Rh3BG116200

HEAT-like repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0003507
Physical Location & Seq
Forward (+)
9583267 .. 9586995
3729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG116200.1

Sequence Viewer

Length: 2559 bp
ATGTCCCTTTTGGTGATTTCCTTTGTGGCATTGTGGAAAGAAATGGCCATGGAGATCACTCGGTATCTATTGTCAGCTCAATCAGCCGATGCAAGAGTTCGTACTGAAGCAGAATCTAATCTGAGGAAATTTCAAGAGCAAAACCTACCTGCTTTCCTTCTGTTGTTGTCGGTTGAGCTAGCAAACAATGAAAAGCCAGTTGAATCCCGAAGGTTGGCTGGTATTGTTCTTAAGAACTTACTAGATGCCAAAGATTCTATTACGAAGAAACATCTTGCTCAGCAATGGATGGATATTGATATTGCATTTAAATCCCAAATCAAGAGCTGGCTCTTACAGACACTTGGGTCATCTGTGGCAGAGGCAAGGCACACCTCTGCCCAAGTTCTTGCCAAAGTTGCTTCTATTGATGTTCCCCGGAAACAGTGGCCTGAGCTAATTGGACATTTGCTTAATAACATGATTCAGCGCGATAGCTCTGCCGGTTTGAAACAGTCAACCTTGGAAACTCTTGGTTATGTATGTGAGGAAATATCCCATCCTGATCTTCAGCAAGACAAGGTAAACTCTGTTCTTACAGCTGTAATTCAAGGAATGAATCTTGAGAACAGTTCTGAAGTCCGTCTTGCTGCAACAAGGGCATTATGTAATGCCTTGGAGTTTGCTCAGACAAACTTTGAAAATGAGATGGAACGAACTTACATCATGAAGATGATCTGTGAGACTGCCTTATCTAAGGAGGTAGAGGTTAGGCAGGCTGCTTTTCAGTGCCTTGCCTCAATTGCTTCTACATACTATTCTGTGCTTGGGACTTACATGCAGGCTCTCTTTGAGCTTACATCAAATGCGGTAAAAGGGGATGTAGAACCTGTTGCCCTTCAAGCAATTGAGTTCTGGAGTTCCATTTGTGAAAAAGAAATAGAATTGCAAAAGTATGAGACAGCTGACAGGAACTGTTGGGACTCTTTACCGGACTTTGTGCCTCCTCATTCACGTTTTATAGAAAAATCTAGAATTTCTCTAATTCCAATTTTGCTAGAGACTTTGCTGATGCAGGAAGAAAATGTAAGCCAGGATGACAACATTTGGAATATCTCAATGGCTGGGAAGAAATGCCTAGAACTTGTTGCCCAAACTGTTGGGTTTGTCATTGTACCGCTTGTGATTCCATTTGTGGTGGCTAACAGAGTGAAACCAGATTGGCATTGTCGGGAGGCAGCAGTTTTTGCACTTGGTGCAATTATTGAAGGCTCAACCATCTATCAGGATCTTGGGGTCTTATTAAAATACTGTGAACTGGTCCGTGAACTTATAGATGACTTGCTTTTCTTAATGAATGATGAAAACAACCAAGTCAAAGAAACTACTGCATGGACTCTCGGTCGTATATTTGAATTTTTGCATAGTCCTGTTGGTGGATTTTCTGTGATTACTTCCGATAATCTTCCAATAGTGGTAGATATATTGGTGAAGAGCGTTAGTGATGCTCCAAATGTTGCAACTAAGGTGTGTCGGGCGATTTATACACTTGCTGAGGGCTATGAGGAAGCTGGAATGCATTCATCTTTTTTTATGCCATATATCCCTAGGATCATTGAAAGTCTTCTTTTTGCTGCTAGTCGTGCAGATGTGGATGATTCGAAATTGAGGTCTGCTGCATATGAATCATTAAACGAGGTAGTGAGGTGTTCCAGCAGTACCGAAACACCACAGATTATAAGAGAACTACTCTCTGTGATTTTGGAGAGGTTGGGTCAGACTTTAGAGCTTCAGATTGTATCATCAGATGGCAAGGAAAAGCAAGCAGACTTGCAGGCTTCTCTTTGTGGAGTTCTCCAGGTTATAATCGAGAAAGTTAGCAGTGCCGATGATTTAGAAACCAGGTCCATTATGTTGACACAGGCAGACCAGATAATGTTTTTGTTTCTTAATGTCTTTTCTTGCCGAAGTTCTACAGTGCATGAGGAAGCCATGCTTGCTATTGGTGCCCTTGCTCATGCTACTGGGTCTGAGTTTGGCAAGTACCTTCCTGAATTATACAAGTACTTGAAGAGGGGGTTGCAAAATTTCAAGGACTATCAAGCCTGTTCTGTCACAGTTTGTGTGGTTGGCGACATTGCTCGTGCCTTGAAGTACAAGGTAGTACCATATTGTGATGGGATTATGCAAATTCTGTTGACGAATCTTTCTAGTGAAGCACTCGACCGGTCTGTCAAGCCTCCCATATTCTCTGTCATTGGCGACATAGCTCTCTCAATAGATGAAAACTTTCAGAAGTATGTTGACTCTGCAGTGCCAATGATGCAGAGAGCTGCGGAGCTGTGTGCTCAGATGGACTCCAATGATGATGAGTTATTGGAGTACGGCAGTCAGCTCAAGTGTAGCATCTTTGAAGCTTATTCTGGTATACTTCGGGGCACCAAGAAGTCTAAGATCATGATGCCATATGCCCAGCTTCTCTACGAGTTTATAGGATTTGTTTTGAAGGAGAAAGACAGGTATCATGTTCCGATTGGATGGTGTGGCATGCATGTTGTTGATAATTTTTTTTTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000060 GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000819 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0008092 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009987 GO:0010494 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019894 GO:0019899 GO:0019904 GO:0022402 GO:0022607 GO:0023052 GO:0030953 GO:0031072 GO:0031090 GO:0031122 GO:0031291 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0035556 GO:0035770 GO:0036464 GO:0040001 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0046907 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051225 GO:0051234 GO:0051276 GO:0051293 GO:0051303 GO:0051305 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051653 GO:0051656 GO:0051716 GO:0051879 GO:0065007 GO:0070013 GO:0070727 GO:0070925 GO:0071702 GO:0071705 GO:0071782 GO:0071840 GO:0072594 GO:0090307 GO:0097435 GO:0098813 GO:0098827 GO:0140014 GO:1902850 GO:1903047 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
HEAT HEAT_EZ IBN_N

Protein Analysis

852

Amino Acids

95.41

Weight (kDa)

4.99

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBN_N PF03810 37 - 117 9.2e-09 Importin-beta N-terminal domain
TPR_IPO5 PF25780 120 - 279 1.3e-09 IPO5-like, TPR repeats
HEAT_EZ PF13513 401 - 463 1.8e-06 HEAT-like repeat
TPR_IMB1 PF25574 485 - 833 1.5e-85 Importin subunit beta-1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1718, 1844
