Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0002515

Physical Location & Seq

Genomic Coordinates Reverse (-)

2377 .. 17831

Gene Structure 15455 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1000100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGAACCCGAGTCTCGAAAAGTTGGAGATCAAGATCACAAATTCATCGATGATAAATACAGTGTTGAAGCCAGCGAAAATCAAGCCAATGAGGCACTACGTTTGCCCATTACAGAGGCAGCACCAATATACGAGCAGCTTTTAACGGTGTTTCCCACTGCGGCAAAATATTGGAAGCAATATGTGGAGGCGCAAATGGCTGTAAATAATGATGATGCCACAAAACAGATATTTAGCCGGTGTCTGTTGAATTGTCTGCAAATTCCTCTTTGGCGATGCTACATTCGTTTCATCAGAAAGGTCAATGACAAGAAGGGGGTAGAGGGTCAGGAAGAGACTAGAAAAGCTTTTGATTTTATGCTCAGTTATGTTGGAGCAGATATAGCATCCGGGCCTGTGTGGATGGAGTACCTCACTTTTTTAAAGTCTTTGCCGGCTTTAAACACACAGGAAGAGTCGCAGCGCATGACTGCTGTGCGAAAAGTATACCAGAAAGCCATTGTTACTCCTACCCATCACATCGAACAACTCTGGAAGGATTACGAAAATTTTGAAAATTCTGTCAGCCGTCAACTGGCAAAAGGACTGTTATCTGAATATCAACCCAAATTTAACAGCGCCAGGGCCGTTTATAGGGAGCGGAAGAAGTATGTTGATGAAATTGACTGGAATATGCTTGCTGTACCACCAAATGGCTCTTATAAGGAAGAACGACAATGGATGGCATGGAAAAAGTTATTAGCTTTCGAAAAAGGAAACCCACAAAGGATAGACAATGGATCATCCAACAAGCGAATCATTTTCACTTATGAGCAGTGTCTAATGTATCTATACCATTATCCTGATTTATGGTATGACTATGCCATGTGGCATGCAAAAAGTGGTTCTGTAGATACTGCAATTAAAGTATTTCAAAGAGCATTGAAGGTTCTTCCTGACTCGGAGATGCTTAGATATGCTTATGCAGAGCTGGAAGAATCCCGTGGAGCAATTCAGCCCACAAAGAAAATATATGAAGGCCTTTTGGGAGATGGTATTAACACATCAGCACTTGCTCATATACAGTTTATTCGCTTTTTAAGGAGAAATGAAGGAGTGGAAGCAGCTCGCAAGTACTTTTTAGAGGCGCGCAAATCTCCAAACTGCACGTACCATGTTTATGTTGCTTATGCGATGATGGCTTTCTGTCTTGACAAGGATCCAAAGATGGCACACAACGTTTTTGAAGCTGGGTTGAAACGGTTTATGCATGAGCCTGTTTACATTCTTGAATATGCAGACTTTTTAACTCGTTTGAATGATGATAGAAATATTCGGGCCTTATTTGAGAGGGCATTAAGCTCATTACCATCAGAAGAATCTGTCGAGGTATGGAAGCGATTCACCATTTTTGAGCAAACTTATGGAGATTTGGCTAGCATGTTGAAGGTTGAACAAAGGAAAAAAGCAGCACTTACCGGAGCAGGTGAAGAGGGACCTTCATCATTGGAAAGTTCATTGCAAGATGTTGCATCACGATATAGTTTCATGGATCTCTGGCCCTGCTCTTCAAAGGACTTGGATCATTTAGCCCGACAAGAGGTACCTTTAGTGAAAATGTTATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Suf TPR_14

Protein Analysis

536

Amino Acids

62.24

Weight (kDa)

6.82

Isoelectric Point (pI)

48.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suf	PF05843	31 - 520	2.3e-160	Suppressor of forked protein (Suf)
