RchiOBHm_Chr3g0462121

HEAT-like repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0003507
Physical Location & Seq
Forward (+)
9910724 .. 9914702
3979 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42851

Sequence Viewer

Length: 2604 bp
ATGGAGATCACTCAGTATCTATTGTCAGCTCAATCAGCCGATGCAAGAGTTCGTACTGAAGCAGAATCTAATCTGAGGAAATTTCAAGAGCAAAACCTACCTGCTTTCCTTCTGTTGTTGTCGGTTGAGCTAGCAAACAATGAAAAGCCAGTTGAGTCCCGAAGGTTGGCTGGTATTGTTCTTAAGAACTTACTAGATGTCAAAGATTCTGCTACAAAGAAACATCTTGCTCAGCAATGGATGGCTATTGATATTGCATTTAAATCCCAAATCAAGAGCTGGCTCTTACAGACACTTGGGTCATCTGTGCCAGAGGCAAGGCGCACCTCTGCCCAAGTTCTTGCCAAAGTTGCTTCTATTGATGTTCCCCAGAAACAGTGGCCTGAGCTAATCGGACATTTGCTTAATAACATGATTCAGCGCGATAGCTCTGCTGATTTGAAACAGTCAACCTTGGAAACTCTTGGTTATGTATGCGAGGAAATATCCCATCCTGATCTTCAGCAAGATGAGGTAAACTCTGTTCTTACAGCTGTAATTCAAGGAATGAATCTTGCTGAGAACAGTTCTGAAGTCCGTCTTGCTGCAACAAGGGCATTATGTAATGCCTTGGAGTTTGCTCAGACAAACTTTGAAAATGAGACGGAACGAACTTACATCATGAAGATGATCTGTGAGACTGCCTTGTCTAAGGAGGTAGAGGTTAGGCAGGCTGCTTTTGAGTGCCTTGCTTCAATTGCTTCTATGTACTATTCTGTGCTTGGGACTTACATGCAGGCTCTCTTTGAGCTTACATCAAATGCGGTAAAAGGGGATGTAGAACCTGTTGCCCTTCAAGCAATTGAGTTCTGGAGTTCCATTTGTGAAAAAGAAATAGAATTGCAAAAGTATAAGACAGCTGACAGGAACTGTTGGGACTCTCTACCGGACTTTGTGCCTCCTCATTCACGTTTTATAGAAAAATCTCGAATTTCTCTAATTCCAATATTGCTAGAGATTTTGCTGATGCAGGAAGAAAATGTAAGCCAGTATGACAACATTTGGAATATCTCAATGGCTGGTAAGAAATGCCTAGAACTTGTTGCCCAAACTGTTGGGTTTGTCATTGTACCCCTTGTGATTCCATTTGTGGTGGCTAACAGAGTGAAACCAGATTGGCATTGTCGGGAGGCAGCAGTTTTTGCACTTGGTGCAATTATTGAAGGCTCAACCATTTATCAGGATCTTGGGGTCTTATTAAAATACTGTGAACTGGTCCGTGAACTTATAGATGACTTGCTTTTCTTAATGAATGATGAAAACAACCAAGTCAAAGAAACTACTGCATGGACTCTCGGTCGTATATTTGAATTTTTGCATAGTCCTGTTGGTGGATTTTCTGTGATTACTTCTGATAATCTTCCAAGAGTGGTAGATATATTGGTGAAGAGCGTTAAGGATGCTCCAAATGTTGCAACTAAGGTGTGTCGGGCGATTTATACACTTGCTGAGGGCTATGAGGAAGCTGGAATGCACTCATCTTTTTTTATGCCATATATCCCTAGGATCATTGAAAGTCTTCTTTTTGCTGCTAGTCGTGCAGATTTGGATGATTTGAAATTGACGTCTGCTGCATATGAATCATTAAACGAGGTAGTGAGGTGTTCCAGCAGTACTGAAGCACCACAGATTATAAGAGAACTACTCTCTGTGATTTTGGAGAGGTTGAGTCAGACTTTAGAGCGTCAGATAGTATCATCAGATGGCAAGGAAAAGCAAGCAGACTTGCAGGCTTCTCTCTGTGGCGTTCTCCAGGTTATAATCGAGAAAGTTAGCAGTGCAGATGATTTAGAAACCAGGTCCATTATGTTGACACAGGCAGACCAGATGATGTTTTTGTTTCTTAATGTCTTTTCTTGCCGAAGTTCTACAGTGCATGAGGAAGCCATGCTTGCTATTGGTGCCCTTGCTCATGCTACTGGGTCTGAGTTTGGCAAGTACCTTCCTGAATTATACAAGTACTTGAAGAGGGGGTTGCAAAATTTCAAGGACTATCAAGCCTGTTCTGTCACAGTTGGTGTGGTTGGCGACATTGTTCGTGCCTTGAAGTACAAGGTAGTACCATATTGTGATGGGATTATGCAAATTCTGTTGACGAATCTTTCTAGTGAAGCACTCGACCGGTCTGTCAAGCCTCCCATATTCTCTGTCATTGGCGACATAGCTCTCTCAATAGATGAAAACTTTCAGAAGTATGTTGACTCTGCAGTGCCAATGATGCAGAGAGCTGCGGAGCTGTGTGCTCAGATGGACTCCAATGATGATGAGTTATTGGAGTACGGCAGTCAGCTCAAGTGTAGCATCTTTGAAGCTTATTCTGGTATACTTCGGGGCACCAAGAAGTCTAAGATCATGATGCCATATGCCCAGCTTCTCTACGAGTTTATAGGATTTGTTTTGAAGGAGAAAGACAGGGATATCCTTCTAAGAAAAGCTTTAGCTGCTGTGATGGATGACCTTGCAGATTTACTTGGTACAAACTCAAAGACACTCTTTGGAGACCTTACTGCTCGTGTAACATATACTGGTGCGTGTCTTCAATCTGATTGTGATAACCTGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000060 GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000819 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0008092 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009987 GO:0010494 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019894 GO:0019899 GO:0019904 GO:0022402 GO:0022607 GO:0023052 GO:0030953 GO:0031072 GO:0031090 GO:0031122 GO:0031291 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0035556 GO:0035770 GO:0036464 GO:0040001 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0046907 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051225 GO:0051234 GO:0051276 GO:0051293 GO:0051303 GO:0051305 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051653 GO:0051656 GO:0051716 GO:0051879 GO:0065007 GO:0070013 GO:0070727 GO:0070925 GO:0071702 GO:0071705 GO:0071782 GO:0071840 GO:0072594 GO:0090307 GO:0097435 GO:0098813 GO:0098827 GO:0140014 GO:1902850 GO:1903047 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
HEAT HEAT_EZ IBN_N

Protein Analysis

867

Amino Acids

96.82

Weight (kDa)

4.94

Isoelectric Point (pI)

40.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBN_N PF03810 21 - 101 7.6e-09 Importin-beta N-terminal domain
TPR_IPO5 PF25780 104 - 264 4.4e-08 IPO5-like, TPR repeats
