Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0020622.1

Orthogroup ID

OG0003507

Physical Location & Seq

Genomic Coordinates Forward (+)

7642 .. 13290

Gene Structure 5649 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0020622.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3180 bp

atgctgaacttcaatgcaccactcctctcaacaaggcgtcccagaaactccaggagcacaagattacatggcaggtcactgagtgcgagtgaagaaagagttcccttttcgtgggaacaagctcctggcaagtccaagtatccaaacacaagcgacgataaccatgatggtgacacaccccggccaaagctgcccccgggctggtggcactggcacaagcctcttgaatcaactaacgttgttgttctggataaacagaatgagcagacacttcatgaccatgatggtggatgtgatgctgatgtggatgatgatgttcgcgctgttgactacaattatgttgatgatcctgatttcgacgatgaagccttctccgatgccatagatgtgttctcattgtcagaggctatagacattgtggaaaagaaggcacaaagagaacatgatcactcagatgctctgaagttgaagctcgcagagtccagtgagatgaatcaactgtctccaaactacataatcgagcgctttcttccagacgccgctgcattggctgcatcatctgctataaatctaagtgtatcacagatcaattcaaaccagaaactttgttatccatggaattaccctgaaccggaggcttgcgtgtcaagaacagttgggcaagctcactcttcacctaggggttgtggtttcttcccttggcggatgaagcagtacaagctctgtggtataaagagccctgtagtgtgttcacaacaacctcaagctatacacgccgctacttcatcggctccgattagagtgtggaaagaaatggccatggagatcactcagtatctattggcagctcaatcagcagatgcaagagttcgtactgaagcggagtctaatctgaggcaatttcaagagcaaaaccttcctgctttccttctgtcattgtcagttgagctagccaacagtgaaaagccaattgaatcccgtaggttggctggtattgttctgaagaactccttggatgctaaagatgctgttacaaaggaacgtcttgctcagcaatggatggctgttgatattgcttttaaatcccaaatcaaggaaatgctcttactgacacttgcgtcatctgtgcgagaggcaaggcacacctctgctcaagttcttgccaaagttgcttctattgatattcctcggaaacagtggcctgagctaattgcatatttgcttaataacatgactaagggagacagctctgctgatttgaaacagtcaaccttggaaactcttggttatgtatgcgaggagatatcccatcatgatctcgggcaagacgaggtgaattctattcttacagctgttgtacaaggaatgaaccttgctgagaacagtcctgaagtccgtcttgctgccacaaaggctttatataatgccttggagtttgctgagacaaactttcaaaacgagatggaacgaacatacatcatgaagatggtctgtgaaacagccttgtcgaaagaagtagagattaggcaggcggcttttgagtgccttgcttcaattgcgtctacgtactatgacgtgcttgaggcatacatgcaggctctctttgagcttacttcaaatgctgtaaagggggatgtagaggctgttgccctccaagcaatcgagttttggagctccatttgtgatgaagaaatagaattgcaagagtatgagagtgctgatactggggactctgggcatccacattcacgttttatagaaaaatctctatcatatctagttccaatgctgctggaaactttgctgaagcaggaagaagatgtagaccaggatgacagcatttggaatatctcaatggctggtggaacatgcctaggacttgttgcacgaactgttggtgatgcaattcttccccttgtgatgccatttgtggaggctaacatagcgcaaccagattggcgttgtcaggaagcagctactttggcatttggctcaatccttgaaggcccaaccgttgagaagctatcagtactggtccattcaggtttagatttcctattgaggttattgaaagatggaaacaaccatgtcaaagacactactgcctggactatcggccgtatatttgagtacctgcacagtcctgctggtggcttttctgttatttcttcagataaccttccaaaagtagtggaagtattgttggaaagcattaaggatgctccaaatgttgctgctaaggtttgttgggctatttataagcttgccgaggggtacgaggatgctggaaggcactcatcactttttacaccttatatccataggatcattgaaagtcttctttttgctgctagtcgtacagatgtagatgattctagattgaggtctgctgcctatgaatcattgaacgaagtagtgaggtgttctaatattaaagaaacatcacagattatacgagaactactccctgtgattttgcagaagttgagtcagactctagagcttcagattgtatcatcagatgacaaggaaaagcaagcagacttgcaggcttctctttgtggtgttctccaggttataatccagaaagttagcagtgctgatgatttggaaaccaggtccattatattgacacaggcagaccagataatgtttttgtttcttaatgtctttgcttgccgaagttctacggtgcacgaggaagcaatgcttgctattggtgcccttgctcatgctactggatctgagtttggcaagtaccttcctgacttctacaagtatttagagatggggttgcaaaatttcgaggaatatcaagtctgttctattacagttggtgtagttggtgatgttgttcgtgccttgaatgacaaggtattaccatattgtgatgggattatgcaacttctgttggcaaatctttctagtgaagcactcgaccggtctgtcaagcctcccatattctctgtctttagcgacatagctctctcaatagaggagaattttgagaagtatgttccctatgcagtgccaatgatgcagagagctgcagagctttgtgctcagatggaccccaatgatgatgagctaatggaatacggcaaccagcttaagtgtagcatatttgaagcttattcgggtatacttcagggatttaagaattcaaagtctgaggtatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000819 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0008092 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009987 GO:0010494 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019894 GO:0019899 GO:0019904 GO:0022402 GO:0022607 GO:0023052 GO:0030953 GO:0031072 GO:0031090 GO:0031122 GO:0031291 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0035556 GO:0035770 GO:0036464 GO:0040001 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0046907 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051225 GO:0051234 GO:0051276 GO:0051293 GO:0051303 GO:0051305 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051653 GO:0051656 GO:0051716 GO:0051879 GO:0065007 GO:0070013 GO:0070727 GO:0070925 GO:0071702 GO:0071705 GO:0071782 GO:0071840 GO:0072594 GO:0090307 GO:0097435 GO:0098813 GO:0098827 GO:0140014 GO:1902850 GO:1903047 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

