Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0004820

Physical Location & Seq

Genomic Coordinates Forward (+)

24232563 .. 24248431

Gene Structure 15869 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g25890.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3339 bp

ATGGCCGATCCTCTGGAGAGGCTGGGATCAGAGGCCGTAGGGAACGAATCGAACATCAAGGACGAACTCTCCATGGAGATCGATCCTCCTTTCAAAGAAAACACCGCCACCGCCGACGACTGGAGAAATGCGCTCAGCAAGGTCGTCCCCGCCGTCGTCGTTCTGCGGACAACCGCCTGTCGTGCTTTTGACACTGAGGCCGCTGGTGCTAGCTATGCCACCGGCTTCATCGTCGATAAGCGCCGCGGGATCATCCTCACCAATCGACATGTTGTCAAGCCTGGACCTGTAGTTGCAGAAGCTATGTTTGTGAACCGTGAGGAAATTCCAGTATATCCTATATACAGGGATCCAGTCCATGATTTTGGCTTCTTTTGTTATGATCCTAGTGCAGTACAATTTCTTAGTTATGAGGAGATTCCTCTGGCCCCTGAGGCTGCTTGTGTTGGACTAGAAATCAGGGTTGTTGGTAATGATAGTGGTGAGAAGGTCTCAATTTTGGCTGGTACTATTGCTCGTTTGGATAGAGATGCTCCACATTACAAAAAGGATGGTTATAATGACTTCAATACCTTCTACATGCAAGCTGCATCTGGTACTAAAGGTGGTTCCAGTGGATCTCCTGTGATTGATTGGCTAGGCAGGGCGGTGGCCTTGAATGCTGGTAGCAAGTCATCAAGTGCTTCAGCTTTTTTCTTACCACTAGAACGAGTTGTGAGGGCATTGAACTATCTCCAGAAAGGCAGAGATTCCTTTGTCAATAAATGGGAGGCAGTCTCTATACCTCGTGGTACGCTTCAGGTGACATTTGTCCATAAAGGATTTGATGAGACACGCCGGCTTGGTCTTCAAAGTGAAACAGAGCAGTTAGTTCGTCATGCATCTCCCGAGGGTGAAACTGGGATGCTGGTTGTTGACTCTGTGGTTCCAGGTGGTCCGGCATACAAGTGTTTGGAGCCAGGTGATGTACTTGTTTGCATGAATGGGAAAGTAATTACCCAATTCCTAAAATTGGAGACTTTACTTGATGACAGTGTCAATCAAAAGATTGAATTACAGATTGAAAGGGGTGGCACACAATTAACTGTTAACTTGACGGTGCAAGATTTACACTCAATAACCCCTAATTACTTCTTGGAAGTAAGTGGTGGAGTGATTCAACCTCTCTCGTACCAACAGGCTAGAAATTTTCGTTTCCCTTGTGGCCTTGTATATGTGACAGAACCAGGATATATGCTCCTTAGAGCTGGAGTTCCTCGCCATGCTATCATTAAGAAGTTTGCTGGTGAGGAAATATCACGACTTGAGGATCTAATCTCAGTTCTATGCAAGCTATCTCGTGGTGCTCGAGTGCCATTAGAGTATATAAGCTACATGGATCGTCATCGAAGGAAGTCAGTCCTGGTCACGGTTGATCGCCATGAATGGTATGCGCCTCCACAGATATACACTCGTGATGATTGTACTGGTCTTTGGACTGCTAAGCCTGTGTTTCAACATGATGGTAATCTACAATCATCTGGTATCAATGAACTCGGAGGTACAGGAAGCCAAGCAGTTCCGCTGAGTAGTGAAGTCACTTCCCTGGTAGACATGCAGCACAATAGCCACGAGCAATTGACTGATGGTGTCACCAGTATGGAAACCAGTTATGAGCACGTATCTGAAGGAGCACATTGTAGGGATGAACTGGATGTTGAAACAAAGAAAAGGCGAGTGAAGGAGGGTTTTCCTGCTGATGGAAATGTTGTTGCTGACTGTTCTTTTCCTGAAGCAAATGACAGTAAGCTGGATGATCCAAATACTATGGAGAATGCTGTTCTGAGAGACTTTGAAGGTGCAAATGTAGCAACTGCTAATGCTTCGTTAGCTGAACGTGTTATAGAGCCGACTCTCGTTATGCTTGAGGTTCATGTGCCACCTTCATGTATGCTTGATGGTGTACATTCACAACATTTTTTCGGGACTGGTGTCATCATCTATCATTCTGAAAACATGGGATTGGTTGCTGTTGACAAGAACACAGTTGCAATAGCTGCATCTGATGTGATGCTTTCATTTGCTGCTTTTCCAATTGAAATTCCTGGCGAGGTGGTTTTTCTCCACCCTGTTCACAATTATGCTCTCATTTCGTATGATCCCTTGGCCCTGGGAACTGTTGGTTCGTCTGCTGTTCGTGCTGCTGAACTACTTCCTGAGCCTGCATTGCGTCGGGGGGATTCTGTGTATCTTGTGGGGTTAAGTAGAAGCCTACAAGCAACATCTAGAAAGTCAATTGTAACTAACCCATGTGCTGCATTAAATATTGGATCTGCTGATTGTCCACGGTACAGAGCAACCAATATGGAAGTCATTGAGCTTGATACTGATTTTGGCAGTACATTTTCTGGTGTACTAACTGATGAGTATGGAAGGGTTCAAGCCATCTGGGGTAGCTTTTCAACTCAGCTAAAATTTGGTGGCAGTAGCTCCGAAGATCATCAGTTTGTTAGAGGTCTCCCTATTTATTCAATCAGTCAAGTCCTAGAAAAAATTATTTCTGGTGCTCAAGGCCCTCCTCTTCTCATAAATCGTGTCAAAAGGCCAATGCCTCTTGTGAGAATTTTAGAGGTTGAACTATATCCTACATTGCTTTCAAAAGCCCGAAGCTTTGGACTGAGTGATGATTGGGTCCAAGCTCTTGTTAAGAAAGATCCGATTAGACGACAAGTTTTACGTGTCAAAGGATGTTTAGCTGGATCTAAAGCCGAAACTCTGTTAGAACAAGGAGACATGGTTTTGGCGATCAATAAGGAGCCGGTTACATGTTTCTCCGATGTCGAAAATGTCTGCCAAGCACTAGATAAAAGTGAAAACAACGATGGCCAGCTTGACATGACCATTTTTCGCCAGGGGCGTGAAATCAATCTTCTTGTGGGAACGGATGTTAGGGATGGAAGTGGTACTACTCGTGTAATAAATTGGTGTGGATGTATCGTTCAGGATCCTCATCCAGCAGTGCGTGCTCTTGGGTTTCTTCCAGATGAAGGTCATGGCGTATATGTCGCGAGGTGGTGTCATGGTAGTCCAGTGCATAGATATGGTCTATATGCTCTTCAGTGGATTGTTGAAGTTAATGGAAAAAAGACTCCTGATTTAGATGCTTTCGTGGATGTAACAAAGGAATTGGAACACGGACAGTTTGTTCGTGTGAGGACAGTCCATCTAAATGGGAAGCCGAGAGTTCTAACATTGAAACAGGACTTGCACTACTGGCCCACATGGGAGTTGAGATTTGATCCTGATTCTGCCATCTGGGGTCGAAAGACGATAAAGGCGCTAGATTATACTAGTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009642 GO:0009644 GO:0009892 GO:0010109 GO:0010205 GO:0016787 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0042548 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0071704 GO:0140096 GO:1901564 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_1 PDZ_2 Trypsin_2

Protein Analysis

1113

Amino Acids

122.44

Weight (kDa)

5.54

Isoelectric Point (pI)

38.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03380 AT3G03380
fragaria_vesca	FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890 FvH4_5g27890
malus_domestica	MD17G1256700.v1.1
prunus_persica	Prupe.3G159400_v2.0.a1 Prupe.3G159400_v2.0.a1 Prupe.3G159400_v2.0.a1 Prupe.3G159400_v2.0.a1
pyrus_communis	pycom17g25890
rosa_chinensis	RchiOBHm_Chr7g0220101
rosa_laevigata	RLG00000002258
