Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0004820

Physical Location & Seq

Genomic Coordinates Forward (+)

19128128 .. 19149507

Gene Structure 21380 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g27890.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3171 bp

ATGGCCGATCCTCTGGAGAGACTGGGATCGGAGGAGGAGGAGGACGCCGGCGGATCATCGAGGCTGAAGGAGGACGAGCTCTGCATGGAGATCGACCCGCCCTTCAGAGAAAGCACCGCCACCACGGAGGACTGGAGGAAGGCTCTCGCCAAGGTCGTCCCTGCCGTCGTCGTTTTGAGGACTACGGCGTGTCGTGCCTTCGATACTGAGGCCGCCGGTGCTAGCTATGCCACCGGCTTTGTCATCGATAAGCGCCGCGGGATCATCCTCACCAATCGCCATGTTGTCAAGCCTGGACCTGTAGTTGCGGAAGCTATGTTTGTGAATCGTGAAGAAGTTCCAGTATATCCTATATACAGGGATCCGGTCCATGATTTTGGCTTCTTTTGTTACGATCCTGATGCAATACAGTTTCTGAAGTATGAAGAGATTCCGCTTGCCCCTGAGGCTGCTTCAGTTGGATTAGAAATCAGGGTTGTTGGTAATGACAGCGGTGAGAAGGTCTCCATTTTGGCTGGTACTCTTGCTCGTTTGGATAGAGACGCTCCTCATTACAAAAAGGATGGCTATAATGACTTTAATACATTCTACATGCAAGCTGCATCTGGTACTAAAGGTGGGTCCAGTGGGTCTCCTGTGATTGATTGGCTAGGTAGGGCGGTGGCTTTGAATGCTGGTAGCAAGTCATCAAGTGCATCAGCATTTTTTTTACCACTGGAACGAGTTGTGAGGGCATTGAAGTTTCTCCAAAACGGCAGAGATTCTTTTGTCAAAAAATGGGAGGCAGTTTCTATACTGCGTGGTACACTTCAGGTAACTTTTGTCCACAAAGGATTTGATGAGACACGGCGACTTGGTCTTCAAACTGAGACGGAGCAGAGAGTTCGACATGCATCTCCGCAGGGTGAAACTGGAATGCTTGTTGTTGAATCTGTGGTGCCAGGCGGTCCAGCTCACAAGTGTTTGGAGCCAGGTGATGTTCTTGTTTGCATCAATGGGGAAGTAATTACTCAATTCCTAAAAATGGAGTCGTTACTTGATGATAGTGTAAATCAGAAAATTGAGATACAGATCGAAAGGAGTGGCACGCCATTAACTGTAAACTTGCTGGTGCAGGATTTACACTTGATAACCCCAAATTACTTCTTAGAAGTAAGTGGTGCAGTTATACACCCTCTCTCGTATCAACAGGCCAGAAATTTTCGCTTCCAATGTGGCCTCGTGTATGTGGCGGAGCCAGGATATATGCTCTTTAGAGCTGGAGTTCCACGCCATGCTATCATTAAGAAGTTTGCTGGTCAGGAAGTATCACGACTTGATGATCTAATTTCAGTTCTATGCAAGCTATCTCGTGGTGCTCGAGTACCGTTGGAGTATGTAAGCTATGCAGATCGTCATCGGAGGAAGTCAGTCCTGGTCACCGTGGATCGCCATGAATGCCATGTAGAATTCAATGAAGGGGTCACCAGTATGGAGACCAGTTATGAACATTCTGAAGGAGGAGTTCCTCGGGATGAATCTGATGTTGAAACAAAGAAACGCCGAGTAAAGGAGGATTTTTCTTCTGATGCCAATGTCTTAGCCGATGGTTCCTTTCTTGAAAGAAATGAAGGTGATGTGGAGGATGCAGATATTGTGGAGAATTCTGTGATGAGAGATTTTCAAGGTGAAAATCTAGCAGCAGCTAATTCTTCACTAGCTGAACGTATTATCGAGCCGACTCTCGTTATGCTTGAGGTTCATGTACCACCATCATGTATGCTCGACGGTGTACATTCACAACATTTTTTCGGGACTGGTGTCATTATATACCATTCACAAGACATGGGATTGATTGCTGTTGACAAAAATACTGTTGTGATATCTACATCTGATGTGATGCTCTCATTCGCTGCATTTCCAATAGAAATTCCAGGGGAGGTTGTTTTTCTCCATCCTGTGCACAATTATGCTCTCATTTCATATGATCCATTGGCCCTGGGCGCTGTTGGATTCTCGCTTGTTCGAGCTGCTGAACTACTTCCTGAGCCTGCAATACGTCGTGGGGATTCTGTGCATCTTGTTGGGCTAAGTAGAAGCCTACAAGCAACGTCTAGAAAGTCTATAGTGACCAACCCATGTGCTGCTGTAAATATTAGCTCTGCTGATTGTCCACGTTACAGAGCAACCAATATGGAAGTGATTGAGCTTGATACTGATTTTGGCAGTACATTCTCTGGAGTGCTAACTGATGAGCACGGAAGGGTCCGAGCTATTTGGGGTAGCTTTTCAACTCAGCTGAAATTTGGTTGCAGTAGCTCTGAGGATCATCAATTTGTAAGAGGTATCCCAATATATACAATCAGTGACGTCCTTGAACAAATCATATCTGGTGCTCAAGGCCCTCCTCTTCTCATCAATAGTGTCAAAAGGCCGATGCCTCTAGTTAGAATTTTGGAAGTTGAACTGTATCCTACACTGCTTTCAAAAGCCCGCAGTTTCGGATTGAGTGATGATTGGGTCCAAGAACTTGTCAAGAAAGATCCAATTAGGCGACAGGTTTTACGTGTGAAAGGATGTTTAGCTGGATCCAAGGCCGAAAATCTGTTAGAACAAGGGGACATGGTCTTGGCAATCAATAAGGAGCCAGTGACATGCTTCCGTGATGTAGAAAATGTCTGCCAAGCATTGGGAAGAAATGAAAACAAAGATGGAAAGCTTAGCATGACCATCTTCCGTCAGGGGCGTGAAATTGATGTTCTTGTCGAAACAGATATTAGGGATGGGAGTGGCACTACACGTGTGATAAATTGGTGTGGATGTATCGTTCAGGATCCCCATCCCGCAGTGCGTGCTCTTGGATTTCTTCCAGAAGAAGGTCATGGTGTTTATGTGGCAAGGTGGTGTCATGGTAGCCCAGCACATAGATATGGCCTCTATGCTCTCCAGTGGATTGTTGAAGTTAATGGCAAAAAGACTCCTGATTTAGATGCTTTCTTGAATGTCACAAAGGAAATAGAACATGGAGAGTTTGTTCGTCTACGGACCATCCACCTAAATGGAAAACCAAAAGTTCTGACGTTGAAGCAGGACTTGCACTACTGGCCCACATGGGAGGTCAGATTTGATCCTGACTCCGCTATGTGGCGTCGACACACAATCAAGGCACTTGACTATAGTTCTTGTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009642 GO:0009644 GO:0009892 GO:0010109 GO:0010205 GO:0016787 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0042548 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0071704 GO:0140096 GO:1901564 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_1 PDZ_2 Trypsin_2

Protein Analysis

1057

Amino Acids

117.13

Weight (kDa)

5.64

Isoelectric Point (pI)

42.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin_2	PF13365	77 - 223	1e-20	Trypsin-like peptidase domain
PDZ_2	PF13180	286 - 370	2.6e-06	PDZ domain
PDZ_6	PF17820	308 - 360	2.2e-09	PDZ domain
PDZ_1	PF12812	377 - 449	2.4e-15	PDZ-like domain
PDZ_1	PF12812	998 - 1073	2.1e-08	PDZ-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03380 AT3G03380
fragaria_vesca	FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890
malus_domestica	MD17G1256700.v1.1
prunus_persica	Prupe.3G159400_v2.0.a1 Prupe.3G159400_v2.0.a1 Prupe.3G159400_v2.0.a1 Prupe.3G159400_v2.0.a1
pyrus_communis	pycom17g25890
rosa_chinensis	RchiOBHm_Chr7g0220101
rosa_laevigata	RLG00000002258
rosa_multiflora	Rmu_sc0007553.1_g000006 Rmu_sc0018981.1_g000001