HEAT HEAT_EZ IBN_N

Protein Analysis

1059

Amino Acids

117.88

Weight (kDa)

4.77

Isoelectric Point (pI)

42.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08947 AT3G08947
fragaria_vesca	FvH4_6g10890 FvH4_6g10890 FvH4_6g10890 FvH4_6g10970
malus_domestica	MD04G1163100.v1.1 MD12G1176600.v1.1
prunus_persica	Prupe.6G282600_v2.0.a1 Prupe.6G282600_v2.0.a1
pyrus_communis	pycom04g14590 pycom04g14600 pycom12g16660 pycom12g16670
rosa_chinensis	RchiOBHm_Chr3g0462121 RchiOBHm_Chr3g0462271
rosa_laevigata	RLG00000024872 RLG00000024881
rosa_multiflora	Rmu_sc0006188.1_g000001 Rmu_sc0007627.1_g000010 Rmu_sc0020622.1_g000002 Rmu_sc0031852.1_g000001
rosa_roxburghii	Rroxscaffold_6G00417630 Rroxscaffold_6G00417720
rosa_rugosa	Rorug03G0055400
rosa_samantha	Rh3AG113300 Rh3AG114100 Rh3BG116200 Rh3BG117200 Rh3CG119000 Rh3CG120000 Rh3DG118100 Rh3DG119000
rosa_wichuraiana	Rw3G009560 Rw3G009630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2259, 2579
AasI	GACNNNNNNGTC	2 cut(s)	1117, 2945
Acc36I	ACCTGC	2 cut(s)	63, 2142
AccB1I	GGYRCC	1 cut(s)	2720
AccI	GTMKAC	3 cut(s)	1562, 1824, 3142
AccII	CGCG	1 cut(s)	321
AciI	CCGC	5 cut(s)	540, 703, 777, 881, 1532
AclI	AACGTT	1 cut(s)	237
AclWI	GGATC	3 cut(s)	341, 2333, 2749
AcoI	YGGCCR	3 cut(s)	182, 816, 2116
AcsI	RAATTY	4 cut(s)	1336, 2800, 3001, 3160
AcuI	CTGAAG	8 cut(s)	482, 897, 1022, 1410, 1826, 2154, 2489, 3131
AcyI	GRCGYC	2 cut(s)	37, 537
AdeI	CACNNNGTG	1 cut(s)	83
AfaI	GTAC	9 cut(s)	716, 874, 1359, 1568, 2031, 2132, 2276, 2359, 2759
AfeI	AGCGCT	1 cut(s)	524
AfiI	CCNNNNNNNGG	6 cut(s)	111, 201, 631, 985, 1093, 2150
AflII	CTTAAG	1 cut(s)	3110
AgeI	ACCGGT	1 cut(s)	2940
AjiI	CACGTC	1 cut(s)	1576
AjnI	CCWGG	6 cut(s)	50, 124, 1827, 2105, 2571, 2615
AjuI	GAANNNNNNNTTGG	2 cut(s)	995, 1027
Alw21I	GWGCWC	4 cut(s)	59, 1676, 2697, 3064
Alw26I	GTCTC	3 cut(s)	507, 1236, 1436
Alw44I	GTGCAC	1 cut(s)	2693
AlwI	GGATC	3 cut(s)	341, 2333, 2749
Ama87I	CYCGRG	2 cut(s)	196, 1319
Aor51HI	AGCGCT	1 cut(s)	524
AoxI	GGCC	5 cut(s)	182, 816, 1199, 2005, 2116
ApaLI	GTGCAC	1 cut(s)	2693
ApoI	RAATTY	4 cut(s)	1336, 2800, 3001, 3160
