Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0003821

Physical Location & Seq

Genomic Coordinates Reverse (-)

36278030 .. 36282544

Gene Structure 4515 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024478

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGGAGAAGTTGCGGCCAACGAGGTCCAAGATTTCGAGCTTTTCTGATCGGAGAAGCTCCGGCGAGAGATTCGCCTCCAAAGAACGAGCTTCCTCACGAGGAAACAGGCCAGTTCAGAAGCAGAAGAAATTGGGCTCTGATTCTAGCTCTTGCAGTAGTGGCTCTACAGGGGAAGATCCGTTGACGTTTGAGTTGGGGTGGAGATCTTCAAAGCAAGCTGTTGGAGCTCCAATAAAGAAATTATTAGCTGACGAGATGTTGAGAGAAACTGAATCCAGAAGGAGATCACCAAGTGTTATTGCCAAATTGATGGGTCTTGATGGGATGCCACCCCAACAGCCCATCACTCATAAACAACAAAAAGGGATTCTGGAGAATCGTCATCAGAGGACAAGATCAGTAGAGAAAGAGCACAGAAGTGGCGTGTGTTATGACCACCGGTCATCTAGGAAGAACTCAAAGGAGCAGCAGGAATTTAAGGATGTGTTTGAAGTTTTGGAAACTTCCAAGGTGGAAAGTTTTAGATACTCATCACGAGCAGCTGCTAACACCAAGCTCAGTGATGCAGAGATGGCTTTTGTTCGACAGAAGTTCATGGATGCTAAACGACTTTCAACTGATGAGAAGCTACAAGATTCAAAGGAATTCCATGATGCCCTTGAGGTGTTGGATTCTAACAAGGATCTTCTGTTGAAATTTCTTCAGCAACCAGACTCATTGTTCACAAAACATCTGAATGATCTGCATACTGGTCCCCAATCCCATTGTGGCCGAGTAGCATCAATGAAGTCATCAGAAGCTCAGCAGTATGAGAAAATTGACCTCGGCTGGACATCAGCAAGAGAAAAGAATTACTGTAAATCTCCTCAGAGGCATCGTGATTCTTTTTCTAGCTACTCTGATAGTAGACATGCTACTCGTTATTCTCTCAAGTCATCACAATACCGATCAGAAGCAAAACATGAAACAGCCATTACTCCCACAAGGATAGTTGTTCTGAAGCCAAACCTAGGGAAGGTACTGAATGCTGCCAAAACTATTTCATCACCTTGTTCTTCTCAAGCTAGTATGTCAGTTTGTAGGAACCGCTCAGATTTTCCTAGCGCTGGAGATAGGGAGGTTGATACATGGGGAAAGAAAAACTTCCCAGATAATGAAGGGCAGTCAAGGCATAAGTCTAGAGAATCTAGAGAAGTGGCTAAGGAAATTACAAGACAAATGAGAAATAACCTCAGCATCGGTTCTGTGCAATTTTCATCATCTGGATTTAAAGGATATGCTGGCGATGAGAGTTCTTGTAGCATGTCAGAGAATGAATCAGGAAATGAATCAGAGGTGATTTCAGTGGCTTCCAAACAATCCTTTGACATACATAACCACTCCAGGCGCTCATCAACCTGCTCTTCTGAATCTTCTGTGAGTAGAGAGGCCAAGAAGAGACTCTCAGAGAGGTGGAAAATGACTCATAAGTCCCAGGAAGCGGGAGTGGCTAGCAGGGGCAGTACACTTGCTGAAATGCTTGCTATCACAGACAAAGAAATGCAAGCCACAAAATTGGATGCCATGAAAGGTGAGGCAGGATTCAGAGATAAATTTGCCAGAGAGGATGGACCTATAGGGTGGGGTGGACCTCTTGGTATCAGCAGTAGGGATGGCTGGAAGGATGAATGCATCACAAGTTTATCAAGATCGAAATCTCTCCCCGCTTCTTCTAGTGCATTTGGGAATTATAAGACAAGTATGCGCCGGGAAACCATACGTGATGACAGGTATCTGATACCAGCCGAGGCATTCAAGCATAAAAGAAATCAATCAGTAGTTGATTTTGATCATAGAGAAGGTGGGCCCAGAAACTATAGATCCAGGTATAAAAGATCGTATAGTTCTCGCTCCTTAAGTAGGGAAAGTATGGACATTTCACCTGAGACTCCTATTACTCCTGATGGAGTAAGAACTGATCCTGAAGAGAAAGAGAACAAGCAATCTCAGCAGAATATGGCTGTTGTGGAGTCATCGTCTGGTAATGGCATAGATGCTAGTCCAGCTTCTGTAAAGTTGGTGGATGTATCCATATCTGCTCGTATGTCGGTGGAAGGCGATTCCTGTAGCAGTCACCAAGATAGCCTAATTGCACAGGAACCATCAACTAGACCATCTGATGAAAAGTCAGTCCCGTCTGAGCACTCTGTACCTGGTATAGAATCTCTTGCAAGCTCTAAAGAGGCTGATCAGCCCAGTCCAGTTTCAGTTCTGGAGGTTCCTTTCATCGATGACGTGTCATCTTCTTCCGACTGCTTTGAGACTCTCAGCGCTGACCTGCAAGGGCTTCGGATGCAGCTTCAGCTACTCAAGTTGGAATCGGATTCATATGCAGAGGGATCCATGCTACTCTCAAGTGATGAAGATGCAGGAGAAGGATCTACTTGGTTTGGGGATGCAATATGTAGGGAAGGAGAGAGCTGGGAGTCTTCATACATGGTTGATATGTTAAATGAATCGGGTTTAAACAATGCCAACTATGAGACCTTCTTGGCTACATGGCACACTCCAGAGTGTCCAATAACGGTTGGCCCAAAGTGGATTAACAAAACTGCCCTCCAAGATGGTCTCCGTAAGTTGCTGGCTAGTGAAGGGAAAGCCAATGAGGAGAGTTTGGACAAACTGCTGGAAAGGGACTCGCTGTGGTCGCATTTCGGAGACTACATTGACATAATAGGTAGGGAAGTAGAGAAGTCGTTGTTAGATGAGTTAGTTGCAGAGGTAGTGGTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378 VARLMGL