rosa_roxburghii	Rroxscaffold_3G00239790
rosa_rugosa	Rorug07G0188800 Rorug07G0188900 Rorug07G0188900 Rorug07G0189000
rosa_samantha	Rh7AG332500 Rh7BG322400 Rh7CG350000 Rh7DG328200
rosa_wichuraiana	Rw7G028000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2352
AccB1I	GGYRCC	1 cut(s)	937
AccB7I	CCANNNNNTGG	1 cut(s)	2668
AccI	GTMKAC	2 cut(s)	3019, 3130
AccII	CGCG	1 cut(s)	258
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	6 cut(s)	1198, 1448, 1642, 1908, 2282, 2430
AcuI	CTGAAG	6 cut(s)	86, 88, 437, 438, 794, 1515
AcvI	CACGTG	1 cut(s)	2780
AcyI	GRCGYC	3 cut(s)	45, 2349, 3127
AfaI	GTAC	7 cut(s)	520, 610, 805, 1365, 1746, 1773, 2209
AfiI	CCNNNNNNNGG	5 cut(s)	1024, 1549, 2668, 2855, 3123
AflIII	ACRYGT	3 cut(s)	2545, 2777, 2779
AjnI	CCWGG	7 cut(s)	292, 940, 970, 1237, 1413, 1912, 1977
AloI	GAACNNNNNNTCC	4 cut(s)	2790, 2822, 2997, 3029
Alw21I	GWGCWC	6 cut(s)	81, 1360, 1944, 2238, 2377, 2836
Alw26I	GTCTC	7 cut(s)	13, 508, 534, 636, 836, 863, 1469
Alw44I	GTGCAC	1 cut(s)	1940
AlwNI	CAGNNNCTG	1 cut(s)	415
Ama87I	CYCGRG	2 cut(s)	1359, 1509
ApaLI	GTGCAC	1 cut(s)	1940
ApeKI	GCWGC	7 cut(s)	449, 599, 1679, 1682, 1892, 2009, 2123
ApoI	RAATTY	6 cut(s)	1198, 1448, 1642, 1908, 2282, 2430
Asp700I	GAANNNNTTC	3 cut(s)	336, 429, 2019
AspLEI	GCGC	2 cut(s)	255, 1985
AsuHPI	GGTGA	8 cut(s)	262, 506, 917, 986, 1411, 1456, 1625, 1679
AsuNHI	GCTAGC	1 cut(s)	221
AvaI	CYCGRG	2 cut(s)	1359, 1509
AvaII	GGWCC	7 cut(s)	296, 367, 621, 947, 2245, 2500, 3024
AxyI	CCTNAGG	1 cut(s)	444
BaeGI	GKGCMC	1 cut(s)	1944
BamHI	GGATCC	3 cut(s)	361, 2567, 2812
BanI	GGYRCC	1 cut(s)	937
BanII	GRGCYC	1 cut(s)	81
BauI	CACGAG	2 cut(s)	1220, 1350
BbrPI	CACGTG	1 cut(s)	2780
BbsI	GAAGAC	1 cut(s)	851
Bbv12I	GWGCWC	6 cut(s)	81, 1360, 1944, 2238, 2377, 2836
BbvI	GCAGC	7 cut(s)	436, 586, 1691, 1694, 1879, 1996, 2110
BccI	CCATC	9 cut(s)	557, 1580, 1759, 1941, 2684, 2717, 2756, 2826, 3035
BceAI	ACGGC	4 cut(s)	149, 201, 769, 863
BcgI	CGANNNNNNTGC	6 cut(s)	73, 107, 383, 417, 866, 900
BciT130I	CCWGG	7 cut(s)	294, 942, 972, 1239, 1415, 1914, 1979
BciVI	GTATCC	2 cut(s)	2336, 2460
BcoDI	GTCTC	7 cut(s)	13, 508, 534, 636, 836, 863, 1469
BfaI	CTAG	6 cut(s)	222, 650, 1676, 1697, 2094, 2423
BfmI	CTRYAG	3 cut(s)	300, 2103, 3154
BfoI	RGCGCY	2 cut(s)	256, 1986
BfuI	GTATCC	2 cut(s)	2336, 2460
BglI	GCCNNNNNGGC	1 cut(s)	446