AsiGI	ACCGGT	1 cut(s)	2940
Asp700I	GAANNNNTTC	2 cut(s)	99, 2337
AspA2I	CCTAGG	2 cut(s)	677, 1873
AspLEI	GCGC	3 cut(s)	323, 525, 1948
AspS9I	GGNCC	4 cut(s)	2006, 2035, 2619, 3070
AsuC2I	CCSGG	3 cut(s)	181, 197, 198
AsuHPI	GGTGA	5 cut(s)	182, 666, 1345, 1910, 2858
AsuNHI	GCTAGC	1 cut(s)	949
AvaI	CYCGRG	2 cut(s)	196, 1319
AvaII	GGWCC	3 cut(s)	2035, 2619, 3070
AvrII	CCTAGG	2 cut(s)	677, 1873
BaeGI	GKGCMC	2 cut(s)	2697, 2725
BalI	TGGCCA	1 cut(s)	818
BanI	GGYRCC	1 cut(s)	2720
BanII	GRGCYC	2 cut(s)	740, 1676
BauI	CACGAG	1 cut(s)	2696
BbsI	GAAGAC	1 cut(s)	2330
Bbv12I	GWGCWC	4 cut(s)	59, 1676, 2697, 3064
BceAI	ACGGC	2 cut(s)	2103, 3115
BciT130I	CCWGG	6 cut(s)	52, 126, 1829, 2107, 2573, 2617
BciVI	GTATCC	1 cut(s)	150
BclI	TGATCA	1 cut(s)	445
BcnI	CCSGG	3 cut(s)	181, 197, 198
BcoDI	GTCTC	3 cut(s)	507, 1236, 1436
BfaI	CTAG	8 cut(s)	678, 950, 1778, 1874, 2352, 2376, 2498, 2925
BfmI	CTRYAG	3 cut(s)	408, 741, 3048
BfoI	RGCGCY	1 cut(s)	526
BfrI	CTTAAG	1 cut(s)	3110
BfuAI	ACCTGC	2 cut(s)	63, 2142
BfuI	GTATCC	1 cut(s)	150
BglI	GCCNNNNNGGC	1 cut(s)	1412
BlnI	CCTAGG	2 cut(s)	677, 1873
BlpI	GCTNAGC	1 cut(s)	1050
BmcAI	AGTACT	1 cut(s)	2031
Bme1390I	CCNGG	9 cut(s)	52, 126, 181, 197, 198, 1829, 2107, 2573, 2617
Bme18I	GGWCC	3 cut(s)	2035, 2619, 3070
BmeT110I	CYCGRG	2 cut(s)	196, 1319
BmgBI	CACGTC	1 cut(s)	1576
BmgT120I	GGNCC	4 cut(s)	2006, 2035, 2619, 3070
BmiI	GGNNCC	3 cut(s)	792, 2722, 3072
BmrFI	CCNGG	9 cut(s)	52, 126, 181, 197, 198, 1829, 2107, 2573, 2617
BmrI	ACTGGG	1 cut(s)	1734
BmtI	GCTAGC	1 cut(s)	953
BmuI	ACTGGG	1 cut(s)	1734
BpiI	GAAGAC	1 cut(s)	2330
BplI	GAGNNNNNCTC	4 cut(s)	2448, 2480, 2479, 2511
BpmI	CTGGAG	2 cut(s)	34, 2555
Bpu10I	CCTNAGC	2 cut(s)	1203, 2238
Bpu1102I	GCTNAGC	1 cut(s)	1050
BpuEI	CTTGAG	3 cut(s)	747, 1137, 1601
BpuMI	CCSGG	3 cut(s)	181, 197, 198
BsaAI	YACGTR	1 cut(s)	1566
BsaHI	GRCGYC	2 cut(s)	37, 537
BsaWI	WCCGGW	2 cut(s)	631, 2940
Bsc4I	CCNNNNNNNGG	6 cut(s)	111, 201, 631, 985, 1093, 2150
Bse118I	RCCGGY	1 cut(s)	2940
Bse1I	ACTGG	5 cut(s)	215, 483, 1729, 2037, 2743
Bse3DI	GCAATG	2 cut(s)	1061, 2712