Protein Analysis

925

Amino Acids

102.98

Weight (kDa)

6.76

Isoelectric Point (pI)

62.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	92 - 113	3.3e-07	DUF761-associated sequence motif
DUF3741	PF12552	195 - 239	1.9e-22	Protein of unknown function (DUF3741)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53540 AT3G53540
fragaria_vesca	FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620
malus_domestica	MD04G1118500.v1.1 MD12G1134100.v1.1 MD12G1134200.v1.1 MD12G1134300.v1.1 MD12G1134400.v1.1
prunus_persica	Prupe.6G247900_v2.0.a1 Prupe.6G247900_v2.0.a1
pyrus_communis	pycom04g10820 pycom12g12970
rosa_chinensis	RchiOBHm_Chr3g0467721
rosa_laevigata	RLG00000024478
rosa_multiflora	Rmu_co8048390.1_g000001 Rmu_co8092630.1_g000001 Rmu_co8309069.1_g000001 Rmu_sc0001793.1_g000010 Rmu_sc0013459.1_g000002
rosa_roxburghii	Rroxscaffold_6G00413480
rosa_rugosa	Rorug03G0089200 Rorug03G0089200
rosa_samantha	Rh3AG137700 Rh3BG159000 Rh3CG158900 Rh3DG159500
rosa_wichuraiana	Rw3G013040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1731
AasI	GACNNNNNNGTC	1 cut(s)	1468
Acc36I	ACCTGC	2 cut(s)	1406, 2325
AccBSI	CCGCTC	1 cut(s)	1089
AccI	GTMKAC	1 cut(s)	907
AciI	CCGC	4 cut(s)	13, 1087, 1481, 1704
AclWI	GGATC	7 cut(s)	170, 690, 1854, 1952, 2373, 2386, 2425
AcoI	YGGCCR	2 cut(s)	14, 769
AcsI	RAATTY	4 cut(s)	473, 644, 695, 1592
AcuI	CTGAAG	4 cut(s)	686, 1019, 1983, 2324
AdeI	CACNNNGTG	1 cut(s)	293
AfaI	GTAC	3 cut(s)	1020, 1504, 2190
AfeI	AGCGCT	2 cut(s)	1105, 2311
AfiI	CCNNNNNNNGG	5 cut(s)	1010, 1015, 1106, 1480, 1899
AflII	CTTAAG	1 cut(s)	1894
AflIII	ACRYGT	1 cut(s)	2274
AgeI	ACCGGT	1 cut(s)	438
AgsI	TTSAA	6 cut(s)	210, 491, 615, 639, 694, 1795
AhdI	GACNNNNNGTC	1 cut(s)	439
AjiI	CACGTC	1 cut(s)	2275
AjnI	CCWGG	4 cut(s)	1382, 1473, 1862, 2191
AleI	CACNNNNGTG	1 cut(s)	417
Alw21I	GWGCWC	3 cut(s)	229, 414, 2184
Alw26I	GTCTC	6 cut(s)	1432, 1919, 2294, 2516, 2612, 2691
AlwI	GGATC	7 cut(s)	170, 690, 1854, 1952, 2373, 2386, 2425
AlwNI	CAGNNNCTG	1 cut(s)	2048
Aor51HI	AGCGCT	2 cut(s)	1105, 2311
AoxI	GGCC	6 cut(s)	14, 107, 769, 1428, 1844, 2569
