FvH4_6g10890

HEAT-like repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0003507
Physical Location & Seq
Forward (+)
6526825 .. 6530692
3868 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g10890.t3

Sequence Viewer

Length: 2607 bp
ATGGCCATGGAGATCACTCAGTGTCTATTATCAGCTCAATCAGCTGATGCAAGAGTTCGTAATGAAGCAGAATATAATCTGAGTCAATTTCACGAGCAAAACCTCCCTGCTTTCCTTCTGTCTTTGTCGGTTGAGCTAGCAAACGATGAAAAGCCAATTGAATCCCGAACGTTGGCTGGTATTGTTCTTAAGAACTTACTAGATGCCAAAGATCCTGCAACAAAGAAACATCTTGCTCAGAAATGGATGGCTATTGATATTGCATTCAAATCCCAAATCAAGAGCTGGCTCTTACAGACACTTGGGTCAGCTGTGCCAGAGGCAAGGCACACCTCTGCCCAAGTTGTTGCCAAAGTTGCTTCTATTGATGTACCCCAGAAACAGTGGCCTGAGCTAATTGGACATTTGCTTAATAACATGACTCAGCAAGATAGTACTGTTGGTTTGAAACAGTCAACTTTGAAAACTCTTGGTTATGTCTGCGAGGAAATATCGGTATCTGATCTTCAGCAAGACGAGGTAAACTTTGTGCTTACAGCTGTAATTCGAGGAATGGAACTTGCTGAAAACAGTTCTGAAGTCCGTCTTGCTGCAACAAGGACATTATTTAATGCCTTGGAGTTTGCTCAGAAAAACTTTGAAAATGAGAAGGATCAAACTTACATCATGAAGATAATCTGTCAGACCGCCTTGTCTAAAGAGGTCAATGTTAGGCAGGCTGCTTTTGAGTGCCTCACTTCAATTGCTTCTACTTACTATTCTGTGCTTGGGACTTACATGCAGGCTCTCTTTGAGCTTACATCAAATGCAATAAAAGGGGATGTAGAACCTGTTTCCCTCCAAGCAATTGAGTTTTGGAGCTCCATTTGTGAAAAAGAAATAGAGTTGCAAAAGTATAAGACAGTTGAGTGGAATCATTGGGACTCTTCACCGGAATTTGCGCCTCATTCACGTTTAATAGAAAACTCTCGGATTTCTATAGTACCACTATTGCTAGACACTTTGCTGATGCAGGAAGAAAATGTAAGCCAGGATGACAACTTCTGGAATATCTCAATGGCTGGTAAGAAATGCCTAGAACTTGTTTCCCAAACTGTTGGTGTTCTCATTCTACCCCTTGTGGTTCCATTTGTGGTGGCTAACAGACCGAAACCAGATTGGCATTGTCGGGAGGCAGCAGTTTCTGCACTTGGTGCAATTATTAAAGGCTCAACCGTTTCTCAGGATGCTGGGGACTTATTAAAATACAATGAGCTGGCCTTTCAACTTATAGATGACTTGGTTTTGTTAATGAATGATGAAAGCAGCGAAGTCAAAGAAACTACTGCATGGACTCTTAGTCTTATATTTGAATTTGTGCATAGCCCTGTTGGTGAAATTGCAGGGATCACTTCTGATAATCTTCCAGGAGTGGTAGATGTATTGGTAAAAAGCCTTAAGGATTCTCCAAATGTTGCAACTAAGGTGTGTCGGGCGATTTATACACTTGCTGAGGGCTACGAGGATGCTGAAATACACTCATCTTTTTTTCTGCCTTATATCCCTAGGTTCATTGAATGTCTTCTTTTTGCTGCTAGTCGTGCAGATGTGGATGATTCAGAATTGAGATCTGCTGCATATGAATCAGTAAAAGAGGTAGTGAGGTGTTCCAGCATTACACAATCATCGCAGATTATCAGAGAACTACTGCCAGTGATTATGCAGATGTTGAGTCAGACTTTAGAGCTTCAGATCGTGTCATTAGATGACAAGGTGAATCAAGCAGACCTGCAGGCTTCTCTTTGTGGTATCCTCCAGGTTATTATCGAGAAAGTTAGCAGTGCTGAAGATTTAGAAACTAGGTCCATTATATTGACACAGGCTGACCAGATAATGTTTTTGTTTCTTAATGTCCTTGCTTGCCGAAGTTCTACAGTGCATGAGGAAACAATGCTTGCTATTGGTGCCCTTGCTCATGCTACTGGCTCTGAGTTTGGCAAGTACCTTCCTGAATTATATAAGTACTTGGAGATGGGCTTAAAAAATTTCAAGGAGTATCAAGCCTGTTCTGTCACAGTTGGTGTACTTAGCGACATTGTTCATGTCTTGAATTACAAGGTAGTACCATACTGTGACCGGATTATGCATATTCTATTGATAAATCTTTCTAGTGAAGCACTTGACCGGTCTGTCAAGCCTCCAATATTATCTCTCATTGGCGACATAGCTCTCTCAGTAGGGGAATGTTTTCAGAATTATGTTTCTTCTGCAGTGCCAATGATGCAGAGAGCTGCAGAGCTATGTGCTCAGATGGATTCCAATGATGATGAGTTATTGGAGTATGCCAGGCAGCTCAAGTGTAGCATCTTTGAAGCTTATTCTGGTATACTTCGGGGCACCAAGAAGTCTAAGATCATGATGCCATATGCCCAATTTCTCTATGAGTTCATAGGATTTGTTCTGAAGGAGAAAGACAGGCATATCGTTTTTAGAAAAGCTTTAGCTGCTGTGATGGATGACCTTGCAGATTTGCTTGGTACAAACACAAAGACGCTATTTGGAGACCTTGCTGCTAGTGTTACATATGGTGGTGCGCGTCTTCGATCTAATGGTGATAACCTGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000060 GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000819 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0008092 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009987 GO:0010494 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019894 GO:0019899 GO:0019904 GO:0022402 GO:0022607 GO:0023052 GO:0030953 GO:0031072 GO:0031090 GO:0031122 GO:0031291 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0035556 GO:0035770 GO:0036464 GO:0040001 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0046907 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051225 GO:0051234 GO:0051276 GO:0051293 GO:0051303 GO:0051305 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051653 GO:0051656 GO:0051716 GO:0051879 GO:0065007 GO:0070013 GO:0070727 GO:0070925 GO:0071702 GO:0071705 GO:0071782 GO:0071840 GO:0072594 GO:0090307 GO:0097435 GO:0098813 GO:0098827 GO:0140014 GO:1902850 GO:1903047 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
HEAT HEAT_EZ IBN_N

Protein Analysis

869

Amino Acids

96.5

Weight (kDa)

4.92

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBN_N PF03810 23 - 103 4.9e-10 Importin-beta N-terminal domain
TPR_IPO5 PF25780 106 - 266 6e-08 IPO5-like, TPR repeats
HEAT_EZ PF13513 387 - 449 1.6e-07 HEAT-like repeat
TPR_IMB1 PF25574 471 - 819 1.4e-81 Importin subunit beta-1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 304, 691, 2168
Acc36I ACCTGC 1 cut(s) 1776
AccB1I GGYRCC 2 cut(s) 1943, 2375
AccI GTMKAC 1 cut(s) 2365
AccII CGCG 1 cut(s) 2575
AciI CCGC 1 cut(s) 687
AclI AACGTT 1 cut(s) 170
AclWI GGATC 3 cut(s) 206, 660, 1394
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 935, 1352, 2023
AcuI CTGAAG 5 cut(s) 491, 597, 1712, 1845, 2462
