Rmu_sc0007627.1_g000010

HEAT-like repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007627.1
OG0003507
Physical Location & Seq
Reverse (-)
26289 .. 32873
6585 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007627.1_g000010.1.cds

Sequence Viewer

Length: 2868 bp
atggcttctcttaaactcttgttttctcttgttgttctcacttccgtgctctccattctagcatcttatcctccttttgaagataacggcgtcaatgtccttgaatccaagaaagttaacctctctctgtattatgaaactctatgcccatcctgtgcgagcttcattgtaaatgaactagcagctaagttattcgatcccgaaggggatctcataagcattgtcaacctcagctggctagttccatatggaaatgctcagcttatacttcaaaatgctaaagaaacagaccaccttgttccgcctcatgagtacgtaccatgggtggttgttaatggacaactgctaaaggatagcaagtccatcggaggtcatagtcatagtcatagtcaagaaaaatctgatgtggtgactgctggtattgttcttaagaacttactagatgccaaagattctattacgaagaaacatcttgctcagcaatggatggatattgatattgcatttaaatcccaaatcaagagctgcctcttacagacacttgggtcatctgtggcagaggcaaggcacacctctgcccaagttcttgccaaagttgcttctattgatgttccccggaaacagtggcctgagctaattggacatttgcttaataacatgattcagcgcgatagctctgccggtttgaaacagtcaaccttggaaactcttggttatgtatgtgaggaaatatcccatcctgatcttcagcaagacaaggtaaactctgttcttacagctgtaattcaaggaatgaatcttgagaacagttctgaagtccgtcttgctgcaacaagggcattatgtaatgccttggagtttgctcagacaaactttgaaaatgagatggaacgaacttacatcatgaagatgatctgtgagactgccttatctaaggaggtagaggttaggcaggctgcttttgagtgccttgcctcaattgcttctacatactattctgtgcttgggacttacatgcaggctctctttgagcttacatcaaatgcggtaaaaggggatgtagaacctgttgcccttcaagcaattgagttctggagttccatttgtgaaaaagaaacagaattgcaaaagtatgagacagctgacaggaactgttgggactctttaccggactttgtgcctcctcattcacgttttatagaaaaatctcgaatttctctaattccaatagtgctagagactttgctaatgcaggaagaaaatgtaagccaggatgacaacatttggaatatctcaatggctgggaagaaatgcctagaacttgttgcccaaactgttgggtttgtcattgtaccgcttgtgattccatttgtggtggctaacagagtgaaaccagattggcattgtcgggaggcagcagtttttgcacttggtgcaattattgaaggctcaaccatctaccaggatcttggggtcttattaaaatactgtgaactggtccgtgaacttatagatgacttgcttttcttaatgaatgatgaaaacaaccaagtcaaagaaactactgcatggactctcggtcgtatatttgaatttttgcatagtcctgttggtggattttctgtgattacttccgataatcttccaatagtggtagatatattggtgaagagcgttagtgatgctccaaatgttgcaactaaggtgtgtcgggcgatttatacacttgctgagggctatgaggaagctggaatgcattcatctttttttatgccatatatccctaggatcattgaaagtcttctttttgctgctagtcgtgcagatgtggatgattcgaaattgaggtctgctgcatatgaatcattaaacgaggtagtgaagtgttccagcagtaccgaaacaccacagattataagagaattactctctgtgattttggagaggttgggtcagactttagagcttcagattgtatcatcagatggcaaggaaaagcaagcagacttgcaggcttctctttgtggagttctccaggttataatcgagaaagtttgcagtgccgatgatttagaaaccaggtccattatgttgacacaggcagaccagataatgtttttgtttcttaatgtcttttcttgccgaagttctacagtgcatgaggaagccatgcttgctattggtgcccttgctcatgctaccgggtctgagtttggcaagtaccttcctgaattatacaagtacttgaagagggggttgcaaaatttcaaggactatcaagcctgttctgtcacagttggtgtggttggcgacattgctcgtgccttgaagtacaaggtagtaccatattgtgatgggattatgcaaattctgttgacgaatctttctagtgaagcactcgaccggtctgtcaagcctcccatattctctgtcattggcgacatagctctctcaatagatgaaacctttcagaagtatgttgactctgcagtgccaatgatgcagagagctgcggagctgtgtgctcagatggactccaatgatgatgagttattggagtacggcagtcagctcaagtgtagcatctttgaagcttattctggtatacttcggggcaccaagaagtctaagatcatgatgccatatgcccagcttctctacgagtttataggatttgttttgaaggagaaagacaggtatcatgttccgattggatgggatatgcttctaagaaaagctttagctgctgtgatggatgaccttgcagatttacttggtacaaacacaaagacactctttggagaccttactgctcgtgtaacatatactggtgcgtgtcttcaatctgatggtgataacctgaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000060 GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000819 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0008092 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009987 GO:0010494 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019894 GO:0019899 GO:0019904 GO:0022402 GO:0022607 GO:0023052 GO:0030953 GO:0031072 GO:0031090 GO:0031122 GO:0031291 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0035556 GO:0035770 GO:0036464 GO:0040001 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0046907 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051225 GO:0051234 GO:0051276 GO:0051293 GO:0051303 GO:0051305 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051653 GO:0051656 GO:0051716 GO:0051879 GO:0065007 GO:0070013 GO:0070727 GO:0070925 GO:0071702 GO:0071705 GO:0071782 GO:0071840 GO:0072594 GO:0090307 GO:0097435 GO:0098813 GO:0098827 GO:0140014 GO:1902850 GO:1903047 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
HEAT HEAT_EZ IBN_N

Protein Analysis

955

Amino Acids

105.92

Weight (kDa)

4.92

Isoelectric Point (pI)

36.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1916, 2042
AasI GACNNNNNNGTC 2 cut(s) 544, 2408
AccB1I GGYRCC 2 cut(s) 2183, 2615
AccI GTMKAC 1 cut(s) 2605
AccII CGCG 1 cut(s) 669
AciI CCGC 4 cut(s) 302, 1046, 1355, 2513
AclWI GGATC 4 cut(s) 191, 216, 1473, 1796
AcsI RAATTY 4 cut(s) 1212, 1592, 2263, 2367
AcuI CTGAAG 3 cut(s) 731, 834, 1952
AcyI GRCGYC 1 cut(s) 90
AdeI CACNNNGTG 1 cut(s) 1433
AfiI CCNNNNNNNGG 1 cut(s) 1613
AflII CTTAAG 1 cut(s) 428
AgeI ACCGGT 1 cut(s) 2403
AhdI GACNNNNNGTC 1 cut(s) 1578
AjnI CCWGG 4 cut(s) 1269, 1461, 2034, 2078
