FvH4_6g14620

Protein of unknown function (DUF3741)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
8986337 .. 8991963
5627 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g14620.t2

Sequence Viewer

Length: 2712 bp
ATGTTGAGAGAAACTGAATCGAGAAGGAGATCACCAAGTGTTATCGCCAAATTGATGGGTCTTGATGGGATGCCGCCCCAACAGCCCATCGCTCATAAACAACAAAAAGGCATTCCAGAGAATCGTCACCAGAGGACAAGATCAGCAGAGAAAGAGCACAGAAGTGGCGTGTGTTATGACCACCGGTCATCTAGGAAGAACTCAAAGGAGCAGCAGGAATTTAAGGATGTGTTTGAAGTTTTGGAGACTTCCAAGGTGGAAAGTTGTAGTTACTCATCACGAGCAGCTGCTAACACCAAGCTCAGTGATGCAGAGATGGCCTTTGTTCGACAGAAGTTCATGGATGCTAAACGACTTTCAACTGATGAGAAGCTACAAGATTCAAAGGAATTCCACGATGCCCTTGAGGTGTTGGATTCTAACAAGGATCTTCTGTTGAAATTTCTTCAGCAACCAGACTCATTGTTCACAAAGCATCTGCATGATCTGCATAGCGGTCCCCAATCCCATTGTGGCCGAGTAGCATCAATGAAGTCATCAGAAGCTCAGAAGTATGAGAAAATTGACCTTGGCTGGACATCAGCAAGAGAAAGTCCCCTAAGGAATTACTGTAAATCTCCTCAGAGGCATCGTGATTCTTTTTCCAGCTACTCTGATAGTAGACATGCTACTCGTTATTCTCTCAAGTCACAATACAGACCAGAAGCAAAACATGAAACTGCCATTACTCCTACAAGGATAGTTGTTCTGAAGCCAAACCTTGGGAAAATTCTGAATGCTACCAAAACTATTTCATCACCTTGTTCTTCTCAAGCTTCTATGTCAGTTTGCAGGAACCGCTCAGATTTTCCTAACATTGGAAATAGGGAGGTCGATGCATGGGGAAAGAAAAATTTCCCAGATAATGAGGGGCAGTCAAGGCATAAGTCTAGAGAGTCTAGAGAAGTAGCCAAGGAAATCACAAGACAAATGAGAAAGAACATTAGCATGGGTTCTGTGCAAATTTCATCATCTGGATTTAAAGGGTATGCTGGCGATGATAGTTCTTGTAGCATGTCTGAGAATGAATCAGGAAATGAATCAGAGGTGATTTCAGTAGCTTCCAAACAATTCTCTGACAGACATAACCATTCCAGGCGCTCATCAACCTGCTCTGCTGAATCTTCTGTGAGTAGAGAGGCCAAGAAGAGACTCTCAGAGAGGTGGAAAATGACTCATAAGTCTCAGGAAATAGGAGTGGCCAGCAGGGGCAACACACTTGCTGAAATGCTTGCTATCCCAGACAAAGAAATGCAAGCCGCAAAACTGGATGCCATGAAAGGTGAGGCAGGATTCAGAGATAAATTTGCCAGGGAAGATGGACCTGTAGGGTGGGGTGGACCTCTTGGTATCAGCAGTAGGGATGGCTGGAAGGATGAATGCATCAAAAGTTTATCAAGATCAAAATCCCTCCCTGCTTCTTCTGGTGCTTTTGGGAGTTATAAGACAATGCGCCGGGAAACCATACGTGATAACAGGTATCTGATACCATCAGAGGTGTTGAAGCATAAAAGAAACCAATCAGTAGAAGTTGATTTTGATCATAGAGAAAGTGGGCGCATAAACTATAGATCCAGGAATAAAAGATCGTATAGTTCTCGCTCCTTAAGTAGGGAAAGTATGGACATTTCACCTGAAACTCCCAATACTCCTGACAGAGTAAGAACAGATCCTGTAGACAAGCAATCCCAGCAGAATATGGCTGTTGTTGAGTCATCATCTGGTAATGATATAGATGCTAGTCCAGCTTCTGTAAAGTTGGTGGATTTGGATGTATCAATTTCTTCTGAAACACTTGACGCATTCCCTCCGGAATTATCAGCTCGTATGTCGGTGGAAGGTGATTCCTGTAGCAGTCACCAAGTAATTGCAGAGGAATCATCAACTAAACCATCTGATGACAAGTCAGTACTGTTTGAGCACTCTGTACCGGGTATAGAATCTCTTGCAAGCTCTAAAGAGGCTGATCAGCCCAGTCCGGTTTCAGTTCTGGAAGTTCCTTTTAACGATGATGTTTCATCTTCTTCCGACTGCTTTGAGACTCTCAGCGCTGACCTGCAAGGGCTTCGGATGCAGCTTCAGCTACTCAAGTTGGAATCGGATTCATATGCAGAGGGATCCATGCTAATCTCAAGTGACGAGGATGCAGGAGAAGGATCCTCTTGGTTTCGGCATGCAGTATGTAGGGAAGAAGAGAGTTGGGAGTCTTCATACATGGCTGATATGTTAACAGAATCAGGTTTAAACAATGCCGACCATGAGACCTTCTTGGCTACATGGCACGCTACTGAGTGTCCAGTGAGTCCTCAACTATTCGAAGAGCTGGAGAAAAAGTACTGTGACAAGACTTCTTGTCCGAAATCTGAGAGAAAATTACTGTTCGACCGAATAAATTCAGGACTTCTGGAGATGTTTCAGCAATTCAGTGACCCTCACCCATGGGTTAGACCTATGAAGATAACAGTTGGCTCAAAGTGGATTAACAGAACTGCCCTCCAAGATGGTCTCCGTAAGTTGCTAGCTGGCGAAGAGAAGGCCAATGAGGAGAGTTTGGATAAACTGCTGGAAAGGGACTCGCTGTGGTTGCATTTCGGAGACTACATTGACATAATAGGTAGGGAAATAGAAAGGTCGGTGTTAGATGATTTAATTGCAGAAGTAGTGGTTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

904

Amino Acids

101.51

Weight (kDa)

6.26

Isoelectric Point (pI)

63.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VARLMGL PF14383 92 - 113 3.6e-07 DUF761-associated sequence motif
DUF3741 PF12552 195 - 239 2.1e-22 Protein of unknown function (DUF3741)
DUF4378 PF14309 834 - 984 1.4e-32 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1482
AasI GACNNNNNNGTC 1 cut(s) 1219
Acc36I ACCTGC 2 cut(s) 1157, 2103
AccB7I CCANNNNNTGG 1 cut(s) 761
AccBSI CCGCTC 1 cut(s) 840
AccI GTMKAC 2 cut(s) 661, 1716
AccIII TCCGGA 1 cut(s) 1849
AciI CCGC 4 cut(s) 74, 495, 838, 1299
AclWI GGATC 7 cut(s) 435, 1605, 1703, 2151, 2164, 2190, 2203
AcoI YGGCCR 2 cut(s) 514, 1239
AcsI RAATTY 8 cut(s) 218, 389, 440, 768, 892, 1002, 1343, 2431
AcuI CTGAAG 3 cut(s) 431, 770, 2102
AdeI CACNNNGTG 1 cut(s) 38
AfaI GTAC 3 cut(s) 1950, 1968, 2375
AfeI AGCGCT 1 cut(s) 2089
AfiI CCNNNNNNNGG 3 cut(s) 761, 857, 1650
AflII CTTAAG 1 cut(s) 1645
AgeI ACCGGT 1 cut(s) 183
AgsI TTSAA 5 cut(s) 236, 360, 384, 439, 1543
AhdI GACNNNNNGTC 2 cut(s) 184, 2391
AjnI CCWGG 3 cut(s) 1133, 1349, 1613