AdeI CACNNNGTG 2 cut(s) 21, 1193
AfaI GTAC 8 cut(s) 372, 436, 984, 1982, 2003, 2064, 2103, 2518
AfiI CCNNNNNNNGG 1 cut(s) 172
AflII CTTAAG 2 cut(s) 188, 1436
AgeI ACCGGT 1 cut(s) 2163
AhdI GACNNNNNGTC 1 cut(s) 1338
AjnI CCWGG 4 cut(s) 1029, 1405, 1794, 2324
Alw21I GWGCWC 2 cut(s) 863, 2287
Alw26I GTCTC 1 cut(s) 2535
AlwI GGATC 3 cut(s) 206, 660, 1394
AlwNI CAGNNNCTG 1 cut(s) 1184
AoxI GGCC 3 cut(s) 3, 386, 1257
ApoI RAATTY 3 cut(s) 935, 1352, 2023
AsiGI ACCGGT 1 cut(s) 2163
Asp700I GAANNNNTTC 2 cut(s) 1560, 2226
AspA2I CCTAGG 1 cut(s) 1544
AspLEI GCGC 2 cut(s) 943, 2575
AspS9I GGNCC 1 cut(s) 1842
AsuHPI GGTGA 4 cut(s) 921, 1385, 1765, 2603
AsuNHI GCTAGC 1 cut(s) 136
AvaII GGWCC 1 cut(s) 1842
AvrII CCTAGG 1 cut(s) 1544
BaeGI GKGCMC 2 cut(s) 1948, 2378
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 1943, 2375
BanII GRGCYC 1 cut(s) 863
BarI GAAGNNNNNNTAC 2 cut(s) 489, 521
BauI CACGAG 1 cut(s) 92
BbsI GAAGAC 2 cut(s) 1553, 2570
Bbv12I GWGCWC 2 cut(s) 863, 2287
BbvCI CCTCAGC 1 cut(s) 1491
BccI CCATC 4 cut(s) 241, 2005, 2284, 2485
BciT130I CCWGG 4 cut(s) 1031, 1407, 1796, 2326
BciVI GTATCC 1 cut(s) 1799
BcoDI GTCTC 1 cut(s) 2535
BfaI CTAG 9 cut(s) 137, 200, 995, 1076, 1545, 1575, 1839, 2148, 2553
BfmI CTRYAG 5 cut(s) 978, 1769, 1911, 2247, 2271
BfrI CTTAAG 2 cut(s) 188, 1436
BfuAI ACCTGC 1 cut(s) 1776
BfuI GTATCC 1 cut(s) 1799
BglII AGATCT 1 cut(s) 1607
BlnI CCTAGG 1 cut(s) 1544
BmcAI AGTACT 2 cut(s) 436, 2003
Bme1390I CCNGG 4 cut(s) 1031, 1407, 1796, 2326
Bme18I GGWCC 1 cut(s) 1842
BmeRI GACNNNNNGTC 1 cut(s) 1338
BmgT120I GGNCC 1 cut(s) 1842
BmiI GGNNCC 3 cut(s) 1125, 1945, 2377
BmrFI CCNGG 4 cut(s) 1031, 1407, 1796, 2326
BmsI GCATC 8 cut(s) 37, 193, 999, 1216, 1495, 2250, 2352, 2388
BmtI GCTAGC 1 cut(s) 140
BpiI GAAGAC 2 cut(s) 1553, 2570
BpmI CTGGAG 1 cut(s) 1778
Bpu10I CCTNAGC 2 cut(s) 390, 1491
BpuEI CTTGAG 1 cut(s) 2318
BsaI GGTCTC 1 cut(s) 2535
BsaJI CCNNGG 3 cut(s) 6, 615, 1544
BsaWI WCCGGW 3 cut(s) 931, 2115, 2163
Bsc4I CCNNNNNNNGG 1 cut(s) 172
Bse118I RCCGGY 1 cut(s) 2163
Bse1I ACTGG 2 cut(s) 1691, 1966
BseBI CCWGG 4 cut(s) 1031, 1407, 1796, 2326
BseDI CCNNGG 3 cut(s) 6, 615, 1544
BseGI GGATG 7 cut(s) 252, 826, 1039, 1231, 1510, 1597, 2500
BseLI CCNNNNNNNGG 1 cut(s) 172
BseNI ACTGG 2 cut(s) 1691, 1966
BseSI GKGCMC 2 cut(s) 1948, 2378