AleI CACNNNNGTG 1 cut(s) 44
Alw21I GWGCWC 2 cut(s) 51, 2527
Alw26I GTCTC 4 cut(s) 914, 1130, 1232, 2796
AlwI GGATC 4 cut(s) 191, 216, 1473, 1796
AlwNI CAGNNNCTG 1 cut(s) 1152
AoxI GGCC 1 cut(s) 626
ApeKI GCWGC 9 cut(s) 182, 525, 827, 956, 1415, 1811, 1853, 2510, 2744
ApoI RAATTY 4 cut(s) 1212, 1592, 2263, 2367
ArsI GACNNNNNNTTYG 2 cut(s) 1832, 1864
AsiGI ACCGGT 1 cut(s) 2403
Asp700I GAANNNNTTC 3 cut(s) 1756, 1800, 2466
AspA2I CCTAGG 1 cut(s) 1784
AspLEI GCGC 1 cut(s) 669
AspS9I GGNCC 2 cut(s) 1498, 2082
AsuC2I CCSGG 2 cut(s) 616, 2203
AsuHPI GGTGA 3 cut(s) 421, 1678, 2864
AsuII TTCGAA 1 cut(s) 1838
AvaII GGWCC 2 cut(s) 1498, 2082
AvrII CCTAGG 1 cut(s) 1784
BaeGI GKGCMC 2 cut(s) 2188, 2618
BanI GGYRCC 2 cut(s) 2183, 2615
BauI CACGAG 2 cut(s) 2319, 2814
BbsI GAAGAC 2 cut(s) 1793, 2831
Bbv12I GWGCWC 2 cut(s) 51, 2527
BbvCI CCTCAGC 2 cut(s) 230, 1731
BbvI GCAGC 9 cut(s) 194, 512, 814, 943, 1427, 1798, 1840, 2497, 2731
BceAI ACGGC 2 cut(s) 103, 2578
BcgI CGANNNNNNTGC 4 cut(s) 346, 380, 659, 693
BciT130I CCWGG 4 cut(s) 1271, 1463, 2036, 2080
BcnI CCSGG 2 cut(s) 616, 2203
BcoDI GTCTC 4 cut(s) 914, 1130, 1232, 2796
BfaI CTAG 9 cut(s) 59, 179, 239, 440, 1235, 1316, 1785, 1815, 2388
BfmI CTRYAG 2 cut(s) 2151, 2487
BfrI CTTAAG 1 cut(s) 428
BisI GCNGC 9 cut(s) 183, 526, 828, 957, 1416, 1812, 1854, 2511, 2745
BlnI CCTAGG 1 cut(s) 1784
BlpI GCTNAGC 2 cut(s) 258, 477
BlsI GCNGC 9 cut(s) 184, 527, 829, 958, 1417, 1813, 1855, 2512, 2746
BmcAI AGTACT 1 cut(s) 2243
Bme1390I CCNGG 6 cut(s) 616, 1271, 1463, 2036, 2080, 2203
Bme18I GGWCC 2 cut(s) 1498, 2082
BmeRI GACNNNNNGTC 1 cut(s) 1578
BmgT120I GGNCC 2 cut(s) 1498, 2082
BmiI GGNNCC 2 cut(s) 2185, 2617
BmrFI CCNGG 6 cut(s) 616, 1271, 1463, 2036, 2080, 2203
BmsI GCATC 6 cut(s) 71, 433, 1672, 2490, 2592, 2628
BpiI GAAGAC 2 cut(s) 1793, 2831
BplI GAGNNNNNCTC 2 cut(s) 1911, 1943
BpmI CTGGAG 2 cut(s) 1114, 2018
Bpu10I CCTNAGC 3 cut(s) 230, 630, 1731
Bpu1102I GCTNAGC 2 cut(s) 258, 477
Bpu14I TTCGAA 1 cut(s) 1838
BpuEI CTTGAG 2 cut(s) 821, 2558
BpuMI CCSGG 2 cut(s) 616, 2203
BsaAI YACGTR 1 cut(s) 316
BsaHI GRCGYC 1 cut(s) 90
BsaI GGTCTC 1 cut(s) 2796
BsaJI CCNNGG 5 cut(s) 320, 614, 699, 852, 1784
BsaWI WCCGGW 2 cut(s) 1168, 2403
Bsc4I CCNNNNNNNGG 1 cut(s) 1613
Bse118I RCCGGY 2 cut(s) 680, 2403
Bse1I ACTGG 2 cut(s) 1500, 2833
Bse3DI GCAATG 2 cut(s) 488, 2313
BseBI CCWGG 4 cut(s) 1271, 1463, 2036, 2080
BseDI CCNNGG 5 cut(s) 320, 614, 699, 852, 1784