AleI CACNNNNGTG 1 cut(s) 162
Alw21I GWGCWC 2 cut(s) 159, 1962
Alw26I GTCTC 7 cut(s) 239, 1183, 1227, 2072, 2294, 2549, 2628
AlwI GGATC 7 cut(s) 435, 1605, 1703, 2151, 2164, 2190, 2203
AlwNI CAGNNNCTG 2 cut(s) 1712, 1790
Aor13HI TCCGGA 1 cut(s) 1849
Aor51HI AGCGCT 1 cut(s) 2089
AoxI GGCC 5 cut(s) 318, 514, 1179, 1239, 2574
ApeKI GCWGC 4 cut(s) 211, 284, 287, 2113
ApoI RAATTY 8 cut(s) 218, 389, 440, 768, 892, 1002, 1343, 2431
AsiGI ACCGGT 1 cut(s) 183
Asp700I GAANNNNTTC 2 cut(s) 893, 2431
AspLEI GCGC 4 cut(s) 1140, 1494, 1599, 2090
AspS9I GGNCC 3 cut(s) 497, 1361, 1379
AsuC2I CCSGG 2 cut(s) 1496, 1971
AsuHPI GGTGA 9 cut(s) 24, 119, 789, 1099, 1334, 1662, 1889, 1892, 2465
AsuII TTCGAA 1 cut(s) 2355
AsuNHI GCTAGC 1 cut(s) 2557
AvaII GGWCC 3 cut(s) 497, 1361, 1379
AxyI CCTNAGG 1 cut(s) 599
BalI TGGCCA 1 cut(s) 1241
BamHI GGATCC 2 cut(s) 2156, 2195
BauI CACGAG 1 cut(s) 279
BbsI GAAGAC 1 cut(s) 2238
Bbv12I GWGCWC 2 cut(s) 159, 1962
BbvI GCAGC 4 cut(s) 223, 274, 296, 2125
BccI CCATC 9 cut(s) 49, 59, 95, 310, 1352, 1397, 1537, 1939, 2534
BcgI CGANNNNNNTGC 2 cut(s) 2087, 2121
BciT130I CCWGG 3 cut(s) 1135, 1351, 1615
BclI TGATCA 2 cut(s) 1579, 2005
BcnI CCSGG 2 cut(s) 1496, 1971
BcoDI GTCTC 7 cut(s) 239, 1183, 1227, 2072, 2294, 2549, 2628
BfaI CTAG 5 cut(s) 192, 930, 939, 1779, 2558
BfmI CTRYAG 4 cut(s) 1365, 1606, 1713, 1888
BfoI RGCGCY 2 cut(s) 1141, 2091
BfrI CTTAAG 1 cut(s) 1645
BfuAI ACCTGC 2 cut(s) 1157, 2103
BisI GCNGC 6 cut(s) 74, 212, 285, 288, 1299, 2114
BlsI GCNGC 6 cut(s) 75, 213, 286, 289, 1300, 2115
BmcAI AGTACT 2 cut(s) 1950, 2375
Bme1390I CCNGG 5 cut(s) 1135, 1351, 1496, 1615, 1971
Bme18I GGWCC 3 cut(s) 497, 1361, 1379
BmeRI GACNNNNNGTC 2 cut(s) 184, 2391
BmgT120I GGNCC 3 cut(s) 497, 1361, 1379
BmiI GGNNCC 4 cut(s) 499, 836, 2158, 2197
BmrFI CCNGG 5 cut(s) 1135, 1351, 1496, 1615, 1971
BmrI ACTGGG 1 cut(s) 2007
BmtI GCTAGC 1 cut(s) 2561
BmuI ACTGGG 1 cut(s) 2007
BpiI GAAGAC 1 cut(s) 2238
BpmI CTGGAG 2 cut(s) 2384, 2465
Bpu14I TTCGAA 1 cut(s) 2355
BpuEI CTTGAG 5 cut(s) 425, 668, 795, 2111, 2155
