTTTGGTAGCCTTCTTGACGAATATGCCGCAGCAAGTTGGGGGTCCAACCCCAGATGTGGATGTTGTGTTATCATTCATTCTGCAAAGTGACATACCAATCAGCAGAAAAAGGAAAGCCGATGGAAGGGATGATGAAGTCAATCTCTTGCAGGATCTCCCAGTAGATGTTTTCAAGATGCGGCAGTTGAAGAAGTATCAGGGTTCTGGTTCTCAATCAGGATCTGCTTCCTATGGGAGTTCTAGTTGTAGTTCAGGAGATTACAGTGTAGTAACTCGAAACACTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Suf TPR_14

Protein Analysis

686

Amino Acids

76.85

Weight (kDa)

6.7

Isoelectric Point (pI)

45.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suf	PF05843	19 - 496	1.8e-136	Suppressor of forked protein (Suf)
HAT_PRP39_N	PF23240	22 - 155	5.1e-26	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	28 - 166	1.5e-11	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C	PF23241	207 - 320	1.1e-20	PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	214 - 312	8.8e-08	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N	PF23240	332 - 454	9.9e-06	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	370 - 447	2.9e-06	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002515)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17760
fragaria_vesca	FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_6g34990
malus_domestica	MD09G1000100.v1.1
prunus_persica	Prupe.1G353000_v2.0.a1
pyrus_communis	pycom08g21780
rosa_chinensis	RchiOBHm_Chr2g0146051 RchiOBHm_Chr7g0218051
rosa_laevigata	RLG00000002420 RLG00000020181
rosa_multiflora	Rmu_sc0000379.1_g000001 Rmu_sc0009440.1_g000001 Rmu_sc0009440.1_g000003 Rmu_sc0014682.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434850 Rroxscaffold_2G00100320 Rroxscaffold_3G00241460
rosa_rugosa	Rorug07G0173100
rosa_samantha	Rh2AG448900 Rh2BG461300 Rh2CG435900 Rh2DG470500 Rh7AG315500 Rh7BG305800 Rh7CG333000 Rh7DG313800 Rh7DG314300
rosa_wichuraiana	Rw2G036660 Rw7G026650 Rw7G026740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1077
AarI	CACCTGC	1 cut(s)	1774
Acc36I	ACCTGC	1 cut(s)	1774
Acc65I	GGTACC	1 cut(s)	1582
AccB1I	GGYRCC	2 cut(s)	76, 1582
AccII	CGCG	2 cut(s)	119, 537
AclWI	GGATC	6 cut(s)	12, 1491, 1497, 1727, 1929, 1996
AcsI	RAATTY	1 cut(s)	984
AcuI	CTGAAG	4 cut(s)	890, 1035, 1398, 1584
AcyI	GRCGYC	1 cut(s)	77
AfaI	GTAC	5 cut(s)	407, 1072, 1187, 1584, 1752
AfiI	CCNNNNNNNGG	7 cut(s)	154, 611, 1667, 1694, 1716, 1825, 1893
AflII	CTTAAG	1 cut(s)	1003
AgsI	TTSAA	5 cut(s)	370, 1222, 1351, 1942, 1957
AjiI	CACGTC	1 cut(s)	217