HEAT_EZ PF13513 386 - 448 1.9e-06 HEAT-like repeat
TPR_IMB1 PF25574 470 - 839 1.6e-87 Importin subunit beta-1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1673, 1799
AasI GACNNNNNNGTC 3 cut(s) 298, 685, 2165
AatII GACGTC 1 cut(s) 1607
Acc36I ACCTGC 1 cut(s) 109
AccB1I GGYRCC 2 cut(s) 1940, 2372
AccI GTMKAC 1 cut(s) 2362
AccII CGCG 1 cut(s) 423
AciI CCGC 2 cut(s) 803, 2270
AclWI GGATC 2 cut(s) 1230, 1553
AcsI RAATTY 5 cut(s) 80, 969, 1349, 2020, 2124
AcuI CTGAAG 4 cut(s) 78, 485, 591, 1677
AcyI GRCGYC 1 cut(s) 1604
AdeI CACNNNGTG 1 cut(s) 1190
AfiI CCNNNNNNNGG 2 cut(s) 166, 1370
AflII CTTAAG 1 cut(s) 182
AgeI ACCGGT 1 cut(s) 2160
AhdI GACNNNNNGTC 1 cut(s) 1335
AjnI CCWGG 2 cut(s) 1791, 1835
Alw21I GWGCWC 1 cut(s) 2284
Alw26I GTCTC 3 cut(s) 635, 671, 2532
AlwI GGATC 2 cut(s) 1230, 1553
AlwNI CAGNNNCTG 1 cut(s) 909
AoxI GGCC 1 cut(s) 380
ApeKI GCWGC 7 cut(s) 584, 713, 1172, 1568, 1610, 2267, 2480
ApoI RAATTY 5 cut(s) 80, 969, 1349, 2020, 2124
AsiGI ACCGGT 1 cut(s) 2160
Asp700I GAANNNNTTC 2 cut(s) 1557, 2223
AspA2I CCTAGG 1 cut(s) 1541
AspLEI GCGC 2 cut(s) 324, 423
AspS9I GGNCC 2 cut(s) 1255, 1839
AsuHPI GGTGA 1 cut(s) 1435
AsuNHI GCTAGC 1 cut(s) 130
AvaII GGWCC 2 cut(s) 1255, 1839
AvrII CCTAGG 1 cut(s) 1541
BaeGI GKGCMC 2 cut(s) 1945, 2375
BanI GGYRCC 2 cut(s) 1940, 2372
BauI CACGAG 1 cut(s) 2550
BbsI GAAGAC 2 cut(s) 1550, 2567
Bbv12I GWGCWC 1 cut(s) 2284
BbvCI CCTCAGC 1 cut(s) 1488
BbvI GCAGC 7 cut(s) 571, 700, 1184, 1555, 1597, 2254, 2467
BccI CCATC 6 cut(s) 235, 498, 1736, 2105, 2281, 2482
BceAI ACGGC 1 cut(s) 2335
BcgI CGANNNNNNTGC 2 cut(s) 413, 447
BciT130I CCWGG 2 cut(s) 1793, 1837
BcoDI GTCTC 3 cut(s) 635, 671, 2532
BfaI CTAG 7 cut(s) 131, 194, 992, 1073, 1542, 1572, 2145
BfmI CTRYAG 2 cut(s) 1908, 2244
BfrI CTTAAG 1 cut(s) 182
BfuAI ACCTGC 1 cut(s) 109
BisI GCNGC 7 cut(s) 585, 714, 1173, 1569, 1611, 2268, 2481
BlnI CCTAGG 1 cut(s) 1541
BlpI GCTNAGC 1 cut(s) 231
BlsI GCNGC 7 cut(s) 586, 715, 1174, 1570, 1612, 2269, 2482
BmcAI AGTACT 2 cut(s) 1654, 2000
Bme1390I CCNGG 2 cut(s) 1793, 1837
Bme18I GGWCC 2 cut(s) 1255, 1839
