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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g03170 FvH4_6g03180 |
| malus_domestica | MD04G1222300.v1.1 MD04G1222400.v1.1 MD12G1238500.v1.1 |
| prunus_persica | Prupe.6G341400_v2.0.a1 |
| pyrus_communis | pycom04g19670 pycom12g21920 |
| rosa_chinensis | RchiOBHm_Chr3g0451431 RchiOBHm_Chr3g0451451 |
| rosa_laevigata | RLG00000025659 RLG00000025660 |
| rosa_multiflora | Rmu_sc0002575.1_g000001 Rmu_sc0009360.1_g000055 Rmu_sc0021369.1_g000004 Rmu_ssc0000091.1_g000020 |
| rosa_roxburghii | Rroxscaffold_164G00436480 Rroxscaffold_6G00428850 |
| rosa_rugosa | Rorug02G0633900 |
| rosa_samantha | Rh3AG036800 Rh3AG036900 Rh3BG037400 Rh3CG036000 Rh3DG036900 Rh3DG037000 |
| rosa_wichuraiana | Rw3G002720 Rw3G002730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 185 |
| Acc36I | ACCTGC | 1 cut(s) | 185 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 598 |
| AclWI | GGATC | 1 cut(s) | 332 |
| AcoI | YGGCCR | 1 cut(s) | 77 |
| AcsI | RAATTY | 1 cut(s) | 587 |
| AcuI | CTGAAG | 1 cut(s) | 231 |
| AcyI | GRCGYC | 2 cut(s) | 153, 444 |
| AfaI | GTAC | 3 cut(s) | 269, 370, 529 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 598 |
| AflII | CTTAAG | 1 cut(s) | 227 |
| AgsI | TTSAA | 2 cut(s) | 299, 482 |
| AhlI | ACTAGT | 1 cut(s) | 524 |
| AleI | CACNNNNGTG | 1 cut(s) | 406 |
| AluBI | AGCT | 3 cut(s) | 32, 147, 566 |
| AluI | AGCT | 3 cut(s) | 32, 147, 566 |
| AlwI | GGATC | 1 cut(s) | 332 |
| AoxI | GGCC | 2 cut(s) | 77, 168 |
| ApeKI | GCWGC | 3 cut(s) | 144, 494, 628 |
| ApoI | RAATTY | 1 cut(s) | 587 |
| AspLEI | GCGC | 1 cut(s) | 163 |
| AsuHPI | GGTGA | 1 cut(s) | 393 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 360, 393 |
| BbvI | GCAGC | 3 cut(s) | 156, 506, 615 |
| BccI | CCATC | 4 cut(s) | 189, 533, 592, 604 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 140, 174 |
| BcuI | ACTAGT | 1 cut(s) | 524 |
| BfaI | CTAG | 1 cut(s) | 525 |
| BfmI | CTRYAG | 2 cut(s) | 463, 603 |
| BfrI | CTTAAG | 1 cut(s) | 227 |
| BfuAI | ACCTGC | 1 cut(s) | 185 |
| BisI | GCNGC | 3 cut(s) | 145, 495, 629 |
| BlsI | GCNGC | 3 cut(s) | 146, 496, 630 |
| BpmI | CTGGAG | 1 cut(s) | 284 |
| BsaHI | GRCGYC | 2 cut(s) | 153, 444 |
| BsaJI | CCNNGG | 1 cut(s) | 499 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 598 |
| Bse1I | ACTGG | 4 cut(s) | 80, 156, 267, 592 |
| BseDI | CCNNGG | 1 cut(s) | 499 |
| BseGI | GGATG | 2 cut(s) | 200, 246 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 598 |
| BseMII | CTCAG | 1 cut(s) | 435 |
| BseNI | ACTGG | 4 cut(s) | 80, 156, 267, 592 |
| BseXI | GCAGC | 3 cut(s) | 156, 506, 615 |
| BsgI | GTGCAG | 2 cut(s) | 241, 513 |
| BshFI | GGCC | 2 cut(s) | 79, 170 |
| BsiSI | CCGG | 1 cut(s) | 80 |
| BslFI | GGGAC | 1 cut(s) | 299 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 598 |
| BsmFI | GGGAC | 1 cut(s) | 299 |
| BsmI | GAATGC | 1 cut(s) | 476 |
