Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0002515

Physical Location & Seq

Genomic Coordinates Forward (+)

36913092 .. 36934943

Gene Structure 21852 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG333000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGAAATCGAGAAACAAGCGGATGATCCAGGTAGCAAAGCCATGGAGGACAAATACAATGTTGAAGCCACTGAAAATCAAGCCAACGAAGCGCTGCGTTTGCCTATTACAGAGGCAGCACCCATATATGAGCAGATTCTGACTGTGTTTCCCACTGCAGCAAAATATTGGAAGCAATATGTGGAGGCACAGATTGCTGTAAATAATGATGATGCTACAAAACAGATATTTAGCCGGTGTTTGTTGATTTGTCTTCAAGTTCCACTCTGGCGGTGCTACATTCGTTTCATCAGAAAGGTCAATGACAAGAAGGGGGTGGAGGGTCAAGAAGAGACTAGAAAAGCTTTTGATTTTATGCTCAGTTATGTTGGAGCTGATATAGCGTCTGGGCCTGTGTGGATGGAGTACATCGCTTTTTTAAAGTCGTTACAGGCTGTAAGCACACAGGAAGAGTCGCAACGGATGACTGCTGTGCGGAAAGCATACCAGAGAGCCATTGTTACTCCTACGCATCACATTGAACAACTTTGGAAGGATTATGAAAATTTTGAAAATTCTGTCAGCCGCCATCTGGCAAAAGGACTGTTATCTGAATATCAACCAAAATTTAACAGTGCCAGGGCCGTTTATAGGGAGCGGAAGAAGTACGTTGACGAAATTGACTTGAATATGCTTGCTGTGCCACCAACTGGCTCTTACAAGGAAGAACTGCAGTGGATGGTGTGGAAAAAGTTGCTGGGTTTTGAAAAAGGGAATCCACAAAGGATAGACAATGGATCATCCAACAAGCGAATTATTTTCACATATGAGCAGTGTCTAATGTATCTATACCATTATCCTGATATATGGTATGACTATGCGATGTGGCATGCAAAAAGTGGATCAATAGATGCTGCAATTAAAGTATTTCAGAGAGCATTGAAGGCTCTTCCTGACTCAGAGATGCTTAGATATGCGTATGCAGAGCTGGAAGAATCCCGTGGAGCGATTCAGCCTACGAAAAAAATATATGAGAACCTTTTGGGAGACGGTGTTAACACAACAGCCCTTGCTCATATACAGTTTATTCGCTTTTTAAGGAGAACTGAAGGAGTTGAAGCAGCTCGCAAGTACTTTTTAGATGCACGCAAATCCCCAAACTGCACATATCATGTTTATGTTGCTTATGCAATGGTGGCCTTATGTCTTGACAAGGATCCCAAGATGGCACACAATGTTTTTGAAGCTGGGCTGAAACAGTTTATGCACGAGCCTGTATACATTCTTGAATATGCAGATTTTTTAACTCGCTTGAATGATGATAGAAATATTCGGGCCCTGTTTGAAAGGGCATTAAGCTCACTACCACCAGAAAAATCTGTTGAGGTATGGAAACAATTTGCCAAATTTGAGCAAACTTTTGGAGATCTGGCTAGCATGTTGAAGGTTGAGCAAAGAAAAAAAGAAGCACTTTCTACAACTGATGAAGAGGGACCTTCATCTTTGGAAAGTTCTTTACAAGAGGTTGTATCTCGATATAGTTTCATGGATCTTTGGCCCTGCTCTACGAAGGATCTGGACCATTTAGCCCGACAAGAGTGGCTTGCTAAAAATATTAATAAGAAAGTGGAGAAGTCAACTATGCTAAGTGGACCTGACTTTGCAGACAAGGGTTCTACTGGCCTGATAAGCAATTCATCAGTGTCTGCAAAAGTAGTTTATCCAGATACTAATCAAATGGTTATCTATGATCCAAGGCAAAAACCTGGGGTTGGAAATTTTCAGACCACAACAGTAGCTGGAGTTCTTGCTGCTTCTAGCACCTTGTCAAATCCTGTTGTTGCAGCAGTAGGTGGCCAAACAAGTGCCTTTGATGAAATATTAAAAGTAACACCACCTGCTTTGGTGGCCTTCTTAGCAAATTTACCGATCATTGAAGGTCCAACCCCAGATGTGGATGTTGTGCTATCAATTTGTTTGCAAAGTGATATACCAACACCACAGCCTGCAAAGTCAGGGACTGCCCCTATGCAATTTCCGTCAGTACCTGCTCCTTCTTCTATGAGTGACCTTTCTGTTTCAAGCAAGTCTCATCCCATCCCTAGTGGGTCATCTTTCAAGCCAACCAGGGGGAAACGAAAAAATATAGATAGGAAAGACGATGATGAAACTACAGTCCAGAGCCAGCCACTCCCAACAGATGCTTTCAGGATACGGCAGATCCAGAAGGCTAGCCGTTCTGCTTCGGCTAGCCGCACTGCTTCTCAAACAGGATCAGTTTCGTATGGAAGTGCAATTTCTGGAGATTTATCTGGTAGCACCAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Suf TPR_14