AasI GACNNNNNNGTC 2 cut(s) 346, 2210
Acc36I ACCTGC 1 cut(s) 157
AccB1I GGYRCC 2 cut(s) 1985, 2417
AccI GTMKAC 1 cut(s) 2407
AccII CGCG 1 cut(s) 471
AciI CCGC 3 cut(s) 848, 1157, 2315
AclWI GGATC 2 cut(s) 1275, 1598
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 5 cut(s) 128, 1014, 1394, 2065, 2169
AcuI CTGAAG 4 cut(s) 126, 533, 636, 1754
AdeI CACNNNGTG 1 cut(s) 1235
AfaI GTAC 8 cut(s) 103, 1155, 1699, 2024, 2045, 2135, 2145, 2363
AfiI CCNNNNNNNGG 2 cut(s) 214, 1415
AflII CTTAAG 1 cut(s) 230
AgeI ACCGGT 1 cut(s) 2205
AhdI GACNNNNNGTC 1 cut(s) 1380
AjnI CCWGG 3 cut(s) 1071, 1836, 1880
Alw21I GWGCWC 1 cut(s) 2329
Alw26I GTCTC 3 cut(s) 716, 932, 1034
AlwI GGATC 2 cut(s) 1275, 1598
AlwNI CAGNNNCTG 1 cut(s) 954
AoxI GGCC 2 cut(s) 45, 428
ApeKI GCWGC 6 cut(s) 629, 758, 1217, 1613, 1655, 2312
ApoI RAATTY 5 cut(s) 128, 1014, 1394, 2065, 2169
ArsI GACNNNNNNTTYG 2 cut(s) 1634, 1666
AsiGI ACCGGT 1 cut(s) 2205
Asp700I GAANNNNTTC 3 cut(s) 1558, 1602, 2268
AspA2I CCTAGG 1 cut(s) 1586
AspLEI GCGC 1 cut(s) 471
AspS9I GGNCC 2 cut(s) 1300, 1884
AsuC2I CCSGG 1 cut(s) 418
AsuHPI GGTGA 2 cut(s) 25, 1480
AsuII TTCGAA 1 cut(s) 1640
AsuNHI GCTAGC 1 cut(s) 178
AvaII GGWCC 2 cut(s) 1300, 1884
AvrII CCTAGG 1 cut(s) 1586
BaeGI GKGCMC 2 cut(s) 1990, 2420
BalI TGGCCA 1 cut(s) 47
BanI GGYRCC 2 cut(s) 1985, 2417
BauI CACGAG 1 cut(s) 2121
BbsI GAAGAC 1 cut(s) 1595
Bbv12I GWGCWC 1 cut(s) 2329
BbvCI CCTCAGC 1 cut(s) 1533
BbvI GCAGC 6 cut(s) 616, 745, 1229, 1600, 1642, 2299
BccI CCATC 8 cut(s) 283, 546, 682, 1265, 1781, 2150, 2326, 2511
BceAI ACGGC 1 cut(s) 2380
BcgI CGANNNNNNTGC 2 cut(s) 461, 495
BciT130I CCWGG 3 cut(s) 1073, 1838, 1882
BcnI CCSGG 1 cut(s) 418
BcoDI GTCTC 3 cut(s) 716, 932, 1034
BfaI CTAG 8 cut(s) 179, 242, 1011, 1037, 1118, 1587, 1617, 2190
BfmI CTRYAG 2 cut(s) 1953, 2289
BfrI CTTAAG 1 cut(s) 230
BfuAI ACCTGC 1 cut(s) 157
BisI GCNGC 6 cut(s) 630, 759, 1218, 1614, 1656, 2313
BlnI CCTAGG 1 cut(s) 1586
BlpI GCTNAGC 1 cut(s) 279
BlsI GCNGC 6 cut(s) 631, 760, 1219, 1615, 1657, 2314
BmcAI AGTACT 1 cut(s) 2045
Bme1390I CCNGG 4 cut(s) 418, 1073, 1838, 1882
Bme18I GGWCC 2 cut(s) 1300, 1884
BmeRI GACNNNNNGTC 1 cut(s) 1380