BseGI GGATG 8 cut(s) 149, 492, 736, 1063, 1279, 1837, 2720, 2761
BseLI CCNNNNNNNGG 1 cut(s) 1613
BseMI GCAATG 2 cut(s) 488, 2313
BseMII CTCAG 8 cut(s) 244, 272, 491, 621, 878, 1722, 2199, 2540
BseNI ACTGG 2 cut(s) 1500, 2833
BseRI GAGGAG 1 cut(s) 1173
BseSI GKGCMC 2 cut(s) 2188, 2618
BseXI GCAGC 9 cut(s) 194, 512, 814, 943, 1427, 1798, 1840, 2497, 2731
BseYI CCCAGC 2 cut(s) 1301, 2649
BsgI GTGCAG 1 cut(s) 1842
Bsh1236I CGCG 1 cut(s) 669
Bsh1285I CGRYCG 2 cut(s) 1582, 2404
BshFI GGCC 1 cut(s) 628
BshNI GGYRCC 2 cut(s) 2183, 2615
BshTI ACCGGT 1 cut(s) 2403
BsiEI CGRYCG 2 cut(s) 1582, 2404
BsiHKAI GWGCWC 2 cut(s) 51, 2527
BsiSI CCGG 5 cut(s) 616, 681, 1169, 2202, 2404
BslFI GGGAC 2 cut(s) 1021, 1172
BslI CCNNNNNNNGG 1 cut(s) 1613
BsmAI GTCTC 4 cut(s) 914, 1130, 1232, 2796
BsmFI GGGAC 2 cut(s) 1021, 1172
BsmI GAATGC 2 cut(s) 1756, 1758
BsnI GGCC 1 cut(s) 628
Bso31I GGTCTC 1 cut(s) 2796
Bsp119I TTCGAA 1 cut(s) 1838
Bsp1286I GDGCHC 4 cut(s) 51, 2188, 2527, 2618
Bsp143I GATC 7 cut(s) 196, 208, 742, 912, 1465, 1788, 2631
Bsp1720I GCTNAGC 2 cut(s) 258, 477
Bsp19I CCATGG 1 cut(s) 320
BspACI CCGC 4 cut(s) 302, 1046, 1355, 2513
BspANI GGCC 1 cut(s) 628
BspCNI CTCAG 8 cut(s) 243, 271, 490, 622, 877, 1723, 2200, 2539
BspFNI CGCG 1 cut(s) 669
BspHI TCATGA 3 cut(s) 307, 903, 2634
BspLI GGNNCC 2 cut(s) 2185, 2617
BspMAI CTGCAG 1 cut(s) 2491
BspPI GGATC 4 cut(s) 191, 216, 1473, 1796
BspQI GCTCTTC 1 cut(s) 1664
BspT104I TTCGAA 1 cut(s) 1838
BspT107I GGYRCC 2 cut(s) 2183, 2615
BspTI CTTAAG 1 cut(s) 428
BspTNI GGTCTC 1 cut(s) 2796
BsrDI GCAATG 2 cut(s) 488, 2313
BsrFI RCCGGY 2 cut(s) 680, 2403
BsrI ACTGG 2 cut(s) 1500, 2833
BssAI RCCGGY 2 cut(s) 680, 2403
BssECI CCNNGG 5 cut(s) 320, 614, 699, 852, 1784
BssMI GATC 7 cut(s) 196, 208, 742, 912, 1465, 1788, 2631
BssNAI GTATAC 1 cut(s) 2606
BssNI GRCGYC 1 cut(s) 90
BssSI CACGAG 2 cut(s) 2319, 2814
BssT1I CCWWGG 4 cut(s) 320, 699, 852, 1784
Bst1107I GTATAC 1 cut(s) 2606
Bst2BI CACGAG 2 cut(s) 2319, 2814
Bst2UI CCWGG 4 cut(s) 1271, 1463, 2036, 2080
Bst4CI ACNGT 8 cut(s) 624, 693, 809, 1154, 1336, 1490, 2155, 2296
Bst6I CTCTTC 2 cut(s) 1664, 2243
BstACI GRCGYC 1 cut(s) 90
BstAFI CTTAAG 1 cut(s) 428
BstAPI GCANNNNNTGC 2 cut(s) 1424, 1433
BstBAI YACGTR 1 cut(s) 316
BstBI TTCGAA 1 cut(s) 1838
BstC8I GCNNGC 7 cut(s) 160, 236, 954, 1020, 2001, 2013, 2175
BstDSI CCRYGG 1 cut(s) 320
BstF5I GGATG 8 cut(s) 149, 492, 736, 1063, 1279, 1837, 2720, 2761
BstFNI CGCG 1 cut(s) 669