ApaI	GGGCCC	1 cut(s)	1848
ApeKI	GCWGC	5 cut(s)	466, 539, 542, 1028, 2335
ApoI	RAATTY	4 cut(s)	473, 644, 695, 1592
AsiGI	ACCGGT	1 cut(s)	438
Asp700I	GAANNNNTTC	1 cut(s)	1142
AspA2I	CCTAGG	1 cut(s)	1009
AspLEI	GCGC	4 cut(s)	1106, 1389, 1746, 2312
AspS9I	GGNCC	7 cut(s)	24, 752, 1610, 1628, 1844, 1845, 2570
AsuC2I	CCSGG	1 cut(s)	1748
AsuHPI	GGTGA	6 cut(s)	279, 1038, 1348, 1583, 1911, 2105
AsuNHI	GCTAGC	1 cut(s)	1490
AvaII	GGWCC	4 cut(s)	24, 752, 1610, 1628
AvrII	CCTAGG	1 cut(s)	1009
BaeGI	GKGCMC	1 cut(s)	1848
BamHI	GGATCC	1 cut(s)	2378
BanII	GRGCYC	3 cut(s)	137, 229, 1848
BauI	CACGAG	2 cut(s)	96, 534
BbsI	GAAGAC	1 cut(s)	2460
Bbv12I	GWGCWC	3 cut(s)	229, 414, 2184
BbvCI	CCTCAGC	1 cut(s)	1232
BbvI	GCAGC	5 cut(s)	478, 529, 551, 1015, 2347
BcgI	CGANNNNNNTGC	2 cut(s)	2309, 2343
BciT130I	CCWGG	4 cut(s)	1384, 1475, 1864, 2193
BciVI	GTATCC	1 cut(s)	2077
BclI	TGATCA	2 cut(s)	1828, 2227
BcnI	CCSGG	1 cut(s)	1748
BcoDI	GTCTC	6 cut(s)	1432, 1919, 2294, 2516, 2612, 2691
BfmI	CTRYAG	4 cut(s)	165, 1614, 1855, 2104
BfoI	RGCGCY	3 cut(s)	1107, 1390, 2313
BfrI	CTTAAG	1 cut(s)	1894
BfuAI	ACCTGC	2 cut(s)	1406, 2325
BfuI	GTATCC	1 cut(s)	2077
BglII	AGATCT	1 cut(s)	203
BisI	GCNGC	6 cut(s)	14, 467, 540, 543, 1029, 2336
BlnI	CCTAGG	1 cut(s)	1009
BlpI	GCTNAGC	1 cut(s)	801
BlsI	GCNGC	6 cut(s)	15, 468, 541, 544, 1030, 2337
Bme1390I	CCNGG	5 cut(s)	1384, 1475, 1748, 1864, 2193
Bme18I	GGWCC	4 cut(s)	24, 752, 1610, 1628
BmeRI	GACNNNNNGTC	1 cut(s)	439
BmgBI	CACGTC	1 cut(s)	2275
BmgT120I	GGNCC	7 cut(s)	24, 752, 1610, 1628, 1844, 1845, 2570
BmiI	GGNNCC	6 cut(s)	754, 1085, 1846, 2139, 2259, 2380
BmrFI	CCNGG	5 cut(s)	1384, 1475, 1748, 1864, 2193
BmrI	ACTGGG	1 cut(s)	2229
BmtI	GCTAGC	1 cut(s)	1494
BmuI	ACTGGG	1 cut(s)	2229
BpiI	GAAGAC	1 cut(s)	2460
BpmI	CTGGAG	5 cut(s)	392, 1128, 1366, 2273, 2532
Bpu10I	CCTNAGC	2 cut(s)	1200, 1232
Bpu1102I	GCTNAGC	1 cut(s)	801
BpuEI	CTTGAG	5 cut(s)	680, 914, 1044, 2333, 2377
BpuMI	CCSGG	1 cut(s)	1748
Bsa29I	ATCGAT	1 cut(s)	2268
BsaAI	YACGTR	1 cut(s)	1760
BsaBI	GATNNNNATC	3 cut(s)	529, 1693, 1827
BsaI	GGTCTC	2 cut(s)	2516, 2612