AjnI	CCWGG	6 cut(s)	191, 438, 620, 899, 912, 1666
AjuI	GAANNNNNNNTTGG	4 cut(s)	170, 202, 641, 673
AlwI	GGATC	6 cut(s)	12, 1491, 1497, 1727, 1929, 1996
AlwNI	CAGNNNCTG	3 cut(s)	739, 1607, 1991
Ama87I	CYCGRG	1 cut(s)	1500
AoxI	GGCC	5 cut(s)	144, 171, 231, 271, 337
ApeKI	GCWGC	8 cut(s)	91, 101, 815, 917, 1028, 1035, 1672, 1798
ApoI	RAATTY	1 cut(s)	984
Asp700I	GAANNNNTTC	1 cut(s)	185
Asp718I	GGTACC	1 cut(s)	1582
AspLEI	GCGC	2 cut(s)	79, 539
AspS9I	GGNCC	6 cut(s)	129, 145, 338, 442, 490, 1811
AsuC2I	CCSGG	1 cut(s)	523
AsuHPI	GGTGA	1 cut(s)	1406
AsuII	TTCGAA	1 cut(s)	471
AsuNHI	GCTAGC	1 cut(s)	959
AvaI	CYCGRG	1 cut(s)	1500
AvaII	GGWCC	4 cut(s)	129, 442, 490, 1811
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	2 cut(s)	76, 1582
BarI	GAAGNNNNNNTAC	2 cut(s)	452, 484
BbsI	GAAGAC	1 cut(s)	50
BbvI	GCAGC	8 cut(s)	88, 103, 802, 904, 1015, 1047, 1659, 1810
BccI	CCATC	4 cut(s)	145, 634, 944, 1883
BceAI	ACGGC	3 cut(s)	39, 286, 861
BcgI	CGANNNNNNTGC	2 cut(s)	487, 521
BciT130I	CCWGG	6 cut(s)	193, 440, 622, 901, 914, 1668
BcnI	CCSGG	1 cut(s)	523
BfaI	CTAG	7 cut(s)	275, 960, 1053, 1239, 1383, 1518, 2010
BfoI	RGCGCY	1 cut(s)	80
BfrI	CTTAAG	1 cut(s)	1003
BfuAI	ACCTGC	1 cut(s)	1774
BglI	GCCNNNNNGGC	1 cut(s)	152
BglII	AGATCT	1 cut(s)	1204
Bme1390I	CCNGG	7 cut(s)	193, 440, 523, 622, 901, 914, 1668
Bme18I	GGWCC	4 cut(s)	129, 442, 490, 1811
BmeT110I	CYCGRG	1 cut(s)	1500
BmgBI	CACGTC	1 cut(s)	217
BmgT120I	GGNCC	6 cut(s)	129, 145, 338, 442, 490, 1811
BmiI	GGNNCC	6 cut(s)	6, 78, 131, 1584, 1659, 1812
BmrFI	CCNGG	7 cut(s)	193, 440, 523, 622, 901, 914, 1668
BmrI	ACTGGG	1 cut(s)	1922
BmsI	GCATC	3 cut(s)	802, 855, 1935
BmtI	GCTAGC	1 cut(s)	963
BmuI	ACTGGG	1 cut(s)	1922
BpiI	GAAGAC	1 cut(s)	50
BplI	GAGNNNNNCTC	2 cut(s)	1499, 1531
Bpu14I	TTCGAA	1 cut(s)	471
BpuEI	CTTGAG	1 cut(s)	1214
BpuMI	CCSGG	1 cut(s)	523
Bsa29I	ATCGAT	1 cut(s)	309
BsaBI	GATNNNNATC	2 cut(s)	9, 1488
BsaHI	GRCGYC	1 cut(s)	77
BsaJI	CCNNGG	7 cut(s)	141, 620, 621, 900, 1666, 1667, 1689
BsaXI	ACNNNNNCTCC	4 cut(s)	601, 631, 1996, 2026
Bsc4I	CCNNNNNNNGG	7 cut(s)	154, 611, 1667, 1694, 1716, 1825, 1893
Bse1I	ACTGG	4 cut(s)	616, 1341, 1601, 1928
Bse3DI	GCAATG	3 cut(s)	789, 1268, 1424
Bse8I	GATNNNNATC	2 cut(s)	9, 1488
BseBI	CCWGG	6 cut(s)	193, 440, 622, 901, 914, 1668
BseCI	ATCGAT	1 cut(s)	309
BseDI	CCNNGG	7 cut(s)	141, 620, 621, 900, 1666, 1667, 1689
BseGI	GGATG	7 cut(s)	328, 645, 817, 1164, 1438, 1834, 1903