rosa_multiflora	Rmu_sc0007553.1_g000006 Rmu_sc0018981.1_g000001
rosa_roxburghii	Rroxscaffold_3G00239790
rosa_rugosa	Rorug07G0188800 Rorug07G0188900 Rorug07G0188900 Rorug07G0189000
rosa_samantha	Rh7AG332500 Rh7BG322400 Rh7CG350000 Rh7DG328200
rosa_wichuraiana	Rw7G028000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	558
AccI	GTMKAC	1 cut(s)	1590
AccII	CGCG	2 cut(s)	246, 3047
AcoI	YGGCCR	2 cut(s)	3, 2863
AcsI	RAATTY	5 cut(s)	324, 1186, 2079, 2453, 2601
AcuI	CTGAAG	5 cut(s)	669, 782, 1686, 1791, 3080
AfiI	CCNNNNNNNGG	5 cut(s)	120, 1012, 1408, 1739, 3026
AflIII	ACRYGT	4 cut(s)	268, 1876, 2716, 2804
AhdI	GACNNNNNGTC	1 cut(s)	272
AhlI	ACTAGT	1 cut(s)	3329
AjnI	CCWGG	9 cut(s)	280, 928, 958, 1225, 1401, 1584, 2083, 2148, 2889
AloI	GAACNNNNNNTCC	4 cut(s)	2961, 2993, 3168, 3200
Alw21I	GWGCWC	5 cut(s)	1348, 1659, 1675, 2548, 3007
Alw26I	GTCTC	7 cut(s)	496, 781, 824, 1010, 1821, 2501, 2763
Ama87I	CYCGRG	2 cut(s)	887, 1347
ApeKI	GCWGC	7 cut(s)	437, 587, 1597, 2036, 2063, 2180, 2294
ApoI	RAATTY	5 cut(s)	324, 1186, 2079, 2453, 2601
ArsI	GACNNNNNNTTYG	2 cut(s)	3168, 3200
Asp700I	GAANNNNTTC	1 cut(s)	2190
AspLEI	GCGC	4 cut(s)	133, 243, 1435, 3319
AspS9I	GGNCC	7 cut(s)	284, 427, 935, 2146, 2552, 2671, 3255
AsuHPI	GGTGA	7 cut(s)	250, 494, 814, 905, 974, 1298, 1624
AsuNHI	GCTAGC	1 cut(s)	209
AvaI	CYCGRG	2 cut(s)	887, 1347
AvaII	GGWCC	3 cut(s)	284, 935, 2671
AxyI	CCTNAGG	1 cut(s)	432
BalI	TGGCCA	1 cut(s)	2865
BamHI	GGATCC	2 cut(s)	349, 2983
BarI	GAAGNNNNNNTAC	2 cut(s)	2929, 2961
BauI	CACGAG	5 cut(s)	786, 1338, 1452, 1610, 2949
BbsI	GAAGAC	1 cut(s)	839
Bbv12I	GWGCWC	5 cut(s)	1348, 1659, 1675, 2548, 3007
BbvI	GCAGC	7 cut(s)	424, 574, 1609, 2023, 2050, 2167, 2281
BceAI	ACGGC	2 cut(s)	20, 137
BcgI	CGANNNNNNTGC	2 cut(s)	854, 888
BciT130I	CCWGG	9 cut(s)	282, 930, 960, 1227, 1403, 1586, 2085, 2150, 2891
BcoDI	GTCTC	7 cut(s)	496, 781, 824, 1010, 1821, 2501, 2763
BcuI	ACTAGT	1 cut(s)	3329
BfmI	CTRYAG	1 cut(s)	288
BfoI	RGCGCY	2 cut(s)	244, 3320
BglI	GCCNNNNNGGC	1 cut(s)	434
BisI	GCNGC	9 cut(s)	201, 244, 438, 588, 1598, 2037, 2064, 2181, 2295
BlpI	GCTNAGC	2 cut(s)	134, 1482
BlsI	GCNGC	9 cut(s)	202, 245, 439, 589, 1599, 2038, 2065, 2182, 2296
Bme1390I	CCNGG	9 cut(s)	282, 930, 960, 1227, 1403, 1586, 2085, 2150, 2891
