Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0002515

Physical Location & Seq

Genomic Coordinates Forward (+)

35460340 .. 35484719

Gene Structure 24380 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG315500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGAAATCGAGAAACGAGCGGATGATCCAGGTAGCAAAGCCATGGAGGACAAATACAATGTTGAAGCCACTGAAAATCAAGCCAACGAAGCGCTGCGTTTGCCTATTACAGAGGCAGCACCCATATATGAGCAGATTCTGACTGTGTTTCCCACTGCAGCAAAATATTGGAAGCAATATGTGGAGGCACAGATTGCTGTAAATAATGATGATGCTACAAAACAGATATTTAGCCGGTGTTTGTTGATTTGTCTTCAAGTTCCACTCTGGCGATGCTACATTCGTTTCATCAGAAAGGTCAATGACAAGAAGGGGGTGGAGGGTCAAGAAGAGACTAGAAAAGCTTTTGATTTTATGCTCAGTTATGTTGGAGCTGATATAGCGTCTGGGCCTGTGTGGATGGAGTACATCGCTTTTTTAAAGTCGTTACAGGCTGTAAGCACACAGGAAGAGTCGCAACGGATGACTGCTGTGCGGAAAGCATACCAGAGAGCCATTGTTACTCCTACGCATCACATTGAACAACTTTGGAAGGATTATGAAAATTTTGAAAATTCTGTTAGCCGCCATCTGGCAAAAGGACTGTTATCTGAATATCAACCAAAATTTAACAGTGCCAGGGCCGTTTATAGGGAGCGGAAGAAGTACGTTGACGAAATTGACTTGAATATGCTTGCTGTGCCACCAACTGGCTCTTACAAGGAAGAACTGCAGTGGATGGCGTGGAAAAAGTTGCTGGGTTTTGAAAAAGGGAATCCACAAAGGATAGACAATGGATCATCCAACAAGCGAATTATTTTCACATATGAGCAGTGTCTAATGTATCTATACCATTATCCTGATATATGGCTCTTCCTGCCTACGAAAAAAATATATGAGAACCTTTTGGGAGACGGTGTTAACACAACAGCCCTTGCTCATATACAGTTTATTCGCTTTTTAAGGAGAACTGAAGGAGTTGAAGCAGCTCGCAAGTACTTTTTAGATGCACGCAAATCCCCAAACTGCACATATCATGTTTATGTTGCTTATGCAATGGTGGCCTTATGTCTTGACAAGGATCCCAAGATGGCACACAATGTTTTTGAAGCTGGGCTGAAACAGTTTATGCACGAGCCTGTATACATTCTTGAATATGCAGATTTTTTAACTCGCTTGAATGATGATAGAAATATTCGGGCCCTGTTTGAAAGGGCATTAAGCTCTCTACCACCTGAAAAATCTGTTGAGGTATGGAAACAATTTGCCAAATTTGAGCAAACTTTTGGAGATCTGGCTAGCATGTTGAAGGTTGAGCAAAGAAAAAAAGAAGCACTTTCTACAACTGATGAAGAGGGGCCTTCATCTTTGGAAAGTTCTTTACAAGAGGTTGTATCTCGATATAGTTTCATGGATCTTTGGCCCTGCTCTACGAAGGATCTGGACCATTTAGCCCGACAAGAGTGGCTTGCTAAAAATATTAATAAGAAAGTGGAGAAGTCAACTATGCTAAGTGGACCTGACTTTGCAGACAAGGGTTCTACTGGCCTGATAAGCAATTCATCAGTGTCTGCAAAAGTAGTTTATCCAGATACTAATCAAATGGTTATCTATGATCCAAGGCAAAAACCTGGGGTTGGAAATTTTCAGACCACAACAGTAGCTGGAGTTCTTGCTGCTTCTAGCACCTTGTCAAATCCTGTTGTTGCAGCAGTAGGTGGCCAAACAAGTGCCTTTGATGAAATATTAAAAGTAACACCACCTGCTTTGGTGGCCTTCTTAGCAAATTTACCGATCATTGAAGGTCCAACCCCAGATGTGGATGTTGTGCTATCAATTTGTTTGCAAAGTGATATACCAACACCACAGCCTGCAAAGTCAGGGACTGCCCCTATGCAATTTCCGTCAGTACCTGCTCCTTCTTCTACGAGTGACCTTTCTGTTTCAAGCAAGTCTCATCCCATCCCTAGTGGGTCATCTTTCAAGCCAACCAGGGGGAAACGAAAAAATATAGATAGGAAAGACGATGATGAAACTACAGTCCAGAGCCAGCCACTCCCAACAGATGCTTTCAGGATACGGCAGATCCAGAAGGCTAGCCGTTCTGCTTCGGCTAGCCGCACTGCTTCTCAAACAGGATCAGTTTCGTATGGAAGTGCAATTTCTGGAGATTTATCTGGTAGCACCGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Suf TPR_14

Protein Analysis

723

Amino Acids

81.05

Weight (kDa)

7.54

Isoelectric Point (pI)

44.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suf	PF05843	16 - 284	2.7e-87	Suppressor of forked protein (Suf)
HAT_PRP39_N	PF23240	36 - 181	1.1e-25	PRP39 N-terminal HAT repeat
Suf	PF05843	301 - 474	2e-52	Suppressor of forked protein (Suf)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002515)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17760
fragaria_vesca	FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_6g34990
malus_domestica	MD09G1000100.v1.1
prunus_persica	Prupe.1G353000_v2.0.a1
pyrus_communis	pycom08g21780
rosa_chinensis	RchiOBHm_Chr2g0146051 RchiOBHm_Chr7g0218051
rosa_laevigata	RLG00000002420 RLG00000020181
rosa_multiflora	Rmu_sc0000379.1_g000001 Rmu_sc0009440.1_g000001 Rmu_sc0009440.1_g000003 Rmu_sc0014682.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434850 Rroxscaffold_2G00100320 Rroxscaffold_3G00241460
rosa_rugosa	Rorug07G0173100
rosa_samantha	Rh2AG448900 Rh2BG461300 Rh2CG435900 Rh2DG470500 Rh7AG315500 Rh7BG305800 Rh7CG333000 Rh7DG313800 Rh7DG314300
rosa_wichuraiana	Rw2G036660 Rw7G026650 Rw7G026740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1750
Acc36I	ACCTGC	2 cut(s)	1750, 1900
AccB7I	CCANNNNNTGG	1 cut(s)	689
AccBSI	CCGCTC	2 cut(s)	20, 637
AccI	GTMKAC	1 cut(s)	1122
AciI	CCGC	5 cut(s)	20, 475, 565, 637, 2098
AclWI	GGATC	9 cut(s)	20, 784, 1055, 1068, 1401, 1425, 1589, 2059, 2125
AcoI	YGGCCR	1 cut(s)	1699
AcsI	RAATTY	6 cut(s)	544, 553, 605, 1250, 1621, 1765
AcuI	CTGAAG	1 cut(s)	972
AfaI	GTAC	4 cut(s)	407, 647, 977, 1890
AfeI	AGCGCT	1 cut(s)	93
AfiI	CCNNNNNNNGG	6 cut(s)	571, 630, 689, 1616, 1798, 1973
AjnI	CCWGG	4 cut(s)	28, 617, 1609, 1970
AluBI	AGCT	6 cut(s)	344, 374, 968, 1091, 1203, 1643
AluI	AGCT	6 cut(s)	344, 374, 968, 1091, 1203, 1643
Alw26I	GTCTC	3 cut(s)	326, 885, 1938
