Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002515

Physical Location & Seq

Genomic Coordinates Reverse (-)

33721479 .. 33738559

Gene Structure 17081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00241460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGGAAATCGAGAAACGAGCGGATGATCCAGGTAGCAAAGGCGTGGAGGACAAATACAATGTTGAAGCCACTGAAAATCAAGCCAACGAAGCGCTGCGTTTGCCTATTACAGAGGCAGCACCCATATATGAGCAGATTCTGACTGTGTTTCCCACTGCAGCAAAATATTGGAAGCAATATGTGGAGGCACAGATTGCTGTAAATAATGATGATGCTACAAAACAGATATTTAGCCGGTGTTTGTTGATTTGTCTTCAAGTTCCACTCTGGCGATGCTACATTCGTTTCATCAGAAAGGTCAATGACAAGAAGGGGTGGAGGGTCAAGAAGAGACTAGAAAAGCTTTTGATTTTATGCTCAGTTATGTTGGAAATACTGAGAGCTGATATAGCGTCTGGGCCTGTGTGGATGGAGTACATCGCTTTTTTAAAGTCGTTACAGGCTGTAAGCACACAGGAAGAGTCGCAACGGATGACTGCTGTGCGGAAAGCATACCAGAGAGCCATTGTTACTCCTACGCATCACATTGAACAACTTTGGAAGGATTATGAAAATTTTGAAAATTCTGTCAGCCGCCATCTGGCAAAAGGACTGTTATCTGAATATCAACCAAAATTTAACAGTGCCAGGGCCGTTTATAGGGAGCGGAAGAAGTACGTTGACGAAATTGACTTGAATATGCTTGCTGTGCCACCAACTGGCTCTTACAAGGCAATTTTCTGCTTCTTGTTAGGGAATCCACAAAGGATAGACAATGGATCATCCAACAAGCGAATTATTTTCACATATGAGCAGTTAGCTTTAGGTGTGTCATGTGTGTTGCGTTTATGCCTTTCCATTAAGTTGGGCTTTATCCTTATGTGCATATTTATGGATTTAAATGGTATCTGGGCTTTAATTGAGTCCTCTTCTAGATCTGATGTTGGTATGGAACATGTATCGGGATGTCTAATGTATCTATACCATTATCCTGATATATGGTATGACTATGCGATGTGGCATGCAAAAAGTGGATCAATAGATGCTGCAATTAAAGTATTTCAGAGAGCATTGAAGGCTCTTCCTGAGCTGGAAGAATCCCGTGGAGCGATTCAGTTGAGTTGCTTGGAAGCGGGATATTCTGCTGTTGCCTTTTCTTTCAACTGTTCTGCCTTTTGCAGCCTACGAAAAAAAATATATGAGAACCTTTTGGGAGATGGTGTTAACACAACAGCCCTTGCTCATATACAGTTTATTCGCTTTTTAAGGAGAACTGAAGGAGTTGAAGCAGCTCGCAAGTACTTTTTAGATGCACGCAAATCCCCAAACTGCACATATCATGTTTATGTTGCTTATGCAATGGTGGCCTTATGTCTTGACAAGGATCCGAAGATGGCACACAATGTTTTTGAAGCTGGGCTGAAACAGTTTATGCACGAGCCTGTATACATTCTTGAATATGCAGATTTTTTAACTCGCTTGAATGATGATAGAAATATTCGGGCCCTGTTTGAAAGGGCATTAAGCTCACTACCACCAGAAAAATCTGTTGAGGTATGGAAACAATTTGCCAAATTTGAGCAAACTTTTGGAGATCTGGCTAGCATGTTGAAGGTTGAACAAAGAAAAAAAGAAGCACTTTCTACAACTGATGAAGAGGGACCTTCATCTTTGGAAAGTTCTTTACAAGAGGTTGTATCTCGATATAGTTTCATGGATCTTTGGCCCTGCTCTACGAAGGATCTGGACCATTTAGCCCGACAAGAGTGGCTTGCTAAAAATATTAATAAGAAAGTGGAGAAGTCAACTATGCTAAGTGGACCTGACTTTGCAGGGGTTGGAAATTTTCAGACCACGACAGTAGCTGGAGTTCTCGCTGCTTCTAGCACCTTGTCAAATCCTGTTGTTGCAGCAGTAGGTGGCCAAACAAGTGCCTTTGATGAAATATTAAAAGTAACACCACCTGCTTTGGTGGCCTTCTTAGCAAATTTACCGATCATTGAAGGTCCAACCCCAGATGTGGATGTTGTGCTATCAATTTGTTTGCAAAGTGATATACCAACACCACAGCCTGCAAAGTCAGGGACTGCCCCTATGCAATTTCCGTCAGTACCTGCTCCTTCTTCTACGAGTGACCTTTCTGTTTCAAGCAAGTCTCATCCCATCCCAAGGAAAGACGATGATGAAACTACAGTCCAGAGCCAGCCACTCCCAACAGATGCTTTCAGGATACGGCAGATCCAGAAGGCTAGCCGTTCTGCTTCGGCTAGCCGCACTGCTTCTCAAACAGGATCAGTTTCGTATGGAAGTGCAATTTCTGGAGATTTATCTGGTAGCACCGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Suf TPR_14

Protein Analysis

774

Amino Acids

86.47

Weight (kDa)

7.47

Isoelectric Point (pI)

45.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suf	PF05843	26 - 266	3.4e-61	Suppressor of forked protein (Suf)
HAT_PRP39_N	PF23240	36 - 184	6.8e-20	PRP39 N-terminal HAT repeat
Suf	PF05843	316 - 575	6e-62	Suppressor of forked protein (Suf)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002515)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17760
fragaria_vesca	FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_6g34990
malus_domestica	MD09G1000100.v1.1
prunus_persica	Prupe.1G353000_v2.0.a1
pyrus_communis	pycom08g21780
rosa_chinensis	RchiOBHm_Chr2g0146051 RchiOBHm_Chr7g0218051
rosa_laevigata	RLG00000002420 RLG00000020181
rosa_multiflora	Rmu_sc0000379.1_g000001 Rmu_sc0009440.1_g000001 Rmu_sc0009440.1_g000003 Rmu_sc0014682.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434850 Rroxscaffold_2G00100320 Rroxscaffold_3G00241460
rosa_rugosa	Rorug07G0173100
rosa_samantha	Rh2AG448900 Rh2BG461300 Rh2CG435900 Rh2DG470500 Rh7AG315500 Rh7BG305800 Rh7CG333000 Rh7DG313800 Rh7DG314300
rosa_wichuraiana	Rw2G036660 Rw7G026650 Rw7G026740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1951
Acc36I	ACCTGC	2 cut(s)	1951, 2101
AccB7I	CCANNNNNTGG	1 cut(s)	698
AccBSI	CCGCTC	2 cut(s)	20, 646
AccI	GTMKAC	1 cut(s)	1425
AciI	CCGC	6 cut(s)	20, 484, 574, 646, 1112, 2251
AclWI	GGATC	9 cut(s)	20, 766, 1021, 1358, 1371, 1704, 1728, 2212, 2278
AcoI	YGGCCR	1 cut(s)	1900
AcsI	RAATTY	6 cut(s)	553, 562, 614, 1553, 1822, 1966
AcuI	CTGAAG	1 cut(s)	1275
AfaI	GTAC	4 cut(s)	416, 656, 1280, 2091