Protein Analysis

768

Amino Acids

86.18

Weight (kDa)

6.86

Isoelectric Point (pI)

45.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suf	PF05843	16 - 519	2.2e-159	Suppressor of forked protein (Suf)
HAT_PRP39_N	PF23240	36 - 181	1.3e-25	PRP39 N-terminal HAT repeat
HAT_PRP39_C	PF23241	235 - 361	2.1e-21	PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	241 - 327	4.3e-07	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
TPR_14	PF13428	280 - 323	1.9e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002515)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17760
fragaria_vesca	FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_6g34990
malus_domestica	MD09G1000100.v1.1
prunus_persica	Prupe.1G353000_v2.0.a1
pyrus_communis	pycom08g21780
rosa_chinensis	RchiOBHm_Chr2g0146051 RchiOBHm_Chr7g0218051
rosa_laevigata	RLG00000002420 RLG00000020181
rosa_multiflora	Rmu_sc0000379.1_g000001 Rmu_sc0009440.1_g000001 Rmu_sc0009440.1_g000003 Rmu_sc0014682.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434850 Rroxscaffold_2G00100320 Rroxscaffold_3G00241460
rosa_rugosa	Rorug07G0173100
rosa_samantha	Rh2AG448900 Rh2BG461300 Rh2CG435900 Rh2DG470500 Rh7AG315500 Rh7BG305800 Rh7CG333000 Rh7DG313800 Rh7DG314300
rosa_wichuraiana	Rw2G036660 Rw7G026650 Rw7G026740