AlwI	GGATC	9 cut(s)	20, 784, 1055, 1068, 1401, 1425, 1589, 2059, 2125
AlwNI	CAGNNNCTG	5 cut(s)	139, 1550, 1643, 1865, 1892
Aor51HI	AGCGCT	1 cut(s)	93
AoxI	GGCC	9 cut(s)	389, 621, 1041, 1179, 1337, 1400, 1525, 1699, 1752
ApaI	GGGCCC	1 cut(s)	1183
ApeKI	GCWGC	6 cut(s)	94, 116, 158, 965, 1655, 1688
ApoI	RAATTY	6 cut(s)	544, 553, 605, 1250, 1621, 1765
AseI	ATTAAT	1 cut(s)	1461
AspLEI	GCGC	1 cut(s)	94
AspS9I	GGNCC	9 cut(s)	389, 621, 1179, 1180, 1337, 1401, 1423, 1496, 1784
AsuNHI	GCTAGC	3 cut(s)	1277, 2075, 2093
AvaII	GGWCC	3 cut(s)	1423, 1496, 1784
BaeGI	GKGCMC	1 cut(s)	1183
BalI	TGGCCA	1 cut(s)	1701
BamHI	GGATCC	1 cut(s)	1060
BanII	GRGCYC	1 cut(s)	1183
BauI	CACGAG	1 cut(s)	1112
BbsI	GAAGAC	1 cut(s)	245
BbvI	GCAGC	6 cut(s)	81, 128, 170, 977, 1642, 1700
BccI	CCATC	5 cut(s)	394, 576, 712, 1063, 1949
BceAI	ACGGC	3 cut(s)	608, 2064, 2075
BciT130I	CCWGG	4 cut(s)	30, 619, 1611, 1972
BciVI	GTATCC	1 cut(s)	2049
BcoDI	GTCTC	3 cut(s)	326, 885, 1938
BfaI	CTAG	6 cut(s)	336, 1278, 1662, 1947, 2076, 2094
BfmI	CTRYAG	3 cut(s)	156, 710, 2016
BfoI	RGCGCY	1 cut(s)	95
BfuAI	ACCTGC	2 cut(s)	1750, 1900
BfuI	GTATCC	1 cut(s)	2049
BglII	AGATCT	1 cut(s)	1270
BisI	GCNGC	8 cut(s)	95, 117, 159, 565, 966, 1656, 1689, 2098
BlsI	GCNGC	8 cut(s)	96, 118, 160, 566, 967, 1657, 1690, 2099
BmcAI	AGTACT	1 cut(s)	977
Bme1390I	CCNGG	4 cut(s)	30, 619, 1611, 1972
Bme18I	GGWCC	3 cut(s)	1423, 1496, 1784
BmgT120I	GGNCC	9 cut(s)	389, 621, 1179, 1180, 1337, 1401, 1423, 1496, 1784
BmiI	GGNNCC	3 cut(s)	1062, 1181, 1338
BmrFI	CCNGG	4 cut(s)	30, 619, 1611, 1972
BmsI	GCATC	5 cut(s)	202, 263, 520, 976, 2035
BmtI	GCTAGC	3 cut(s)	1281, 2079, 2097
BpiI	GAAGAC	1 cut(s)	245
BpmI	CTGGAG	2 cut(s)	1665, 2166
BsaBI	GATNNNNATC	1 cut(s)	1575
BsaJI	CCNNGG	5 cut(s)	42, 618, 1598, 1610, 1971
BsaXI	ACNNNNNCTCC	2 cut(s)	882, 912
Bsc4I	CCNNNNNNNGG	6 cut(s)	571, 630, 689, 1616, 1798, 1973
Bse118I	RCCGGY	2 cut(s)	234, 2165
Bse1I	ACTGG	2 cut(s)	694, 1528
Bse3DI	GCAATG	1 cut(s)	1041
Bse8I	GATNNNNATC	1 cut(s)	1575
BseBI	CCWGG	4 cut(s)	30, 619, 1611, 1972
BseDI	CCNNGG	5 cut(s)	42, 618, 1598, 1610, 1971
BseGI	GGATG	8 cut(s)	28, 405, 468, 723, 779, 1807, 1936, 1941
BseJI	GATNNNNATC	1 cut(s)	1575