AfeI	AGCGCT	1 cut(s)	93
AfiI	CCNNNNNNNGG	5 cut(s)	580, 639, 698, 1999, 2148
AflIII	ACRYGT	1 cut(s)	934
AjnI	CCWGG	2 cut(s)	28, 626
AluBI	AGCT	8 cut(s)	343, 383, 800, 1069, 1271, 1394, 1506, 1844
AluI	AGCT	8 cut(s)	343, 383, 800, 1069, 1271, 1394, 1506, 1844
Alw26I	GTCTC	2 cut(s)	325, 2139
AlwI	GGATC	9 cut(s)	20, 766, 1021, 1358, 1371, 1704, 1728, 2212, 2278
AlwNI	CAGNNNCTG	4 cut(s)	139, 1844, 2066, 2093
Aor51HI	AGCGCT	1 cut(s)	93
AoxI	GGCC	7 cut(s)	398, 630, 1344, 1482, 1703, 1900, 1953
ApaI	GGGCCC	1 cut(s)	1486
ApeKI	GCWGC	8 cut(s)	94, 116, 158, 1025, 1158, 1268, 1856, 1889
ApoI	RAATTY	6 cut(s)	553, 562, 614, 1553, 1822, 1966
AseI	ATTAAT	1 cut(s)	1764
AspLEI	GCGC	1 cut(s)	94
AspS9I	GGNCC	9 cut(s)	398, 630, 1482, 1483, 1640, 1704, 1726, 1799, 1985
AsuNHI	GCTAGC	3 cut(s)	1580, 2228, 2246
AvaII	GGWCC	4 cut(s)	1640, 1726, 1799, 1985
BaeGI	GKGCMC	1 cut(s)	1486
BalI	TGGCCA	1 cut(s)	1902
BamHI	GGATCC	1 cut(s)	1363
BanII	GRGCYC	1 cut(s)	1486
BauI	CACGAG	1 cut(s)	1415
BbsI	GAAGAC	1 cut(s)	245
BbvI	GCAGC	8 cut(s)	81, 128, 170, 1012, 1170, 1280, 1843, 1901
BccI	CCATC	5 cut(s)	403, 585, 1190, 1366, 2150
BceAI	ACGGC	3 cut(s)	617, 2217, 2228
BciT130I	CCWGG	2 cut(s)	30, 628
BciVI	GTATCC	1 cut(s)	2202
BcoDI	GTCTC	2 cut(s)	325, 2139
BfaI	CTAG	6 cut(s)	335, 912, 1581, 1863, 2229, 2247
BfmI	CTRYAG	2 cut(s)	156, 2169
BfoI	RGCGCY	1 cut(s)	95
BfuAI	ACCTGC	2 cut(s)	1951, 2101
BfuI	GTATCC	1 cut(s)	2202
BglII	AGATCT	2 cut(s)	914, 1573
BmcAI	AGTACT	1 cut(s)	1280
Bme1390I	CCNGG	2 cut(s)	30, 628
Bme18I	GGWCC	4 cut(s)	1640, 1726, 1799, 1985
BmgT120I	GGNCC	9 cut(s)	398, 630, 1482, 1483, 1640, 1704, 1726, 1799, 1985
BmiI	GGNNCC	3 cut(s)	1365, 1484, 1641
BmrFI	CCNGG	2 cut(s)	30, 628
BmsI	GCATC	6 cut(s)	202, 263, 529, 1012, 1279, 2188
BmtI	GCTAGC	3 cut(s)	1584, 2232, 2250
BpiI	GAAGAC	1 cut(s)	245
BpmI	CTGGAG	2 cut(s)	1866, 2319
Bpu10I	CCTNAGC	1 cut(s)	1065
BsaJI	CCNNGG	3 cut(s)	627, 1081, 2147
BsaXI	ACNNNNNCTCC	2 cut(s)	1185, 1215
Bsc4I	CCNNNNNNNGG	5 cut(s)	580, 639, 698, 1999, 2148
Bse118I	RCCGGY	2 cut(s)	234, 2318
Bse1I	ACTGG	1 cut(s)	703
Bse3DI	GCAATG	1 cut(s)	1344
BseBI	CCWGG	2 cut(s)	30, 628
BseDI	CCNNGG	3 cut(s)	627, 1081, 2147