HAT_PRP39_N	PF23240	37 - 182	8.9e-26	PRP39 N-terminal HAT repeat
HAT_PRP39_C	PF23241	236 - 362	9e-22	PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	242 - 315	1e-06	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
TPR_14	PF13428	281 - 324	2.8e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002515)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17760
fragaria_vesca	FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_6g34990
malus_domestica	MD09G1000100.v1.1
prunus_persica	Prupe.1G353000_v2.0.a1
pyrus_communis	pycom08g21780
rosa_chinensis	RchiOBHm_Chr2g0146051 RchiOBHm_Chr7g0218051
rosa_laevigata	RLG00000002420 RLG00000020181
rosa_multiflora	Rmu_sc0000379.1_g000001 Rmu_sc0009440.1_g000001 Rmu_sc0009440.1_g000003 Rmu_sc0014682.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434850 Rroxscaffold_2G00100320 Rroxscaffold_3G00241460
rosa_rugosa	Rorug07G0173100
rosa_samantha	Rh2AG448900 Rh2BG461300 Rh2CG435900 Rh2DG470500 Rh7AG315500 Rh7BG305800 Rh7CG333000 Rh7DG313800 Rh7DG314300
rosa_wichuraiana	Rw2G036660 Rw7G026650 Rw7G026740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	702
AarI	CACCTGC	1 cut(s)	1454
Acc36I	ACCTGC	1 cut(s)	1454
Acc65I	GGTACC	1 cut(s)	1582
AccB1I	GGYRCC	1 cut(s)	1582
AccB7I	CCANNNNNTGG	1 cut(s)	692
AccBSI	CCGCTC	1 cut(s)	640
AccI	GTMKAC	1 cut(s)	486
AccII	CGCG	1 cut(s)	1129
AciI	CCGC	2 cut(s)	161, 640
AclI	AACGTT	1 cut(s)	1218
AclWI	GGATC	5 cut(s)	787, 1193, 1206, 1539, 1569
AcsI	RAATTY	5 cut(s)	41, 261, 547, 556, 608
AfaI	GTAC	5 cut(s)	410, 684, 1115, 1151, 1584
AfiI	CCNNNNNNNGG	4 cut(s)	574, 633, 692, 1579
AjnI	CCWGG	1 cut(s)	620
AluBI	AGCT	7 cut(s)	139, 347, 743, 970, 1106, 1229, 1341
AluI	AGCT	7 cut(s)	139, 347, 743, 970, 1106, 1229, 1341
Alw26I	GTCTC	2 cut(s)	18, 329
AlwI	GGATC	5 cut(s)	787, 1193, 1206, 1539, 1569
Ama87I	CYCGRG	1 cut(s)	8
AoxI	GGCC	5 cut(s)	392, 624, 1018, 1317, 1538
ApeKI	GCWGC	5 cut(s)	119, 136, 460, 1103, 1448
ApoI	RAATTY	5 cut(s)	41, 261, 547, 556, 608
Asp700I	GAANNNNTTC	1 cut(s)	1379
Asp718I	GGTACC	1 cut(s)	1582
AspLEI	GCGC	5 cut(s)	193, 465, 620, 1129, 1131