BseLI	CCNNNNNNNGG	6 cut(s)	571, 630, 689, 1616, 1798, 1973
BseMI	GCAATG	1 cut(s)	1041
BseMII	CTCAG	1 cut(s)	373
BseNI	ACTGG	2 cut(s)	694, 1528
BseSI	GKGCMC	1 cut(s)	1183
BseXI	GCAGC	6 cut(s)	81, 128, 170, 977, 1642, 1700
BseYI	CCCAGC	2 cut(s)	736, 1091
BsgI	GTGCAG	1 cut(s)	991
BshFI	GGCC	9 cut(s)	391, 623, 1043, 1181, 1339, 1402, 1527, 1701, 1754
BsiSI	CCGG	2 cut(s)	235, 2166
BslFI	GGGAC	1 cut(s)	1876
BslI	CCNNNNNNNGG	6 cut(s)	571, 630, 689, 1616, 1798, 1973
BsmAI	GTCTC	3 cut(s)	326, 885, 1938
BsmBI	CGTCTC	1 cut(s)	885
BsmFI	GGGAC	1 cut(s)	1876
BsnI	GGCC	9 cut(s)	391, 623, 1043, 1181, 1339, 1402, 1527, 1701, 1754
Bsp120I	GGGCCC	1 cut(s)	1179
Bsp1286I	GDGCHC	1 cut(s)	1183
Bsp19I	CCATGG	1 cut(s)	42
BspACI	CCGC	5 cut(s)	20, 475, 565, 637, 2098
BspANI	GGCC	9 cut(s)	391, 623, 1043, 1181, 1339, 1402, 1527, 1701, 1754
BspCNI	CTCAG	1 cut(s)	372
BspLI	GGNNCC	3 cut(s)	1062, 1181, 1338
BspMAI	CTGCAG	2 cut(s)	160, 714
BspMI	ACCTGC	2 cut(s)	1750, 1900
BspOI	GCTAGC	3 cut(s)	1281, 2079, 2097
BspPI	GGATC	9 cut(s)	20, 784, 1055, 1068, 1401, 1425, 1589, 2059, 2125
BspQI	GCTCTTC	1 cut(s)	857
BsrBI	CCGCTC	2 cut(s)	20, 637
BsrDI	GCAATG	1 cut(s)	1041
BsrFI	RCCGGY	2 cut(s)	234, 2165
BsrI	ACTGG	2 cut(s)	694, 1528
BssAI	RCCGGY	2 cut(s)	234, 2165
BssECI	CCNNGG	5 cut(s)	42, 618, 1598, 1610, 1971
BssNAI	GTATAC	1 cut(s)	1123
BssSI	CACGAG	1 cut(s)	1112
BssT1I	CCWWGG	2 cut(s)	42, 1598
Bst1107I	GTATAC	1 cut(s)	1123
Bst2BI	CACGAG	1 cut(s)	1112
Bst2UI	CCWGG	4 cut(s)	30, 619, 1611, 1972
Bst4CI	ACNGT	8 cut(s)	145, 585, 614, 896, 927, 1104, 1639, 2020
Bst6I	CTCTTC	4 cut(s)	324, 444, 857, 1326
BstAPI	GCANNNNNTGC	1 cut(s)	194
BstC8I	GCNNGC	9 cut(s)	675, 970, 991, 1279, 1449, 1851, 2030, 2077, 2095
BstDEI	CTNAG	3 cut(s)	359, 1490, 1759
BstDSI	CCRYGG	1 cut(s)	42
BstF5I	GGATG	8 cut(s)	28, 405, 468, 723, 779, 1807, 1936, 1941
BstH2I	RGCGCY	1 cut(s)	95
BstHHI	GCGC	1 cut(s)	94
BstMAI	GTCTC	3 cut(s)	326, 885, 1938
BstNI	CCWGG	4 cut(s)	30, 619, 1611, 1972
BstNSI	RCATGY	1 cut(s)	1285
BstSCI	CCNGG	4 cut(s)	28, 617, 1609, 1970
BstSFI	CTRYAG	3 cut(s)	156, 710, 2016
BstSLI	GKGCMC	1 cut(s)	1183
BstV1I	GCAGC	6 cut(s)	81, 128, 170, 977, 1642, 1700
BstV2I	GAAGAC	1 cut(s)	245