BmgT120I GGNCC 2 cut(s) 1300, 1884
BmiI GGNNCC 2 cut(s) 1987, 2419
BmrFI CCNGG 4 cut(s) 418, 1073, 1838, 1882
BmrI ACTGGG 1 cut(s) 2013
BmsI GCATC 7 cut(s) 79, 235, 1041, 1474, 2292, 2394, 2430
BmtI GCTAGC 1 cut(s) 182
BmuI ACTGGG 1 cut(s) 2013
BpiI GAAGAC 1 cut(s) 1595
BplI GAGNNNNNCTC 2 cut(s) 1713, 1745
BpmI CTGGAG 2 cut(s) 916, 1820
Bpu10I CCTNAGC 2 cut(s) 432, 1533
Bpu1102I GCTNAGC 1 cut(s) 279
Bpu14I TTCGAA 1 cut(s) 1640
BpuEI CTTGAG 2 cut(s) 623, 2360
BpuMI CCSGG 1 cut(s) 418
BsaJI CCNNGG 5 cut(s) 48, 416, 501, 654, 1586
BsaWI WCCGGW 2 cut(s) 970, 2205
Bsc4I CCNNNNNNNGG 2 cut(s) 214, 1415
Bse118I RCCGGY 2 cut(s) 482, 2205
Bse1I ACTGG 3 cut(s) 197, 1302, 2008
Bse3DI GCAATG 2 cut(s) 290, 2115
BseBI CCWGG 3 cut(s) 1073, 1838, 1882
BseDI CCNNGG 5 cut(s) 48, 416, 501, 654, 1586
BseGI GGATG 6 cut(s) 294, 538, 865, 1081, 1639, 2522
BseLI CCNNNNNNNGG 2 cut(s) 214, 1415
BseMI GCAATG 2 cut(s) 290, 2115
BseMII CTCAG 7 cut(s) 113, 293, 423, 680, 1524, 2001, 2342
BseNI ACTGG 3 cut(s) 197, 1302, 2008
BseRI GAGGAG 1 cut(s) 975
BseSI GKGCMC 2 cut(s) 1990, 2420
BseXI GCAGC 6 cut(s) 616, 745, 1229, 1600, 1642, 2299
BseYI CCCAGC 2 cut(s) 1103, 2451
BsgI GTGCAG 1 cut(s) 1644
Bsh1236I CGCG 1 cut(s) 471
Bsh1285I CGRYCG 2 cut(s) 1384, 2206
BshFI GGCC 2 cut(s) 47, 430
BshNI GGYRCC 2 cut(s) 1985, 2417
BshTI ACCGGT 1 cut(s) 2205
BsiEI CGRYCG 2 cut(s) 1384, 2206
BsiHKAI GWGCWC 1 cut(s) 2329
BsiSI CCGG 4 cut(s) 418, 483, 971, 2206
BslFI GGGAC 2 cut(s) 823, 974
BslI CCNNNNNNNGG 2 cut(s) 214, 1415
BsmAI GTCTC 3 cut(s) 716, 932, 1034
BsmFI GGGAC 2 cut(s) 823, 974
BsmI GAATGC 2 cut(s) 1558, 1560
BsnI GGCC 2 cut(s) 47, 430
Bsp119I TTCGAA 1 cut(s) 1640
Bsp1286I GDGCHC 3 cut(s) 1990, 2329, 2420
Bsp143I GATC 6 cut(s) 54, 544, 714, 1267, 1590, 2433
Bsp1720I GCTNAGC 1 cut(s) 279
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 3 cut(s) 848, 1157, 2315
BspANI GGCC 2 cut(s) 47, 430
BspCNI CTCAG 7 cut(s) 114, 292, 424, 679, 1525, 2002, 2341
BspFNI CGCG 1 cut(s) 471
BspHI TCATGA 2 cut(s) 705, 2436
BspLI GGNNCC 2 cut(s) 1987, 2419
BspMAI CTGCAG 1 cut(s) 2293
BspMI ACCTGC 1 cut(s) 157
BspOI GCTAGC 1 cut(s) 182