BseYI CCCAGC 1 cut(s) 1229
BsgI GTGCAG 2 cut(s) 1170, 1602
Bsh1236I CGCG 1 cut(s) 2575
BshFI GGCC 3 cut(s) 5, 388, 1259
BshNI GGYRCC 2 cut(s) 1943, 2375
BshTI ACCGGT 1 cut(s) 2163
BsiHKAI GWGCWC 2 cut(s) 863, 2287
BsiSI CCGG 3 cut(s) 932, 2116, 2164
BslFI GGGAC 3 cut(s) 784, 935, 1247
BslI CCNNNNNNNGG 1 cut(s) 172
BsmAI GTCTC 1 cut(s) 2535
BsmFI GGGAC 3 cut(s) 784, 935, 1247
BsmI GAATGC 1 cut(s) 263
BsnI GGCC 3 cut(s) 5, 388, 1259
Bso31I GGTCTC 1 cut(s) 2535
Bsp1286I GDGCHC 4 cut(s) 863, 1948, 2287, 2378
Bsp143I GATC 9 cut(s) 12, 211, 502, 652, 1386, 1607, 1731, 2391, 2582
Bsp19I CCATGG 1 cut(s) 6
BspACI CCGC 1 cut(s) 687
BspANI GGCC 3 cut(s) 5, 388, 1259
BspFNI CGCG 1 cut(s) 2575
BspHI TCATGA 2 cut(s) 666, 2394
BspLI GGNNCC 3 cut(s) 1125, 1945, 2377
BspMAI CTGCAG 3 cut(s) 1773, 2251, 2275
BspMI ACCTGC 1 cut(s) 1776
BspOI GCTAGC 1 cut(s) 140
BspPI GGATC 3 cut(s) 206, 660, 1394
BspT107I GGYRCC 2 cut(s) 1943, 2375
BspTI CTTAAG 2 cut(s) 188, 1436
BspTNI GGTCTC 1 cut(s) 2535
BsrFI RCCGGY 1 cut(s) 2163
BsrI ACTGG 2 cut(s) 1691, 1966
BssAI RCCGGY 1 cut(s) 2163
BssECI CCNNGG 3 cut(s) 6, 615, 1544
BssMI GATC 9 cut(s) 12, 211, 502, 652, 1386, 1607, 1731, 2391, 2582
BssNAI GTATAC 1 cut(s) 2366
BssSI CACGAG 1 cut(s) 92
BssT1I CCWWGG 3 cut(s) 6, 615, 1544
Bst1107I GTATAC 1 cut(s) 2366
Bst2BI CACGAG 1 cut(s) 92
Bst2UI CCWGG 4 cut(s) 1031, 1407, 1796, 2326
Bst6I CTCTTC 1 cut(s) 931
BstAFI CTTAAG 2 cut(s) 188, 1436
BstAPI GCANNNNNTGC 2 cut(s) 1184, 1193
BstC8I GCNNGC 8 cut(s) 138, 287, 717, 783, 1257, 1773, 1900, 1935
BstDSI CCRYGG 1 cut(s) 6
BstF5I GGATG 7 cut(s) 252, 826, 1039, 1231, 1510, 1597, 2500
BstFNI CGCG 1 cut(s) 2575
BstHHI GCGC 2 cut(s) 943, 2575
BstKTI GATC 9 cut(s) 15, 214, 505, 655, 1389, 1610, 1734, 2394, 2585
BstMAI GTCTC 1 cut(s) 2535
BstMBI GATC 9 cut(s) 12, 211, 502, 652, 1386, 1607, 1731, 2391, 2582
BstMWI GCNNNNNNNGC 8 cut(s) 41, 356, 1184, 1193, 1580, 1943, 2260, 2483
BstNI CCWGG 4 cut(s) 1031, 1407, 1796, 2326
BstNSI RCATGY 1 cut(s) 781
BstSCI CCNGG 4 cut(s) 1029, 1405, 1794, 2324
BstSFI CTRYAG 5 cut(s) 978, 1769, 1911, 2247, 2271
BstSLI GKGCMC 2 cut(s) 1948, 2378
BstUI CGCG 1 cut(s) 2575
BstV2I GAAGAC 2 cut(s) 1553, 2570
BstX2I RGATCY 2 cut(s) 211, 1607
BstXI CCANNNNNNTGG 1 cut(s) 1097
BstYI RGATCY 2 cut(s) 211, 1607
BstZ17I GTATAC 1 cut(s) 2366