BisI	GCNGC	9 cut(s)	213, 256, 450, 600, 1680, 1683, 1893, 2010, 2124
BlpI	GCTNAGC	1 cut(s)	2699
BlsI	GCNGC	9 cut(s)	214, 257, 451, 601, 1681, 1684, 1894, 2011, 2125
Bme1390I	CCNGG	7 cut(s)	294, 942, 972, 1239, 1415, 1914, 1979
Bme18I	GGWCC	7 cut(s)	296, 367, 621, 947, 2245, 2500, 3024
BmeT110I	CYCGRG	2 cut(s)	1359, 1509
BmrFI	CCNGG	7 cut(s)	294, 942, 972, 1239, 1415, 1914, 1979
BmrI	ACTGGG	1 cut(s)	32
BmtI	GCTAGC	1 cut(s)	225
BmuI	ACTGGG	1 cut(s)	32
BoxI	GACNNNNGTC	1 cut(s)	1799
BpiI	GAAGAC	1 cut(s)	851
BplI	GAGNNNNNCTC	4 cut(s)	127, 159, 488, 520
BpmI	CTGGAG	5 cut(s)	35, 154, 1281, 2238, 2909
Bpu10I	CCTNAGC	1 cut(s)	2025
Bpu1102I	GCTNAGC	1 cut(s)	2699
BpuEI	CTTGAG	2 cut(s)	1754, 2361
Bsa29I	ATCGAT	1 cut(s)	246
BsaAI	YACGTR	2 cut(s)	2546, 2780
BsaBI	GATNNNNATC	3 cut(s)	1070, 1395, 2817
BsaHI	GRCGYC	3 cut(s)	45, 2349, 3127
BsaI	GGTCTC	3 cut(s)	508, 636, 1469
BsaJI	CCNNGG	9 cut(s)	123, 150, 256, 1422, 1508, 1913, 1977, 1978, 2571
BsaWI	WCCGGW	1 cut(s)	364
BsaXI	ACNNNNNCTCC	2 cut(s)	2997, 3027
Bsc4I	CCNNNNNNNGG	5 cut(s)	1024, 1549, 2668, 2855, 3123
Bse118I	RCCGGY	3 cut(s)	47, 215, 233
Bse21I	CCTNAGG	1 cut(s)	444
Bse8I	GATNNNNATC	3 cut(s)	1070, 1395, 2817
BseBI	CCWGG	7 cut(s)	294, 942, 972, 1239, 1415, 1914, 1979
BseCI	ATCGAT	1 cut(s)	246
BseDI	CCNNGG	9 cut(s)	123, 150, 256, 1422, 1508, 1913, 1977, 1978, 2571
BseJI	GATNNNNATC	3 cut(s)	1070, 1395, 2817
BseLI	CCNNNNNNNGG	5 cut(s)	1024, 1549, 2668, 2855, 3123
BseMII	CTCAG	6 cut(s)	198, 435, 858, 2016, 2288, 2292
BseRI	GAGGAG	6 cut(s)	47, 50, 53, 537, 1515, 2376
BseSI	GKGCMC	1 cut(s)	1944
BseXI	GCAGC	7 cut(s)	436, 586, 1691, 1694, 1879, 1996, 2110
BseYI	CCCAGC	1 cut(s)	2896
BsgI	GTGCAG	2 cut(s)	1133, 1182
Bsh1236I	CGCG	1 cut(s)	258
BshNI	GGYRCC	1 cut(s)	937
BshVI	ATCGAT	1 cut(s)	246
BsiHKAI	GWGCWC	6 cut(s)	81, 1360, 1944, 2238, 2377, 2836
BsiHKCI	CYCGRG	2 cut(s)	1359, 1509
BsiSI	CCGG	4 cut(s)	48, 216, 234, 365
BslFI	GGGAC	3 cut(s)	143, 1807, 2612
BslI	CCNNNNNNNGG	5 cut(s)	1024, 1549, 2668, 2855, 3123
BsmAI	GTCTC	7 cut(s)	13, 508, 534, 636, 836, 863, 1469
BsmBI	CGTCTC	2 cut(s)	534, 863
BsmFI	GGGAC	3 cut(s)	143, 1807, 2612
BsmI	GAATGC	3 cut(s)	676, 921, 1442
Bso31I	GGTCTC	3 cut(s)	508, 636, 1469
BsoBI	CYCGRG	2 cut(s)	1359, 1509
Bsp1286I	GDGCHC	6 cut(s)	81, 1360, 1944, 2238, 2377, 2836
Bsp1407I	TGTACA	1 cut(s)	1771