| BsnI | GGCC | 2 cut(s) | 79, 170 |
| Bsp143I | GATC | 2 cut(s) | 223, 337 |
| BspANI | GGCC | 2 cut(s) | 79, 170 |
| BspCNI | CTCAG | 1 cut(s) | 434 |
| BspMI | ACCTGC | 1 cut(s) | 185 |
| BspPI | GGATC | 1 cut(s) | 332 |
| BspTI | CTTAAG | 1 cut(s) | 227 |
| BsrI | ACTGG | 4 cut(s) | 80, 156, 267, 592 |
| BssECI | CCNNGG | 1 cut(s) | 499 |
| BssMI | GATC | 2 cut(s) | 223, 337 |
| BssNI | GRCGYC | 2 cut(s) | 153, 444 |
| BssT1I | CCWWGG | 1 cut(s) | 499 |
| Bst4CI | ACNGT | 5 cut(s) | 359, 451, 467, 491, 557 |
| Bst6I | CTCTTC | 1 cut(s) | 42 |
| BstACI | GRCGYC | 2 cut(s) | 153, 444 |
| BstAFI | CTTAAG | 1 cut(s) | 227 |
| BstDEI | CTNAG | 1 cut(s) | 421 |
| BstF5I | GGATG | 2 cut(s) | 200, 246 |
| BstHHI | GCGC | 1 cut(s) | 163 |
| BstKTI | GATC | 2 cut(s) | 226, 340 |
| BstMBI | GATC | 2 cut(s) | 223, 337 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 65, 167 |
| BstNSI | RCATGY | 1 cut(s) | 375 |
| BstSFI | CTRYAG | 2 cut(s) | 463, 603 |
| BstV1I | GCAGC | 3 cut(s) | 156, 506, 615 |
| BsuRI | GGCC | 2 cut(s) | 79, 170 |
| BtsCI | GGATG | 2 cut(s) | 200, 246 |
| BtsIMutI | CAGTG | 5 cut(s) | 102, 163, 260, 447, 472 |
| BveI | ACCTGC | 1 cut(s) | 185 |
| CfoI | GCGC | 1 cut(s) | 163 |
| CseI | GACGC | 3 cut(s) | 161, 364, 433 |
| Csp6I | GTAC | 3 cut(s) | 268, 369, 528 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 306, 341 |
| CviAII | CATG | 3 cut(s) | 19, 372, 577 |
| CviJI | RGCY | 9 cut(s) | 5, 32, 79, 147, 170, 428, 497, 566, 602 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 32, 79, 147, 170, 428, 497, 566, 602 |
| CviQI | GTAC | 3 cut(s) | 268, 369, 528 |
| DdeI | CTNAG | 1 cut(s) | 421 |
| DpnI | GATC | 2 cut(s) | 225, 339 |
| DpnII | GATC | 2 cut(s) | 223, 337 |
| EaeI | YGGCCR | 1 cut(s) | 77 |
| Eam1104I | CTCTTC | 1 cut(s) | 42 |
| EarI | CTCTTC | 1 cut(s) | 42 |
| Eco130I | CCWWGG | 1 cut(s) | 499 |
| Eco57I | CTGAAG | 1 cut(s) | 231 |
| EcoT14I | CCWWGG | 1 cut(s) | 499 |
| ErhI | CCWWGG | 1 cut(s) | 499 |
| FaeI | CATG | 3 cut(s) | 22, 375, 580 |
| FaiI | YATR | 7 cut(s) | 20, 112, 167, 373, 397, 578, 626 |
| FaqI | GGGAC | 1 cut(s) | 299 |
| FatI | CATG | 3 cut(s) | 18, 371, 576 |
| Fnu4HI | GCNGC | 3 cut(s) | 145, 495, 629 |
| FokI | GGATG | 2 cut(s) | 207, 233 |
| Fsp4HI | GCNGC | 3 cut(s) | 145, 495, 629 |
| FspBI | CTAG | 1 cut(s) | 525 |
| GlaI | GCGC | 1 cut(s) | 162 |
| GluI | GCNGC | 3 cut(s) | 145, 495, 629 |
| GsuI | CTGGAG | 1 cut(s) | 284 |
| HaeIII | GGCC | 2 cut(s) | 79, 170 |
| HapII | CCGG | 1 cut(s) | 80 |
| HgaI | GACGC | 3 cut(s) | 161, 364, 433 |
| HhaI | GCGC | 1 cut(s) | 163 |
| Hin1I | GRCGYC | 2 cut(s) | 153, 444 |
| Hin1II | CATG | 3 cut(s) | 22, 375, 580 |
| Hin6I | GCGC | 1 cut(s) | 161 |
| HinP1I | GCGC | 1 cut(s) | 161 |
| HinfI | GANTC | 1 cut(s) | 504 |
| HpaII | CCGG | 1 cut(s) | 80 |
| HphI | GGTGA | 1 cut(s) | 393 |
| Hpy166II | GTNNAC | 2 cut(s) | 116, 355 |