BmeRI GACNNNNNGTC 1 cut(s) 1335
BmgT120I GGNCC 2 cut(s) 1255, 1839
BmiI GGNNCC 2 cut(s) 1942, 2374
BmrFI CCNGG 2 cut(s) 1793, 1837
BmrI ACTGGG 1 cut(s) 1968
BmsI GCATC 6 cut(s) 31, 996, 1429, 2247, 2349, 2385
BmtI GCTAGC 1 cut(s) 134
BmuI ACTGGG 1 cut(s) 1968
BpiI GAAGAC 2 cut(s) 1550, 2567
BplI GAGNNNNNCTC 4 cut(s) 503, 535, 1668, 1700
BpmI CTGGAG 2 cut(s) 871, 1775
Bpu10I CCTNAGC 2 cut(s) 384, 1488
Bpu1102I GCTNAGC 1 cut(s) 231
BpuEI CTTGAG 1 cut(s) 2315
BsaHI GRCGYC 1 cut(s) 1604
BsaI GGTCTC 1 cut(s) 2532
BsaJI CCNNGG 3 cut(s) 453, 609, 1541
BsaWI WCCGGW 2 cut(s) 925, 2160
Bsc4I CCNNNNNNNGG 2 cut(s) 166, 1370
Bse118I RCCGGY 1 cut(s) 2160
Bse1I ACTGG 5 cut(s) 149, 1027, 1257, 1963, 2569
Bse3DI GCAATG 1 cut(s) 242
BseBI CCWGG 2 cut(s) 1793, 1837
BseDI CCNNGG 3 cut(s) 453, 609, 1541
BseGI GGATG 6 cut(s) 246, 490, 820, 1444, 1594, 2497
BseLI CCNNNNNNNGG 2 cut(s) 166, 1370
BseMI GCAATG 1 cut(s) 242
BseMII CTCAG 9 cut(s) 26, 65, 245, 375, 549, 635, 1479, 1956, 2297
BseNI ACTGG 5 cut(s) 149, 1027, 1257, 1963, 2569
BseRI GAGGAG 1 cut(s) 930
BseSI GKGCMC 2 cut(s) 1945, 2375
BseXI GCAGC 7 cut(s) 571, 700, 1184, 1555, 1597, 2254, 2467
BseYI CCCAGC 1 cut(s) 2406
BsgI GTGCAG 2 cut(s) 1599, 1839
Bsh1236I CGCG 1 cut(s) 423
Bsh1285I CGRYCG 2 cut(s) 1339, 2161
BshFI GGCC 1 cut(s) 382
BshNI GGYRCC 2 cut(s) 1940, 2372
BshTI ACCGGT 1 cut(s) 2160
BsiEI CGRYCG 2 cut(s) 1339, 2161
BsiHKAI GWGCWC 1 cut(s) 2284
BsiSI CCGG 2 cut(s) 926, 2161
BslFI GGGAC 3 cut(s) 142, 778, 929
BslI CCNNNNNNNGG 2 cut(s) 166, 1370
BsmAI GTCTC 3 cut(s) 635, 671, 2532
BsmBI CGTCTC 1 cut(s) 635
BsmFI GGGAC 3 cut(s) 142, 778, 929
BsmI GAATGC 1 cut(s) 1515
BsnI GGCC 1 cut(s) 382
Bso31I GGTCTC 1 cut(s) 2532
Bsp1286I GDGCHC 3 cut(s) 1945, 2284, 2375
Bsp143I GATC 6 cut(s) 6, 496, 669, 1222, 1545, 2388
Bsp1720I GCTNAGC 1 cut(s) 231
BspACI CCGC 2 cut(s) 803, 2270
BspANI GGCC 1 cut(s) 382
BspCNI CTCAG 9 cut(s) 25, 66, 244, 376, 550, 634, 1480, 1957, 2296
BspFNI CGCG 1 cut(s) 423
BspHI TCATGA 2 cut(s) 660, 2391
BspLI GGNNCC 2 cut(s) 1942, 2374
BspMAI CTGCAG 1 cut(s) 2248
BspMI ACCTGC 1 cut(s) 109