Bsp1720I	GCTNAGC	1 cut(s)	2699
BspCNI	CTCAG	6 cut(s)	199, 436, 859, 2017, 2287, 2293
BspDI	ATCGAT	1 cut(s)	246
BspFNI	CGCG	1 cut(s)	258
BspOI	GCTAGC	1 cut(s)	225
BspT107I	GGYRCC	1 cut(s)	937
BspTNI	GGTCTC	3 cut(s)	508, 636, 1469
BsrFI	RCCGGY	3 cut(s)	47, 215, 233
BsrGI	TGTACA	1 cut(s)	1771
BssAI	RCCGGY	3 cut(s)	47, 215, 233
BssECI	CCNNGG	9 cut(s)	123, 150, 256, 1422, 1508, 1913, 1977, 1978, 2571
BssNI	GRCGYC	3 cut(s)	45, 2349, 3127
BssSI	CACGAG	2 cut(s)	1220, 1350
BssT1I	CCWWGG	2 cut(s)	150, 2571
Bst2BI	CACGAG	2 cut(s)	1220, 1350
Bst2UI	CCWGG	7 cut(s)	294, 942, 972, 1239, 1415, 1914, 1979
Bst4CI	ACNGT	7 cut(s)	411, 1099, 1368, 1423, 1769, 1855, 2448
Bst6I	CTCTTC	2 cut(s)	420, 2394
BstACI	GRCGYC	3 cut(s)	45, 2349, 3127
BstAPI	GCANNNNNTGC	2 cut(s)	2831, 3073
BstAUI	TGTACA	1 cut(s)	1771
BstBAI	YACGTR	2 cut(s)	2546, 2780
BstC8I	GCNNGC	9 cut(s)	49, 223, 438, 597, 1088, 1343, 2031, 2473, 2832
BstDSI	CCRYGG	3 cut(s)	123, 256, 1422
BstEII	GGTNACC	2 cut(s)	1417, 1462
BstFNI	CGCG	1 cut(s)	258
BstH2I	RGCGCY	2 cut(s)	256, 1986
BstHHI	GCGC	2 cut(s)	255, 1985
BstMAI	GTCTC	7 cut(s)	13, 508, 534, 636, 836, 863, 1469
BstNI	CCWGG	7 cut(s)	294, 942, 972, 1239, 1415, 1914, 1979
BstNSI	RCATGY	3 cut(s)	595, 893, 2637
BstPAI	GACNNNNGTC	1 cut(s)	1799
BstPI	GGTNACC	2 cut(s)	1417, 1462
BstSCI	CCNGG	7 cut(s)	292, 940, 970, 1237, 1413, 1912, 1977
BstSFI	CTRYAG	3 cut(s)	300, 2103, 3154
BstSLI	GKGCMC	1 cut(s)	1944
BstUI	CGCG	1 cut(s)	258
BstV1I	GCAGC	7 cut(s)	436, 586, 1691, 1694, 1879, 1996, 2110
BstV2I	GAAGAC	1 cut(s)	851
BstX2I	RGATCY	4 cut(s)	361, 2521, 2567, 2812
BstXI	CCANNNNNNTGG	2 cut(s)	377, 3038
BstYI	RGATCY	4 cut(s)	361, 2521, 2567, 2812
Bsu15I	ATCGAT	1 cut(s)	246
Bsu36I	CCTNAGG	1 cut(s)	444
BsuI	GTATCC	2 cut(s)	2336, 2460
BsuTUI	ATCGAT	1 cut(s)	246
BtgI	CCRYGG	3 cut(s)	123, 256, 1422
BtsI	GCAGTG	2 cut(s)	2456, 2832
BtsIMutI	CAGTG	7 cut(s)	631, 713, 2350, 2456, 2634, 2832, 2933
Cac8I	GCNNGC	9 cut(s)	49, 223, 438, 597, 1088, 1343, 2031, 2473, 2832
CaiI	CAGNNNCTG	1 cut(s)	415
CfoI	GCGC	2 cut(s)	255, 1985
Cfr10I	RCCGGY	3 cut(s)	47, 215, 233
Cfr42I	CCGCGG	1 cut(s)	259
ClaI	ATCGAT	1 cut(s)	246
CseI	GACGC	3 cut(s)	53, 551, 3116
Csp6I	GTAC	7 cut(s)	519, 609, 804, 1364, 1745, 1772, 2208
CspCI	CAANNNNNGTGG	2 cut(s)	220, 255
CviQI	GTAC	7 cut(s)	519, 609, 804, 1364, 1745, 1772, 2208