Bme18I	GGWCC	3 cut(s)	284, 935, 2671
BmeRI	GACNNNNNGTC	1 cut(s)	272
BmeT110I	CYCGRG	2 cut(s)	887, 1347
BmgT120I	GGNCC	7 cut(s)	284, 427, 935, 2146, 2552, 2671, 3255
BmiI	GGNNCC	8 cut(s)	351, 429, 610, 927, 957, 2672, 2796, 2985
BmrFI	CCNGG	9 cut(s)	282, 930, 960, 1227, 1403, 1586, 2085, 2150, 2891
BmrI	ACTGGG	1 cut(s)	909
BmsI	GCATC	7 cut(s)	520, 599, 890, 894, 2040, 2048, 3130
BmtI	GCTAGC	1 cut(s)	213
BmuI	ACTGGG	1 cut(s)	909
BoxI	GACNNNNGTC	2 cut(s)	809, 1970
BpiI	GAAGAC	1 cut(s)	839
BplI	GAGNNNNNCTC	4 cut(s)	476, 508, 761, 793
BpmI	CTGGAG	4 cut(s)	35, 142, 719, 1269
Bpu10I	CCTNAGC	1 cut(s)	2196
Bpu1102I	GCTNAGC	2 cut(s)	134, 1482
BpuEI	CTTGAG	3 cut(s)	1325, 1925, 2532
Bsa29I	ATCGAT	1 cut(s)	81
BsaAI	YACGTR	2 cut(s)	1660, 2717
BsaBI	GATNNNNATC	3 cut(s)	1383, 1506, 2988
BsaI	GGTCTC	2 cut(s)	496, 2501
BsaJI	CCNNGG	9 cut(s)	72, 244, 888, 1584, 2142, 2148, 2149, 2324, 2890
BsaXI	ACNNNNNCTCC	4 cut(s)	53, 83, 2760, 2790
Bsc4I	CCNNNNNNNGG	5 cut(s)	120, 1012, 1408, 1739, 3026
Bse118I	RCCGGY	3 cut(s)	221, 837, 2797
Bse21I	CCTNAGG	1 cut(s)	432
Bse3DI	GCAATG	2 cut(s)	2204, 2627
Bse8I	GATNNNNATC	3 cut(s)	1383, 1506, 2988
BseBI	CCWGG	9 cut(s)	282, 930, 960, 1227, 1403, 1586, 2085, 2150, 2891
BseCI	ATCGAT	1 cut(s)	81
BseDI	CCNNGG	9 cut(s)	72, 244, 888, 1584, 2142, 2148, 2149, 2324, 2890
BseJI	GATNNNNATC	3 cut(s)	1383, 1506, 2988
BseLI	CCNNNNNNNGG	5 cut(s)	120, 1012, 1408, 1739, 3026
BseMI	GCAATG	2 cut(s)	2204, 2627
BseMII	CTCAG	9 cut(s)	148, 186, 423, 1332, 1556, 1814, 2187, 2459, 2648
BseRI	GAGGAG	2 cut(s)	428, 2547
BseXI	GCAGC	7 cut(s)	424, 574, 1609, 2023, 2050, 2167, 2281
BseYI	CCCAGC	1 cut(s)	22
BsgI	GTGCAG	1 cut(s)	411
Bsh1236I	CGCG	2 cut(s)	246, 3047
BshVI	ATCGAT	1 cut(s)	81
BsiHKAI	GWGCWC	5 cut(s)	1348, 1659, 1675, 2548, 3007
BsiHKCI	CYCGRG	2 cut(s)	887, 1347
BsiSI	CCGG	4 cut(s)	222, 838, 938, 2798
BslFI	GGGAC	2 cut(s)	131, 1978
BslI	CCNNNNNNNGG	5 cut(s)	120, 1012, 1408, 1739, 3026
BsmAI	GTCTC	7 cut(s)	496, 781, 824, 1010, 1821, 2501, 2763
BsmFI	GGGAC	2 cut(s)	131, 1978
BsmI	GAATGC	2 cut(s)	664, 1819
Bso31I	GGTCTC	2 cut(s)	496, 2501
BsoBI	CYCGRG	2 cut(s)	887, 1347
Bsp1286I	GDGCHC	5 cut(s)	1348, 1659, 1675, 2548, 3007
Bsp1407I	TGTACA	1 cut(s)	1942
Bsp1720I	GCTNAGC	2 cut(s)	134, 1482