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1885
Acc36I	ACCTGC	2 cut(s)	1885, 2035
AccB7I	CCANNNNNTGG	1 cut(s)	689
AccBSI	CCGCTC	1 cut(s)	637
AccI	GTMKAC	1 cut(s)	1257
AciI	CCGC	6 cut(s)	20, 271, 475, 565, 637, 2233
AcoI	YGGCCR	1 cut(s)	1834
AcsI	RAATTY	6 cut(s)	544, 553, 605, 1385, 1756, 1900
AcuI	CTGAAG	1 cut(s)	1107
AfaI	GTAC	4 cut(s)	407, 647, 1112, 2025
AfeI	AGCGCT	1 cut(s)	93
AfiI	CCNNNNNNNGG	6 cut(s)	571, 630, 689, 1751, 1933, 2108
AjnI	CCWGG	4 cut(s)	28, 617, 1744, 2105
AluBI	AGCT	8 cut(s)	344, 374, 967, 1103, 1226, 1338, 1778, 2304
AluI	AGCT	8 cut(s)	344, 374, 967, 1103, 1226, 1338, 1778, 2304
Alw26I	GTCTC	3 cut(s)	326, 1020, 2073
AlwNI	CAGNNNCTG	5 cut(s)	139, 1685, 1778, 2000, 2027
Aor51HI	AGCGCT	1 cut(s)	93
AoxI	GGCC	8 cut(s)	389, 621, 1176, 1314, 1535, 1660, 1834, 1887
ApaI	GGGCCC	1 cut(s)	1318
ApeKI	GCWGC	7 cut(s)	94, 116, 158, 893, 1100, 1790, 1823
ApoI	RAATTY	6 cut(s)	544, 553, 605, 1385, 1756, 1900
AseI	ATTAAT	1 cut(s)	1596
AspLEI	GCGC	1 cut(s)	94
AspS9I	GGNCC	9 cut(s)	389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
AsuNHI	GCTAGC	3 cut(s)	1412, 2210, 2228
AvaII	GGWCC	4 cut(s)	1472, 1558, 1631, 1919
BaeGI	GKGCMC	1 cut(s)	1318
BalI	TGGCCA	1 cut(s)	1836
BamHI	GGATCC	1 cut(s)	1195
BanII	GRGCYC	1 cut(s)	1318
BauI	CACGAG	1 cut(s)	1247
BbsI	GAAGAC	1 cut(s)	245
BbvI	GCAGC	7 cut(s)	81, 128, 170, 880, 1112, 1777, 1835
BccI	CCATC	5 cut(s)	394, 576, 712, 1198, 2084
BceAI	ACGGC	3 cut(s)	608, 2199, 2210
BciT130I	CCWGG	4 cut(s)	30, 619, 1746, 2107
BciVI	GTATCC	1 cut(s)	2184
BcoDI	GTCTC	3 cut(s)	326, 1020, 2073
BfaI	CTAG	6 cut(s)	336, 1413, 1797, 2082, 2211, 2229
BfmI	CTRYAG	3 cut(s)	156, 710, 2151
BfoI	RGCGCY	1 cut(s)	95
BfuAI	ACCTGC	2 cut(s)	1885, 2035
BfuI	GTATCC	1 cut(s)	2184
BglII	AGATCT	1 cut(s)	1405
BisI	GCNGC	9 cut(s)	95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
BlsI	GCNGC	9 cut(s)	96, 118, 160, 566, 895, 1102, 1792, 1825, 2234
BmcAI	AGTACT	1 cut(s)	1112
Bme1390I	CCNGG	4 cut(s)	30, 619, 1746, 2107
Bme18I	GGWCC	4 cut(s)	1472, 1558, 1631, 1919
BmgT120I	GGNCC	9 cut(s)	389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
BmiI	GGNNCC	3 cut(s)	1197, 1316, 1473
BmrFI	CCNGG	4 cut(s)	30, 619, 1746, 2107
BmsI	GCATC	6 cut(s)	202, 520, 880, 933, 1111, 2170
BmtI	GCTAGC	3 cut(s)	1416, 2214, 2232
BpiI	GAAGAC	1 cut(s)	245
BpmI	CTGGAG	2 cut(s)	1800, 2301
BsaBI	GATNNNNATC	1 cut(s)	1710