BsaJI	CCNNGG	5 cut(s)	507, 823, 1009, 1473, 1785
BsaWI	WCCGGW	1 cut(s)	438
BsaXI	ACNNNNNCTCC	2 cut(s)	2000, 2030
Bsc4I	CCNNNNNNNGG	5 cut(s)	1010, 1015, 1106, 1480, 1899
Bse118I	RCCGGY	1 cut(s)	438
Bse1I	ACTGG	4 cut(s)	110, 754, 2235, 2240
Bse8I	GATNNNNATC	3 cut(s)	529, 1693, 1827
BseBI	CCWGG	4 cut(s)	1384, 1475, 1864, 2193
BseCI	ATCGAT	1 cut(s)	2268
BseDI	CCNNGG	5 cut(s)	507, 823, 1009, 1473, 1785
BseJI	GATNNNNATC	3 cut(s)	529, 1693, 1827
BseLI	CCNNNNNNNGG	5 cut(s)	1010, 1015, 1106, 1480, 1899
BseNI	ACTGG	4 cut(s)	110, 754, 2235, 2240
BseRI	GAGGAG	2 cut(s)	855, 2660
BseSI	GKGCMC	1 cut(s)	1848
BseXI	GCAGC	5 cut(s)	478, 529, 551, 1015, 2347
BseYI	CCCAGC	1 cut(s)	2460
BshFI	GGCC	6 cut(s)	16, 109, 771, 1430, 1846, 2571
BshTI	ACCGGT	1 cut(s)	438
BshVI	ATCGAT	1 cut(s)	2268
BsiHKAI	GWGCWC	3 cut(s)	229, 414, 2184
BsiSI	CCGG	3 cut(s)	60, 439, 1747
BslFI	GGGAC	4 cut(s)	738, 1456, 2156, 2687
BslI	CCNNNNNNNGG	5 cut(s)	1010, 1015, 1106, 1480, 1899
BsmAI	GTCTC	6 cut(s)	1432, 1919, 2294, 2516, 2612, 2691
BsmFI	GGGAC	4 cut(s)	738, 1456, 2156, 2687
BsmI	GAATGC	3 cut(s)	1030, 1673, 1790
BsnI	GGCC	6 cut(s)	16, 109, 771, 1430, 1846, 2571
Bso31I	GGTCTC	2 cut(s)	2516, 2612
Bsp120I	GGGCCC	1 cut(s)	1844
Bsp1286I	GDGCHC	5 cut(s)	137, 229, 414, 1848, 2184
Bsp1720I	GCTNAGC	1 cut(s)	801
BspACI	CCGC	4 cut(s)	13, 1087, 1481, 1704
BspANI	GGCC	6 cut(s)	16, 109, 771, 1430, 1846, 2571
BspDI	ATCGAT	1 cut(s)	2268
BspLI	GGNNCC	6 cut(s)	754, 1085, 1846, 2139, 2259, 2380
BspMI	ACCTGC	2 cut(s)	1406, 2325
BspOI	GCTAGC	1 cut(s)	1494
BspPI	GGATC	7 cut(s)	170, 690, 1854, 1952, 2373, 2386, 2425
BspQI	GCTCTTC	1 cut(s)	1408
BspTI	CTTAAG	1 cut(s)	1894
BspTNI	GGTCTC	2 cut(s)	2516, 2612
BsrBI	CCGCTC	1 cut(s)	1089
BsrFI	RCCGGY	1 cut(s)	438
BsrI	ACTGG	4 cut(s)	110, 754, 2235, 2240
BssAI	RCCGGY	1 cut(s)	438
BssECI	CCNNGG	5 cut(s)	507, 823, 1009, 1473, 1785
BssSI	CACGAG	2 cut(s)	96, 534
BssT1I	CCWWGG	2 cut(s)	507, 1009
Bst2BI	CACGAG	2 cut(s)	96, 534
Bst2UI	CCWGG	4 cut(s)	1384, 1475, 1864, 2193
Bst4CI	ACNGT	2 cut(s)	857, 2566
Bst6I	CTCTTC	3 cut(s)	1408, 1430, 1959
BstAFI	CTTAAG	1 cut(s)	1894