BpuMI CCSGG 2 cut(s) 1496, 1971
BsaAI YACGTR 1 cut(s) 1508
BsaBI GATNNNNATC 2 cut(s) 1444, 1578
BsaI GGTCTC 2 cut(s) 2294, 2549
BsaJI CCNNGG 6 cut(s) 252, 568, 760, 951, 1350, 2477
BsaWI WCCGGW 3 cut(s) 183, 1849, 2017
BsaXI ACNNNNNCTCC 2 cut(s) 2357, 2387
Bsc4I CCNNNNNNNGG 3 cut(s) 761, 857, 1650
Bse118I RCCGGY 1 cut(s) 183
Bse1I ACTGG 3 cut(s) 1311, 2013, 2336
Bse21I CCTNAGG 1 cut(s) 599
Bse8I GATNNNNATC 2 cut(s) 1444, 1578
BseAI TCCGGA 1 cut(s) 1849
BseBI CCWGG 3 cut(s) 1135, 1351, 1615
BseDI CCNNGG 6 cut(s) 252, 568, 760, 951, 1350, 2477
BseGI GGATG 9 cut(s) 75, 232, 349, 1315, 1408, 1420, 1816, 2115, 2188
BseJI GATNNNNATC 2 cut(s) 1444, 1578
BseLI CCNNNNNNNGG 3 cut(s) 761, 857, 1650
BseNI ACTGG 3 cut(s) 1311, 2013, 2336
BseRI GAGGAG 2 cut(s) 609, 2597
BseXI GCAGC 4 cut(s) 223, 274, 296, 2125
BseYI CCCAGC 1 cut(s) 1728
Bsh1285I CGRYCG 1 cut(s) 2425
BshFI GGCC 5 cut(s) 320, 516, 1181, 1241, 2576
BshTI ACCGGT 1 cut(s) 183
BsiEI CGRYCG 1 cut(s) 2425
BsiHKAI GWGCWC 2 cut(s) 159, 1962
BsiSI CCGG 5 cut(s) 184, 1495, 1850, 1970, 2018
BslFI GGGAC 3 cut(s) 483, 579, 2624
BslI CCNNNNNNNGG 3 cut(s) 761, 857, 1650
BsmAI GTCTC 7 cut(s) 239, 1183, 1227, 2072, 2294, 2549, 2628
BsmFI GGGAC 3 cut(s) 483, 579, 2624
BsmI GAATGC 4 cut(s) 111, 781, 1424, 1841
BsnI GGCC 5 cut(s) 320, 516, 1181, 1241, 2576
Bso31I GGTCTC 2 cut(s) 2294, 2549
Bsp119I TTCGAA 1 cut(s) 2355
Bsp1286I GDGCHC 2 cut(s) 159, 1962
Bsp13I TCCGGA 1 cut(s) 1849
Bsp19I CCATGG 1 cut(s) 2477
BspACI CCGC 4 cut(s) 74, 495, 838, 1299
BspANI GGCC 5 cut(s) 320, 516, 1181, 1241, 2576
BspEI TCCGGA 1 cut(s) 1849
BspLI GGNNCC 4 cut(s) 499, 836, 2158, 2197
BspMI ACCTGC 2 cut(s) 1157, 2103
BspOI GCTAGC 1 cut(s) 2561
BspPI GGATC 7 cut(s) 435, 1605, 1703, 2151, 2164, 2190, 2203
BspQI GCTCTTC 1 cut(s) 2352
BspT104I TTCGAA 1 cut(s) 2355
BspTI CTTAAG 1 cut(s) 1645
BspTNI GGTCTC 2 cut(s) 2294, 2549
BsrBI CCGCTC 1 cut(s) 840
BsrFI RCCGGY 1 cut(s) 183
BsrI ACTGG 3 cut(s) 1311, 2013, 2336
BssAI RCCGGY 1 cut(s) 183
BssECI CCNNGG 6 cut(s) 252, 568, 760, 951, 1350, 2477