BstHHI GCGC 1 cut(s) 669
BstKTI GATC 7 cut(s) 199, 211, 745, 915, 1468, 1791, 2634
BstMAI GTCTC 4 cut(s) 914, 1130, 1232, 2796
BstMBI GATC 7 cut(s) 196, 208, 742, 912, 1465, 1788, 2631
BstMCI CGRYCG 2 cut(s) 1582, 2404
BstNI CCWGG 4 cut(s) 1271, 1463, 2036, 2080
BstNSI RCATGY 1 cut(s) 1018
BstSCI CCNGG 6 cut(s) 614, 1269, 1461, 2034, 2078, 2201
BstSFI CTRYAG 2 cut(s) 2151, 2487
BstSLI GKGCMC 2 cut(s) 2188, 2618
BstSNI TACGTA 1 cut(s) 316
BstUI CGCG 1 cut(s) 669
BstV1I GCAGC 9 cut(s) 194, 512, 814, 943, 1427, 1798, 1840, 2497, 2731
BstV2I GAAGAC 2 cut(s) 1793, 2831
BstX2I RGATCY 2 cut(s) 208, 1465
BstXI CCANNNNNNTGG 2 cut(s) 1337, 1469
BstYI RGATCY 2 cut(s) 208, 1465
BstZ17I GTATAC 1 cut(s) 2606
BsuRI GGCC 1 cut(s) 628
BtgI CCRYGG 1 cut(s) 320
BtsCI GGATG 8 cut(s) 149, 492, 736, 1063, 1279, 1837, 2720, 2761
BtsI GCAGTG 2 cut(s) 2065, 2496
BtsIMutI CAGTG 4 cut(s) 629, 2065, 2160, 2496
Cac8I GCNNGC 7 cut(s) 160, 236, 954, 1020, 2001, 2013, 2175
CaiI CAGNNNCTG 1 cut(s) 1152
CciI TCATGA 3 cut(s) 307, 903, 2634
CfoI GCGC 1 cut(s) 669
Cfr10I RCCGGY 2 cut(s) 680, 2403
Cfr13I GGNCC 2 cut(s) 1498, 2082
CseI GACGC 1 cut(s) 79
CsiI ACCWGGT 1 cut(s) 2078
CspAI ACCGGT 1 cut(s) 2403
DpnI GATC 7 cut(s) 198, 210, 744, 914, 1467, 1790, 2633
DpnII GATC 7 cut(s) 196, 208, 742, 912, 1465, 1788, 2631
DraI TTTAAA 1 cut(s) 508
DraIII CACNNNGTG 1 cut(s) 1433
DrdI GACNNNNNNGTC 2 cut(s) 544, 2408
DriI GACNNNNNGTC 1 cut(s) 1578
DseDI GACNNNNNNGTC 2 cut(s) 544, 2408
Eam1104I CTCTTC 2 cut(s) 1664, 2243
Eam1105I GACNNNNNGTC 1 cut(s) 1578
EarI CTCTTC 2 cut(s) 1664, 2243
EciI GGCGGA 1 cut(s) 291
Eco105I TACGTA 1 cut(s) 316
Eco130I CCWWGG 4 cut(s) 320, 699, 852, 1784
Eco31I GGTCTC 1 cut(s) 2796
Eco47I GGWCC 2 cut(s) 1498, 2082
Eco57I CTGAAG 3 cut(s) 731, 834, 1952
EcoRII CCWGG 4 cut(s) 1269, 1461, 2034, 2078
EcoT14I CCWWGG 4 cut(s) 320, 699, 852, 1784
EcoT22I ATGCAT 1 cut(s) 1758
ErhI CCWWGG 4 cut(s) 320, 699, 852, 1784
FalI AAGNNNNNCTT 8 cut(s) 807, 839, 2157, 2189, 2722, 2754, 2780, 2812
FaqI GGGAC 2 cut(s) 1021, 1172
FauNDI CATATG 3 cut(s) 247, 1858, 2644
FblI GTMKAC 1 cut(s) 2605
Fnu4HI GCNGC 9 cut(s) 183, 526, 828, 957, 1416, 1812, 1854, 2511, 2745
FokI GGATG 8 cut(s) 136, 499, 723, 1070, 1286, 1844, 2727, 2768
Fsp4HI GCNGC 9 cut(s) 183, 526, 828, 957, 1416, 1812, 1854, 2511, 2745
FspBI CTAG 9 cut(s) 59, 179, 239, 440, 1235, 1316, 1785, 1815, 2388
GlaI GCGC 1 cut(s) 668
GluI GCNGC 9 cut(s) 183, 526, 828, 957, 1416, 1812, 1854, 2511, 2745