AspS9I	GGNCC	5 cut(s)	392, 624, 1317, 1475, 1539
AsuC2I	CCSGG	1 cut(s)	391
AsuHPI	GGTGA	2 cut(s)	1375, 1478
AsuII	TTCGAA	1 cut(s)	747
AsuNHI	GCTAGC	1 cut(s)	1415
AvaI	CYCGRG	1 cut(s)	8
AvaII	GGWCC	1 cut(s)	1475
BamHI	GGATCC	1 cut(s)	1198
BanI	GGYRCC	1 cut(s)	1582
BbvI	GCAGC	5 cut(s)	131, 148, 472, 1115, 1460
BccI	CCATC	7 cut(s)	397, 522, 715, 1025, 1171, 1201, 1357
BceAI	ACGGC	2 cut(s)	552, 611
BciT130I	CCWGG	1 cut(s)	622
BcnI	CCSGG	1 cut(s)	391
BcoDI	GTCTC	2 cut(s)	18, 329
BfaI	CTAG	3 cut(s)	339, 1416, 1606
BfmI	CTRYAG	1 cut(s)	888
BfoI	RGCGCY	1 cut(s)	621
BfuAI	ACCTGC	1 cut(s)	1454
BglI	GCCNNNNNGGC	1 cut(s)	92
BisI	GCNGC	6 cut(s)	120, 137, 162, 461, 1104, 1449
BlsI	GCNGC	6 cut(s)	121, 138, 163, 462, 1105, 1450
BmcAI	AGTACT	1 cut(s)	1115
Bme1390I	CCNGG	2 cut(s)	391, 622
Bme18I	GGWCC	1 cut(s)	1475
BmeT110I	CYCGRG	1 cut(s)	8
BmgT120I	GGNCC	5 cut(s)	392, 624, 1317, 1475, 1539
BmiI	GGNNCC	4 cut(s)	6, 1200, 1476, 1584
BmrFI	CCNGG	2 cut(s)	391, 622
BmsI	GCATC	5 cut(s)	205, 266, 395, 936, 1520
BmtI	GCTAGC	1 cut(s)	1419
Bpu14I	TTCGAA	1 cut(s)	747
BpuMI	CCSGG	1 cut(s)	391
Bsa29I	ATCGAT	1 cut(s)	48
BsaAI	YACGTR	1 cut(s)	1149
BsaBI	GATNNNNATC	1 cut(s)	33
BsaJI	CCNNGG	2 cut(s)	621, 982
BsaWI	WCCGGW	1 cut(s)	1457
Bsc4I	CCNNNNNNNGG	4 cut(s)	574, 633, 692, 1579
Bse118I	RCCGGY	2 cut(s)	237, 433
Bse1I	ACTGG	2 cut(s)	579, 671
Bse3DI	GCAATG	1 cut(s)	1496
Bse8I	GATNNNNATC	1 cut(s)	33
BseBI	CCWGG	1 cut(s)	622
BseCI	ATCGAT	1 cut(s)	48
BseDI	CCNNGG	2 cut(s)	621, 982
BseGI	GGATG	4 cut(s)	386, 408, 726, 782
BseJI	GATNNNNATC	1 cut(s)	33
BseLI	CCNNNNNNNGG	4 cut(s)	574, 633, 692, 1579
BseMI	GCAATG	1 cut(s)	1496
BseMII	CTCAG	1 cut(s)	376
BseNI	ACTGG	2 cut(s)	579, 671
BsePI	GCGCGC	1 cut(s)	1127
BseXI	GCAGC	5 cut(s)	131, 148, 472, 1115, 1460
BseYI	CCCAGC	1 cut(s)	1229
BsgI	GTGCAG	1 cut(s)	1129
Bsh1236I	CGCG	1 cut(s)	1129
BshFI	GGCC	5 cut(s)	394, 626, 1020, 1319, 1540
BshNI	GGYRCC	1 cut(s)	1582
BshVI	ATCGAT	1 cut(s)	48
BsiHKCI	CYCGRG	1 cut(s)	8
BsiSI	CCGG	4 cut(s)	238, 390, 434, 1458
BslFI	GGGAC	1 cut(s)	1488
BslI	CCNNNNNNNGG	4 cut(s)	574, 633, 692, 1579
BsmAI	GTCTC	2 cut(s)	18, 329
BsmFI	GGGAC	1 cut(s)	1488