BseGI	GGATG	8 cut(s)	28, 414, 477, 761, 950, 2008, 2137, 2142
BseLI	CCNNNNNNNGG	5 cut(s)	580, 639, 698, 1999, 2148
BseMI	GCAATG	1 cut(s)	1344
BseMII	CTCAG	3 cut(s)	368, 372, 1056
BseNI	ACTGG	1 cut(s)	703
BseSI	GKGCMC	1 cut(s)	1486
BseXI	GCAGC	8 cut(s)	81, 128, 170, 1012, 1170, 1280, 1843, 1901
BseYI	CCCAGC	1 cut(s)	1394
BsgI	GTGCAG	1 cut(s)	1294
BshFI	GGCC	7 cut(s)	400, 632, 1346, 1484, 1705, 1902, 1955
BsiSI	CCGG	2 cut(s)	235, 2319
BslFI	GGGAC	2 cut(s)	1653, 2077
BslI	CCNNNNNNNGG	5 cut(s)	580, 639, 698, 1999, 2148
BsmAI	GTCTC	2 cut(s)	325, 2139
BsmFI	GGGAC	2 cut(s)	1653, 2077
BsnI	GGCC	7 cut(s)	400, 632, 1346, 1484, 1705, 1902, 1955
Bsp120I	GGGCCC	1 cut(s)	1482
Bsp1286I	GDGCHC	1 cut(s)	1486
BspACI	CCGC	6 cut(s)	20, 484, 574, 646, 1112, 2251
BspANI	GGCC	7 cut(s)	400, 632, 1346, 1484, 1705, 1902, 1955
BspCNI	CTCAG	3 cut(s)	369, 371, 1057
BspLI	GGNNCC	3 cut(s)	1365, 1484, 1641
BspMAI	CTGCAG	1 cut(s)	160
BspMI	ACCTGC	2 cut(s)	1951, 2101
BspOI	GCTAGC	3 cut(s)	1584, 2232, 2250
BspPI	GGATC	9 cut(s)	20, 766, 1021, 1358, 1371, 1704, 1728, 2212, 2278
BspQI	GCTCTTC	1 cut(s)	1065
BsrBI	CCGCTC	2 cut(s)	20, 646
BsrDI	GCAATG	1 cut(s)	1344
BsrFI	RCCGGY	2 cut(s)	234, 2318
BsrI	ACTGG	1 cut(s)	703
BssAI	RCCGGY	2 cut(s)	234, 2318
BssECI	CCNNGG	3 cut(s)	627, 1081, 2147
BssNAI	GTATAC	1 cut(s)	1426
BssSI	CACGAG	1 cut(s)	1415
BssT1I	CCWWGG	1 cut(s)	2147
Bst1107I	GTATAC	1 cut(s)	1426
Bst2BI	CACGAG	1 cut(s)	1415
Bst2UI	CCWGG	2 cut(s)	30, 628
Bst4CI	ACNGT	8 cut(s)	145, 594, 623, 1145, 1230, 1407, 1840, 2173
Bst6I	CTCTTC	5 cut(s)	323, 453, 913, 1065, 1629
BstAPI	GCANNNNNTGC	1 cut(s)	194
BstDEI	CTNAG	5 cut(s)	358, 377, 1065, 1793, 1960
BstDSI	CCRYGG	1 cut(s)	1081
BstF5I	GGATG	8 cut(s)	28, 414, 477, 761, 950, 2008, 2137, 2142
BstH2I	RGCGCY	1 cut(s)	95
BstHHI	GCGC	1 cut(s)	94
BstMAI	GTCTC	2 cut(s)	325, 2139
BstMWI	GCNNNNNNNGC	9 cut(s)	89, 100, 194, 389, 688, 1055, 1343, 1952, 1961
BstNI	CCWGG	2 cut(s)	30, 628
BstNSI	RCATGY	3 cut(s)	938, 1004, 1588
BstSCI	CCNGG	2 cut(s)	28, 626
BstSFI	CTRYAG	2 cut(s)	156, 2169
BstSLI	GKGCMC	1 cut(s)	1486
BstV1I	GCAGC	8 cut(s)	81, 128, 170, 1012, 1170, 1280, 1843, 1901
BstV2I	GAAGAC	1 cut(s)	245