BseJI	GATNNNNATC	2 cut(s)	9, 1488
BseLI	CCNNNNNNNGG	7 cut(s)	154, 611, 1667, 1694, 1716, 1825, 1893
BseMI	GCAATG	3 cut(s)	789, 1268, 1424
BseMII	CTCAG	4 cut(s)	504, 846, 1173, 1269
BseNI	ACTGG	4 cut(s)	616, 1341, 1601, 1928
BseRI	GAGGAG	1 cut(s)	574
BseXI	GCAGC	8 cut(s)	88, 103, 802, 904, 1015, 1047, 1659, 1810
BseYI	CCCAGC	1 cut(s)	1154
Bsh1236I	CGCG	2 cut(s)	119, 537
Bsh1285I	CGRYCG	1 cut(s)	114
BshFI	GGCC	5 cut(s)	146, 173, 233, 273, 339
BshNI	GGYRCC	2 cut(s)	76, 1582
BshVI	ATCGAT	1 cut(s)	309
BsiEI	CGRYCG	1 cut(s)	114
BsiHKCI	CYCGRG	1 cut(s)	1500
BsiSI	CCGG	1 cut(s)	522
BslFI	GGGAC	3 cut(s)	203, 1452, 1495
BslI	CCNNNNNNNGG	7 cut(s)	154, 611, 1667, 1694, 1716, 1825, 1893
BsmFI	GGGAC	3 cut(s)	203, 1452, 1495
BsmI	GAATGC	1 cut(s)	571
BsnI	GGCC	5 cut(s)	146, 173, 233, 273, 339
BsoBI	CYCGRG	1 cut(s)	1500
Bsp119I	TTCGAA	1 cut(s)	471
Bsp143I	GATC	8 cut(s)	4, 63, 1204, 1483, 1489, 1732, 1921, 1988
Bsp19I	CCATGG	1 cut(s)	1689
BspANI	GGCC	5 cut(s)	146, 173, 233, 273, 339
BspCNI	CTCAG	4 cut(s)	505, 847, 1174, 1270
BspDI	ATCGAT	1 cut(s)	309
BspFNI	CGCG	2 cut(s)	119, 537
BspLI	GGNNCC	6 cut(s)	6, 78, 131, 1584, 1659, 1812
BspMI	ACCTGC	1 cut(s)	1774
BspOI	GCTAGC	1 cut(s)	963
BspPI	GGATC	6 cut(s)	12, 1491, 1497, 1727, 1929, 1996
BspQI	GCTCTTC	1 cut(s)	855
BspT104I	TTCGAA	1 cut(s)	471
BspT107I	GGYRCC	2 cut(s)	76, 1582
BspTI	CTTAAG	1 cut(s)	1003
BsrDI	GCAATG	3 cut(s)	789, 1268, 1424
BsrI	ACTGG	4 cut(s)	616, 1341, 1601, 1928
BssECI	CCNNGG	7 cut(s)	141, 620, 621, 900, 1666, 1667, 1689
BssMI	GATC	8 cut(s)	4, 63, 1204, 1483, 1489, 1732, 1921, 1988
BssNI	GRCGYC	1 cut(s)	77
BssT1I	CCWWGG	1 cut(s)	1689
Bst2UI	CCWGG	6 cut(s)	193, 440, 622, 901, 914, 1668
Bst4CI	ACNGT	4 cut(s)	1167, 1555, 1654, 2033
Bst6I	CTCTTC	3 cut(s)	855, 1392, 1500
BstACI	GRCGYC	1 cut(s)	77
BstAFI	CTTAAG	1 cut(s)	1003
BstBI	TTCGAA	1 cut(s)	471
BstC8I	GCNNGC	8 cut(s)	52, 231, 506, 510, 593, 597, 961, 1033
BstDEI	CTNAG	4 cut(s)	513, 855, 1182, 1278
BstDSI	CCRYGG	1 cut(s)	1689
BstF5I	GGATG	7 cut(s)	328, 645, 817, 1164, 1438, 1834, 1903
BstFNI	CGCG	2 cut(s)	119, 537
BstH2I	RGCGCY	1 cut(s)	80
BstHHI	GCGC	2 cut(s)	79, 539
BstKTI	GATC	8 cut(s)	7, 66, 1207, 1486, 1492, 1735, 1924, 1991
BstMBI	GATC	8 cut(s)	4, 63, 1204, 1483, 1489, 1732, 1921, 1988
BstMCI	CGRYCG	1 cut(s)	114
BstMWI	GCNNNNNNNGC	7 cut(s)	47, 152, 601, 845, 1103, 1574, 1775
BstNI	CCWGG	6 cut(s)	193, 440, 622, 901, 914, 1668