| Hpy188III | TCNNGA | 2 cut(s) | 379, 536 |
| Hpy8I | GTNNAC | 2 cut(s) | 116, 355 |
| Hpy99I | CGWCG | 1 cut(s) | 155 |
| HpyAV | CCTTC | 3 cut(s) | 102, 206, 359 |
| HpyCH4III | ACNGT | 5 cut(s) | 359, 451, 467, 491, 557 |
| HpyCH4V | TGCA | 7 cut(s) | 144, 258, 345, 417, 474, 494, 515 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 65, 167 |
| HpyF3I | CTNAG | 1 cut(s) | 421 |
| Hsp92I | GRCGYC | 2 cut(s) | 153, 444 |
| Hsp92II | CATG | 3 cut(s) | 22, 375, 580 |
| HspAI | GCGC | 1 cut(s) | 161 |
| Kzo9I | GATC | 2 cut(s) | 223, 337 |
| Lsp1109I | GCAGC | 3 cut(s) | 156, 506, 615 |
| MaeI | CTAG | 1 cut(s) | 525 |
| MaeIII | GTNAC | 3 cut(s) | 185, 445, 557 |
| MalI | GATC | 2 cut(s) | 225, 339 |
| MboI | GATC | 2 cut(s) | 223, 337 |
| MboII | GAAGA | 2 cut(s) | 29, 428 |
| MluCI | AATT | 3 cut(s) | 139, 301, 587 |
| MnlI | CCTC | 2 cut(s) | 245, 541 |
| MseI | TTAA | 1 cut(s) | 228 |
| MslI | CAYNNNNRTG | 1 cut(s) | 406 |
| MspCI | CTTAAG | 1 cut(s) | 227 |
| MspI | CCGG | 1 cut(s) | 80 |
| Mva1269I | GAATGC | 1 cut(s) | 476 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 65, 167 |
| NdeII | GATC | 2 cut(s) | 223, 337 |
| NlaIII | CATG | 3 cut(s) | 22, 375, 580 |
| NmeAIII | GCCGAG | 1 cut(s) | 420 |
| NmuCI | GTSAC | 2 cut(s) | 185, 445 |
| NspI | RCATGY | 1 cut(s) | 375 |
| OliI | CACNNNNGTG | 1 cut(s) | 406 |
| PaqCI | CACCTGC | 1 cut(s) | 185 |
| PctI | GAATGC | 1 cut(s) | 476 |
| PfeI | GAWTC | 1 cut(s) | 504 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 598 |
| PkrI | GCNGC | 3 cut(s) | 146, 496, 630 |
| RsaI | GTAC | 3 cut(s) | 269, 370, 529 |
| RsaNI | GTAC | 3 cut(s) | 268, 369, 528 |
| RseI | CAYNNNNRTG | 1 cut(s) | 406 |
| SaqAI | TTAA | 1 cut(s) | 228 |
| SatI | GCNGC | 3 cut(s) | 145, 495, 629 |
| Sau3AI | GATC | 2 cut(s) | 223, 337 |
| SfcI | CTRYAG | 2 cut(s) | 463, 603 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 406 |
| SmlI | CTYRAG | 1 cut(s) | 227 |
| SmoI | CTYRAG | 1 cut(s) | 227 |
| SpeI | ACTAGT | 1 cut(s) | 524 |
| Sse9I | AATT | 3 cut(s) | 139, 301, 587 |
| SspMI | CTAG | 1 cut(s) | 525 |
| StyI | CCWWGG | 1 cut(s) | 499 |
| TaaI | ACNGT | 5 cut(s) | 359, 451, 467, 491, 557 |
| TaqI | TCGA | 3 cut(s) | 123, 150, 521 |
| TasI | AATT | 3 cut(s) | 139, 301, 587 |
| TatI | WGTACW | 1 cut(s) | 267 |
| TfiI | GAWTC | 1 cut(s) | 504 |
| Tru1I | TTAA | 1 cut(s) | 228 |
| Tru9I | TTAA | 1 cut(s) | 228 |
| TscAI | CASTG | 5 cut(s) | 109, 163, 267, 454, 472 |
| TseFI | GTSAC | 2 cut(s) | 185, 445 |
| TseI | GCWGC | 3 cut(s) | 144, 494, 628 |
| Tsp45I | GTSAC | 2 cut(s) | 185, 445 |
| TspDTI | ATGAA | 1 cut(s) | 565 |
| TspRI | CASTG | 5 cut(s) | 109, 163, 267, 454, 472 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 598 |
| Vha464I | CTTAAG | 1 cut(s) | 227 |
| XapI | RAATTY | 1 cut(s) | 587 |
| XceI | RCATGY | 1 cut(s) | 375 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 163 |
| XspI | CTAG | 1 cut(s) | 525 |