BsnI	GGCC	5 cut(s)	394, 626, 1020, 1319, 1540
BsoBI	CYCGRG	1 cut(s)	8
Bsp119I	TTCGAA	1 cut(s)	747
Bsp143I	GATC	6 cut(s)	28, 34, 779, 1198, 1531, 1561
BspACI	CCGC	2 cut(s)	161, 640
BspANI	GGCC	5 cut(s)	394, 626, 1020, 1319, 1540
BspCNI	CTCAG	1 cut(s)	375
BspDI	ATCGAT	1 cut(s)	48
BspFNI	CGCG	1 cut(s)	1129
BspLI	GGNNCC	4 cut(s)	6, 1200, 1476, 1584
BspMI	ACCTGC	1 cut(s)	1454
BspOI	GCTAGC	1 cut(s)	1419
BspPI	GGATC	5 cut(s)	787, 1193, 1206, 1539, 1569
BspQI	GCTCTTC	1 cut(s)	1552
BspT104I	TTCGAA	1 cut(s)	747
BspT107I	GGYRCC	1 cut(s)	1582
BsrBI	CCGCTC	1 cut(s)	640
BsrDI	GCAATG	1 cut(s)	1496
BsrFI	RCCGGY	2 cut(s)	237, 433
BsrI	ACTGG	2 cut(s)	579, 671
BssAI	RCCGGY	2 cut(s)	237, 433
BssECI	CCNNGG	2 cut(s)	621, 982
BssHII	GCGCGC	1 cut(s)	1127
BssMI	GATC	6 cut(s)	28, 34, 779, 1198, 1531, 1561
BssNAI	GTATAC	1 cut(s)	487
Bst1107I	GTATAC	1 cut(s)	487
Bst2UI	CCWGG	1 cut(s)	622
Bst4CI	ACNGT	5 cut(s)	62, 148, 588, 1065, 1242
Bst6I	CTCTTC	4 cut(s)	327, 447, 1464, 1552
BstBAI	YACGTR	1 cut(s)	1149
BstBI	TTCGAA	1 cut(s)	747
BstC8I	GCNNGC	7 cut(s)	73, 435, 678, 873, 1108, 1129, 1417
BstDEI	CTNAG	2 cut(s)	362, 950
BstDSI	CCRYGG	1 cut(s)	982
BstF5I	GGATG	4 cut(s)	386, 408, 726, 782
BstFNI	CGCG	1 cut(s)	1129
BstH2I	RGCGCY	1 cut(s)	621
BstHHI	GCGC	5 cut(s)	193, 465, 620, 1129, 1131
BstKTI	GATC	6 cut(s)	31, 37, 782, 1201, 1534, 1564
BstMAI	GTCTC	2 cut(s)	18, 329
BstMBI	GATC	6 cut(s)	28, 34, 779, 1198, 1531, 1561
BstMWI	GCNNNNNNNGC	4 cut(s)	92, 197, 383, 1178
BstNI	CCWGG	1 cut(s)	622
BstNSI	RCATGY	2 cut(s)	875, 1423
BstSCI	CCNGG	2 cut(s)	389, 620
BstSFI	CTRYAG	1 cut(s)	888
BstUI	CGCG	1 cut(s)	1129
BstV1I	GCAGC	5 cut(s)	131, 148, 472, 1115, 1460
BstX2I	RGATCY	2 cut(s)	1198, 1531
BstYI	RGATCY	2 cut(s)	1198, 1531
BstZ17I	GTATAC	1 cut(s)	487
Bsu15I	ATCGAT	1 cut(s)	48
BsuRI	GGCC	5 cut(s)	394, 626, 1020, 1319, 1540
BsuTUI	ATCGAT	1 cut(s)	48
BtgI	CCRYGG	1 cut(s)	982
BtgZI	GCGATG	2 cut(s)	289, 1187
BtsCI	GGATG	4 cut(s)	386, 408, 726, 782
BtsI	GCAGTG	2 cut(s)	156, 821
BtsIMutI	CAGTG	3 cut(s)	67, 156, 821
BveI	ACCTGC	1 cut(s)	1454
Cac8I	GCNNGC	7 cut(s)	73, 435, 678, 873, 1108, 1129, 1417
CfoI	GCGC	5 cut(s)	193, 465, 620, 1129, 1131