Bsp19I	CCATGG	1 cut(s)	72
Bsp68I	TCGCGA	1 cut(s)	3047
BspCNI	CTCAG	9 cut(s)	147, 187, 424, 1331, 1557, 1815, 2188, 2458, 2649
BspDI	ATCGAT	1 cut(s)	81
BspFNI	CGCG	2 cut(s)	246, 3047
BspLI	GGNNCC	8 cut(s)	351, 429, 610, 927, 957, 2672, 2796, 2985
BspOI	GCTAGC	1 cut(s)	213
BspQI	GCTCTTC	1 cut(s)	3099
BspTNI	GGTCTC	2 cut(s)	496, 2501
BsrDI	GCAATG	2 cut(s)	2204, 2627
BsrFI	RCCGGY	3 cut(s)	221, 837, 2797
BsrGI	TGTACA	1 cut(s)	1942
BssAI	RCCGGY	3 cut(s)	221, 837, 2797
BssECI	CCNNGG	9 cut(s)	72, 244, 888, 1584, 2142, 2148, 2149, 2324, 2890
BssSI	CACGAG	5 cut(s)	786, 1338, 1452, 1610, 2949
BssT1I	CCWWGG	2 cut(s)	72, 2142
Bst2BI	CACGAG	5 cut(s)	786, 1338, 1452, 1610, 2949
Bst2UI	CCWGG	9 cut(s)	282, 930, 960, 1227, 1403, 1586, 2085, 2150, 2891
Bst6I	CTCTTC	2 cut(s)	2565, 3099
BstAPI	GCANNNNNTGC	2 cut(s)	2036, 3002
BstAUI	TGTACA	1 cut(s)	1942
BstBAI	YACGTR	2 cut(s)	1660, 2717
BstC8I	GCNNGC	7 cut(s)	211, 585, 839, 1331, 2202, 2867, 3003
BstDSI	CCRYGG	3 cut(s)	72, 244, 2324
BstFNI	CGCG	2 cut(s)	246, 3047
BstH2I	RGCGCY	2 cut(s)	244, 3320
BstHHI	GCGC	4 cut(s)	133, 243, 1435, 3319
BstMAI	GTCTC	7 cut(s)	496, 781, 824, 1010, 1821, 2501, 2763
BstNI	CCWGG	9 cut(s)	282, 930, 960, 1227, 1403, 1586, 2085, 2150, 2891
BstNSI	RCATGY	4 cut(s)	272, 583, 1597, 2808
BstPAI	GACNNNNGTC	2 cut(s)	809, 1970
BstSCI	CCNGG	9 cut(s)	280, 928, 958, 1225, 1401, 1584, 2083, 2148, 2889
BstSFI	CTRYAG	1 cut(s)	288
BstUI	CGCG	2 cut(s)	246, 3047
BstV1I	GCAGC	7 cut(s)	424, 574, 1609, 2023, 2050, 2167, 2281
BstV2I	GAAGAC	1 cut(s)	839
BstX2I	RGATCY	7 cut(s)	349, 617, 1309, 2309, 2692, 2738, 2983
BstXI	CCANNNNNNTGG	2 cut(s)	365, 3209
BstYI	RGATCY	7 cut(s)	349, 617, 1309, 2309, 2692, 2738, 2983
Bsu15I	ATCGAT	1 cut(s)	81
Bsu36I	CCTNAGG	1 cut(s)	432
BsuTUI	ATCGAT	1 cut(s)	81
BtgI	CCRYGG	3 cut(s)	72, 244, 2324
BtsI	GCAGTG	1 cut(s)	3003
BtsIMutI	CAGTG	6 cut(s)	192, 619, 1039, 3003, 3075, 3104
BtuMI	TCGCGA	1 cut(s)	3047
Cac8I	GCNNGC	7 cut(s)	211, 585, 839, 1331, 2202, 2867, 3003
CfoI	GCGC	4 cut(s)	133, 243, 1435, 3319
Cfr10I	RCCGGY	3 cut(s)	221, 837, 2797
Cfr13I	GGNCC	7 cut(s)	284, 427, 935, 2146, 2552, 2671, 3255
Cfr42I	CCGCGG	1 cut(s)	247
ClaI	ATCGAT	1 cut(s)	81
CseI	GACGC	1 cut(s)	2198
DriI	GACNNNNNGTC	1 cut(s)	272
EaeI	YGGCCR	2 cut(s)	3, 2863