BspPI GGATC 2 cut(s) 1275, 1598
BspQI GCTCTTC 1 cut(s) 1466
BspT104I TTCGAA 1 cut(s) 1640
BspT107I GGYRCC 2 cut(s) 1985, 2417
BspTI CTTAAG 1 cut(s) 230
BsrDI GCAATG 2 cut(s) 290, 2115
BsrFI RCCGGY 2 cut(s) 482, 2205
BsrI ACTGG 3 cut(s) 197, 1302, 2008
BssAI RCCGGY 2 cut(s) 482, 2205
BssECI CCNNGG 5 cut(s) 48, 416, 501, 654, 1586
BssMI GATC 6 cut(s) 54, 544, 714, 1267, 1590, 2433
BssNAI GTATAC 1 cut(s) 2408
BssSI CACGAG 1 cut(s) 2121
BssT1I CCWWGG 4 cut(s) 48, 501, 654, 1586
Bst1107I GTATAC 1 cut(s) 2408
Bst2BI CACGAG 1 cut(s) 2121
Bst2UI CCWGG 3 cut(s) 1073, 1838, 1882
Bst4CI ACNGT 8 cut(s) 426, 495, 611, 956, 1138, 1292, 1957, 2098
Bst6I CTCTTC 2 cut(s) 1466, 2045
BstAFI CTTAAG 1 cut(s) 230
BstAPI GCANNNNNTGC 2 cut(s) 1226, 1235
BstBI TTCGAA 1 cut(s) 1640
BstC8I GCNNGC 8 cut(s) 180, 329, 756, 822, 1803, 1815, 1977, 2528
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 6 cut(s) 294, 538, 865, 1081, 1639, 2522
BstFNI CGCG 1 cut(s) 471
BstHHI GCGC 1 cut(s) 471
BstKTI GATC 6 cut(s) 57, 547, 717, 1270, 1593, 2436
BstMAI GTCTC 3 cut(s) 716, 932, 1034
BstMBI GATC 6 cut(s) 54, 544, 714, 1267, 1590, 2433
BstMCI CGRYCG 2 cut(s) 1384, 2206
BstNI CCWGG 3 cut(s) 1073, 1838, 1882
BstNSI RCATGY 3 cut(s) 820, 2530, 2534
BstSCI CCNGG 4 cut(s) 416, 1071, 1836, 1880
BstSFI CTRYAG 2 cut(s) 1953, 2289
BstSLI GKGCMC 2 cut(s) 1990, 2420
BstUI CGCG 1 cut(s) 471
BstV1I GCAGC 6 cut(s) 616, 745, 1229, 1600, 1642, 2299
BstV2I GAAGAC 1 cut(s) 1595
BstX2I RGATCY 1 cut(s) 1267
BstXI CCANNNNNNTGG 1 cut(s) 1139
BstYI RGATCY 1 cut(s) 1267
BstZ17I GTATAC 1 cut(s) 2408
BsuRI GGCC 2 cut(s) 47, 430
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 6 cut(s) 294, 538, 865, 1081, 1639, 2522
BtsI GCAGTG 2 cut(s) 1867, 2298
BtsIMutI CAGTG 5 cut(s) 431, 773, 1867, 1962, 2298
BveI ACCTGC 1 cut(s) 157
Cac8I GCNNGC 8 cut(s) 180, 329, 756, 822, 1803, 1815, 1977, 2528
CaiI CAGNNNCTG 1 cut(s) 954
CciI TCATGA 2 cut(s) 705, 2436
CfoI GCGC 1 cut(s) 471
Cfr10I RCCGGY 2 cut(s) 482, 2205
Cfr13I GGNCC 2 cut(s) 1300, 1884
CsiI ACCWGGT 1 cut(s) 1880
Csp6I GTAC 8 cut(s) 102, 1154, 1698, 2023, 2044, 2134, 2144, 2362
CspAI ACCGGT 1 cut(s) 2205