BsaJI	CCNNGG	6 cut(s)	42, 618, 979, 1733, 1745, 2106
BsaXI	ACNNNNNCTCC	2 cut(s)	1017, 1047
Bsc4I	CCNNNNNNNGG	6 cut(s)	571, 630, 689, 1751, 1933, 2108
Bse118I	RCCGGY	1 cut(s)	234
Bse1I	ACTGG	2 cut(s)	694, 1663
Bse3DI	GCAATG	1 cut(s)	1176
Bse8I	GATNNNNATC	1 cut(s)	1710
BseBI	CCWGG	4 cut(s)	30, 619, 1746, 2107
BseDI	CCNNGG	6 cut(s)	42, 618, 979, 1733, 1745, 2106
BseGI	GGATG	8 cut(s)	28, 405, 468, 723, 779, 1942, 2071, 2076
BseJI	GATNNNNATC	1 cut(s)	1710
BseLI	CCNNNNNNNGG	6 cut(s)	571, 630, 689, 1751, 1933, 2108
BseMI	GCAATG	1 cut(s)	1176
BseMII	CTCAG	2 cut(s)	373, 951
BseNI	ACTGG	2 cut(s)	694, 1663
BseSI	GKGCMC	1 cut(s)	1318
BseXI	GCAGC	7 cut(s)	81, 128, 170, 880, 1112, 1777, 1835
BseYI	CCCAGC	2 cut(s)	736, 1226
BsgI	GTGCAG	1 cut(s)	1126
BshFI	GGCC	8 cut(s)	391, 623, 1178, 1316, 1537, 1662, 1836, 1889
BsiSI	CCGG	1 cut(s)	235
BslFI	GGGAC	2 cut(s)	1485, 2011
BslI	CCNNNNNNNGG	6 cut(s)	571, 630, 689, 1751, 1933, 2108
BsmAI	GTCTC	3 cut(s)	326, 1020, 2073
BsmBI	CGTCTC	1 cut(s)	1020
BsmFI	GGGAC	2 cut(s)	1485, 2011
BsnI	GGCC	8 cut(s)	391, 623, 1178, 1316, 1537, 1662, 1836, 1889
Bsp120I	GGGCCC	1 cut(s)	1314
Bsp1286I	GDGCHC	1 cut(s)	1318
Bsp19I	CCATGG	1 cut(s)	42
BspACI	CCGC	6 cut(s)	20, 271, 475, 565, 637, 2233
BspANI	GGCC	8 cut(s)	391, 623, 1178, 1316, 1537, 1662, 1836, 1889
BspCNI	CTCAG	2 cut(s)	372, 950
BspLI	GGNNCC	3 cut(s)	1197, 1316, 1473
BspMAI	CTGCAG	2 cut(s)	160, 714
BspMI	ACCTGC	2 cut(s)	1885, 2035
BspOI	GCTAGC	3 cut(s)	1416, 2214, 2232
BspQI	GCTCTTC	1 cut(s)	933
BsrBI	CCGCTC	1 cut(s)	637
BsrDI	GCAATG	1 cut(s)	1176
BsrFI	RCCGGY	1 cut(s)	234
BsrI	ACTGG	2 cut(s)	694, 1663
BssAI	RCCGGY	1 cut(s)	234
BssECI	CCNNGG	6 cut(s)	42, 618, 979, 1733, 1745, 2106
BssNAI	GTATAC	1 cut(s)	1258
BssSI	CACGAG	1 cut(s)	1247
BssT1I	CCWWGG	2 cut(s)	42, 1733
Bst1107I	GTATAC	1 cut(s)	1258
Bst2BI	CACGAG	1 cut(s)	1247
Bst2UI	CCWGG	4 cut(s)	30, 619, 1746, 2107
Bst4CI	ACNGT	8 cut(s)	145, 585, 614, 1031, 1062, 1239, 1774, 2155
Bst6I	CTCTTC	4 cut(s)	324, 444, 933, 1461
BstAPI	GCANNNNNTGC	1 cut(s)	194
BstDEI	CTNAG	5 cut(s)	359, 937, 947, 1625, 1894
BstDSI	CCRYGG	2 cut(s)	42, 979
BstF5I	GGATG	8 cut(s)	28, 405, 468, 723, 779, 1942, 2071, 2076
BstH2I	RGCGCY	1 cut(s)	95
BstHHI	GCGC	1 cut(s)	94
BstMAI	GTCTC	3 cut(s)	326, 1020, 2073
BstNI	CCWGG	4 cut(s)	30, 619, 1746, 2107
BstNSI	RCATGY	2 cut(s)	872, 1420