Eam1104I	CTCTTC	2 cut(s)	2565, 3099
Eam1105I	GACNNNNNGTC	1 cut(s)	272
EarI	CTCTTC	2 cut(s)	2565, 3099
Eco130I	CCWWGG	2 cut(s)	72, 2142
Eco31I	GGTCTC	2 cut(s)	496, 2501
Eco47I	GGWCC	3 cut(s)	284, 935, 2671
Eco57I	CTGAAG	5 cut(s)	669, 782, 1686, 1791, 3080
Eco81I	CCTNAGG	1 cut(s)	432
Eco88I	CYCGRG	2 cut(s)	887, 1347
EcoO109I	RGGNCCY	1 cut(s)	2552
EcoRII	CCWGG	9 cut(s)	280, 928, 958, 1225, 1401, 1584, 2083, 2148, 2889
EcoT14I	CCWWGG	2 cut(s)	72, 2142
EcoT22I	ATGCAT	1 cut(s)	883
ErhI	CCWWGG	2 cut(s)	72, 2142
FaqI	GGGAC	2 cut(s)	131, 1978
FauI	CCCGC	2 cut(s)	157, 239
FblI	GTMKAC	1 cut(s)	1590
Fnu4HI	GCNGC	9 cut(s)	201, 244, 438, 588, 1598, 2037, 2064, 2181, 2295
Fsp4HI	GCNGC	9 cut(s)	201, 244, 438, 588, 1598, 2037, 2064, 2181, 2295
GlaI	GCGC	4 cut(s)	132, 242, 1434, 3318
GluI	GCNGC	9 cut(s)	201, 244, 438, 588, 1598, 2037, 2064, 2181, 2295
GsaI	CCCAGC	1 cut(s)	26
GsuI	CTGGAG	4 cut(s)	35, 142, 719, 1269
HaeII	RGCGCY	2 cut(s)	244, 3320
HapII	CCGG	4 cut(s)	222, 838, 938, 2798
HgaI	GACGC	1 cut(s)	2198
HhaI	GCGC	4 cut(s)	133, 243, 1435, 3319
Hin6I	GCGC	4 cut(s)	131, 241, 1433, 3317
HinP1I	GCGC	4 cut(s)	131, 241, 1433, 3317
HincII	GTYRAC	3 cut(s)	916, 1090, 2014
HindII	GTYRAC	3 cut(s)	916, 1090, 2014
HindIII	AAGCTT	1 cut(s)	2647
HinfI	GANTC	9 cut(s)	47, 418, 749, 917, 1156, 1891, 2219, 3127, 3284
HpaI	GTTAAC	1 cut(s)	1090
HpaII	CCGG	4 cut(s)	222, 838, 938, 2798
HphI	GGTGA	7 cut(s)	250, 494, 814, 905, 974, 1298, 1624
Hpy166II	GTNNAC	9 cut(s)	313, 916, 1090, 1591, 1943, 2014, 2113, 2324, 2393
Hpy188I	TCNGA	9 cut(s)	31, 1538, 1666, 1824, 1990, 2044, 2473, 2697, 2815
Hpy8I	GTNNAC	9 cut(s)	313, 916, 1090, 1591, 1943, 2014, 2113, 2324, 2393
Hpy99I	CGWCG	5 cut(s)	119, 158, 161, 236, 2214
HpyAV	CCTTC	9 cut(s)	481, 583, 1383, 1661, 1714, 1829, 1932, 2406, 3020
HpyCH4IV	ACGT	3 cut(s)	1659, 1876, 2716
HpySE526I	ACGT	3 cut(s)	1659, 1876, 2716
HspAI	GCGC	4 cut(s)	131, 241, 1433, 3317
KroI	GCCGGC	1 cut(s)	837
KroNI	GCCGGC	1 cut(s)	839
KspAI	GTTAAC	1 cut(s)	1090
KspI	CCGCGG	1 cut(s)	247
LguI	GCTCTTC	1 cut(s)	3099
LmnI	GCTCC	6 cut(s)	538, 955, 1242, 1670, 2474, 2794
Lsp1109I	GCAGC	7 cut(s)	424, 574, 1609, 2023, 2050, 2167, 2281
LweI	GCATC	7 cut(s)	520, 599, 890, 894, 2040, 2048, 3130