BstX2I	RGATCY	6 cut(s)	914, 1363, 1573, 1696, 1720, 2217
BstXI	CCANNNNNNTGG	1 cut(s)	844
BstYI	RGATCY	6 cut(s)	914, 1363, 1573, 1696, 1720, 2217
BstZ17I	GTATAC	1 cut(s)	1426
BsuI	GTATCC	1 cut(s)	2202
BsuRI	GGCC	7 cut(s)	400, 632, 1346, 1484, 1705, 1902, 1955
BtgI	CCRYGG	1 cut(s)	1081
BtgZI	GCGATG	3 cut(s)	286, 403, 1007
BtsCI	GGATG	8 cut(s)	28, 414, 477, 761, 950, 2008, 2137, 2142
BtsI	GCAGTG	2 cut(s)	153, 2253
BtsIMutI	CAGTG	4 cut(s)	69, 153, 628, 2253
BveI	ACCTGC	2 cut(s)	1951, 2101
CaiI	CAGNNNCTG	4 cut(s)	139, 1844, 2066, 2093
CfoI	GCGC	1 cut(s)	94
Cfr10I	RCCGGY	2 cut(s)	234, 2318
Cfr13I	GGNCC	9 cut(s)	398, 630, 1482, 1483, 1640, 1704, 1726, 1799, 1985
CseI	GACGC	1 cut(s)	381
Csp6I	GTAC	4 cut(s)	415, 655, 1279, 2090
CspCI	CAANNNNNGTGG	2 cut(s)	1929, 1964
CviAII	CATG	6 cut(s)	813, 935, 1001, 1319, 1585, 1693
CviQI	GTAC	4 cut(s)	415, 655, 1279, 2090
DdeI	CTNAG	5 cut(s)	358, 377, 1065, 1793, 1960
DraI	TTTAAA	2 cut(s)	429, 879
EaeI	YGGCCR	1 cut(s)	1900
Eam1104I	CTCTTC	5 cut(s)	323, 453, 913, 1065, 1629
EarI	CTCTTC	5 cut(s)	323, 453, 913, 1065, 1629
Eco130I	CCWWGG	1 cut(s)	2147
Eco24I	GRGCYC	1 cut(s)	1486
Eco47I	GGWCC	4 cut(s)	1640, 1726, 1799, 1985
Eco47III	AGCGCT	1 cut(s)	93
Eco57I	CTGAAG	1 cut(s)	1275
EcoO109I	RGGNCCY	2 cut(s)	1483, 1640
EcoRII	CCWGG	2 cut(s)	28, 626
EcoT14I	CCWWGG	1 cut(s)	2147
EcoT38I	GRGCYC	1 cut(s)	1486
ErhI	CCWWGG	1 cut(s)	2147
FaeI	CATG	6 cut(s)	816, 938, 1004, 1322, 1588, 1696
FalI	AAGNNNNNCTT	6 cut(s)	833, 865, 1602, 1634, 1734, 1766
FaqI	GGGAC	2 cut(s)	1653, 2077
FatI	CATG	6 cut(s)	812, 934, 1000, 1318, 1584, 1692
FauI	CCCGC	1 cut(s)	1105
FauNDI	CATATG	1 cut(s)	787
FblI	GTMKAC	1 cut(s)	1425
FokI	GGATG	8 cut(s)	35, 421, 484, 748, 957, 2015, 2124, 2129
FriOI	GRGCYC	1 cut(s)	1486
FspBI	CTAG	6 cut(s)	335, 912, 1581, 1863, 2229, 2247
GlaI	GCGC	1 cut(s)	93
GsaI	CCCAGC	1 cut(s)	1398
GsuI	CTGGAG	2 cut(s)	1866, 2319
HaeII	RGCGCY	1 cut(s)	95
HaeIII	GGCC	7 cut(s)	400, 632, 1346, 1484, 1705, 1902, 1955
HapII	CCGG	2 cut(s)	235, 2319
HgaI	GACGC	1 cut(s)	381
HhaI	GCGC	1 cut(s)	94
Hin1II	CATG	6 cut(s)	816, 938, 1004, 1322, 1588, 1696
Hin6I	GCGC	1 cut(s)	92
HinP1I	GCGC	1 cut(s)	92