CviQI GTAC 8 cut(s) 102, 1154, 1698, 2023, 2044, 2134, 2144, 2362
DpnI GATC 6 cut(s) 56, 546, 716, 1269, 1592, 2435
DpnII GATC 6 cut(s) 54, 544, 714, 1267, 1590, 2433
DraI TTTAAA 1 cut(s) 310
DraIII CACNNNGTG 1 cut(s) 1235
DrdI GACNNNNNNGTC 2 cut(s) 346, 2210
DriI GACNNNNNGTC 1 cut(s) 1380
DseDI GACNNNNNNGTC 2 cut(s) 346, 2210
EaeI YGGCCR 1 cut(s) 45
Eam1104I CTCTTC 2 cut(s) 1466, 2045
Eam1105I GACNNNNNGTC 1 cut(s) 1380
EarI CTCTTC 2 cut(s) 1466, 2045
Eco130I CCWWGG 4 cut(s) 48, 501, 654, 1586
Eco47I GGWCC 2 cut(s) 1300, 1884
Eco57I CTGAAG 4 cut(s) 126, 533, 636, 1754
EcoRII CCWGG 3 cut(s) 1071, 1836, 1880
EcoT14I CCWWGG 4 cut(s) 48, 501, 654, 1586
EcoT22I ATGCAT 2 cut(s) 1560, 2532
ErhI CCWWGG 4 cut(s) 48, 501, 654, 1586
FalI AAGNNNNNCTT 4 cut(s) 609, 641, 1959, 1991
FaqI GGGAC 2 cut(s) 823, 974
FauNDI CATATG 2 cut(s) 1660, 2446
FblI GTMKAC 1 cut(s) 2407
Fnu4HI GCNGC 6 cut(s) 630, 759, 1218, 1614, 1656, 2313
FokI GGATG 6 cut(s) 301, 525, 872, 1088, 1646, 2529
Fsp4HI GCNGC 6 cut(s) 630, 759, 1218, 1614, 1656, 2313
FspBI CTAG 8 cut(s) 179, 242, 1011, 1037, 1118, 1587, 1617, 2190
GlaI GCGC 1 cut(s) 470
GluI GCNGC 6 cut(s) 630, 759, 1218, 1614, 1656, 2313
GsaI CCCAGC 2 cut(s) 1107, 2455
GsuI CTGGAG 2 cut(s) 916, 1820
HaeIII GGCC 2 cut(s) 47, 430
HapII CCGG 4 cut(s) 418, 483, 971, 2206
HhaI GCGC 1 cut(s) 471
Hin6I GCGC 1 cut(s) 469
HinP1I GCGC 1 cut(s) 469
HincII GTYRAC 4 cut(s) 498, 1896, 2178, 2284
HindII GTYRAC 4 cut(s) 498, 1896, 2178, 2284
HindIII AAGCTT 1 cut(s) 2394
HpaII CCGG 4 cut(s) 418, 483, 971, 2206
HphI GGTGA 2 cut(s) 25, 1480
Hpy166II GTNNAC 8 cut(s) 498, 565, 1295, 1307, 1896, 2178, 2284, 2408
Hpy8I GTNNAC 8 cut(s) 498, 565, 1295, 1307, 1896, 2178, 2284, 2408
HpyAV CCTTC 6 cut(s) 167, 204, 887, 1241, 2036, 2479
HpyCH4III ACNGT 8 cut(s) 426, 495, 611, 956, 1138, 1292, 1957, 2098
HpyCH4IV ACGT 1 cut(s) 994
HpySE526I ACGT 1 cut(s) 994
HspAI GCGC 1 cut(s) 469
Kzo9I GATC 6 cut(s) 54, 544, 714, 1267, 1590, 2433
LguI GCTCTTC 1 cut(s) 1466
LmnI GCTCC 2 cut(s) 1492, 2317
Lsp1109I GCAGC 6 cut(s) 616, 745, 1229, 1600, 1642, 2299
LweI GCATC 7 cut(s) 79, 235, 1041, 1474, 2292, 2394, 2430
MabI ACCWGGT 1 cut(s) 1880