BstX2I	RGATCY	5 cut(s)	1060, 1270, 1393, 1417, 2064
BstYI	RGATCY	5 cut(s)	1060, 1270, 1393, 1417, 2064
BstZ17I	GTATAC	1 cut(s)	1123
BsuI	GTATCC	1 cut(s)	2049
BsuRI	GGCC	9 cut(s)	391, 623, 1043, 1181, 1339, 1402, 1527, 1701, 1754
BtgI	CCRYGG	1 cut(s)	42
BtgZI	GCGATG	2 cut(s)	286, 394
BtsCI	GGATG	8 cut(s)	28, 405, 468, 723, 779, 1807, 1936, 1941
BtsI	GCAGTG	4 cut(s)	153, 719, 818, 2100
BtsIMutI	CAGTG	7 cut(s)	69, 153, 619, 719, 818, 1551, 2100
BveI	ACCTGC	2 cut(s)	1750, 1900
Cac8I	GCNNGC	9 cut(s)	675, 970, 991, 1279, 1449, 1851, 2030, 2077, 2095
CaiI	CAGNNNCTG	5 cut(s)	139, 1550, 1643, 1865, 1892
CfoI	GCGC	1 cut(s)	94
Cfr10I	RCCGGY	2 cut(s)	234, 2165
Cfr13I	GGNCC	9 cut(s)	389, 621, 1179, 1180, 1337, 1401, 1423, 1496, 1784
CseI	GACGC	1 cut(s)	372
Csp6I	GTAC	4 cut(s)	406, 646, 976, 1889
CspCI	CAANNNNNGTGG	2 cut(s)	1728, 1763
CviAII	CATG	4 cut(s)	43, 1016, 1282, 1390
CviQI	GTAC	4 cut(s)	406, 646, 976, 1889
DdeI	CTNAG	3 cut(s)	359, 1490, 1759
DraI	TTTAAA	1 cut(s)	420
EaeI	YGGCCR	1 cut(s)	1699
Eam1104I	CTCTTC	4 cut(s)	324, 444, 857, 1326
EarI	CTCTTC	4 cut(s)	324, 444, 857, 1326
Eco130I	CCWWGG	2 cut(s)	42, 1598
Eco24I	GRGCYC	1 cut(s)	1183
Eco47I	GGWCC	3 cut(s)	1423, 1496, 1784
Eco47III	AGCGCT	1 cut(s)	93
Eco57I	CTGAAG	1 cut(s)	972
EcoO109I	RGGNCCY	2 cut(s)	1180, 1337
EcoRII	CCWGG	4 cut(s)	28, 617, 1609, 1970
EcoT14I	CCWWGG	2 cut(s)	42, 1598
EcoT38I	GRGCYC	1 cut(s)	1183
ErhI	CCWWGG	2 cut(s)	42, 1598
Esp3I	CGTCTC	1 cut(s)	885
FaeI	CATG	4 cut(s)	46, 1019, 1285, 1393
FalI	AAGNNNNNCTT	4 cut(s)	1299, 1331, 1431, 1463
FaqI	GGGAC	1 cut(s)	1876
FatI	CATG	4 cut(s)	42, 1015, 1281, 1389
FauNDI	CATATG	1 cut(s)	805
FblI	GTMKAC	1 cut(s)	1122
Fnu4HI	GCNGC	8 cut(s)	95, 117, 159, 565, 966, 1656, 1689, 2098
FokI	GGATG	8 cut(s)	35, 412, 475, 730, 766, 1814, 1923, 1928
FriOI	GRGCYC	1 cut(s)	1183
Fsp4HI	GCNGC	8 cut(s)	95, 117, 159, 565, 966, 1656, 1689, 2098
FspBI	CTAG	6 cut(s)	336, 1278, 1662, 1947, 2076, 2094
GlaI	GCGC	1 cut(s)	93
GluI	GCNGC	8 cut(s)	95, 117, 159, 565, 966, 1656, 1689, 2098
GsaI	CCCAGC	2 cut(s)	740, 1095
GsuI	CTGGAG	2 cut(s)	1665, 2166
HaeII	RGCGCY	1 cut(s)	95
HaeIII	GGCC	9 cut(s)	391, 623, 1043, 1181, 1339, 1402, 1527, 1701, 1754