BseBI	CCWGG	6 cut(s)	52, 126, 1829, 2107, 2573, 2617
BseLI	CCNNNNNNNGG	6 cut(s)	111, 201, 631, 985, 1093, 2150
BseMI	GCAATG	2 cut(s)	1061, 2712
BseNI	ACTGG	5 cut(s)	215, 483, 1729, 2037, 2743
BseRI	GAGGAG	3 cut(s)	14, 1313, 3011
BseSI	GKGCMC	2 cut(s)	2697, 2725
BseX3I	CGGCCG	1 cut(s)	2116
BsgI	GTGCAG	1 cut(s)	2120
Bsh1236I	CGCG	1 cut(s)	321
Bsh1285I	CGRYCG	2 cut(s)	2119, 2941
BshFI	GGCC	5 cut(s)	184, 818, 1201, 2007, 2118
BshNI	GGYRCC	1 cut(s)	2720
BshTI	ACCGGT	1 cut(s)	2940
BsiEI	CGRYCG	2 cut(s)	2119, 2941
BsiHKAI	GWGCWC	4 cut(s)	59, 1676, 2697, 3064
BsiHKCI	CYCGRG	2 cut(s)	196, 1319
BsiSI	CCGG	4 cut(s)	181, 197, 632, 2941
BslFI	GGGAC	2 cut(s)	24, 1742
BslI	CCNNNNNNNGG	6 cut(s)	111, 201, 631, 985, 1093, 2150
BsmAI	GTCTC	3 cut(s)	507, 1236, 1436
BsmFI	GGGAC	2 cut(s)	24, 1742
BsnI	GGCC	5 cut(s)	184, 818, 1201, 2007, 2118
BsoBI	CYCGRG	2 cut(s)	196, 1319
Bsp1286I	GDGCHC	6 cut(s)	59, 740, 1676, 2697, 2725, 3064
Bsp1407I	TGTACA	1 cut(s)	1357
Bsp143I	GATC	7 cut(s)	346, 445, 585, 825, 1315, 2325, 2741
Bsp1720I	GCTNAGC	1 cut(s)	1050
Bsp19I	CCATGG	2 cut(s)	614, 819
BspACI	CCGC	5 cut(s)	540, 703, 777, 881, 1532
BspANI	GGCC	5 cut(s)	184, 818, 1201, 2007, 2118
BspFNI	CGCG	1 cut(s)	321
BspHI	TCATGA	3 cut(s)	274, 1312, 1479
BspLI	GGNNCC	3 cut(s)	792, 2722, 3072
BspMAI	CTGCAG	1 cut(s)	3052
BspMI	ACCTGC	2 cut(s)	63, 2142
BspOI	GCTAGC	1 cut(s)	953
BspPI	GGATC	3 cut(s)	341, 2333, 2749
BspT107I	GGYRCC	1 cut(s)	2720
BspTI	CTTAAG	1 cut(s)	3110
BsrDI	GCAATG	2 cut(s)	1061, 2712
BsrFI	RCCGGY	1 cut(s)	2940
BsrGI	TGTACA	1 cut(s)	1357
BsrI	ACTGG	5 cut(s)	215, 483, 1729, 2037, 2743
BssAI	RCCGGY	1 cut(s)	2940
BssMI	GATC	7 cut(s)	346, 445, 585, 825, 1315, 2325, 2741
BssNAI	GTATAC	1 cut(s)	3143
BssNI	GRCGYC	2 cut(s)	37, 537
BssSI	CACGAG	1 cut(s)	2696
BssT1I	CCWWGG	8 cut(s)	614, 677, 698, 819, 1011, 1272, 1428, 1873
Bst1107I	GTATAC	1 cut(s)	3143
Bst2BI	CACGAG	1 cut(s)	2696
Bst2UI	CCWGG	6 cut(s)	52, 126, 1829, 2107, 2573, 2617
Bst6I	CTCTTC	1 cut(s)	676
BstACI	GRCGYC	2 cut(s)	37, 537
BstAFI	CTTAAG	1 cut(s)	3110
BstAPI	GCANNNNNTGC	3 cut(s)	551, 560, 2711