BstNSI	RCATGY	1 cut(s)	595
BstSCI	CCNGG	7 cut(s)	191, 438, 521, 620, 899, 912, 1666
BstUI	CGCG	2 cut(s)	119, 537
BstV1I	GCAGC	8 cut(s)	88, 103, 802, 904, 1015, 1047, 1659, 1810
BstV2I	GAAGAC	1 cut(s)	50
BstX2I	RGATCY	6 cut(s)	4, 1204, 1483, 1732, 1921, 1988
BstYI	RGATCY	6 cut(s)	4, 1204, 1483, 1732, 1921, 1988
Bsu15I	ATCGAT	1 cut(s)	309
BsuRI	GGCC	5 cut(s)	146, 173, 233, 273, 339
BsuTUI	ATCGAT	1 cut(s)	309
BtgI	CCRYGG	1 cut(s)	1689
BtrI	CACGTC	1 cut(s)	217
BtsCI	GGATG	7 cut(s)	328, 645, 817, 1164, 1438, 1834, 1903
BtsI	GCAGTG	2 cut(s)	641, 740
BtsIMutI	CAGTG	4 cut(s)	641, 740, 1608, 2038
BveI	ACCTGC	1 cut(s)	1774
Cac8I	GCNNGC	8 cut(s)	52, 231, 506, 510, 593, 597, 961, 1033
CaiI	CAGNNNCTG	3 cut(s)	739, 1607, 1991
CfoI	GCGC	2 cut(s)	79, 539
Cfr13I	GGNCC	6 cut(s)	129, 145, 338, 442, 490, 1811
ClaI	ATCGAT	1 cut(s)	309
CseI	GACGC	1 cut(s)	321
Csp6I	GTAC	5 cut(s)	406, 1071, 1186, 1583, 1751
CviAII	CATG	4 cut(s)	592, 1175, 1642, 1690
CviQI	GTAC	5 cut(s)	406, 1071, 1186, 1583, 1751
DdeI	CTNAG	4 cut(s)	513, 855, 1182, 1278
DinI	GGCGCC	1 cut(s)	78
DpnI	GATC	8 cut(s)	6, 65, 1206, 1485, 1491, 1734, 1923, 1990
DpnII	GATC	8 cut(s)	4, 63, 1204, 1483, 1489, 1732, 1921, 1988
Eam1104I	CTCTTC	3 cut(s)	855, 1392, 1500
EarI	CTCTTC	3 cut(s)	855, 1392, 1500
Eco130I	CCWWGG	1 cut(s)	1689
Eco147I	AGGCCT	1 cut(s)	233
Eco47I	GGWCC	4 cut(s)	129, 442, 490, 1811
Eco57I	CTGAAG	4 cut(s)	890, 1035, 1398, 1584
Eco88I	CYCGRG	1 cut(s)	1500
EcoO109I	RGGNCCY	1 cut(s)	490
EcoRII	CCWGG	6 cut(s)	191, 438, 620, 899, 912, 1666
EcoT14I	CCWWGG	1 cut(s)	1689
EgeI	GGCGCC	1 cut(s)	78
EheI	GGCGCC	1 cut(s)	78
ErhI	CCWWGG	1 cut(s)	1689
FaeI	CATG	4 cut(s)	595, 1178, 1645, 1693
FalI	AAGNNNNNCTT	4 cut(s)	278, 310, 1362, 1394
FaqI	GGGAC	3 cut(s)	203, 1452, 1495
FatI	CATG	4 cut(s)	591, 1174, 1641, 1689
FauI	CCCGC	1 cut(s)	59
FokI	GGATG	7 cut(s)	335, 652, 824, 1171, 1445, 1841, 1910
FspBI	CTAG	7 cut(s)	275, 960, 1053, 1239, 1383, 1518, 2010
GlaI	GCGC	2 cut(s)	78, 538
GsaI	CCCAGC	1 cut(s)	1158
HaeII	RGCGCY	1 cut(s)	80
HaeIII	GGCC	5 cut(s)	146, 173, 233, 273, 339
HapII	CCGG	1 cut(s)	522
HgaI	GACGC	1 cut(s)	321
HhaI	GCGC	2 cut(s)	79, 539
Hin1I	GRCGYC	1 cut(s)	77
Hin1II	CATG	4 cut(s)	595, 1178, 1645, 1693
Hin6I	GCGC	2 cut(s)	77, 537
HinP1I	GCGC	2 cut(s)	77, 537
HinfI	GANTC	9 cut(s)	311, 424, 857, 896, 999, 1213, 1459, 1508, 1589
HpaII	CCGG	1 cut(s)	522
HphI	GGTGA	1 cut(s)	1406