BspOI GCTAGC 1 cut(s) 134
BspPI GGATC 2 cut(s) 1230, 1553
BspQI GCTCTTC 1 cut(s) 1421
BspT107I GGYRCC 2 cut(s) 1940, 2372
BspTI CTTAAG 1 cut(s) 182
BspTNI GGTCTC 1 cut(s) 2532
BsrDI GCAATG 1 cut(s) 242
BsrFI RCCGGY 1 cut(s) 2160
BsrI ACTGG 5 cut(s) 149, 1027, 1257, 1963, 2569
BssAI RCCGGY 1 cut(s) 2160
BssECI CCNNGG 3 cut(s) 453, 609, 1541
BssMI GATC 6 cut(s) 6, 496, 669, 1222, 1545, 2388
BssNAI GTATAC 1 cut(s) 2363
BssNI GRCGYC 1 cut(s) 1604
BssSI CACGAG 1 cut(s) 2550
BssT1I CCWWGG 3 cut(s) 453, 609, 1541
Bst1107I GTATAC 1 cut(s) 2363
Bst2BI CACGAG 1 cut(s) 2550
Bst2UI CCWGG 2 cut(s) 1793, 1837
Bst4CI ACNGT 8 cut(s) 378, 447, 566, 911, 1093, 1247, 1912, 2053
Bst6I CTCTTC 2 cut(s) 1421, 2000
BstACI GRCGYC 1 cut(s) 1604
BstAFI CTTAAG 1 cut(s) 182
BstAPI GCANNNNNTGC 2 cut(s) 1181, 1190
BstC8I GCNNGC 7 cut(s) 132, 281, 711, 777, 1758, 1770, 1932
BstF5I GGATG 6 cut(s) 246, 490, 820, 1444, 1594, 2497
BstFNI CGCG 1 cut(s) 423
BstHHI GCGC 2 cut(s) 324, 423
BstKTI GATC 6 cut(s) 9, 499, 672, 1225, 1548, 2391
BstMAI GTCTC 3 cut(s) 635, 671, 2532
BstMBI GATC 6 cut(s) 6, 496, 669, 1222, 1545, 2388
BstMCI CGRYCG 2 cut(s) 1339, 2161
BstNI CCWGG 2 cut(s) 1793, 1837
BstNSI RCATGY 1 cut(s) 775
BstSCI CCNGG 2 cut(s) 1791, 1835
BstSFI CTRYAG 2 cut(s) 1908, 2244
BstSLI GKGCMC 2 cut(s) 1945, 2375
BstUI CGCG 1 cut(s) 423
BstV1I GCAGC 7 cut(s) 571, 700, 1184, 1555, 1597, 2254, 2467
BstV2I GAAGAC 2 cut(s) 1550, 2567
BstX2I RGATCY 1 cut(s) 1222
BstXI CCANNNNNNTGG 1 cut(s) 1094
BstYI RGATCY 1 cut(s) 1222
BstZ17I GTATAC 1 cut(s) 2363
BsuRI GGCC 1 cut(s) 382
BtsCI GGATG 6 cut(s) 246, 490, 820, 1444, 1594, 2497
BtsI GCAGTG 2 cut(s) 1822, 2253
BtsIMutI CAGTG 4 cut(s) 383, 1822, 1917, 2253
BveI ACCTGC 1 cut(s) 109
Cac8I GCNNGC 7 cut(s) 132, 281, 711, 777, 1758, 1770, 1932
CaiI CAGNNNCTG 1 cut(s) 909
CciI TCATGA 2 cut(s) 660, 2391
CfoI GCGC 2 cut(s) 324, 423
Cfr10I RCCGGY 1 cut(s) 2160
Cfr13I GGNCC 2 cut(s) 1255, 1839
CseI GACGC 1 cut(s) 1712
CsiI ACCWGGT 1 cut(s) 1835
CspAI ACCGGT 1 cut(s) 2160
CviAII CATG 8 cut(s) 412, 661, 772, 1326, 1916, 1927, 1952, 2392