Cfr10I	RCCGGY	2 cut(s)	237, 433
Cfr13I	GGNCC	5 cut(s)	392, 624, 1317, 1475, 1539
ClaI	ATCGAT	1 cut(s)	48
Csp6I	GTAC	5 cut(s)	409, 683, 1114, 1150, 1583
CviAII	CATG	8 cut(s)	466, 726, 865, 872, 1154, 1250, 1420, 1528
CviQI	GTAC	5 cut(s)	409, 683, 1114, 1150, 1583
DdeI	CTNAG	2 cut(s)	362, 950
DpnI	GATC	6 cut(s)	30, 36, 781, 1200, 1533, 1563
DpnII	GATC	6 cut(s)	28, 34, 779, 1198, 1531, 1561
DraI	TTTAAA	2 cut(s)	423, 441
Eam1104I	CTCTTC	4 cut(s)	327, 447, 1464, 1552
EarI	CTCTTC	4 cut(s)	327, 447, 1464, 1552
Eco147I	AGGCCT	1 cut(s)	1020
Eco47I	GGWCC	1 cut(s)	1475
Eco88I	CYCGRG	1 cut(s)	8
EcoO109I	RGGNCCY	1 cut(s)	1475
EcoRII	CCWGG	1 cut(s)	620
EcoT22I	ATGCAT	1 cut(s)	1251
FaeI	CATG	8 cut(s)	469, 729, 868, 875, 1157, 1253, 1423, 1531
FalI	AAGNNNNNCTT	2 cut(s)	1437, 1469
FaqI	GGGAC	1 cut(s)	1488
FatI	CATG	8 cut(s)	465, 725, 864, 871, 1153, 1249, 1419, 1527
FblI	GTMKAC	1 cut(s)	486
Fnu4HI	GCNGC	6 cut(s)	120, 137, 162, 461, 1104, 1449
FokI	GGATG	4 cut(s)	373, 415, 733, 769
Fsp4HI	GCNGC	6 cut(s)	120, 137, 162, 461, 1104, 1449
FspBI	CTAG	3 cut(s)	339, 1416, 1606
GlaI	GCGC	5 cut(s)	192, 464, 619, 1128, 1130
GluI	GCNGC	6 cut(s)	120, 137, 162, 461, 1104, 1449
GsaI	CCCAGC	1 cut(s)	1233
HaeII	RGCGCY	1 cut(s)	621
HaeIII	GGCC	5 cut(s)	394, 626, 1020, 1319, 1540
HapII	CCGG	4 cut(s)	238, 390, 434, 1458
HhaI	GCGC	5 cut(s)	193, 465, 620, 1129, 1131
Hin1II	CATG	8 cut(s)	469, 729, 868, 875, 1157, 1253, 1423, 1531
Hin6I	GCGC	5 cut(s)	191, 463, 618, 1127, 1129
HinP1I	GCGC	5 cut(s)	191, 463, 618, 1127, 1129
HincII	GTYRAC	1 cut(s)	572
HindII	GTYRAC	1 cut(s)	572
HindIII	AAGCTT	1 cut(s)	345
HinfI	GANTC	7 cut(s)	11, 455, 795, 938, 977, 1358, 1380
HpaII	CCGG	4 cut(s)	238, 390, 434, 1458
HphI	GGTGA	2 cut(s)	1375, 1478
Hpy166II	GTNNAC	3 cut(s)	487, 572, 1261
Hpy188I	TCNGA	4 cut(s)	296, 595, 943, 1354
Hpy188III	TCNNGA	9 cut(s)	15, 32, 329, 532, 842, 935, 1190, 1268, 1515
Hpy8I	GTNNAC	3 cut(s)	487, 572, 1261
HpyAV	CCTTC	7 cut(s)	307, 529, 919, 1010, 1085, 1420, 1488
HpyCH4III	ACNGT	5 cut(s)	62, 148, 588, 1065, 1242
HpyCH4IV	ACGT	3 cut(s)	100, 1148, 1218
HpyCH4V	TGCA	9 cut(s)	259, 875, 899, 965, 1146, 1249, 1277, 1501, 1511