Hpy166II	GTNNAC	1 cut(s)	406
Hpy188I	TCNGA	8 cut(s)	63, 70, 384, 465, 862, 1417, 1560, 1638
Hpy8I	GTNNAC	1 cut(s)	406
Hpy99I	CGWCG	1 cut(s)	170
HpyCH4III	ACNGT	4 cut(s)	1167, 1555, 1654, 2033
HpyCH4IV	ACGT	2 cut(s)	18, 216
HpyCH4V	TGCA	9 cut(s)	705, 782, 920, 1136, 1174, 1429, 1610, 1852, 1918
HpyF10VI	GCNNNNNNNGC	7 cut(s)	47, 152, 601, 845, 1103, 1574, 1775
HpyF3I	CTNAG	4 cut(s)	513, 855, 1182, 1278
HpySE526I	ACGT	2 cut(s)	18, 216
Hsp92I	GRCGYC	1 cut(s)	77
Hsp92II	CATG	4 cut(s)	595, 1178, 1645, 1693
HspAI	GCGC	2 cut(s)	77, 537
KasI	GGCGCC	1 cut(s)	76
KpnI	GGTACC	1 cut(s)	1586
Kzo9I	GATC	8 cut(s)	4, 63, 1204, 1483, 1489, 1732, 1921, 1988
LguI	GCTCTTC	1 cut(s)	855
LmnI	GCTCC	3 cut(s)	99, 453, 886
Lsp1109I	GCAGC	8 cut(s)	88, 103, 802, 904, 1015, 1047, 1659, 1810
LweI	GCATC	3 cut(s)	802, 855, 1935
MaeI	CTAG	7 cut(s)	275, 960, 1053, 1239, 1383, 1518, 2010
MaeII	ACGT	2 cut(s)	18, 216
MaeIII	GTNAC	2 cut(s)	1856, 2038
MalI	GATC	8 cut(s)	6, 65, 1206, 1485, 1491, 1734, 1923, 1990
MboI	GATC	8 cut(s)	4, 63, 1204, 1483, 1489, 1732, 1921, 1988
MflI	RGATCY	6 cut(s)	4, 1204, 1483, 1732, 1921, 1988
MluCI	AATT	6 cut(s)	241, 259, 714, 984, 1066, 1324
Mly113I	GGCGCC	1 cut(s)	77
MlyI	GAGTC	3 cut(s)	433, 866, 1517
MmeI	TCCRAC	4 cut(s)	288, 330, 1583, 1838
MroXI	GAANNNNTTC	1 cut(s)	185
MseI	TTAA	6 cut(s)	285, 531, 831, 1004, 1140, 1496
MspA1I	CMGCKG	1 cut(s)	1577
MspCI	CTTAAG	1 cut(s)	1003
MspI	CCGG	1 cut(s)	522
MspR9I	CCNGG	7 cut(s)	193, 440, 523, 622, 901, 914, 1668
Mva1269I	GAATGC	1 cut(s)	571
MvaI	CCWGG	6 cut(s)	193, 440, 622, 901, 914, 1668
MvnI	CGCG	2 cut(s)	119, 537
MwoI	GCNNNNNNNGC	7 cut(s)	47, 152, 601, 845, 1103, 1574, 1775
NarI	GGCGCC	1 cut(s)	77
NciI	CCSGG	1 cut(s)	523
NcoI	CCATGG	1 cut(s)	1689
NdeII	GATC	8 cut(s)	4, 63, 1204, 1483, 1489, 1732, 1921, 1988
NheI	GCTAGC	1 cut(s)	959
NlaIII	CATG	4 cut(s)	595, 1178, 1645, 1693
NlaIV	GGNNCC	6 cut(s)	6, 78, 131, 1584, 1659, 1812
NmeAIII	GCCGAG	1 cut(s)	166
NmuCI	GTSAC	1 cut(s)	1856
NspI	RCATGY	1 cut(s)	595
NspV	TTCGAA	1 cut(s)	471
PaeI	GCATGC	1 cut(s)	595
PaqCI	CACCTGC	1 cut(s)	1774
PasI	CCCWGGG	2 cut(s)	621, 1667
PceI	AGGCCT	1 cut(s)	233
PciSI	GCTCTTC	1 cut(s)	855
PcsI	WCGNNNNNNNCGW	1 cut(s)	1556
PctI	GAATGC	1 cut(s)	571
PdmI	GAANNNNTTC	1 cut(s)	185
PfeI	GAWTC	6 cut(s)	311, 896, 999, 1213, 1459, 1589
PfoI	TCCNGGA	1 cut(s)	521
PleI	GAGTC	3 cut(s)	432, 865, 1516
PluTI	GGCGCC	1 cut(s)	80