MaeI CTAG 8 cut(s) 179, 242, 1011, 1037, 1118, 1587, 1617, 2190
MaeII ACGT 1 cut(s) 994
MaeIII GTNAC 1 cut(s) 2092
MalI GATC 6 cut(s) 56, 546, 716, 1269, 1592, 2435
MboI GATC 6 cut(s) 54, 544, 714, 1267, 1590, 2433
MboII GAAGA 9 cut(s) 277, 539, 721, 1070, 1120, 1436, 1483, 1595, 2062
MfeI CAATTG 2 cut(s) 780, 885
MflI RGATCY 1 cut(s) 1267
MhlI GDGCHC 3 cut(s) 1990, 2329, 2420
MlsI TGGCCA 1 cut(s) 47
MluNI TGGCCA 1 cut(s) 47
MlyI GAGTC 4 cut(s) 956, 1369, 2279, 2330
Mox20I TGGCCA 1 cut(s) 47
Mph1103I ATGCAT 2 cut(s) 1560, 2532
MroXI GAANNNNTTC 3 cut(s) 1558, 1602, 2268
MscI TGGCCA 1 cut(s) 47
MseI TTAA 8 cut(s) 231, 309, 453, 1283, 1331, 1670, 1929, 2557
MslI CAYNNNNRTG 1 cut(s) 710
Msp20I TGGCCA 1 cut(s) 47
MspA1I CMGCKG 2 cut(s) 581, 944
MspCI CTTAAG 1 cut(s) 230
MspI CCGG 4 cut(s) 418, 483, 971, 2206
MspR9I CCNGG 4 cut(s) 418, 1073, 1838, 1882
MunI CAATTG 2 cut(s) 780, 885
Mva1269I GAATGC 2 cut(s) 1558, 1560
MvaI CCWGG 3 cut(s) 1073, 1838, 1882
MvnI CGCG 1 cut(s) 471
NciI CCSGG 1 cut(s) 418
NcoI CCATGG 1 cut(s) 48
NdeI CATATG 2 cut(s) 1660, 2446
NdeII GATC 6 cut(s) 54, 544, 714, 1267, 1590, 2433
NheI GCTAGC 1 cut(s) 178
NlaIV GGNNCC 2 cut(s) 1987, 2419
NmuCI GTSAC 1 cut(s) 2092
NsiI ATGCAT 2 cut(s) 1560, 2532
NspI RCATGY 3 cut(s) 820, 2530, 2534
NspV TTCGAA 1 cut(s) 1640
PaeI GCATGC 1 cut(s) 2530
PagI TCATGA 2 cut(s) 705, 2436
PciSI GCTCTTC 1 cut(s) 1466
PctI GAATGC 2 cut(s) 1558, 1560
PdmI GAANNNNTTC 3 cut(s) 1558, 1602, 2268
PfeI GAWTC 9 cut(s) 113, 203, 254, 463, 598, 1165, 1637, 1664, 2182
PinAI ACCGGT 1 cut(s) 2205
PkrI GCNGC 6 cut(s) 631, 760, 1219, 1615, 1657, 2314
PleI GAGTC 4 cut(s) 956, 1369, 2279, 2330
PpsI GAGTC 4 cut(s) 956, 1369, 2279, 2330
PsiI TTATAA 2 cut(s) 1718, 1844
Psp6I CCWGG 3 cut(s) 1071, 1836, 1880
PspFI CCCAGC 2 cut(s) 1103, 2451
PspGI CCWGG 3 cut(s) 1071, 1836, 1880
PspN4I GGNNCC 2 cut(s) 1987, 2419
PspPI GGNCC 2 cut(s) 1300, 1884
PsrI GAACNNNNNNTAC 2 cut(s) 555, 587
PstI CTGCAG 1 cut(s) 2293
PstNI CAGNNNCTG 1 cut(s) 954
PsuI RGATCY 1 cut(s) 1267
PvuII CAGCTG 2 cut(s) 581, 944
RsaI GTAC 8 cut(s) 103, 1155, 1699, 2024, 2045, 2135, 2145, 2363