HpyF10VI	GCNNNNNNNGC	4 cut(s)	92, 197, 383, 1178
HpyF3I	CTNAG	2 cut(s)	362, 950
HpySE526I	ACGT	3 cut(s)	100, 1148, 1218
Hsp92II	CATG	8 cut(s)	469, 729, 868, 875, 1157, 1253, 1423, 1531
HspAI	GCGC	5 cut(s)	191, 463, 618, 1127, 1129
KpnI	GGTACC	1 cut(s)	1586
KroI	GCCGGC	1 cut(s)	433
KroNI	GCCGGC	1 cut(s)	435
Kzo9I	GATC	6 cut(s)	28, 34, 779, 1198, 1531, 1561
LguI	GCTCTTC	1 cut(s)	1552
LmnI	GCTCC	4 cut(s)	374, 637, 986, 1460
Lsp1109I	GCAGC	5 cut(s)	131, 148, 472, 1115, 1460
LweI	GCATC	5 cut(s)	205, 266, 395, 936, 1520
MaeI	CTAG	3 cut(s)	339, 1416, 1606
MaeII	ACGT	3 cut(s)	100, 1148, 1218
MaeIII	GTNAC	1 cut(s)	502
MalI	GATC	6 cut(s)	30, 36, 781, 1200, 1533, 1563
MbiI	CCGCTC	1 cut(s)	640
MboI	GATC	6 cut(s)	28, 34, 779, 1198, 1531, 1561
MboII	GAAGA	9 cut(s)	344, 464, 655, 719, 923, 986, 1367, 1481, 1539
MflI	RGATCY	2 cut(s)	1198, 1531
MluCI	AATT	9 cut(s)	41, 250, 261, 547, 556, 608, 660, 900, 990
MlyI	GAGTC	3 cut(s)	20, 464, 932
MmeI	TCCRAC	3 cut(s)	4, 352, 810
Mph1103I	ATGCAT	1 cut(s)	1251
MroNI	GCCGGC	1 cut(s)	433
MroXI	GAANNNNTTC	1 cut(s)	1379
MseI	TTAA	9 cut(s)	143, 422, 440, 612, 903, 1038, 1079, 1286, 1337
MslI	CAYNNNNRTG	1 cut(s)	1158
MspI	CCGG	4 cut(s)	238, 390, 434, 1458
MspR9I	CCNGG	2 cut(s)	391, 622
MvaI	CCWGG	1 cut(s)	622
MvnI	CGCG	1 cut(s)	1129
MwoI	GCNNNNNNNGC	4 cut(s)	92, 197, 383, 1178
NaeI	GCCGGC	1 cut(s)	435
NciI	CCSGG	1 cut(s)	391
NdeII	GATC	6 cut(s)	28, 34, 779, 1198, 1531, 1561
NgoMIV	GCCGGC	1 cut(s)	433
NheI	GCTAGC	1 cut(s)	1415
NlaIII	CATG	8 cut(s)	469, 729, 868, 875, 1157, 1253, 1423, 1531
NlaIV	GGNNCC	4 cut(s)	6, 1200, 1476, 1584
NsiI	ATGCAT	1 cut(s)	1251
NspI	RCATGY	2 cut(s)	875, 1423
NspV	TTCGAA	1 cut(s)	747
PaeI	GCATGC	1 cut(s)	875
PaqCI	CACCTGC	1 cut(s)	1454
PauI	GCGCGC	1 cut(s)	1127
PceI	AGGCCT	1 cut(s)	1020
PciSI	GCTCTTC	1 cut(s)	1552
PdiI	GCCGGC	1 cut(s)	435
PdmI	GAANNNNTTC	1 cut(s)	1379
PfeI	GAWTC	4 cut(s)	795, 977, 1358, 1380
PflMI	CCANNNNNTGG	1 cut(s)	692
PkrI	GCNGC	6 cut(s)	121, 138, 163, 462, 1105, 1450
PleI	GAGTC	3 cut(s)	19, 463, 932
PpsI	GAGTC	3 cut(s)	19, 463, 932
Ppu21I	YACGTR	1 cut(s)	1149
PpuMI	RGGWCCY	1 cut(s)	1475
PsiI	TTATAA	1 cut(s)	702