PpsI	GAGTC	3 cut(s)	432, 865, 1516
PpuMI	RGGWCCY	1 cut(s)	490
PsiI	TTATAA	1 cut(s)	1077
Psp5II	RGGWCCY	1 cut(s)	490
Psp6I	CCWGG	6 cut(s)	191, 438, 620, 899, 912, 1666
PspFI	CCCAGC	1 cut(s)	1154
PspGI	CCWGG	6 cut(s)	191, 438, 620, 899, 912, 1666
PspN4I	GGNNCC	6 cut(s)	6, 78, 131, 1584, 1659, 1812
PspPI	GGNCC	6 cut(s)	129, 145, 338, 442, 490, 1811
PspPPI	RGGWCCY	1 cut(s)	490
PstNI	CAGNNNCTG	3 cut(s)	739, 1607, 1991
PsuI	RGATCY	6 cut(s)	4, 1204, 1483, 1732, 1921, 1988
PvuII	CAGCTG	1 cut(s)	1577
RsaI	GTAC	5 cut(s)	407, 1072, 1187, 1584, 1752
RsaNI	GTAC	5 cut(s)	406, 1071, 1186, 1583, 1751
SapI	GCTCTTC	1 cut(s)	855
SaqAI	TTAA	6 cut(s)	285, 531, 831, 1004, 1140, 1496
Sau3AI	GATC	8 cut(s)	4, 63, 1204, 1483, 1489, 1732, 1921, 1988
Sau96I	GGNCC	6 cut(s)	129, 145, 338, 442, 490, 1811
SchI	GAGTC	3 cut(s)	433, 866, 1517
ScrFI	CCNGG	7 cut(s)	193, 440, 523, 622, 901, 914, 1668
SfaNI	GCATC	3 cut(s)	802, 855, 1935
SfoI	GGCGCC	1 cut(s)	78
SfuI	TTCGAA	1 cut(s)	471
SinI	GGWCC	4 cut(s)	129, 442, 490, 1811
SmlI	CTYRAG	2 cut(s)	1003, 1193
SmoI	CTYRAG	2 cut(s)	1003, 1193
SphI	GCATGC	1 cut(s)	595
Sse9I	AATT	6 cut(s)	241, 259, 714, 984, 1066, 1324
SseBI	AGGCCT	1 cut(s)	233
SspDI	GGCGCC	1 cut(s)	76
SspI	AATATT	1 cut(s)	1102
SspMI	CTAG	7 cut(s)	275, 960, 1053, 1239, 1383, 1518, 2010
StuI	AGGCCT	1 cut(s)	233
StyD4I	CCNGG	7 cut(s)	191, 438, 521, 620, 899, 912, 1666
StyI	CCWWGG	1 cut(s)	1689
TaaI	ACNGT	4 cut(s)	1167, 1555, 1654, 2033
TaiI	ACGT	2 cut(s)	21, 219
TaqI	TCGA	7 cut(s)	309, 392, 471, 997, 1023, 1550, 2044
TasI	AATT	6 cut(s)	241, 259, 714, 984, 1066, 1324
TatI	WGTACW	3 cut(s)	1070, 1185, 1750
TauI	GCSGC	7 cut(s)	77, 119, 158, 213, 607, 1798, 1951
TfiI	GAWTC	6 cut(s)	311, 896, 999, 1213, 1459, 1589
Tru1I	TTAA	6 cut(s)	285, 531, 831, 1004, 1140, 1496
Tru9I	TTAA	6 cut(s)	285, 531, 831, 1004, 1140, 1496
TscAI	CASTG	4 cut(s)	641, 740, 1608, 2038
TseFI	GTSAC	1 cut(s)	1856
TseI	GCWGC	8 cut(s)	91, 101, 815, 917, 1028, 1035, 1672, 1798
Tsp45I	GTSAC	1 cut(s)	1856
TspDTI	ATGAA	8 cut(s)	1142, 1175, 1398, 1413, 1541, 1581, 1834, 1917
TspRI	CASTG	4 cut(s)	641, 740, 1608, 2038
Vha464I	CTTAAG	1 cut(s)	1003
VpaK11BI	GGWCC	4 cut(s)	129, 442, 490, 1811
XapI	RAATTY	1 cut(s)	984
XbaI	TCTAGA	2 cut(s)	1382, 1517
XceI	RCATGY	1 cut(s)	595
XmnI	GAANNNNTTC	1 cut(s)	185
XspI	CTAG	7 cut(s)	275, 960, 1053, 1239, 1383, 1518, 2010

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.