DpnI GATC 6 cut(s) 8, 498, 671, 1224, 1547, 2390
DpnII GATC 6 cut(s) 6, 496, 669, 1222, 1545, 2388
DraI TTTAAA 1 cut(s) 262
DraIII CACNNNGTG 1 cut(s) 1190
DrdI GACNNNNNNGTC 3 cut(s) 298, 685, 2165
DriI GACNNNNNGTC 1 cut(s) 1335
DseDI GACNNNNNNGTC 3 cut(s) 298, 685, 2165
Eam1104I CTCTTC 2 cut(s) 1421, 2000
Eam1105I GACNNNNNGTC 1 cut(s) 1335
EarI CTCTTC 2 cut(s) 1421, 2000
Eco130I CCWWGG 3 cut(s) 453, 609, 1541
Eco31I GGTCTC 1 cut(s) 2532
Eco32I GATATC 1 cut(s) 2458
Eco47I GGWCC 2 cut(s) 1255, 1839
Eco57I CTGAAG 4 cut(s) 78, 485, 591, 1677
EcoRII CCWGG 2 cut(s) 1791, 1835
EcoRV GATATC 1 cut(s) 2458
EcoT14I CCWWGG 3 cut(s) 453, 609, 1541
ErhI CCWWGG 3 cut(s) 453, 609, 1541
Esp3I CGTCTC 1 cut(s) 635
FaeI CATG 8 cut(s) 415, 664, 775, 1329, 1919, 1930, 1955, 2395
FalI AAGNNNNNCTT 8 cut(s) 564, 596, 1914, 1946, 2458, 2490, 2516, 2548
FaqI GGGAC 3 cut(s) 142, 778, 929
FatI CATG 8 cut(s) 411, 660, 771, 1325, 1915, 1926, 1951, 2391
FauNDI CATATG 2 cut(s) 1615, 2401
FblI GTMKAC 1 cut(s) 2362
Fnu4HI GCNGC 7 cut(s) 585, 714, 1173, 1569, 1611, 2268, 2481
FokI GGATG 6 cut(s) 253, 477, 827, 1451, 1601, 2504
Fsp4HI GCNGC 7 cut(s) 585, 714, 1173, 1569, 1611, 2268, 2481
FspBI CTAG 7 cut(s) 131, 194, 992, 1073, 1542, 1572, 2145
GlaI GCGC 2 cut(s) 323, 422
GluI GCNGC 7 cut(s) 585, 714, 1173, 1569, 1611, 2268, 2481
GsaI CCCAGC 1 cut(s) 2410
GsuI CTGGAG 2 cut(s) 871, 1775
HaeIII GGCC 1 cut(s) 382
HapII CCGG 2 cut(s) 926, 2161
HgaI GACGC 1 cut(s) 1712
HhaI GCGC 2 cut(s) 324, 423
Hin1I GRCGYC 1 cut(s) 1604
Hin1II CATG 8 cut(s) 415, 664, 775, 1329, 1919, 1930, 1955, 2395
Hin6I GCGC 2 cut(s) 322, 421
HinP1I GCGC 2 cut(s) 322, 421
HincII GTYRAC 4 cut(s) 450, 1851, 2133, 2239
HindII GTYRAC 4 cut(s) 450, 1851, 2133, 2239
HindIII AAGCTT 2 cut(s) 2349, 2472
HpaII CCGG 2 cut(s) 926, 2161
HphI GGTGA 1 cut(s) 1435
Hpy166II GTNNAC 8 cut(s) 450, 517, 1250, 1262, 1851, 2133, 2239, 2363
Hpy8I GTNNAC 8 cut(s) 450, 517, 1250, 1262, 1851, 2133, 2239, 2363
HpyAV CCTTC 7 cut(s) 119, 156, 842, 1196, 1991, 2434, 2471
HpyCH4III ACNGT 8 cut(s) 378, 447, 566, 911, 1093, 1247, 1912, 2053