HapII	CCGG	2 cut(s)	235, 2166
HgaI	GACGC	1 cut(s)	372
HhaI	GCGC	1 cut(s)	94
Hin1II	CATG	4 cut(s)	46, 1019, 1285, 1393
Hin6I	GCGC	1 cut(s)	92
HinP1I	GCGC	1 cut(s)	92
HincII	GTYRAC	3 cut(s)	652, 901, 1482
HindII	GTYRAC	3 cut(s)	652, 901, 1482
HindIII	AAGCTT	1 cut(s)	342
HinfI	GANTC	3 cut(s)	136, 452, 754
HpaI	GTTAAC	1 cut(s)	901
HpaII	CCGG	2 cut(s)	235, 2166
Hpy166II	GTNNAC	5 cut(s)	652, 901, 1123, 1482, 1496
Hpy188I	TCNGA	4 cut(s)	141, 293, 592, 1629
Hpy8I	GTNNAC	5 cut(s)	652, 901, 1123, 1482, 1496
HpyCH4III	ACNGT	8 cut(s)	145, 585, 614, 896, 927, 1104, 1639, 2020
HpyCH4IV	ACGT	1 cut(s)	648
HpyF3I	CTNAG	3 cut(s)	359, 1490, 1759
HpySE526I	ACGT	1 cut(s)	648
Hsp92II	CATG	4 cut(s)	46, 1019, 1285, 1393
HspAI	GCGC	1 cut(s)	92
KspAI	GTTAAC	1 cut(s)	901
LguI	GCTCTTC	1 cut(s)	857
LmnI	GCTCC	3 cut(s)	371, 634, 1900
Lsp1109I	GCAGC	6 cut(s)	81, 128, 170, 977, 1642, 1700
LweI	GCATC	5 cut(s)	202, 263, 520, 976, 2035
MaeI	CTAG	6 cut(s)	336, 1278, 1662, 1947, 2076, 2094
MaeII	ACGT	1 cut(s)	648
MaeIII	GTNAC	4 cut(s)	426, 499, 1732, 1910
MbiI	CCGCTC	2 cut(s)	20, 637
MboII	GAAGA	8 cut(s)	245, 341, 461, 652, 716, 844, 1343, 1893
MflI	RGATCY	5 cut(s)	1060, 1270, 1393, 1417, 2064
MhlI	GDGCHC	1 cut(s)	1183
MlsI	TGGCCA	1 cut(s)	1701
MluNI	TGGCCA	1 cut(s)	1701
MlyI	GAGTC	1 cut(s)	461
MmeI	TCCRAC	4 cut(s)	349, 807, 1597, 1811
MnlI	CCTC	7 cut(s)	40, 106, 178, 313, 1222, 1327, 1360
Mox20I	TGGCCA	1 cut(s)	1701
MscI	TGGCCA	1 cut(s)	1701
MseI	TTAA	8 cut(s)	419, 609, 900, 941, 1148, 1199, 1461, 1727
MslI	CAYNNNNRTG	1 cut(s)	1020
Msp20I	TGGCCA	1 cut(s)	1701
MspI	CCGG	2 cut(s)	235, 2166
MspR9I	CCNGG	4 cut(s)	30, 619, 1611, 1972
MvaI	CCWGG	4 cut(s)	30, 619, 1611, 1972
NcoI	CCATGG	1 cut(s)	42
NdeI	CATATG	1 cut(s)	805
NheI	GCTAGC	3 cut(s)	1277, 2075, 2093
NlaIII	CATG	4 cut(s)	46, 1019, 1285, 1393
NlaIV	GGNNCC	3 cut(s)	1062, 1181, 1338
NmuCI	GTSAC	1 cut(s)	1910
NspI	RCATGY	1 cut(s)	1285
PaqCI	CACCTGC	1 cut(s)	1750
PciSI	GCTCTTC	1 cut(s)	857
PfeI	GAWTC	2 cut(s)	136, 754
PflMI	CCANNNNNTGG	1 cut(s)	689
PkrI	GCNGC	8 cut(s)	96, 118, 160, 566, 967, 1657, 1690, 2099
PleI	GAGTC	1 cut(s)	460
PpsI	GAGTC	1 cut(s)	460
PshBI	ATTAAT	1 cut(s)	1461
Psp6I	CCWGG	4 cut(s)	28, 617, 1609, 1970