MaeII	ACGT	3 cut(s)	1659, 1876, 2716
MaeIII	GTNAC	8 cut(s)	802, 1216, 1405, 1576, 1630, 2278, 2800, 3154
MboII	GAAGA	6 cut(s)	839, 2486, 2552, 2900, 3008, 3086
MfeI	CAATTG	3 cut(s)	1616, 2073, 2274
MflI	RGATCY	7 cut(s)	349, 617, 1309, 2309, 2692, 2738, 2983
MhlI	GDGCHC	5 cut(s)	1348, 1659, 1675, 2548, 3007
MlsI	TGGCCA	1 cut(s)	2865
MluNI	TGGCCA	1 cut(s)	2865
MlyI	GAGTC	3 cut(s)	911, 1885, 3121
MmeI	TCCRAC	1 cut(s)	427
Mox20I	TGGCCA	1 cut(s)	2865
Mph1103I	ATGCAT	1 cut(s)	883
MroNI	GCCGGC	1 cut(s)	837
MroXI	GAANNNNTTC	1 cut(s)	2190
MscI	TGGCCA	1 cut(s)	2865
MseI	TTAA	7 cut(s)	1082, 1089, 1272, 2240, 2300, 2685, 3114
MslI	CAYNNNNRTG	6 cut(s)	946, 1637, 1924, 2118, 3078, 3207
Msp20I	TGGCCA	1 cut(s)	2865
MspA1I	CMGCKG	3 cut(s)	203, 246, 1564
MspI	CCGG	4 cut(s)	222, 838, 938, 2798
MspR9I	CCNGG	9 cut(s)	282, 930, 960, 1227, 1403, 1586, 2085, 2150, 2891
MunI	CAATTG	3 cut(s)	1616, 2073, 2274
Mva1269I	GAATGC	2 cut(s)	664, 1819
MvaI	CCWGG	9 cut(s)	282, 930, 960, 1227, 1403, 1586, 2085, 2150, 2891
MvnI	CGCG	2 cut(s)	246, 3047
NaeI	GCCGGC	1 cut(s)	839
NcoI	CCATGG	1 cut(s)	72
NgoMIV	GCCGGC	1 cut(s)	837
NheI	GCTAGC	1 cut(s)	209
NlaIV	GGNNCC	8 cut(s)	351, 429, 610, 927, 957, 2672, 2796, 2985
NmeAIII	GCCGAG	1 cut(s)	3243
NmuCI	GTSAC	5 cut(s)	802, 1216, 1405, 1576, 1630
NruI	TCGCGA	1 cut(s)	3047
NsiI	ATGCAT	1 cut(s)	883
NspI	RCATGY	4 cut(s)	272, 583, 1597, 2808
PaeR7I	CTCGAG	1 cut(s)	1347
PasI	CCCWGGG	1 cut(s)	2149
PciI	ACATGT	2 cut(s)	268, 2804
PciSI	GCTCTTC	1 cut(s)	3099
PcsI	WCGNNNNNNNCGW	3 cut(s)	150, 1345, 2893
PctI	GAATGC	2 cut(s)	664, 1819
PdiI	GCCGGC	1 cut(s)	839
PdmI	GAANNNNTTC	1 cut(s)	2190
PfeI	GAWTC	6 cut(s)	47, 418, 749, 1156, 2219, 3284
PflFI	GACNNNGTC	1 cut(s)	1034
PkrI	GCNGC	9 cut(s)	202, 245, 439, 589, 1599, 2038, 2065, 2182, 2296
PleI	GAGTC	3 cut(s)	911, 1885, 3121
PpsI	GAGTC	3 cut(s)	911, 1885, 3121
Ppu21I	YACGTR	2 cut(s)	1660, 2717
PscI	ACATGT	2 cut(s)	268, 2804
PshAI	GACNNNNGTC	2 cut(s)	809, 1970
PsiI	TTATAA	1 cut(s)	558
Psp6I	CCWGG	9 cut(s)	280, 928, 958, 1225, 1401, 1584, 2083, 2148, 2889
PspFI	CCCAGC	1 cut(s)	22
PspGI	CCWGG	9 cut(s)	280, 928, 958, 1225, 1401, 1584, 2083, 2148, 2889
PspN4I	GGNNCC	8 cut(s)	351, 429, 610, 927, 957, 2672, 2796, 2985
PspPI	GGNCC	7 cut(s)	284, 427, 935, 2146, 2552, 2671, 3255