BsuI GTATCC 1 cut(s) 1799
BsuRI GGCC 3 cut(s) 5, 388, 1259
BtgI CCRYGG 1 cut(s) 6
BtgZI GCGATG 1 cut(s) 1650
BtsCI GGATG 7 cut(s) 252, 826, 1039, 1231, 1510, 1597, 2500
BtsI GCAGTG 2 cut(s) 1825, 2256
BtsIMutI CAGTG 6 cut(s) 26, 389, 1698, 1825, 1920, 2256
BveI ACCTGC 1 cut(s) 1776
Cac8I GCNNGC 8 cut(s) 138, 287, 717, 783, 1257, 1773, 1900, 1935
CaiI CAGNNNCTG 1 cut(s) 1184
CciI TCATGA 2 cut(s) 666, 2394
CfoI GCGC 2 cut(s) 943, 2575
Cfr10I RCCGGY 1 cut(s) 2163
Cfr13I GGNCC 1 cut(s) 1842
CseI GACGC 2 cut(s) 2539, 2564
Csp6I GTAC 8 cut(s) 371, 435, 983, 1981, 2002, 2063, 2102, 2517
CspAI ACCGGT 1 cut(s) 2163
CviAII CATG 9 cut(s) 7, 418, 667, 778, 1329, 1919, 1955, 2081, 2395
CviQI GTAC 8 cut(s) 371, 435, 983, 1981, 2002, 2063, 2102, 2517
DpnI GATC 9 cut(s) 14, 213, 504, 654, 1388, 1609, 1733, 2393, 2584
DpnII GATC 9 cut(s) 12, 211, 502, 652, 1386, 1607, 1731, 2391, 2582
DraIII CACNNNGTG 2 cut(s) 21, 1193
DrdI GACNNNNNNGTC 3 cut(s) 304, 691, 2168
DriI GACNNNNNGTC 1 cut(s) 1338
DseDI GACNNNNNNGTC 3 cut(s) 304, 691, 2168
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 931
Eam1105I GACNNNNNGTC 1 cut(s) 1338
EarI CTCTTC 1 cut(s) 931
Ecl136II GAGCTC 1 cut(s) 861
Eco130I CCWWGG 3 cut(s) 6, 615, 1544
Eco24I GRGCYC 1 cut(s) 863
Eco31I GGTCTC 1 cut(s) 2535
Eco47I GGWCC 1 cut(s) 1842
Eco53kI GAGCTC 1 cut(s) 861
Eco57I CTGAAG 5 cut(s) 491, 597, 1712, 1845, 2462
EcoICRI GAGCTC 1 cut(s) 861
EcoRII CCWGG 4 cut(s) 1029, 1405, 1794, 2324
EcoT14I CCWWGG 3 cut(s) 6, 615, 1544
EcoT22I ATGCAT 1 cut(s) 2127
EcoT38I GRGCYC 1 cut(s) 863
ErhI CCWWGG 3 cut(s) 6, 615, 1544
FaeI CATG 9 cut(s) 10, 421, 670, 781, 1332, 1922, 1958, 2084, 2398
FalI AAGNNNNNCTT 2 cut(s) 570, 602
FaqI GGGAC 3 cut(s) 784, 935, 1247
FatI CATG 9 cut(s) 6, 417, 666, 777, 1328, 1918, 1954, 2080, 2394
FauNDI CATATG 3 cut(s) 1618, 2404, 2563
FblI GTMKAC 1 cut(s) 2365
FokI GGATG 7 cut(s) 259, 833, 1046, 1238, 1517, 1604, 2507
FriOI GRGCYC 1 cut(s) 863
FspBI CTAG 9 cut(s) 137, 200, 995, 1076, 1545, 1575, 1839, 2148, 2553
GlaI GCGC 2 cut(s) 942, 2574
GsaI CCCAGC 1 cut(s) 1233
GsuI CTGGAG 1 cut(s) 1778
HaeIII GGCC 3 cut(s) 5, 388, 1259
HapII CCGG 3 cut(s) 932, 2116, 2164
HgaI GACGC 2 cut(s) 2539, 2564
HhaI GCGC 2 cut(s) 943, 2575
Hin1II CATG 9 cut(s) 10, 421, 670, 781, 1332, 1922, 1958, 2084, 2398