BstAUI	TGTACA	1 cut(s)	1357
BstBAI	YACGTR	1 cut(s)	1566
BstDSI	CCRYGG	2 cut(s)	614, 819
BstFNI	CGCG	1 cut(s)	321
BstH2I	RGCGCY	1 cut(s)	526
BstHHI	GCGC	3 cut(s)	323, 525, 1948
BstKTI	GATC	7 cut(s)	349, 448, 588, 828, 1318, 2328, 2744
BstMAI	GTCTC	3 cut(s)	507, 1236, 1436
BstMBI	GATC	7 cut(s)	346, 445, 585, 825, 1315, 2325, 2741
BstMCI	CGRYCG	2 cut(s)	2119, 2941
BstNI	CCWGG	6 cut(s)	52, 126, 1829, 2107, 2573, 2617
BstNSI	RCATGY	2 cut(s)	1594, 1872
BstSCI	CCNGG	9 cut(s)	50, 124, 179, 195, 196, 1827, 2105, 2571, 2615
BstSFI	CTRYAG	3 cut(s)	408, 741, 3048
BstSLI	GKGCMC	2 cut(s)	2697, 2725
BstSNI	TACGTA	1 cut(s)	1566
BstUI	CGCG	1 cut(s)	321
BstV2I	GAAGAC	1 cut(s)	2330
BstX2I	RGATCY	1 cut(s)	2741
BstXI	CCANNNNNNTGG	1 cut(s)	287
BstYI	RGATCY	1 cut(s)	2741
BstZ17I	GTATAC	1 cut(s)	3143
BstZI	CGGCCG	1 cut(s)	2116
BsuI	GTATCC	1 cut(s)	150
BsuRI	GGCC	5 cut(s)	184, 818, 1201, 2007, 2118
BtgI	CCRYGG	2 cut(s)	614, 819
BtrI	CACGTC	1 cut(s)	1576
BtsI	GCAGTG	2 cut(s)	2602, 3033
BtsIMutI	CAGTG	7 cut(s)	77, 208, 490, 964, 1202, 2602, 3033
BveI	ACCTGC	2 cut(s)	63, 2142
CciI	TCATGA	3 cut(s)	274, 1312, 1479
CfoI	GCGC	3 cut(s)	323, 525, 1948
Cfr10I	RCCGGY	1 cut(s)	2940
Cfr13I	GGNCC	4 cut(s)	2006, 2035, 2619, 3070
Cfr9I	CCCGGG	1 cut(s)	196
CseI	GACGC	4 cut(s)	26, 545, 1107, 1548
CsiI	ACCWGGT	1 cut(s)	2615
Csp6I	GTAC	9 cut(s)	715, 873, 1358, 1567, 2030, 2131, 2275, 2358, 2758
CspAI	ACCGGT	1 cut(s)	2940
CspCI	CAANNNNNGTGG	4 cut(s)	706, 741, 2172, 2207
CviQI	GTAC	9 cut(s)	715, 873, 1358, 1567, 2030, 2131, 2275, 2358, 2758
DpnI	GATC	7 cut(s)	348, 447, 587, 827, 1317, 2327, 2743
DpnII	GATC	7 cut(s)	346, 445, 585, 825, 1315, 2325, 2741
DraI	TTTAAA	1 cut(s)	1081
DraIII	CACNNNGTG	1 cut(s)	83
DrdI	GACNNNNNNGTC	2 cut(s)	1117, 2945
DseDI	GACNNNNNNGTC	2 cut(s)	1117, 2945
EaeI	YGGCCR	3 cut(s)	182, 816, 2116
EagI	CGGCCG	1 cut(s)	2116
Eam1104I	CTCTTC	1 cut(s)	676
EarI	CTCTTC	1 cut(s)	676
EciI	GGCGGA	1 cut(s)	718
Ecl136II	GAGCTC	1 cut(s)	1674
EclXI	CGGCCG	1 cut(s)	2116
Eco105I	TACGTA	1 cut(s)	1566
Eco130I	CCWWGG	8 cut(s)	614, 677, 698, 819, 1011, 1272, 1428, 1873