BstSCI	CCNGG	4 cut(s)	28, 617, 1744, 2105
BstSFI	CTRYAG	3 cut(s)	156, 710, 2151
BstSLI	GKGCMC	1 cut(s)	1318
BstV1I	GCAGC	7 cut(s)	81, 128, 170, 880, 1112, 1777, 1835
BstV2I	GAAGAC	1 cut(s)	245
BstX2I	RGATCY	5 cut(s)	1195, 1405, 1528, 1552, 2199
BstYI	RGATCY	5 cut(s)	1195, 1405, 1528, 1552, 2199
BstZ17I	GTATAC	1 cut(s)	1258
BsuI	GTATCC	1 cut(s)	2184
BsuRI	GGCC	8 cut(s)	391, 623, 1178, 1316, 1537, 1662, 1836, 1889
BtgI	CCRYGG	2 cut(s)	42, 979
BtgZI	GCGATG	2 cut(s)	394, 875
BtsCI	GGATG	8 cut(s)	28, 405, 468, 723, 779, 1942, 2071, 2076
BtsI	GCAGTG	4 cut(s)	153, 719, 818, 2235
BtsIMutI	CAGTG	7 cut(s)	69, 153, 619, 719, 818, 1686, 2235
BveI	ACCTGC	2 cut(s)	1885, 2035
CaiI	CAGNNNCTG	5 cut(s)	139, 1685, 1778, 2000, 2027
CfoI	GCGC	1 cut(s)	94
Cfr10I	RCCGGY	1 cut(s)	234
Cfr13I	GGNCC	9 cut(s)	389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
CseI	GACGC	1 cut(s)	372
Csp6I	GTAC	4 cut(s)	406, 646, 1111, 2024
CspCI	CAANNNNNGTGG	2 cut(s)	1863, 1898
CviAII	CATG	5 cut(s)	43, 869, 1151, 1417, 1525
CviQI	GTAC	4 cut(s)	406, 646, 1111, 2024
DdeI	CTNAG	5 cut(s)	359, 937, 947, 1625, 1894
DraI	TTTAAA	1 cut(s)	420
EaeI	YGGCCR	1 cut(s)	1834
Eam1104I	CTCTTC	4 cut(s)	324, 444, 933, 1461
EarI	CTCTTC	4 cut(s)	324, 444, 933, 1461
Eco130I	CCWWGG	2 cut(s)	42, 1733
Eco24I	GRGCYC	1 cut(s)	1318
Eco47I	GGWCC	4 cut(s)	1472, 1558, 1631, 1919
Eco47III	AGCGCT	1 cut(s)	93
Eco57I	CTGAAG	1 cut(s)	1107
EcoO109I	RGGNCCY	2 cut(s)	1315, 1472
EcoRII	CCWGG	4 cut(s)	28, 617, 1744, 2105
EcoT14I	CCWWGG	2 cut(s)	42, 1733
EcoT38I	GRGCYC	1 cut(s)	1318
ErhI	CCWWGG	2 cut(s)	42, 1733
Esp3I	CGTCTC	1 cut(s)	1020
FaeI	CATG	5 cut(s)	46, 872, 1154, 1420, 1528
FalI	AAGNNNNNCTT	4 cut(s)	1434, 1466, 1566, 1598
FaqI	GGGAC	2 cut(s)	1485, 2011
FatI	CATG	5 cut(s)	42, 868, 1150, 1416, 1524
FauNDI	CATATG	1 cut(s)	805
FblI	GTMKAC	1 cut(s)	1257
Fnu4HI	GCNGC	9 cut(s)	95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
FokI	GGATG	8 cut(s)	35, 412, 475, 730, 766, 1949, 2058, 2063
FriOI	GRGCYC	1 cut(s)	1318
Fsp4HI	GCNGC	9 cut(s)	95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
FspBI	CTAG	6 cut(s)	336, 1413, 1797, 2082, 2211, 2229
GlaI	GCGC	1 cut(s)	93
GluI	GCNGC	9 cut(s)	95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
GsaI	CCCAGC	2 cut(s)	740, 1230
GsuI	CTGGAG	2 cut(s)	1800, 2301
HaeII	RGCGCY	1 cut(s)	95
HaeIII	GGCC	8 cut(s)	391, 623, 1178, 1316, 1537, 1662, 1836, 1889