BssSI CACGAG 1 cut(s) 279
BssT1I CCWWGG 5 cut(s) 252, 568, 760, 951, 2477
Bst2BI CACGAG 1 cut(s) 279
Bst2UI CCWGG 3 cut(s) 1135, 1351, 1615
Bst4CI ACNGT 5 cut(s) 611, 1953, 2378, 2418, 2503
Bst6I CTCTTC 4 cut(s) 1181, 2226, 2352, 2562
BstAFI CTTAAG 1 cut(s) 1645
BstAPI GCANNNNNTGC 1 cut(s) 487
BstBAI YACGTR 1 cut(s) 1508
BstBI TTCGAA 1 cut(s) 2355
BstC8I GCNNGC 9 cut(s) 1033, 1243, 1272, 1296, 1990, 2214, 2322, 2559, 2563
BstDSI CCRYGG 1 cut(s) 2477
BstENI CCTNNNNNAGG 1 cut(s) 1648
BstF5I GGATG 9 cut(s) 75, 232, 349, 1315, 1408, 1420, 1816, 2115, 2188
BstH2I RGCGCY 2 cut(s) 1141, 2091
BstHHI GCGC 4 cut(s) 1140, 1494, 1599, 2090
BstMAI GTCTC 7 cut(s) 239, 1183, 1227, 2072, 2294, 2549, 2628
BstMCI CGRYCG 1 cut(s) 2425
BstNI CCWGG 3 cut(s) 1135, 1351, 1615
BstNSI RCATGY 3 cut(s) 668, 1057, 2216
BstSCI CCNGG 5 cut(s) 1133, 1349, 1494, 1613, 1969
BstSFI CTRYAG 4 cut(s) 1365, 1606, 1713, 1888
BstV1I GCAGC 4 cut(s) 223, 274, 296, 2125
BstV2I GAAGAC 1 cut(s) 2238
BstX2I RGATCY 5 cut(s) 427, 1610, 1708, 2156, 2195
BstXI CCANNNNNNTGG 1 cut(s) 55
BstYI RGATCY 5 cut(s) 427, 1610, 1708, 2156, 2195
Bsu36I CCTNAGG 1 cut(s) 599
BsuRI GGCC 5 cut(s) 320, 516, 1181, 1241, 2576
BtgI CCRYGG 1 cut(s) 2477
BtgZI GCGATG 2 cut(s) 73, 1050
BtsCI GGATG 9 cut(s) 75, 232, 349, 1315, 1408, 1420, 1816, 2115, 2188
BtsIMutI CAGTG 3 cut(s) 310, 2343, 2470
BveI ACCTGC 2 cut(s) 1157, 2103
Cac8I GCNNGC 9 cut(s) 1033, 1243, 1272, 1296, 1990, 2214, 2322, 2559, 2563
CaiI CAGNNNCTG 2 cut(s) 1712, 1790
CfoI GCGC 4 cut(s) 1140, 1494, 1599, 2090
Cfr10I RCCGGY 1 cut(s) 183
Cfr13I GGNCC 3 cut(s) 497, 1361, 1379
CseI GACGC 1 cut(s) 1847
Csp6I GTAC 3 cut(s) 1949, 1967, 2374
CspAI ACCGGT 1 cut(s) 183
CviQI GTAC 3 cut(s) 1949, 1967, 2374
DraI TTTAAA 2 cut(s) 1021, 2283
DraIII CACNNNGTG 1 cut(s) 38
DrdI GACNNNNNNGTC 1 cut(s) 1219
DriI GACNNNNNGTC 2 cut(s) 184, 2391
DseDI GACNNNNNNGTC 1 cut(s) 1219
EaeI YGGCCR 2 cut(s) 514, 1239
Eam1104I CTCTTC 4 cut(s) 1181, 2226, 2352, 2562
Eam1105I GACNNNNNGTC 2 cut(s) 184, 2391
EarI CTCTTC 4 cut(s) 1181, 2226, 2352, 2562