GsaI CCCAGC 2 cut(s) 1305, 2653
GsuI CTGGAG 2 cut(s) 1114, 2018
HaeIII GGCC 1 cut(s) 628
HapII CCGG 5 cut(s) 616, 681, 1169, 2202, 2404
HgaI GACGC 1 cut(s) 79
HhaI GCGC 1 cut(s) 669
Hin1I GRCGYC 1 cut(s) 90
Hin6I GCGC 1 cut(s) 667
HinP1I GCGC 1 cut(s) 667
HincII GTYRAC 6 cut(s) 118, 226, 696, 2094, 2376, 2482
HindII GTYRAC 6 cut(s) 118, 226, 696, 2094, 2376, 2482
HindIII AAGCTT 2 cut(s) 2592, 2736
HpaI GTTAAC 1 cut(s) 118
HpaII CCGG 5 cut(s) 616, 681, 1169, 2202, 2404
HphI GGTGA 3 cut(s) 421, 1678, 2864
HpyAV CCTTC 5 cut(s) 197, 1085, 1439, 2234, 2677
HpyCH4III ACNGT 8 cut(s) 624, 693, 809, 1154, 1336, 1490, 2155, 2296
HpyCH4IV ACGT 2 cut(s) 315, 1192
HpySE526I ACGT 2 cut(s) 315, 1192
Hsp92I GRCGYC 1 cut(s) 90
HspAI GCGC 1 cut(s) 667
KspAI GTTAAC 1 cut(s) 118
Kzo9I GATC 7 cut(s) 196, 208, 742, 912, 1465, 1788, 2631
LguI GCTCTTC 1 cut(s) 1664
LmnI GCTCC 2 cut(s) 1690, 2515
Lsp1109I GCAGC 9 cut(s) 194, 512, 814, 943, 1427, 1798, 1840, 2497, 2731
LweI GCATC 6 cut(s) 71, 433, 1672, 2490, 2592, 2628
MabI ACCWGGT 1 cut(s) 2078
MaeI CTAG 9 cut(s) 59, 179, 239, 440, 1235, 1316, 1785, 1815, 2388
MaeII ACGT 2 cut(s) 315, 1192
MaeIII GTNAC 3 cut(s) 409, 2290, 2818
MalI GATC 7 cut(s) 198, 210, 744, 914, 1467, 1790, 2633
MboI GATC 7 cut(s) 196, 208, 742, 912, 1465, 1788, 2631
MfeI CAATTG 2 cut(s) 978, 1083
MflI RGATCY 2 cut(s) 208, 1465
MhlI GDGCHC 4 cut(s) 51, 2188, 2527, 2618
MlyI GAGTC 4 cut(s) 1154, 1567, 2477, 2528
Mph1103I ATGCAT 1 cut(s) 1758
MroXI GAANNNNTTC 3 cut(s) 1756, 1800, 2466
MslI CAYNNNNRTG 2 cut(s) 44, 908
MspA1I CMGCKG 3 cut(s) 234, 779, 1142
MspCI CTTAAG 1 cut(s) 428
MspI CCGG 5 cut(s) 616, 681, 1169, 2202, 2404
MspR9I CCNGG 6 cut(s) 616, 1271, 1463, 2036, 2080, 2203
MunI CAATTG 2 cut(s) 978, 1083
Mva1269I GAATGC 2 cut(s) 1756, 1758
MvaI CCWGG 4 cut(s) 1271, 1463, 2036, 2080
MvnI CGCG 1 cut(s) 669
NciI CCSGG 2 cut(s) 616, 2203
NcoI CCATGG 1 cut(s) 320
NdeI CATATG 3 cut(s) 247, 1858, 2644
NdeII GATC 7 cut(s) 196, 208, 742, 912, 1465, 1788, 2631
NlaIV GGNNCC 2 cut(s) 2185, 2617
NmuCI GTSAC 2 cut(s) 409, 2290
NsiI ATGCAT 1 cut(s) 1758
NspI RCATGY 1 cut(s) 1018
NspV TTCGAA 1 cut(s) 1838
OliI CACNNNNGTG 1 cut(s) 44
PagI TCATGA 3 cut(s) 307, 903, 2634
PciSI GCTCTTC 1 cut(s) 1664
PctI GAATGC 2 cut(s) 1756, 1758
PdmI GAANNNNTTC 3 cut(s) 1756, 1800, 2466
PfeI GAWTC 8 cut(s) 104, 452, 661, 796, 1363, 1835, 1862, 2380
PinAI ACCGGT 1 cut(s) 2403