HincII	GTYRAC	3 cut(s)	661, 1204, 1785
HindII	GTYRAC	3 cut(s)	661, 1204, 1785
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	6 cut(s)	136, 461, 736, 902, 1076, 1090
HpaI	GTTAAC	1 cut(s)	1204
HpaII	CCGG	2 cut(s)	235, 2319
Hpy166II	GTNNAC	5 cut(s)	661, 1204, 1426, 1785, 1799
Hpy188I	TCNGA	7 cut(s)	141, 293, 601, 919, 1044, 1368, 1830
Hpy8I	GTNNAC	5 cut(s)	661, 1204, 1426, 1785, 1799
HpyCH4III	ACNGT	8 cut(s)	145, 594, 623, 1145, 1230, 1407, 1840, 2173
HpyCH4IV	ACGT	1 cut(s)	657
HpyF10VI	GCNNNNNNNGC	9 cut(s)	89, 100, 194, 389, 688, 1055, 1343, 1952, 1961
HpyF3I	CTNAG	5 cut(s)	358, 377, 1065, 1793, 1960
HpySE526I	ACGT	1 cut(s)	657
Hsp92II	CATG	6 cut(s)	816, 938, 1004, 1322, 1588, 1696
HspAI	GCGC	1 cut(s)	92
KspAI	GTTAAC	1 cut(s)	1204
LguI	GCTCTTC	1 cut(s)	1065
LmnI	GCTCC	3 cut(s)	643, 1085, 2101
Lsp1109I	GCAGC	8 cut(s)	81, 128, 170, 1012, 1170, 1280, 1843, 1901
LweI	GCATC	6 cut(s)	202, 263, 529, 1012, 1279, 2188
MaeI	CTAG	6 cut(s)	335, 912, 1581, 1863, 2229, 2247
MaeII	ACGT	1 cut(s)	657
MaeIII	GTNAC	4 cut(s)	435, 508, 1933, 2111
MbiI	CCGCTC	2 cut(s)	20, 646
MflI	RGATCY	6 cut(s)	914, 1363, 1573, 1696, 1720, 2217
MhlI	GDGCHC	1 cut(s)	1486
MlsI	TGGCCA	1 cut(s)	1902
MluNI	TGGCCA	1 cut(s)	1902
MlyI	GAGTC	2 cut(s)	470, 911
MmeI	TCCRAC	4 cut(s)	348, 789, 1798, 2012
MnlI	CCTC	8 cut(s)	40, 106, 178, 312, 916, 1525, 1630, 1663
Mox20I	TGGCCA	1 cut(s)	1902
MscI	TGGCCA	1 cut(s)	1902
MslI	CAYNNNNRTG	2 cut(s)	869, 1323
Msp20I	TGGCCA	1 cut(s)	1902
MspI	CCGG	2 cut(s)	235, 2319
MspR9I	CCNGG	2 cut(s)	30, 628
MvaI	CCWGG	2 cut(s)	30, 628
MwoI	GCNNNNNNNGC	9 cut(s)	89, 100, 194, 389, 688, 1055, 1343, 1952, 1961
NdeI	CATATG	1 cut(s)	787
NheI	GCTAGC	3 cut(s)	1580, 2228, 2246
NlaIII	CATG	6 cut(s)	816, 938, 1004, 1322, 1588, 1696
NlaIV	GGNNCC	3 cut(s)	1365, 1484, 1641
NmuCI	GTSAC	1 cut(s)	2111
NspI	RCATGY	3 cut(s)	938, 1004, 1588
PaeI	GCATGC	1 cut(s)	1004
PaqCI	CACCTGC	1 cut(s)	1951
PciI	ACATGT	1 cut(s)	934
PciSI	GCTCTTC	1 cut(s)	1065
PfeI	GAWTC	4 cut(s)	136, 736, 1076, 1090
PflMI	CCANNNNNTGG	1 cut(s)	698
PleI	GAGTC	2 cut(s)	469, 910
PpsI	GAGTC	2 cut(s)	469, 910
PpuMI	RGGWCCY	1 cut(s)	1640
PscI	ACATGT	1 cut(s)	934