Eco130I CCWWGG 5 cut(s) 252, 568, 760, 951, 2477
Eco31I GGTCTC 2 cut(s) 2294, 2549
Eco47I GGWCC 3 cut(s) 497, 1361, 1379
Eco47III AGCGCT 1 cut(s) 2089
Eco57I CTGAAG 3 cut(s) 431, 770, 2102
Eco81I CCTNAGG 1 cut(s) 599
EcoNI CCTNNNNNAGG 1 cut(s) 1648
EcoRI GAATTC 1 cut(s) 389
EcoRII CCWGG 3 cut(s) 1133, 1349, 1613
EcoT14I CCWWGG 5 cut(s) 252, 568, 760, 951, 2477
EcoT22I ATGCAT 2 cut(s) 880, 1424
ErhI CCWWGG 5 cut(s) 252, 568, 760, 951, 2477
FaqI GGGAC 3 cut(s) 483, 579, 2624
FauNDI CATATG 1 cut(s) 2146
FbaI TGATCA 2 cut(s) 1579, 2005
FblI GTMKAC 2 cut(s) 661, 1716
Fnu4HI GCNGC 6 cut(s) 74, 212, 285, 288, 1299, 2114
FokI GGATG 9 cut(s) 82, 239, 356, 1322, 1415, 1427, 1823, 2122, 2195
Fsp4HI GCNGC 6 cut(s) 74, 212, 285, 288, 1299, 2114
FspBI CTAG 5 cut(s) 192, 930, 939, 1779, 2558
GlaI GCGC 4 cut(s) 1139, 1493, 1598, 2089
GluI GCNGC 6 cut(s) 74, 212, 285, 288, 1299, 2114
GsaI CCCAGC 1 cut(s) 1732
GsuI CTGGAG 2 cut(s) 2384, 2465
HaeII RGCGCY 2 cut(s) 1141, 2091
HaeIII GGCC 5 cut(s) 320, 516, 1181, 1241, 2576
HapII CCGG 5 cut(s) 184, 1495, 1850, 1970, 2018
HgaI GACGC 1 cut(s) 1847
HhaI GCGC 4 cut(s) 1140, 1494, 1599, 2090
Hin6I GCGC 4 cut(s) 1138, 1492, 1597, 2088
HinP1I GCGC 4 cut(s) 1138, 1492, 1597, 2088
HincII GTYRAC 1 cut(s) 2268
HindII GTYRAC 1 cut(s) 2268
HindIII AAGCTT 1 cut(s) 813
HpaI GTTAAC 1 cut(s) 2268
HpaII CCGG 5 cut(s) 184, 1495, 1850, 1970, 2018
HphI GGTGA 9 cut(s) 24, 119, 789, 1099, 1334, 1662, 1889, 1892, 2465
Hpy166II GTNNAC 5 cut(s) 468, 662, 1379, 1717, 2268
Hpy8I GTNNAC 5 cut(s) 468, 662, 1379, 1717, 2268
HpyAV CCTTC 6 cut(s) 18, 1405, 1871, 2186, 2314, 2566
HpyCH4III ACNGT 5 cut(s) 611, 1953, 2378, 2418, 2503
HpyCH4IV ACGT 1 cut(s) 1507
HpySE526I ACGT 1 cut(s) 1507
HspAI GCGC 4 cut(s) 1138, 1492, 1597, 2088
Kpn2I TCCGGA 1 cut(s) 1849
Ksp22I TGATCA 2 cut(s) 1579, 2005
KspAI GTTAAC 1 cut(s) 2268
LguI GCTCTTC 1 cut(s) 2352
LmnI GCTCC 2 cut(s) 208, 1646
Lsp1109I GCAGC 4 cut(s) 223, 274, 296, 2125
MaeI CTAG 5 cut(s) 192, 930, 939, 1779, 2558
MaeII ACGT 1 cut(s) 1507