HapII	CCGG	1 cut(s)	235
HgaI	GACGC	1 cut(s)	372
HhaI	GCGC	1 cut(s)	94
Hin1II	CATG	5 cut(s)	46, 872, 1154, 1420, 1528
Hin6I	GCGC	1 cut(s)	92
HinP1I	GCGC	1 cut(s)	92
HincII	GTYRAC	3 cut(s)	652, 1036, 1617
HindII	GTYRAC	3 cut(s)	652, 1036, 1617
HindIII	AAGCTT	1 cut(s)	342
HinfI	GANTC	6 cut(s)	136, 452, 754, 935, 974, 988
HpaI	GTTAAC	1 cut(s)	1036
HpaII	CCGG	1 cut(s)	235
Hpy166II	GTNNAC	5 cut(s)	652, 1036, 1258, 1617, 1631
Hpy188I	TCNGA	6 cut(s)	141, 293, 592, 912, 940, 1764
Hpy8I	GTNNAC	5 cut(s)	652, 1036, 1258, 1617, 1631
HpyCH4III	ACNGT	8 cut(s)	145, 585, 614, 1031, 1062, 1239, 1774, 2155
HpyCH4IV	ACGT	1 cut(s)	648
HpyF3I	CTNAG	5 cut(s)	359, 937, 947, 1625, 1894
HpySE526I	ACGT	1 cut(s)	648
Hsp92II	CATG	5 cut(s)	46, 872, 1154, 1420, 1528
HspAI	GCGC	1 cut(s)	92
KspAI	GTTAAC	1 cut(s)	1036
LguI	GCTCTTC	1 cut(s)	933
LmnI	GCTCC	4 cut(s)	371, 634, 983, 2035
Lsp1109I	GCAGC	7 cut(s)	81, 128, 170, 880, 1112, 1777, 1835
LweI	GCATC	6 cut(s)	202, 520, 880, 933, 1111, 2170
MaeI	CTAG	6 cut(s)	336, 1413, 1797, 2082, 2211, 2229
MaeII	ACGT	1 cut(s)	648
MaeIII	GTNAC	4 cut(s)	426, 499, 1867, 2045
MbiI	CCGCTC	1 cut(s)	637
MboII	GAAGA	9 cut(s)	245, 341, 461, 652, 716, 920, 983, 1478, 2028
MflI	RGATCY	5 cut(s)	1195, 1405, 1528, 1552, 2199
MhlI	GDGCHC	1 cut(s)	1318
MlsI	TGGCCA	1 cut(s)	1836
MluNI	TGGCCA	1 cut(s)	1836
MlyI	GAGTC	2 cut(s)	461, 929
MmeI	TCCRAC	4 cut(s)	349, 807, 1732, 1946
MnlI	CCTC	7 cut(s)	40, 106, 178, 313, 1357, 1462, 1495
Mox20I	TGGCCA	1 cut(s)	1836
MscI	TGGCCA	1 cut(s)	1836
MseI	TTAA	9 cut(s)	419, 609, 900, 1035, 1076, 1283, 1334, 1596, 1862
MslI	CAYNNNNRTG	1 cut(s)	1155
Msp20I	TGGCCA	1 cut(s)	1836
MspI	CCGG	1 cut(s)	235
MspR9I	CCNGG	4 cut(s)	30, 619, 1746, 2107
MvaI	CCWGG	4 cut(s)	30, 619, 1746, 2107
NcoI	CCATGG	1 cut(s)	42
NdeI	CATATG	1 cut(s)	805
NheI	GCTAGC	3 cut(s)	1412, 2210, 2228
NlaIII	CATG	5 cut(s)	46, 872, 1154, 1420, 1528
NlaIV	GGNNCC	3 cut(s)	1197, 1316, 1473
NmuCI	GTSAC	1 cut(s)	2045
NspI	RCATGY	2 cut(s)	872, 1420
PaeI	GCATGC	1 cut(s)	872
PaqCI	CACCTGC	1 cut(s)	1885
PciSI	GCTCTTC	1 cut(s)	933
PfeI	GAWTC	4 cut(s)	136, 754, 974, 988
PflMI	CCANNNNNTGG	1 cut(s)	689
PkrI	GCNGC	9 cut(s)	96, 118, 160, 566, 895, 1102, 1792, 1825, 2234
PleI	GAGTC	2 cut(s)	460, 929
PpsI	GAGTC	2 cut(s)	460, 929
PpuMI	RGGWCCY	1 cut(s)	1472
PshBI	ATTAAT	1 cut(s)	1596
Psp5II	RGGWCCY	1 cut(s)	1472