Psp1406I	AACGTT	1 cut(s)	1218
Psp5II	RGGWCCY	1 cut(s)	1475
Psp6I	CCWGG	1 cut(s)	620
PspFI	CCCAGC	1 cut(s)	1229
PspGI	CCWGG	1 cut(s)	620
PspN4I	GGNNCC	4 cut(s)	6, 1200, 1476, 1584
PspPI	GGNCC	5 cut(s)	392, 624, 1317, 1475, 1539
PspPPI	RGGWCCY	1 cut(s)	1475
PsuI	RGATCY	2 cut(s)	1198, 1531
PteI	GCGCGC	1 cut(s)	1127
RsaI	GTAC	5 cut(s)	410, 684, 1115, 1151, 1584
RsaNI	GTAC	5 cut(s)	409, 683, 1114, 1150, 1583
RseI	CAYNNNNRTG	1 cut(s)	1158
SapI	GCTCTTC	1 cut(s)	1552
SaqAI	TTAA	9 cut(s)	143, 422, 440, 612, 903, 1038, 1079, 1286, 1337
SatI	GCNGC	6 cut(s)	120, 137, 162, 461, 1104, 1449
Sau3AI	GATC	6 cut(s)	28, 34, 779, 1198, 1531, 1561
Sau96I	GGNCC	5 cut(s)	392, 624, 1317, 1475, 1539
ScaI	AGTACT	1 cut(s)	1115
SchI	GAGTC	3 cut(s)	20, 464, 932
ScrFI	CCNGG	2 cut(s)	391, 622
SfaNI	GCATC	5 cut(s)	205, 266, 395, 936, 1520
SfcI	CTRYAG	1 cut(s)	888
SfuI	TTCGAA	1 cut(s)	747
SinI	GGWCC	1 cut(s)	1475
SmiMI	CAYNNNNRTG	1 cut(s)	1158
SphI	GCATGC	1 cut(s)	875
Sse9I	AATT	9 cut(s)	41, 250, 261, 547, 556, 608, 660, 900, 990
SseBI	AGGCCT	1 cut(s)	1020
SsiI	CCGC	2 cut(s)	161, 640
SspI	AATATT	2 cut(s)	170, 1312
SspMI	CTAG	3 cut(s)	339, 1416, 1606
StuI	AGGCCT	1 cut(s)	1020
StyD4I	CCNGG	2 cut(s)	389, 620
TaaI	ACNGT	5 cut(s)	62, 148, 588, 1065, 1242
TaiI	ACGT	3 cut(s)	103, 1151, 1221
TaqI	TCGA	5 cut(s)	16, 48, 522, 747, 1365
TasI	AATT	9 cut(s)	41, 250, 261, 547, 556, 608, 660, 900, 990
TatI	WGTACW	1 cut(s)	1113
TauI	GCSGC	1 cut(s)	164
TfiI	GAWTC	4 cut(s)	795, 977, 1358, 1380
Tru1I	TTAA	9 cut(s)	143, 422, 440, 612, 903, 1038, 1079, 1286, 1337
Tru9I	TTAA	9 cut(s)	143, 422, 440, 612, 903, 1038, 1079, 1286, 1337
TscAI	CASTG	3 cut(s)	67, 163, 821
TseI	GCWGC	5 cut(s)	119, 136, 460, 1103, 1448
TspDTI	ATGAA	8 cut(s)	34, 280, 672, 1029, 1104, 1470, 1485, 1516
TspRI	CASTG	3 cut(s)	67, 163, 821
Van91I	CCANNNNNTGG	1 cut(s)	692
VpaK11BI	GGWCC	1 cut(s)	1475
XapI	RAATTY	5 cut(s)	41, 261, 547, 556, 608
XceI	RCATGY	2 cut(s)	875, 1423
XmiI	GTMKAC	1 cut(s)	486
XmnI	GAANNNNTTC	1 cut(s)	1379
XspI	CTAG	3 cut(s)	339, 1416, 1606
ZrmI	AGTACT	1 cut(s)	1115
Zsp2I	ATGCAT	1 cut(s)	1251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.