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	420, 2394
EarI	CTCTTC	2 cut(s)	420, 2394
EciI	GGCGGA	2 cut(s)	66, 1247
Ecl136II	GAGCTC	1 cut(s)	79
Eco130I	CCWWGG	2 cut(s)	150, 2571
Eco24I	GRGCYC	1 cut(s)	81
Eco31I	GGTCTC	3 cut(s)	508, 636, 1469
Eco32I	GATATC	1 cut(s)	1863
Eco47I	GGWCC	7 cut(s)	296, 367, 621, 947, 2245, 2500, 3024
Eco53kI	GAGCTC	1 cut(s)	79
Eco57I	CTGAAG	6 cut(s)	86, 88, 437, 438, 794, 1515
Eco72I	CACGTG	1 cut(s)	2780
Eco81I	CCTNAGG	1 cut(s)	444
Eco88I	CYCGRG	2 cut(s)	1359, 1509
Eco91I	GGTNACC	2 cut(s)	1417, 1462
EcoICRI	GAGCTC	1 cut(s)	79
EcoO109I	RGGNCCY	1 cut(s)	2381
EcoO65I	GGTNACC	2 cut(s)	1417, 1462
EcoRI	GAATTC	2 cut(s)	1448, 1642
EcoRII	CCWGG	7 cut(s)	292, 940, 970, 1237, 1413, 1912, 1977
EcoRV	GATATC	1 cut(s)	1863
EcoT14I	CCWWGG	2 cut(s)	150, 2571
EcoT22I	ATGCAT	1 cut(s)	895
EcoT38I	GRGCYC	1 cut(s)	81
ErhI	CCWWGG	2 cut(s)	150, 2571
Esp3I	CGTCTC	2 cut(s)	534, 863
FalI	AAGNNNNNCTT	2 cut(s)	3056, 3088
FaqI	GGGAC	3 cut(s)	143, 1807, 2612
FauI	CCCGC	4 cut(s)	105, 251, 2480, 2830
FauNDI	CATATG	1 cut(s)	1963
FblI	GTMKAC	2 cut(s)	3019, 3130
Fnu4HI	GCNGC	9 cut(s)	213, 256, 450, 600, 1680, 1683, 1893, 2010, 2124
FriOI	GRGCYC	1 cut(s)	81
Fsp4HI	GCNGC	9 cut(s)	213, 256, 450, 600, 1680, 1683, 1893, 2010, 2124
FspBI	CTAG	6 cut(s)	222, 650, 1676, 1697, 2094, 2423
GlaI	GCGC	2 cut(s)	254, 1984
GluI	GCNGC	9 cut(s)	213, 256, 450, 600, 1680, 1683, 1893, 2010, 2124
GsaI	CCCAGC	1 cut(s)	2900
GsuI	CTGGAG	5 cut(s)	35, 154, 1281, 2238, 2909
HaeII	RGCGCY	2 cut(s)	256, 1986
HapII	CCGG	4 cut(s)	48, 216, 234, 365
HgaI	GACGC	3 cut(s)	53, 551, 3116
HhaI	GCGC	2 cut(s)	255, 1985
Hin1I	GRCGYC	3 cut(s)	45, 2349, 3127
Hin6I	GCGC	2 cut(s)	253, 1983
HinP1I	GCGC	2 cut(s)	253, 1983
HincII	GTYRAC	2 cut(s)	1843, 3131
HindII	GTYRAC	2 cut(s)	1843, 3131
HindIII	AAGCTT	1 cut(s)	2696
HpaII	CCGG	4 cut(s)	48, 216, 234, 365
HphI	GGTGA	8 cut(s)	262, 506, 917, 986, 1411, 1456, 1625, 1679
Hpy166II	GTNNAC	9 cut(s)	806, 826, 1102, 1772, 1843, 1942, 2153, 3020, 3131
Hpy8I	GTNNAC	9 cut(s)	806, 826, 1102, 1772, 1843, 1942, 2153, 3020, 3131
Hpy99I	CGWCG	5 cut(s)	170, 173, 1769, 2043, 3132
HpyCH4III	ACNGT	7 cut(s)	411, 1099, 1368, 1423, 1769, 1855, 2448
HpyCH4IV	ACGT	8 cut(s)	1705, 2038, 2090, 2155, 2349, 2545, 2779, 3059
HpySE526I	ACGT	8 cut(s)	1705, 2038, 2090, 2155, 2349, 2545, 2779, 3059