Hin6I GCGC 2 cut(s) 941, 2573
HinP1I GCGC 2 cut(s) 941, 2573
HincII GTYRAC 1 cut(s) 456
HindII GTYRAC 1 cut(s) 456
HindIII AAGCTT 2 cut(s) 2352, 2475
HpaII CCGG 3 cut(s) 932, 2116, 2164
HphI GGTGA 4 cut(s) 921, 1385, 1765, 2603
Hpy166II GTNNAC 4 cut(s) 456, 523, 2063, 2366
Hpy8I GTNNAC 4 cut(s) 456, 523, 2063, 2366
HpyAV CCTTC 4 cut(s) 125, 643, 1994, 2437
HpyCH4IV ACGT 2 cut(s) 170, 952
HpyF10VI GCNNNNNNNGC 8 cut(s) 41, 356, 1184, 1193, 1580, 1943, 2260, 2483
HpySE526I ACGT 2 cut(s) 170, 952
Hsp92II CATG 9 cut(s) 10, 421, 670, 781, 1332, 1922, 1958, 2084, 2398
HspAI GCGC 2 cut(s) 941, 2573
Kzo9I GATC 9 cut(s) 12, 211, 502, 652, 1386, 1607, 1731, 2391, 2582
LmnI GCTCC 2 cut(s) 858, 866
LweI GCATC 8 cut(s) 37, 193, 999, 1216, 1495, 2250, 2352, 2388
MaeI CTAG 9 cut(s) 137, 200, 995, 1076, 1545, 1575, 1839, 2148, 2553
MaeII ACGT 2 cut(s) 170, 952
MaeIII GTNAC 3 cut(s) 2050, 2111, 2557
MalI GATC 9 cut(s) 14, 213, 504, 654, 1388, 1609, 1733, 2393, 2584
MboI GATC 9 cut(s) 12, 211, 502, 652, 1386, 1607, 1731, 2391, 2582
MboII GAAGA 9 cut(s) 497, 682, 918, 1028, 1394, 1553, 1838, 2235, 2570
MfeI CAATTG 3 cut(s) 156, 741, 846
MflI RGATCY 2 cut(s) 211, 1607
MhlI GDGCHC 4 cut(s) 863, 1948, 2287, 2378
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 5 cut(s) 91, 415, 917, 1327, 1720
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 2127
MroXI GAANNNNTTC 2 cut(s) 1560, 2226
MscI TGGCCA 1 cut(s) 5
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 44, 311, 539
MspCI CTTAAG 2 cut(s) 188, 1436
MspI CCGG 3 cut(s) 932, 2116, 2164
MspR9I CCNGG 4 cut(s) 1031, 1407, 1796, 2326
MunI CAATTG 3 cut(s) 156, 741, 846
Mva1269I GAATGC 1 cut(s) 263
MvaI CCWGG 4 cut(s) 1031, 1407, 1796, 2326
MvnI CGCG 1 cut(s) 2575
MwoI GCNNNNNNNGC 8 cut(s) 41, 356, 1184, 1193, 1580, 1943, 2260, 2483
NcoI CCATGG 1 cut(s) 6
NdeI CATATG 3 cut(s) 1618, 2404, 2563
NdeII GATC 9 cut(s) 12, 211, 502, 652, 1386, 1607, 1731, 2391, 2582
NheI GCTAGC 1 cut(s) 136
NlaIII CATG 9 cut(s) 10, 421, 670, 781, 1332, 1922, 1958, 2084, 2398
NlaIV GGNNCC 3 cut(s) 1125, 1945, 2377
NmuCI GTSAC 2 cut(s) 2050, 2111
NsiI ATGCAT 1 cut(s) 2127
NspI RCATGY 1 cut(s) 781
PagI TCATGA 2 cut(s) 666, 2394
PctI GAATGC 1 cut(s) 263
PdmI GAANNNNTTC 2 cut(s) 1560, 2226
PfeI GAWTC 7 cut(s) 161, 913, 1442, 1595, 1622, 1756, 2294