Psp6I	CCWGG	4 cut(s)	28, 617, 1744, 2105
PspFI	CCCAGC	2 cut(s)	736, 1226
PspGI	CCWGG	4 cut(s)	28, 617, 1744, 2105
PspN4I	GGNNCC	3 cut(s)	1197, 1316, 1473
PspOMI	GGGCCC	1 cut(s)	1314
PspPI	GGNCC	9 cut(s)	389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
PspPPI	RGGWCCY	1 cut(s)	1472
PsrI	GAACNNNNNNTAC	2 cut(s)	1767, 1799
PstI	CTGCAG	2 cut(s)	160, 714
PstNI	CAGNNNCTG	5 cut(s)	139, 1685, 1778, 2000, 2027
PsuI	RGATCY	5 cut(s)	1195, 1405, 1528, 1552, 2199
RsaI	GTAC	4 cut(s)	407, 647, 1112, 2025
RsaNI	GTAC	4 cut(s)	406, 646, 1111, 2024
RseI	CAYNNNNRTG	1 cut(s)	1155
SapI	GCTCTTC	1 cut(s)	933
SaqAI	TTAA	9 cut(s)	419, 609, 900, 1035, 1076, 1283, 1334, 1596, 1862
SatI	GCNGC	9 cut(s)	95, 117, 159, 565, 894, 1101, 1791, 1824, 2233
Sau96I	GGNCC	9 cut(s)	389, 621, 1314, 1315, 1472, 1536, 1558, 1631, 1919
ScaI	AGTACT	1 cut(s)	1112
SchI	GAGTC	2 cut(s)	461, 929
ScrFI	CCNGG	4 cut(s)	30, 619, 1746, 2107
SduI	GDGCHC	1 cut(s)	1318
SfaNI	GCATC	6 cut(s)	202, 520, 880, 933, 1111, 2170
SfcI	CTRYAG	3 cut(s)	156, 710, 2151
SinI	GGWCC	4 cut(s)	1472, 1558, 1631, 1919
SmiMI	CAYNNNNRTG	1 cut(s)	1155
SphI	GCATGC	1 cut(s)	872
SsiI	CCGC	6 cut(s)	20, 271, 475, 565, 637, 2233
SspI	AATATT	4 cut(s)	167, 1309, 1594, 1860
SspMI	CTAG	6 cut(s)	336, 1413, 1797, 2082, 2211, 2229
StyD4I	CCNGG	4 cut(s)	28, 617, 1744, 2105
StyI	CCWWGG	2 cut(s)	42, 1733
TaaI	ACNGT	8 cut(s)	145, 585, 614, 1031, 1062, 1239, 1774, 2155
TaiI	ACGT	1 cut(s)	651
TaqI	TCGA	2 cut(s)	9, 1513
TatI	WGTACW	2 cut(s)	405, 1110
TauI	GCSGC	2 cut(s)	567, 2235
TfiI	GAWTC	4 cut(s)	136, 754, 974, 988
Tru1I	TTAA	9 cut(s)	419, 609, 900, 1035, 1076, 1283, 1334, 1596, 1862
Tru9I	TTAA	9 cut(s)	419, 609, 900, 1035, 1076, 1283, 1334, 1596, 1862
TscAI	CASTG	7 cut(s)	76, 160, 619, 719, 818, 1686, 2242
TseFI	GTSAC	1 cut(s)	2045
TseI	GCWGC	7 cut(s)	94, 116, 158, 893, 1100, 1790, 1823
Tsp45I	GTSAC	1 cut(s)	2045
TspDTI	ATGAA	8 cut(s)	277, 555, 1467, 1479, 1513, 1665, 1869, 2160
TspGWI	ACGGA	2 cut(s)	475, 2007
TspRI	CASTG	7 cut(s)	76, 160, 619, 719, 818, 1686, 2242
Van91I	CCANNNNNTGG	1 cut(s)	689
VpaK11BI	GGWCC	4 cut(s)	1472, 1558, 1631, 1919
VspI	ATTAAT	1 cut(s)	1596
XapI	RAATTY	6 cut(s)	544, 553, 605, 1385, 1756, 1900
XceI	RCATGY	2 cut(s)	872, 1420
XmiI	GTMKAC	1 cut(s)	1257
XspI	CTAG	6 cut(s)	336, 1413, 1797, 2082, 2211, 2229
ZrmI	AGTACT	1 cut(s)	1112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.