PspXI	VCTCGAGB	1 cut(s)	1347
PsuI	RGATCY	7 cut(s)	349, 617, 1309, 2309, 2692, 2738, 2983
PsyI	GACNNNGTC	1 cut(s)	1034
RruI	TCGCGA	1 cut(s)	3047
RseI	CAYNNNNRTG	6 cut(s)	946, 1637, 1924, 2118, 3078, 3207
SacII	CCGCGG	1 cut(s)	247
SapI	GCTCTTC	1 cut(s)	3099
SaqAI	TTAA	7 cut(s)	1082, 1089, 1272, 2240, 2300, 2685, 3114
SatI	GCNGC	9 cut(s)	201, 244, 438, 588, 1598, 2037, 2064, 2181, 2295
Sau96I	GGNCC	7 cut(s)	284, 427, 935, 2146, 2552, 2671, 3255
SchI	GAGTC	3 cut(s)	911, 1885, 3121
ScrFI	CCNGG	9 cut(s)	282, 930, 960, 1227, 1403, 1586, 2085, 2150, 2891
SduI	GDGCHC	5 cut(s)	1348, 1659, 1675, 2548, 3007
SfaNI	GCATC	7 cut(s)	520, 599, 890, 894, 2040, 2048, 3130
SfcI	CTRYAG	1 cut(s)	288
Sfr274I	CTCGAG	1 cut(s)	1347
Sfr303I	CCGCGG	1 cut(s)	247
SgrBI	CCGCGG	1 cut(s)	247
SinI	GGWCC	3 cut(s)	284, 935, 2671
SlaI	CTCGAG	1 cut(s)	1347
SmiMI	CAYNNNNRTG	6 cut(s)	946, 1637, 1924, 2118, 3078, 3207
SmlI	CTYRAG	4 cut(s)	1304, 1347, 1904, 2547
SmoI	CTYRAG	4 cut(s)	1304, 1347, 1904, 2547
SpeI	ACTAGT	1 cut(s)	3329
SspI	AATATT	1 cut(s)	2305
StyD4I	CCNGG	9 cut(s)	280, 928, 958, 1225, 1401, 1584, 2083, 2148, 2889
StyI	CCWWGG	2 cut(s)	72, 2142
TaiI	ACGT	3 cut(s)	1662, 1879, 2719
TaqI	TCGA	8 cut(s)	50, 81, 234, 265, 1348, 1387, 2820, 3301
TatI	WGTACW	6 cut(s)	394, 967, 1463, 1942, 2378, 2392
TauI	GCSGC	2 cut(s)	203, 246
TfiI	GAWTC	6 cut(s)	47, 418, 749, 1156, 2219, 3284
Tru1I	TTAA	7 cut(s)	1082, 1089, 1272, 2240, 2300, 2685, 3114
Tru9I	TTAA	7 cut(s)	1082, 1089, 1272, 2240, 2300, 2685, 3114
TscAI	CASTG	6 cut(s)	199, 619, 1039, 3003, 3075, 3104
TseFI	GTSAC	5 cut(s)	802, 1216, 1405, 1576, 1630
TseI	GCWGC	7 cut(s)	437, 587, 1597, 2036, 2063, 2180, 2294
Tsp45I	GTSAC	5 cut(s)	802, 1216, 1405, 1576, 1630
TspDTI	ATGAA	9 cut(s)	217, 995, 1437, 1545, 1701, 1901, 1914, 2046, 3039
TspGWI	ACGGA	2 cut(s)	2936, 3189
TspRI	CASTG	6 cut(s)	199, 619, 1039, 3003, 3075, 3104
Tth111I	GACNNNGTC	1 cut(s)	1034
VpaK11BI	GGWCC	3 cut(s)	284, 935, 2671
XapI	RAATTY	5 cut(s)	324, 1186, 2079, 2453, 2601
XbaI	TCTAGA	1 cut(s)	2264
XceI	RCATGY	4 cut(s)	272, 583, 1597, 2808
XhoI	CTCGAG	1 cut(s)	1347
XmiI	GTMKAC	1 cut(s)	1590
XmnI	GAANNNNTTC	1 cut(s)	2190
Zsp2I	ATGCAT	1 cut(s)	883

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.