RsaNI GTAC 8 cut(s) 102, 1154, 1698, 2023, 2044, 2134, 2144, 2362
RseI CAYNNNNRTG 1 cut(s) 710
SapI GCTCTTC 1 cut(s) 1466
SaqAI TTAA 8 cut(s) 231, 309, 453, 1283, 1331, 1670, 1929, 2557
SatI GCNGC 6 cut(s) 630, 759, 1218, 1614, 1656, 2313
Sau3AI GATC 6 cut(s) 54, 544, 714, 1267, 1590, 2433
Sau96I GGNCC 2 cut(s) 1300, 1884
ScaI AGTACT 1 cut(s) 2045
SchI GAGTC 4 cut(s) 956, 1369, 2279, 2330
ScrFI CCNGG 4 cut(s) 418, 1073, 1838, 1882
SduI GDGCHC 3 cut(s) 1990, 2329, 2420
SexAI ACCWGGT 1 cut(s) 1880
SfaNI GCATC 7 cut(s) 79, 235, 1041, 1474, 2292, 2394, 2430
SfcI CTRYAG 2 cut(s) 1953, 2289
SfuI TTCGAA 1 cut(s) 1640
SinI GGWCC 2 cut(s) 1300, 1884
SmiI ATTTAAAT 1 cut(s) 310
SmiMI CAYNNNNRTG 1 cut(s) 710
SmlI CTYRAG 3 cut(s) 230, 602, 2375
SmoI CTYRAG 3 cut(s) 230, 602, 2375
SphI GCATGC 1 cut(s) 2530
SsiI CCGC 3 cut(s) 848, 1157, 2315
SspMI CTAG 8 cut(s) 179, 242, 1011, 1037, 1118, 1587, 1617, 2190
StyD4I CCNGG 4 cut(s) 416, 1071, 1836, 1880
StyI CCWWGG 4 cut(s) 48, 501, 654, 1586
SwaI ATTTAAAT 1 cut(s) 310
TaaI ACNGT 8 cut(s) 426, 495, 611, 956, 1138, 1292, 1957, 2098
TaiI ACGT 1 cut(s) 997
TaqI TCGA 3 cut(s) 1640, 1848, 2202
TaqII GACCGA 1 cut(s) 1370
TatI WGTACW 2 cut(s) 2043, 2133
TfiI GAWTC 9 cut(s) 113, 203, 254, 463, 598, 1165, 1637, 1664, 2182
Tru1I TTAA 8 cut(s) 231, 309, 453, 1283, 1331, 1670, 1929, 2557
Tru9I TTAA 8 cut(s) 231, 309, 453, 1283, 1331, 1670, 1929, 2557
TscAI CASTG 5 cut(s) 431, 773, 1867, 1962, 2298
TseFI GTSAC 1 cut(s) 2092
TseI GCWGC 6 cut(s) 629, 758, 1217, 1613, 1655, 2312
Tsp45I GTSAC 1 cut(s) 2092
TspDTI ATGAA 8 cut(s) 204, 611, 722, 1349, 1356, 1551, 1677, 2277
TspGWI ACGGA 2 cut(s) 611, 1292
TspRI CASTG 5 cut(s) 431, 773, 1867, 1962, 2298
Vha464I CTTAAG 1 cut(s) 230
VpaK11BI GGWCC 2 cut(s) 1300, 1884
XapI RAATTY 5 cut(s) 128, 1014, 1394, 2065, 2169
XbaI TCTAGA 1 cut(s) 1010
XceI RCATGY 3 cut(s) 820, 2530, 2534
XmaJI CCTAGG 1 cut(s) 1586
XmiI GTMKAC 1 cut(s) 2407
XmnI GAANNNNTTC 3 cut(s) 1558, 1602, 2268
XspI CTAG 8 cut(s) 179, 242, 1011, 1037, 1118, 1587, 1617, 2190
ZrmI AGTACT 1 cut(s) 2045
Zsp2I ATGCAT 2 cut(s) 1560, 2532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.