Eco24I	GRGCYC	2 cut(s)	740, 1676
Eco32I	GATATC	1 cut(s)	1305
Eco47I	GGWCC	3 cut(s)	2035, 2619, 3070
Eco47III	AGCGCT	1 cut(s)	524
Eco52I	CGGCCG	1 cut(s)	2116
Eco53kI	GAGCTC	1 cut(s)	1674
Eco57I	CTGAAG	8 cut(s)	482, 897, 1022, 1410, 1826, 2154, 2489, 3131
Eco88I	CYCGRG	2 cut(s)	196, 1319
EcoICRI	GAGCTC	1 cut(s)	1674
EcoRI	GAATTC	2 cut(s)	1336, 3160
EcoRII	CCWGG	6 cut(s)	50, 124, 1827, 2105, 2571, 2615
EcoRV	GATATC	1 cut(s)	1305
EcoT14I	CCWWGG	8 cut(s)	614, 677, 698, 819, 1011, 1272, 1428, 1873
EcoT38I	GRGCYC	2 cut(s)	740, 1676
ErhI	CCWWGG	8 cut(s)	614, 677, 698, 819, 1011, 1272, 1428, 1873
FalI	AAGNNNNNCTT	6 cut(s)	995, 1027, 1383, 1415, 2694, 2726
FaqI	GGGAC	2 cut(s)	24, 1742
FbaI	TGATCA	1 cut(s)	445
FblI	GTMKAC	3 cut(s)	1562, 1824, 3142
FriOI	GRGCYC	2 cut(s)	740, 1676
FspBI	CTAG	8 cut(s)	678, 950, 1778, 1874, 2352, 2376, 2498, 2925
GlaI	GCGC	3 cut(s)	322, 524, 1947
GsuI	CTGGAG	2 cut(s)	34, 2555
HaeII	RGCGCY	1 cut(s)	526
HaeIII	GGCC	5 cut(s)	184, 818, 1201, 2007, 2118
HapII	CCGG	4 cut(s)	181, 197, 632, 2941
HgaI	GACGC	4 cut(s)	26, 545, 1107, 1548
HhaI	GCGC	3 cut(s)	323, 525, 1948
Hin1I	GRCGYC	2 cut(s)	37, 537
Hin6I	GCGC	3 cut(s)	321, 523, 1946
HinP1I	GCGC	3 cut(s)	321, 523, 1946
HincII	GTYRAC	2 cut(s)	328, 1269
HindII	GTYRAC	2 cut(s)	328, 1269
HindIII	AAGCTT	2 cut(s)	2261, 3129
HpaII	CCGG	4 cut(s)	181, 197, 632, 2941
HphI	GGTGA	5 cut(s)	182, 666, 1345, 1910, 2858
Hpy166II	GTNNAC	7 cut(s)	328, 752, 1269, 1563, 1825, 2695, 3143
Hpy8I	GTNNAC	7 cut(s)	328, 752, 1269, 1563, 1825, 2695, 3143
Hpy99I	CGWCG	2 cut(s)	158, 362
HpyAV	CCTTC	8 cut(s)	379, 421, 926, 938, 1997, 2189, 2283, 2771
HpyCH4IV	ACGT	5 cut(s)	237, 1042, 1565, 1575, 1750
HpySE526I	ACGT	5 cut(s)	237, 1042, 1565, 1575, 1750
Hsp92I	GRCGYC	2 cut(s)	37, 537
HspAI	GCGC	3 cut(s)	321, 523, 1946
Ksp22I	TGATCA	1 cut(s)	445
Kzo9I	GATC	7 cut(s)	346, 445, 585, 825, 1315, 2325, 2741
LmnI	GCTCC	6 cut(s)	54, 127, 796, 1671, 1679, 2227
MabI	ACCWGGT	1 cut(s)	2615
MaeI	CTAG	8 cut(s)	678, 950, 1778, 1874, 2352, 2376, 2498, 2925
MaeII	ACGT	5 cut(s)	237, 1042, 1565, 1575, 1750