PfoI TCCNGGA 1 cut(s) 1405
PinAI ACCGGT 1 cut(s) 2163
PleI GAGTC 5 cut(s) 90, 415, 917, 1327, 1719
PpsI GAGTC 5 cut(s) 90, 415, 917, 1327, 1719
Psp124BI GAGCTC 1 cut(s) 863
Psp1406I AACGTT 1 cut(s) 170
Psp6I CCWGG 4 cut(s) 1029, 1405, 1794, 2324
PspFI CCCAGC 1 cut(s) 1229
PspGI CCWGG 4 cut(s) 1029, 1405, 1794, 2324
PspN4I GGNNCC 3 cut(s) 1125, 1945, 2377
PspPI GGNCC 1 cut(s) 1842
PstI CTGCAG 3 cut(s) 1773, 2251, 2275
PstNI CAGNNNCTG 1 cut(s) 1184
PsuI RGATCY 2 cut(s) 211, 1607
PvuII CAGCTG 3 cut(s) 44, 311, 539
RsaI GTAC 8 cut(s) 372, 436, 984, 1982, 2003, 2064, 2103, 2518
RsaNI GTAC 8 cut(s) 371, 435, 983, 1981, 2002, 2063, 2102, 2517
SacI GAGCTC 1 cut(s) 863
Sau3AI GATC 9 cut(s) 12, 211, 502, 652, 1386, 1607, 1731, 2391, 2582
Sau96I GGNCC 1 cut(s) 1842
SbfI CCTGCAGG 1 cut(s) 1773
ScaI AGTACT 2 cut(s) 436, 2003
SchI GAGTC 5 cut(s) 91, 415, 917, 1327, 1720
ScrFI CCNGG 4 cut(s) 1031, 1407, 1796, 2326
SdaI CCTGCAGG 1 cut(s) 1773
SduI GDGCHC 4 cut(s) 863, 1948, 2287, 2378
SfaNI GCATC 8 cut(s) 37, 193, 999, 1216, 1495, 2250, 2352, 2388
SfcI CTRYAG 5 cut(s) 978, 1769, 1911, 2247, 2271
SinI GGWCC 1 cut(s) 1842
SmlI CTYRAG 3 cut(s) 188, 1436, 2333
SmoI CTYRAG 3 cut(s) 188, 1436, 2333
Sse8387I CCTGCAGG 1 cut(s) 1773
SsiI CCGC 1 cut(s) 687
SspI AATATT 1 cut(s) 2184
SspMI CTAG 9 cut(s) 137, 200, 995, 1076, 1545, 1575, 1839, 2148, 2553
SstI GAGCTC 1 cut(s) 863
StyD4I CCNGG 4 cut(s) 1029, 1405, 1794, 2324
StyI CCWWGG 3 cut(s) 6, 615, 1544
TaiI ACGT 2 cut(s) 173, 955
TaqI TCGA 3 cut(s) 547, 1806, 2581
TaqII GACCGA 1 cut(s) 1162
TatI WGTACW 3 cut(s) 434, 2001, 2062
TfiI GAWTC 7 cut(s) 161, 913, 1442, 1595, 1622, 1756, 2294
TscAI CASTG 6 cut(s) 26, 389, 1698, 1825, 1920, 2256
TseFI GTSAC 2 cut(s) 2050, 2111
Tsp45I GTSAC 2 cut(s) 2050, 2111
TspDTI ATGAA 9 cut(s) 78, 162, 683, 1307, 1314, 1540, 1635, 2069, 2416
TspGWI ACGGA 1 cut(s) 572
TspRI CASTG 6 cut(s) 26, 389, 1698, 1825, 1920, 2256
Vha464I CTTAAG 2 cut(s) 188, 1436
VpaK11BI GGWCC 1 cut(s) 1842
XapI RAATTY 3 cut(s) 935, 1352, 2023
XceI RCATGY 1 cut(s) 781
XmaJI CCTAGG 1 cut(s) 1544
XmiI GTMKAC 1 cut(s) 2365
XmnI GAANNNNTTC 2 cut(s) 1560, 2226
XspI CTAG 9 cut(s) 137, 200, 995, 1076, 1545, 1575, 1839, 2148, 2553
ZrmI AGTACT 2 cut(s) 436, 2003
Zsp2I ATGCAT 1 cut(s) 2127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.