HpyCH4IV ACGT 2 cut(s) 949, 1604
HpySE526I ACGT 2 cut(s) 949, 1604
Hsp92I GRCGYC 1 cut(s) 1604
Hsp92II CATG 8 cut(s) 415, 664, 775, 1329, 1919, 1930, 1955, 2395
HspAI GCGC 2 cut(s) 322, 421
Kzo9I GATC 6 cut(s) 6, 496, 669, 1222, 1545, 2388
LguI GCTCTTC 1 cut(s) 1421
LmnI GCTCC 2 cut(s) 1447, 2272
Lsp1109I GCAGC 7 cut(s) 571, 700, 1184, 1555, 1597, 2254, 2467
LweI GCATC 6 cut(s) 31, 996, 1429, 2247, 2349, 2385
MabI ACCWGGT 1 cut(s) 1835
MaeI CTAG 7 cut(s) 131, 194, 992, 1073, 1542, 1572, 2145
MaeII ACGT 2 cut(s) 949, 1604
MaeIII GTNAC 2 cut(s) 2047, 2554
MalI GATC 6 cut(s) 8, 498, 671, 1224, 1547, 2390
MboI GATC 6 cut(s) 6, 496, 669, 1222, 1545, 2388
MboII GAAGA 8 cut(s) 491, 676, 1025, 1391, 1438, 1550, 2017, 2567
MfeI CAATTG 2 cut(s) 735, 840
MflI RGATCY 1 cut(s) 1222
MhlI GDGCHC 3 cut(s) 1945, 2284, 2375
MlyI GAGTC 6 cut(s) 164, 911, 1324, 1717, 2234, 2285
MroXI GAANNNNTTC 2 cut(s) 1557, 2223
MseI TTAA 8 cut(s) 183, 261, 405, 1238, 1286, 1434, 1625, 1884
MslI CAYNNNNRTG 1 cut(s) 665
MspA1I CMGCKG 2 cut(s) 533, 899
MspCI CTTAAG 1 cut(s) 182
MspI CCGG 2 cut(s) 926, 2161
MspR9I CCNGG 2 cut(s) 1793, 1837
MunI CAATTG 2 cut(s) 735, 840
Mva1269I GAATGC 1 cut(s) 1515
MvaI CCWGG 2 cut(s) 1793, 1837
MvnI CGCG 1 cut(s) 423
NdeI CATATG 2 cut(s) 1615, 2401
NdeII GATC 6 cut(s) 6, 496, 669, 1222, 1545, 2388
NheI GCTAGC 1 cut(s) 130
NlaIII CATG 8 cut(s) 415, 664, 775, 1329, 1919, 1930, 1955, 2395
NlaIV GGNNCC 2 cut(s) 1942, 2374
NmuCI GTSAC 1 cut(s) 2047
NspI RCATGY 1 cut(s) 775
PagI TCATGA 2 cut(s) 660, 2391
PciSI GCTCTTC 1 cut(s) 1421
PctI GAATGC 1 cut(s) 1515
PdmI GAANNNNTTC 2 cut(s) 1557, 2223
PfeI GAWTC 7 cut(s) 65, 206, 415, 550, 1120, 1619, 2137
PinAI ACCGGT 1 cut(s) 2160
PkrI GCNGC 7 cut(s) 586, 715, 1174, 1570, 1612, 2269, 2482
PleI GAGTC 6 cut(s) 163, 911, 1324, 1716, 2234, 2285
PpsI GAGTC 6 cut(s) 163, 911, 1324, 1716, 2234, 2285
PsiI TTATAA 2 cut(s) 1673, 1799
Psp6I CCWGG 2 cut(s) 1791, 1835
PspFI CCCAGC 1 cut(s) 2406
PspGI CCWGG 2 cut(s) 1791, 1835
PspN4I GGNNCC 2 cut(s) 1942, 2374
PspPI GGNCC 2 cut(s) 1255, 1839
PsrI GAACNNNNNNTAC 2 cut(s) 507, 539