MaeIII	GTNAC	3 cut(s)	75, 170, 1030
MalI	GATC	7 cut(s)	348, 447, 587, 827, 1317, 2327, 2743
MboI	GATC	7 cut(s)	346, 445, 585, 825, 1315, 2325, 2741
MfeI	CAATTG	2 cut(s)	969, 1554
MflI	RGATCY	1 cut(s)	2741
MhlI	GDGCHC	6 cut(s)	59, 740, 1676, 2697, 2725, 3064
MlsI	TGGCCA	1 cut(s)	818
MluNI	TGGCCA	1 cut(s)	818
MlyI	GAGTC	5 cut(s)	488, 893, 1724, 2488, 2497
MmeI	TCCRAC	1 cut(s)	2184
Mox20I	TGGCCA	1 cut(s)	818
MroXI	GAANNNNTTC	2 cut(s)	99, 2337
MscI	TGGCCA	1 cut(s)	818
MseI	TTAA	7 cut(s)	1080, 1224, 2214, 2433, 2664, 3111, 3156
MslI	CAYNNNNRTG	6 cut(s)	168, 279, 285, 386, 453, 1484
Msp20I	TGGCCA	1 cut(s)	818
MspA1I	CMGCKG	2 cut(s)	542, 1352
MspCI	CTTAAG	1 cut(s)	3110
MspI	CCGG	4 cut(s)	181, 197, 632, 2941
MspR9I	CCNGG	9 cut(s)	52, 126, 181, 197, 198, 1829, 2107, 2573, 2617
MunI	CAATTG	2 cut(s)	969, 1554
MvaI	CCWGG	6 cut(s)	52, 126, 1829, 2107, 2573, 2617
MvnI	CGCG	1 cut(s)	321
NciI	CCSGG	3 cut(s)	181, 197, 198
NcoI	CCATGG	2 cut(s)	614, 819
NdeII	GATC	7 cut(s)	346, 445, 585, 825, 1315, 2325, 2741
NheI	GCTAGC	1 cut(s)	949
NlaIV	GGNNCC	3 cut(s)	792, 2722, 3072
NmeAIII	GCCGAG	1 cut(s)	2293
NmuCI	GTSAC	2 cut(s)	75, 170
NspI	RCATGY	2 cut(s)	1594, 1872
PagI	TCATGA	3 cut(s)	274, 1312, 1479
PcsI	WCGNNNNNNNCGW	1 cut(s)	1326
PdmI	GAANNNNTTC	2 cut(s)	99, 2337
PfeI	GAWTC	5 cut(s)	227, 493, 974, 2372, 2399
PfoI	TCCNGGA	1 cut(s)	50
PinAI	ACCGGT	1 cut(s)	2940
PleI	GAGTC	5 cut(s)	487, 892, 1724, 2488, 2496
PpsI	GAGTC	5 cut(s)	487, 892, 1724, 2488, 2496
Ppu21I	YACGTR	1 cut(s)	1566
PsiI	TTATAA	2 cut(s)	2259, 2579
Psp124BI	GAGCTC	1 cut(s)	1676
Psp1406I	AACGTT	1 cut(s)	237
Psp6I	CCWGG	6 cut(s)	50, 124, 1827, 2105, 2571, 2615
PspGI	CCWGG	6 cut(s)	50, 124, 1827, 2105, 2571, 2615
PspN4I	GGNNCC	3 cut(s)	792, 2722, 3072
PspPI	GGNCC	4 cut(s)	2006, 2035, 2619, 3070
PstI	CTGCAG	1 cut(s)	3052
PsuI	RGATCY	1 cut(s)	2741
PvuII	CAGCTG	1 cut(s)	1352
RsaI	GTAC	9 cut(s)	716, 874, 1359, 1568, 2031, 2132, 2276, 2359, 2759
RsaNI	GTAC	9 cut(s)	715, 873, 1358, 1567, 2030, 2131, 2275, 2358, 2758
RseI	CAYNNNNRTG	6 cut(s)	168, 279, 285, 386, 453, 1484
SacI	GAGCTC	1 cut(s)	1676