Hsp92I	GRCGYC	3 cut(s)	45, 2349, 3127
HspAI	GCGC	2 cut(s)	253, 1983
KroI	GCCGGC	1 cut(s)	47
KroNI	GCCGGC	1 cut(s)	49
KspI	CCGCGG	1 cut(s)	259
LmnI	GCTCC	5 cut(s)	550, 874, 967, 1234, 2623
Lsp1109I	GCAGC	7 cut(s)	436, 586, 1691, 1694, 1879, 1996, 2110
MaeI	CTAG	6 cut(s)	222, 650, 1676, 1697, 2094, 2423
MaeII	ACGT	8 cut(s)	1705, 2038, 2090, 2155, 2349, 2545, 2779, 3059
MflI	RGATCY	4 cut(s)	361, 2521, 2567, 2812
MhlI	GDGCHC	6 cut(s)	81, 1360, 1944, 2238, 2377, 2836
MlyI	GAGTC	4 cut(s)	1037, 1714, 2950, 3107
MmeI	TCCRAC	3 cut(s)	439, 1350, 1969
Mph1103I	ATGCAT	1 cut(s)	895
MreI	CGCCGGCG	1 cut(s)	47
MroNI	GCCGGC	1 cut(s)	47
MroXI	GAANNNNTTC	3 cut(s)	336, 429, 2019
MseI	TTAA	4 cut(s)	579, 1094, 1284, 2943
MslI	CAYNNNNRTG	5 cut(s)	1469, 1753, 1947, 2907, 3036
MspA1I	CMGCKG	3 cut(s)	258, 492, 2278
MspI	CCGG	4 cut(s)	48, 216, 234, 365
MspR9I	CCNGG	7 cut(s)	294, 942, 972, 1239, 1415, 1914, 1979
Mva1269I	GAATGC	3 cut(s)	676, 921, 1442
MvaI	CCWGG	7 cut(s)	294, 942, 972, 1239, 1415, 1914, 1979
MvnI	CGCG	1 cut(s)	258
NaeI	GCCGGC	1 cut(s)	49
NdeI	CATATG	1 cut(s)	1963
NgoMIV	GCCGGC	1 cut(s)	47
NheI	GCTAGC	1 cut(s)	221
NmeAIII	GCCGAG	1 cut(s)	1568
NmuCI	GTSAC	6 cut(s)	1417, 1462, 2107, 2345, 2629, 2983
NsiI	ATGCAT	1 cut(s)	895
NspI	RCATGY	3 cut(s)	595, 893, 2637
PaeR7I	CTCGAG	1 cut(s)	1359
PasI	CCCWGGG	1 cut(s)	1978
PcsI	WCGNNNNNNNCGW	3 cut(s)	153, 162, 1357
PctI	GAATGC	3 cut(s)	676, 921, 1442
PdiI	GCCGGC	1 cut(s)	49
PdmI	GAANNNNTTC	3 cut(s)	336, 429, 2019
PfeI	GAWTC	7 cut(s)	325, 430, 761, 929, 1517, 1992, 2048
PflFI	GACNNNGTC	2 cut(s)	855, 2603
PflMI	CCANNNNNTGG	1 cut(s)	2668
PkrI	GCNGC	9 cut(s)	214, 257, 451, 601, 1681, 1684, 1894, 2011, 2125
PleI	GAGTC	4 cut(s)	1036, 1714, 2950, 3107
PmaCI	CACGTG	1 cut(s)	2780
PmlI	CACGTG	1 cut(s)	2780
PpsI	GAGTC	4 cut(s)	1036, 1714, 2950, 3107
Ppu21I	YACGTR	2 cut(s)	2546, 2780
PshAI	GACNNNNGTC	1 cut(s)	1799
Psp124BI	GAGCTC	1 cut(s)	81
Psp6I	CCWGG	7 cut(s)	292, 940, 970, 1237, 1413, 1912, 1977
PspCI	CACGTG	1 cut(s)	2780
PspEI	GGTNACC	2 cut(s)	1417, 1462
PspFI	CCCAGC	1 cut(s)	2896
PspGI	CCWGG	7 cut(s)	292, 940, 970, 1237, 1413, 1912, 1977
PspXI	VCTCGAGB	1 cut(s)	1359
PstNI	CAGNNNCTG	1 cut(s)	415
PsuI	RGATCY	4 cut(s)	361, 2521, 2567, 2812
PsyI	GACNNNGTC	2 cut(s)	855, 2603
PvuII	CAGCTG	1 cut(s)	2278
RsaI	GTAC	7 cut(s)	520, 610, 805, 1365, 1746, 1773, 2209