PkrI GCNGC 9 cut(s) 184, 527, 829, 958, 1417, 1813, 1855, 2512, 2746
PleI GAGTC 4 cut(s) 1154, 1567, 2477, 2528
PpsI GAGTC 4 cut(s) 1154, 1567, 2477, 2528
Ppu21I YACGTR 1 cut(s) 316
PsiI TTATAA 2 cut(s) 1916, 2042
Psp6I CCWGG 4 cut(s) 1269, 1461, 2034, 2078
PspFI CCCAGC 2 cut(s) 1301, 2649
PspGI CCWGG 4 cut(s) 1269, 1461, 2034, 2078
PspN4I GGNNCC 2 cut(s) 2185, 2617
PspPI GGNCC 2 cut(s) 1498, 2082
PsrI GAACNNNNNNTAC 2 cut(s) 753, 785
PstI CTGCAG 1 cut(s) 2491
PstNI CAGNNNCTG 1 cut(s) 1152
PsuI RGATCY 2 cut(s) 208, 1465
PvuII CAGCTG 3 cut(s) 234, 779, 1142
RseI CAYNNNNRTG 2 cut(s) 44, 908
SapI GCTCTTC 1 cut(s) 1664
SatI GCNGC 9 cut(s) 183, 526, 828, 957, 1416, 1812, 1854, 2511, 2745
Sau3AI GATC 7 cut(s) 196, 208, 742, 912, 1465, 1788, 2631
Sau96I GGNCC 2 cut(s) 1498, 2082
ScaI AGTACT 1 cut(s) 2243
SchI GAGTC 4 cut(s) 1154, 1567, 2477, 2528
ScrFI CCNGG 6 cut(s) 616, 1271, 1463, 2036, 2080, 2203
SduI GDGCHC 4 cut(s) 51, 2188, 2527, 2618
SexAI ACCWGGT 1 cut(s) 2078
SfaNI GCATC 6 cut(s) 71, 433, 1672, 2490, 2592, 2628
SfcI CTRYAG 2 cut(s) 2151, 2487
SfuI TTCGAA 1 cut(s) 1838
SinI GGWCC 2 cut(s) 1498, 2082
SmiI ATTTAAAT 1 cut(s) 508
SmiMI CAYNNNNRTG 2 cut(s) 44, 908
SmlI CTYRAG 3 cut(s) 428, 800, 2573
SmoI CTYRAG 3 cut(s) 428, 800, 2573
SnaBI TACGTA 1 cut(s) 316
SsiI CCGC 4 cut(s) 302, 1046, 1355, 2513
SspMI CTAG 9 cut(s) 59, 179, 239, 440, 1235, 1316, 1785, 1815, 2388
StyD4I CCNGG 6 cut(s) 614, 1269, 1461, 2034, 2078, 2201
StyI CCWWGG 4 cut(s) 320, 699, 852, 1784
SwaI ATTTAAAT 1 cut(s) 508
TaaI ACNGT 8 cut(s) 624, 693, 809, 1154, 1336, 1490, 2155, 2296
TaiI ACGT 2 cut(s) 318, 1195
TaqI TCGA 5 cut(s) 195, 1210, 1838, 2046, 2400
TaqII GACCGA 1 cut(s) 1568
TatI WGTACW 2 cut(s) 2241, 2331
TfiI GAWTC 8 cut(s) 104, 452, 661, 796, 1363, 1835, 1862, 2380
TscAI CASTG 4 cut(s) 629, 2065, 2160, 2496
TseFI GTSAC 2 cut(s) 409, 2290
TseI GCWGC 9 cut(s) 182, 525, 827, 956, 1415, 1811, 1853, 2510, 2744
Tsp45I GTSAC 2 cut(s) 409, 2290
TspGWI ACGGA 3 cut(s) 34, 809, 1490
TspRI CASTG 4 cut(s) 629, 2065, 2160, 2496
Vha464I CTTAAG 1 cut(s) 428
VpaK11BI GGWCC 2 cut(s) 1498, 2082
XapI RAATTY 4 cut(s) 1212, 1592, 2263, 2367
XceI RCATGY 1 cut(s) 1018
XmaJI CCTAGG 1 cut(s) 1784
XmiI GTMKAC 1 cut(s) 2605
XmnI GAANNNNTTC 3 cut(s) 1756, 1800, 2466
XspI CTAG 9 cut(s) 59, 179, 239, 440, 1235, 1316, 1785, 1815, 2388
ZrmI AGTACT 1 cut(s) 2243
Zsp2I ATGCAT 1 cut(s) 1758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.