SaqAI	TTAA	7 cut(s)	1080, 1224, 2214, 2433, 2664, 3111, 3156
Sau3AI	GATC	7 cut(s)	346, 445, 585, 825, 1315, 2325, 2741
Sau96I	GGNCC	4 cut(s)	2006, 2035, 2619, 3070
ScaI	AGTACT	1 cut(s)	2031
SchI	GAGTC	5 cut(s)	488, 893, 1724, 2488, 2497
ScrFI	CCNGG	9 cut(s)	52, 126, 181, 197, 198, 1829, 2107, 2573, 2617
SduI	GDGCHC	6 cut(s)	59, 740, 1676, 2697, 2725, 3064
SexAI	ACCWGGT	1 cut(s)	2615
SfcI	CTRYAG	3 cut(s)	408, 741, 3048
SinI	GGWCC	3 cut(s)	2035, 2619, 3070
SmaI	CCCGGG	1 cut(s)	198
SmiMI	CAYNNNNRTG	6 cut(s)	168, 279, 285, 386, 453, 1484
SmlI	CTYRAG	4 cut(s)	762, 1152, 1580, 3110
SmoI	CTYRAG	4 cut(s)	762, 1152, 1580, 3110
SnaBI	TACGTA	1 cut(s)	1566
SsiI	CCGC	5 cut(s)	540, 703, 777, 881, 1532
SspI	AATATT	1 cut(s)	2431
SspMI	CTAG	8 cut(s)	678, 950, 1778, 1874, 2352, 2376, 2498, 2925
SstI	GAGCTC	1 cut(s)	1676
StyD4I	CCNGG	9 cut(s)	50, 124, 179, 195, 196, 1827, 2105, 2571, 2615
StyI	CCWWGG	8 cut(s)	614, 677, 698, 819, 1011, 1272, 1428, 1873
TaiI	ACGT	5 cut(s)	240, 1045, 1568, 1578, 1753
TaqI	TCGA	6 cut(s)	357, 519, 1508, 1662, 2805, 2937
TatI	WGTACW	3 cut(s)	714, 1357, 2029
TauI	GCSGC	3 cut(s)	542, 779, 1535
TfiI	GAWTC	5 cut(s)	227, 493, 974, 2372, 2399
Tru1I	TTAA	7 cut(s)	1080, 1224, 2214, 2433, 2664, 3111, 3156
Tru9I	TTAA	7 cut(s)	1080, 1224, 2214, 2433, 2664, 3111, 3156
TscAI	CASTG	7 cut(s)	84, 215, 490, 964, 1202, 2602, 3033
TseFI	GTSAC	2 cut(s)	75, 170
Tsp45I	GTSAC	2 cut(s)	75, 170
TspDTI	ATGAA	9 cut(s)	263, 378, 506, 722, 774, 1382, 1496, 1701, 2412
TspGWI	ACGGA	1 cut(s)	1385
TspMI	CCCGGG	1 cut(s)	196
TspRI	CASTG	7 cut(s)	84, 215, 490, 964, 1202, 2602, 3033
Vha464I	CTTAAG	1 cut(s)	3110
VneI	GTGCAC	1 cut(s)	2693
VpaK11BI	GGWCC	3 cut(s)	2035, 2619, 3070
XapI	RAATTY	4 cut(s)	1336, 2800, 3001, 3160
XbaI	TCTAGA	2 cut(s)	2375, 2497
XceI	RCATGY	2 cut(s)	1594, 1872
XmaI	CCCGGG	1 cut(s)	196
XmaJI	CCTAGG	2 cut(s)	677, 1873
XmiI	GTMKAC	3 cut(s)	1562, 1824, 3142
XmnI	GAANNNNTTC	2 cut(s)	99, 2337
XspI	CTAG	8 cut(s)	678, 950, 1778, 1874, 2352, 2376, 2498, 2925
ZrmI	AGTACT	1 cut(s)	2031

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.