PstI CTGCAG 1 cut(s) 2248
PstNI CAGNNNCTG 1 cut(s) 909
PsuI RGATCY 1 cut(s) 1222
PvuII CAGCTG 2 cut(s) 533, 899
RseI CAYNNNNRTG 1 cut(s) 665
SapI GCTCTTC 1 cut(s) 1421
SaqAI TTAA 8 cut(s) 183, 261, 405, 1238, 1286, 1434, 1625, 1884
SatI GCNGC 7 cut(s) 585, 714, 1173, 1569, 1611, 2268, 2481
Sau3AI GATC 6 cut(s) 6, 496, 669, 1222, 1545, 2388
Sau96I GGNCC 2 cut(s) 1255, 1839
ScaI AGTACT 2 cut(s) 1654, 2000
SchI GAGTC 6 cut(s) 164, 911, 1324, 1717, 2234, 2285
ScrFI CCNGG 2 cut(s) 1793, 1837
SduI GDGCHC 3 cut(s) 1945, 2284, 2375
SexAI ACCWGGT 1 cut(s) 1835
SfaNI GCATC 6 cut(s) 31, 996, 1429, 2247, 2349, 2385
SfcI CTRYAG 2 cut(s) 1908, 2244
SinI GGWCC 2 cut(s) 1255, 1839
SmiI ATTTAAAT 1 cut(s) 262
SmiMI CAYNNNNRTG 1 cut(s) 665
SmlI CTYRAG 2 cut(s) 182, 2330
SmoI CTYRAG 2 cut(s) 182, 2330
SsiI CCGC 2 cut(s) 803, 2270
SspI AATATT 1 cut(s) 987
SspMI CTAG 7 cut(s) 131, 194, 992, 1073, 1542, 1572, 2145
StyD4I CCNGG 2 cut(s) 1791, 1835
StyI CCWWGG 3 cut(s) 453, 609, 1541
SwaI ATTTAAAT 1 cut(s) 262
TaaI ACNGT 8 cut(s) 378, 447, 566, 911, 1093, 1247, 1912, 2053
TaiI ACGT 2 cut(s) 952, 1607
TaqI TCGA 3 cut(s) 967, 1803, 2157
TaqII GACCGA 1 cut(s) 1325
TatI WGTACW 4 cut(s) 747, 1652, 1998, 2088
TfiI GAWTC 7 cut(s) 65, 206, 415, 550, 1120, 1619, 2137
Tru1I TTAA 8 cut(s) 183, 261, 405, 1238, 1286, 1434, 1625, 1884
Tru9I TTAA 8 cut(s) 183, 261, 405, 1238, 1286, 1434, 1625, 1884
TscAI CASTG 4 cut(s) 383, 1822, 1917, 2253
TseFI GTSAC 1 cut(s) 2047
TseI GCWGC 7 cut(s) 584, 713, 1172, 1568, 1610, 2267, 2480
Tsp45I GTSAC 1 cut(s) 2047
TspDTI ATGAA 7 cut(s) 156, 563, 677, 1304, 1311, 1632, 2232
TspGWI ACGGA 3 cut(s) 566, 659, 1247
TspRI CASTG 4 cut(s) 383, 1822, 1917, 2253
Vha464I CTTAAG 1 cut(s) 182
VpaK11BI GGWCC 2 cut(s) 1255, 1839
XapI RAATTY 5 cut(s) 80, 969, 1349, 2020, 2124
XceI RCATGY 1 cut(s) 775
XmaJI CCTAGG 1 cut(s) 1541
XmiI GTMKAC 1 cut(s) 2362
XmnI GAANNNNTTC 2 cut(s) 1557, 2223
XspI CTAG 7 cut(s) 131, 194, 992, 1073, 1542, 1572, 2145
ZraI GACGTC 1 cut(s) 1605
ZrmI AGTACT 2 cut(s) 1654, 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.