PspFI	CCCAGC	2 cut(s)	736, 1091
PspGI	CCWGG	4 cut(s)	28, 617, 1609, 1970
PspN4I	GGNNCC	3 cut(s)	1062, 1181, 1338
PspOMI	GGGCCC	1 cut(s)	1179
PspPI	GGNCC	9 cut(s)	389, 621, 1179, 1180, 1337, 1401, 1423, 1496, 1784
PsrI	GAACNNNNNNTAC	2 cut(s)	1632, 1664
PstI	CTGCAG	2 cut(s)	160, 714
PstNI	CAGNNNCTG	5 cut(s)	139, 1550, 1643, 1865, 1892
PsuI	RGATCY	5 cut(s)	1060, 1270, 1393, 1417, 2064
RsaI	GTAC	4 cut(s)	407, 647, 977, 1890
RsaNI	GTAC	4 cut(s)	406, 646, 976, 1889
RseI	CAYNNNNRTG	1 cut(s)	1020
SapI	GCTCTTC	1 cut(s)	857
SaqAI	TTAA	8 cut(s)	419, 609, 900, 941, 1148, 1199, 1461, 1727
SatI	GCNGC	8 cut(s)	95, 117, 159, 565, 966, 1656, 1689, 2098
Sau96I	GGNCC	9 cut(s)	389, 621, 1179, 1180, 1337, 1401, 1423, 1496, 1784
ScaI	AGTACT	1 cut(s)	977
SchI	GAGTC	1 cut(s)	461
ScrFI	CCNGG	4 cut(s)	30, 619, 1611, 1972
SduI	GDGCHC	1 cut(s)	1183
SfaNI	GCATC	5 cut(s)	202, 263, 520, 976, 2035
SfcI	CTRYAG	3 cut(s)	156, 710, 2016
SinI	GGWCC	3 cut(s)	1423, 1496, 1784
SmiMI	CAYNNNNRTG	1 cut(s)	1020
SsiI	CCGC	5 cut(s)	20, 475, 565, 637, 2098
SspI	AATATT	4 cut(s)	167, 1174, 1459, 1725
SspMI	CTAG	6 cut(s)	336, 1278, 1662, 1947, 2076, 2094
StyD4I	CCNGG	4 cut(s)	28, 617, 1609, 1970
StyI	CCWWGG	2 cut(s)	42, 1598
TaaI	ACNGT	8 cut(s)	145, 585, 614, 896, 927, 1104, 1639, 2020
TaiI	ACGT	1 cut(s)	651
TaqI	TCGA	2 cut(s)	9, 1378
TatI	WGTACW	2 cut(s)	405, 975
TauI	GCSGC	2 cut(s)	567, 2100
TfiI	GAWTC	2 cut(s)	136, 754
Tru1I	TTAA	8 cut(s)	419, 609, 900, 941, 1148, 1199, 1461, 1727
Tru9I	TTAA	8 cut(s)	419, 609, 900, 941, 1148, 1199, 1461, 1727
TscAI	CASTG	7 cut(s)	76, 160, 619, 719, 818, 1551, 2107
TseFI	GTSAC	1 cut(s)	1910
TseI	GCWGC	6 cut(s)	94, 116, 158, 965, 1655, 1688
Tsp45I	GTSAC	1 cut(s)	1910
TspDTI	ATGAA	8 cut(s)	277, 555, 1332, 1344, 1378, 1530, 1734, 2025
TspGWI	ACGGA	2 cut(s)	475, 1872
TspRI	CASTG	7 cut(s)	76, 160, 619, 719, 818, 1551, 2107
Van91I	CCANNNNNTGG	1 cut(s)	689
VpaK11BI	GGWCC	3 cut(s)	1423, 1496, 1784
VspI	ATTAAT	1 cut(s)	1461
XapI	RAATTY	6 cut(s)	544, 553, 605, 1250, 1621, 1765
XceI	RCATGY	1 cut(s)	1285
XmiI	GTMKAC	1 cut(s)	1122
XspI	CTAG	6 cut(s)	336, 1278, 1662, 1947, 2076, 2094
ZrmI	AGTACT	1 cut(s)	977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.