PshBI	ATTAAT	1 cut(s)	1764
Psp5II	RGGWCCY	1 cut(s)	1640
Psp6I	CCWGG	2 cut(s)	28, 626
PspFI	CCCAGC	1 cut(s)	1394
PspGI	CCWGG	2 cut(s)	28, 626
PspN4I	GGNNCC	3 cut(s)	1365, 1484, 1641
PspOMI	GGGCCC	1 cut(s)	1482
PspPI	GGNCC	9 cut(s)	398, 630, 1482, 1483, 1640, 1704, 1726, 1799, 1985
PspPPI	RGGWCCY	1 cut(s)	1640
PsrI	GAACNNNNNNTAC	2 cut(s)	1833, 1865
PstI	CTGCAG	1 cut(s)	160
PstNI	CAGNNNCTG	4 cut(s)	139, 1844, 2066, 2093
PsuI	RGATCY	6 cut(s)	914, 1363, 1573, 1696, 1720, 2217
RsaI	GTAC	4 cut(s)	416, 656, 1280, 2091
RsaNI	GTAC	4 cut(s)	415, 655, 1279, 2090
RseI	CAYNNNNRTG	2 cut(s)	869, 1323
SapI	GCTCTTC	1 cut(s)	1065
Sau96I	GGNCC	9 cut(s)	398, 630, 1482, 1483, 1640, 1704, 1726, 1799, 1985
ScaI	AGTACT	1 cut(s)	1280
SchI	GAGTC	2 cut(s)	470, 911
ScrFI	CCNGG	2 cut(s)	30, 628
SduI	GDGCHC	1 cut(s)	1486
SfaNI	GCATC	6 cut(s)	202, 263, 529, 1012, 1279, 2188
SfcI	CTRYAG	2 cut(s)	156, 2169
SinI	GGWCC	4 cut(s)	1640, 1726, 1799, 1985
SmiI	ATTTAAAT	1 cut(s)	879
SmiMI	CAYNNNNRTG	2 cut(s)	869, 1323
SphI	GCATGC	1 cut(s)	1004
SsiI	CCGC	6 cut(s)	20, 484, 574, 646, 1112, 2251
SspI	AATATT	4 cut(s)	167, 1477, 1762, 1926
SspMI	CTAG	6 cut(s)	335, 912, 1581, 1863, 2229, 2247
StyD4I	CCNGG	2 cut(s)	28, 626
StyI	CCWWGG	1 cut(s)	2147
SwaI	ATTTAAAT	1 cut(s)	879
TaaI	ACNGT	8 cut(s)	145, 594, 623, 1145, 1230, 1407, 1840, 2173
TaiI	ACGT	1 cut(s)	660
TaqI	TCGA	2 cut(s)	9, 1681
TatI	WGTACW	2 cut(s)	414, 1278
TauI	GCSGC	2 cut(s)	576, 2253
TfiI	GAWTC	4 cut(s)	136, 736, 1076, 1090
TscAI	CASTG	4 cut(s)	76, 160, 628, 2260
TseFI	GTSAC	1 cut(s)	2111
TseI	GCWGC	8 cut(s)	94, 116, 158, 1025, 1158, 1268, 1856, 1889
Tsp45I	GTSAC	1 cut(s)	2111
TspDTI	ATGAA	7 cut(s)	277, 564, 1635, 1647, 1681, 1935, 2178
TspGWI	ACGGA	2 cut(s)	484, 2073
TspRI	CASTG	4 cut(s)	76, 160, 628, 2260
Van91I	CCANNNNNTGG	1 cut(s)	698
VpaK11BI	GGWCC	4 cut(s)	1640, 1726, 1799, 1985
VspI	ATTAAT	1 cut(s)	1764
XapI	RAATTY	6 cut(s)	553, 562, 614, 1553, 1822, 1966
XbaI	TCTAGA	1 cut(s)	911
XceI	RCATGY	3 cut(s)	938, 1004, 1588
XmiI	GTMKAC	1 cut(s)	1425
XspI	CTAG	6 cut(s)	335, 912, 1581, 1863, 2229, 2247
ZrmI	AGTACT	1 cut(s)	1280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.