MaeIII GTNAC 7 cut(s) 125, 269, 687, 1895, 2174, 2378, 2465
MbiI CCGCTC 1 cut(s) 840
MflI RGATCY 5 cut(s) 427, 1610, 1708, 2156, 2195
MhlI GDGCHC 2 cut(s) 159, 1962
MlsI TGGCCA 1 cut(s) 1241
MluNI TGGCCA 1 cut(s) 1241
MlyI GAGTC 9 cut(s) 452, 944, 1185, 1207, 1760, 2074, 2252, 2350, 2606
MmeI TCCRAC 3 cut(s) 393, 2091, 2112
Mox20I TGGCCA 1 cut(s) 1241
Mph1103I ATGCAT 2 cut(s) 880, 1424
MroI TCCGGA 1 cut(s) 1849
MroXI GAANNNNTTC 2 cut(s) 893, 2431
MscI TGGCCA 1 cut(s) 1241
MseI TTAA 8 cut(s) 222, 1020, 1646, 2043, 2267, 2282, 2520, 2687
MslI CAYNNNNRTG 3 cut(s) 162, 480, 986
Msp20I TGGCCA 1 cut(s) 1241
MspA1I CMGCKG 1 cut(s) 287
MspCI CTTAAG 1 cut(s) 1645
MspI CCGG 5 cut(s) 184, 1495, 1850, 1970, 2018
MspR9I CCNGG 5 cut(s) 1135, 1351, 1496, 1615, 1971
MssI GTTTAAAC 1 cut(s) 2283
Mva1269I GAATGC 4 cut(s) 111, 781, 1424, 1841
MvaI CCWGG 3 cut(s) 1135, 1351, 1615
NciI CCSGG 2 cut(s) 1496, 1971
NcoI CCATGG 1 cut(s) 2477
NdeI CATATG 1 cut(s) 2146
NheI GCTAGC 1 cut(s) 2557
NlaIV GGNNCC 4 cut(s) 499, 836, 2158, 2197
NmeAIII GCCGAG 1 cut(s) 542
NmuCI GTSAC 6 cut(s) 125, 687, 1895, 2174, 2378, 2465
NsiI ATGCAT 2 cut(s) 880, 1424
NspI RCATGY 3 cut(s) 668, 1057, 2216
NspV TTCGAA 1 cut(s) 2355
OliI CACNNNNGTG 1 cut(s) 162
PaeI GCATGC 1 cut(s) 2216
PciSI GCTCTTC 1 cut(s) 2352
PctI GAATGC 4 cut(s) 111, 781, 1424, 1841
PdmI GAANNNNTTC 2 cut(s) 893, 2431
PflMI CCANNNNNTGG 1 cut(s) 761
PfoI TCCNGGA 1 cut(s) 1613
PinAI ACCGGT 1 cut(s) 183
PkrI GCNGC 6 cut(s) 75, 213, 286, 289, 1300, 2115
PleI GAGTC 9 cut(s) 452, 943, 1185, 1207, 1759, 2074, 2251, 2349, 2606
PmeI GTTTAAAC 1 cut(s) 2283
PpsI GAGTC 9 cut(s) 452, 943, 1185, 1207, 1759, 2074, 2251, 2349, 2606
Ppu21I YACGTR 1 cut(s) 1508
PsiI TTATAA 1 cut(s) 1482
Psp6I CCWGG 3 cut(s) 1133, 1349, 1613
PspFI CCCAGC 1 cut(s) 1728
PspGI CCWGG 3 cut(s) 1133, 1349, 1613
PspN4I GGNNCC 4 cut(s) 499, 836, 2158, 2197
PspPI GGNCC 3 cut(s) 497, 1361, 1379
PstNI CAGNNNCTG 2 cut(s) 1712, 1790
PsuI RGATCY 5 cut(s) 427, 1610, 1708, 2156, 2195
PvuII CAGCTG 1 cut(s) 287