RsaNI	GTAC	7 cut(s)	519, 609, 804, 1364, 1745, 1772, 2208
RseI	CAYNNNNRTG	5 cut(s)	1469, 1753, 1947, 2907, 3036
SacI	GAGCTC	1 cut(s)	81
SacII	CCGCGG	1 cut(s)	259
SalI	GTCGAC	1 cut(s)	3129
SaqAI	TTAA	4 cut(s)	579, 1094, 1284, 2943
SatI	GCNGC	9 cut(s)	213, 256, 450, 600, 1680, 1683, 1893, 2010, 2124
SchI	GAGTC	4 cut(s)	1037, 1714, 2950, 3107
ScrFI	CCNGG	7 cut(s)	294, 942, 972, 1239, 1415, 1914, 1979
SduI	GDGCHC	6 cut(s)	81, 1360, 1944, 2238, 2377, 2836
SfcI	CTRYAG	3 cut(s)	300, 2103, 3154
Sfr274I	CTCGAG	1 cut(s)	1359
Sfr303I	CCGCGG	1 cut(s)	259
SgrAI	CRCCGGYG	2 cut(s)	47, 215
SgrBI	CCGCGG	1 cut(s)	259
SinI	GGWCC	7 cut(s)	296, 367, 621, 947, 2245, 2500, 3024
SlaI	CTCGAG	1 cut(s)	1359
SmiMI	CAYNNNNRTG	5 cut(s)	1469, 1753, 1947, 2907, 3036
SmlI	CTYRAG	3 cut(s)	1359, 1733, 2376
SmoI	CTYRAG	3 cut(s)	1359, 1733, 2376
SspI	AATATT	1 cut(s)	2134
SspMI	CTAG	6 cut(s)	222, 650, 1676, 1697, 2094, 2423
SstI	GAGCTC	1 cut(s)	81
StyD4I	CCNGG	7 cut(s)	292, 940, 970, 1237, 1413, 1912, 1977
StyI	CCWWGG	2 cut(s)	150, 2571
TaaI	ACNGT	7 cut(s)	411, 1099, 1368, 1423, 1769, 1855, 2448
TaiI	ACGT	8 cut(s)	1708, 2041, 2093, 2158, 2352, 2548, 2782, 3062
TatI	WGTACW	2 cut(s)	1771, 2207
TauI	GCSGC	2 cut(s)	215, 258
TfiI	GAWTC	7 cut(s)	325, 430, 761, 929, 1517, 1992, 2048
Tru1I	TTAA	4 cut(s)	579, 1094, 1284, 2943
Tru9I	TTAA	4 cut(s)	579, 1094, 1284, 2943
TscAI	CASTG	7 cut(s)	631, 720, 2350, 2463, 2634, 2832, 2933
TseFI	GTSAC	6 cut(s)	1417, 1462, 2107, 2345, 2629, 2983
TseI	GCWGC	7 cut(s)	449, 599, 1679, 1682, 1892, 2009, 2123
Tsp45I	GTSAC	6 cut(s)	1417, 1462, 2107, 2345, 2629, 2983
TspDTI	ATGAA	9 cut(s)	438, 1449, 1470, 1500, 1530, 1623, 1730, 1950, 2694
TspGWI	ACGGA	6 cut(s)	140, 887, 2253, 2630, 2705, 3037
TspRI	CASTG	7 cut(s)	631, 720, 2350, 2463, 2634, 2832, 2933
Tth111I	GACNNNGTC	2 cut(s)	855, 2603
Van91I	CCANNNNNTGG	1 cut(s)	2668
VneI	GTGCAC	1 cut(s)	1940
VpaK11BI	GGWCC	7 cut(s)	296, 367, 621, 947, 2245, 2500, 3024
XapI	RAATTY	6 cut(s)	1198, 1448, 1642, 1908, 2282, 2430
XbaI	TCTAGA	1 cut(s)	2093
XceI	RCATGY	3 cut(s)	595, 893, 2637
XhoI	CTCGAG	1 cut(s)	1359
XmiI	GTMKAC	2 cut(s)	3019, 3130
XmnI	GAANNNNTTC	3 cut(s)	336, 429, 2019
XspI	CTAG	6 cut(s)	222, 650, 1676, 1697, 2094, 2423
ZraI	GACGTC	1 cut(s)	2350
Zsp2I	ATGCAT	1 cut(s)	895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.