RsaI GTAC 3 cut(s) 1950, 1968, 2375
RsaNI GTAC 3 cut(s) 1949, 1967, 2374
RseI CAYNNNNRTG 3 cut(s) 162, 480, 986
SapI GCTCTTC 1 cut(s) 2352
SaqAI TTAA 8 cut(s) 222, 1020, 1646, 2043, 2267, 2282, 2520, 2687
SatI GCNGC 6 cut(s) 74, 212, 285, 288, 1299, 2114
Sau96I GGNCC 3 cut(s) 497, 1361, 1379
ScaI AGTACT 2 cut(s) 1950, 2375
SchI GAGTC 9 cut(s) 452, 944, 1185, 1207, 1760, 2074, 2252, 2350, 2606
ScrFI CCNGG 5 cut(s) 1135, 1351, 1496, 1615, 1971
SduI GDGCHC 2 cut(s) 159, 1962
SfcI CTRYAG 4 cut(s) 1365, 1606, 1713, 1888
SfuI TTCGAA 1 cut(s) 2355
SinI GGWCC 3 cut(s) 497, 1361, 1379
SmiMI CAYNNNNRTG 3 cut(s) 162, 480, 986
SmlI CTYRAG 6 cut(s) 404, 683, 810, 1645, 2126, 2170
SmoI CTYRAG 6 cut(s) 404, 683, 810, 1645, 2126, 2170
SphI GCATGC 1 cut(s) 2216
SsiI CCGC 4 cut(s) 74, 495, 838, 1299
SspMI CTAG 5 cut(s) 192, 930, 939, 1779, 2558
StyD4I CCNGG 5 cut(s) 1133, 1349, 1494, 1613, 1969
StyI CCWWGG 5 cut(s) 252, 568, 760, 951, 2477
TaaI ACNGT 5 cut(s) 611, 1953, 2378, 2418, 2503
TaiI ACGT 1 cut(s) 1510
TaqI TCGA 5 cut(s) 20, 328, 873, 2355, 2421
TaqII GACCGA 1 cut(s) 2439
TatI WGTACW 2 cut(s) 1948, 2373
TauI GCSGC 2 cut(s) 76, 1301
Tru1I TTAA 8 cut(s) 222, 1020, 1646, 2043, 2267, 2282, 2520, 2687
Tru9I TTAA 8 cut(s) 222, 1020, 1646, 2043, 2267, 2282, 2520, 2687
TscAI CASTG 3 cut(s) 310, 2343, 2470
TseFI GTSAC 6 cut(s) 125, 687, 1895, 2174, 2378, 2465
TseI GCWGC 4 cut(s) 211, 284, 287, 2113
Tsp45I GTSAC 6 cut(s) 125, 687, 1895, 2174, 2378, 2465
TspGWI ACGGA 1 cut(s) 2537
TspRI CASTG 3 cut(s) 310, 2343, 2470
Van91I CCANNNNNTGG 1 cut(s) 761
Vha464I CTTAAG 1 cut(s) 1645
VpaK11BI GGWCC 3 cut(s) 497, 1361, 1379
XagI CCTNNNNNAGG 1 cut(s) 1648
XapI RAATTY 8 cut(s) 218, 389, 440, 768, 892, 1002, 1343, 2431
XbaI TCTAGA 2 cut(s) 929, 938
XceI RCATGY 3 cut(s) 668, 1057, 2216
XcmI CCANNNNNNNNNTGG 1 cut(s) 509
XmiI GTMKAC 2 cut(s) 661, 1716
XmnI GAANNNNTTC 2 cut(s) 893, 2431
XspI CTAG 5 cut(s) 192, 930, 939, 1779, 2558
ZrmI AGTACT 2 cut(s) 1950, 2375
Zsp2I ATGCAT 2 cut(s) 880, 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.