BstBAI	YACGTR	1 cut(s)	1760
BstC8I	GCNNGC	7 cut(s)	216, 1282, 1492, 1521, 1545, 2212, 2622
BstENI	CCTNNNNNAGG	2 cut(s)	1013, 1897
BstH2I	RGCGCY	3 cut(s)	1107, 1390, 2313
BstHHI	GCGC	4 cut(s)	1106, 1389, 1746, 2312
BstMAI	GTCTC	6 cut(s)	1432, 1919, 2294, 2516, 2612, 2691
BstNI	CCWGG	4 cut(s)	1384, 1475, 1864, 2193
BstNSI	RCATGY	2 cut(s)	914, 1306
BstSCI	CCNGG	5 cut(s)	1382, 1473, 1746, 1862, 2191
BstSFI	CTRYAG	4 cut(s)	165, 1614, 1855, 2104
BstSLI	GKGCMC	1 cut(s)	1848
BstV1I	GCAGC	5 cut(s)	478, 529, 551, 1015, 2347
BstV2I	GAAGAC	1 cut(s)	2460
BstX2I	RGATCY	6 cut(s)	175, 203, 682, 1859, 2378, 2417
BstXI	CCANNNNNNTGG	2 cut(s)	310, 1555
BstYI	RGATCY	6 cut(s)	175, 203, 682, 1859, 2378, 2417
Bsu15I	ATCGAT	1 cut(s)	2268
BsuI	GTATCC	1 cut(s)	2077
BsuRI	GGCC	6 cut(s)	16, 109, 771, 1430, 1846, 2571
BsuTUI	ATCGAT	1 cut(s)	2268
BtgZI	GCGATG	1 cut(s)	1299
BtrI	CACGTC	1 cut(s)	2275
BtsIMutI	CAGTG	2 cut(s)	565, 1350
BveI	ACCTGC	2 cut(s)	1406, 2325
Cac8I	GCNNGC	7 cut(s)	216, 1282, 1492, 1521, 1545, 2212, 2622
CaiI	CAGNNNCTG	1 cut(s)	2048
CfoI	GCGC	4 cut(s)	1106, 1389, 1746, 2312
Cfr10I	RCCGGY	1 cut(s)	438
Cfr13I	GGNCC	7 cut(s)	24, 752, 1610, 1628, 1844, 1845, 2570
ClaI	ATCGAT	1 cut(s)	2268
CsiI	ACCWGGT	1 cut(s)	2191
Csp6I	GTAC	3 cut(s)	1019, 1503, 2189
CspAI	ACCGGT	1 cut(s)	438
CviQI	GTAC	3 cut(s)	1019, 1503, 2189
DraI	TTTAAA	2 cut(s)	1270, 2505
DraIII	CACNNNGTG	1 cut(s)	293
DrdI	GACNNNNNNGTC	1 cut(s)	1468
DriI	GACNNNNNGTC	1 cut(s)	439
DseDI	GACNNNNNNGTC	1 cut(s)	1468
EaeI	YGGCCR	2 cut(s)	14, 769
Eam1104I	CTCTTC	3 cut(s)	1408, 1430, 1959
Eam1105I	GACNNNNNGTC	1 cut(s)	439
EarI	CTCTTC	3 cut(s)	1408, 1430, 1959
Ecl136II	GAGCTC	1 cut(s)	227
Eco130I	CCWWGG	2 cut(s)	507, 1009
Eco24I	GRGCYC	3 cut(s)	137, 229, 1848
Eco31I	GGTCTC	2 cut(s)	2516, 2612
Eco47I	GGWCC	4 cut(s)	24, 752, 1610, 1628
Eco47III	AGCGCT	2 cut(s)	1105, 2311
Eco53kI	GAGCTC	1 cut(s)	227
Eco57I	CTGAAG	4 cut(s)	686, 1019, 1983, 2324
EcoICRI	GAGCTC	1 cut(s)	227
EcoNI	CCTNNNNNAGG	2 cut(s)	1013, 1897
EcoRI	GAATTC	1 cut(s)	644
EcoRII	CCWGG	4 cut(s)	1382, 1473, 1862, 2191
EcoT14I	CCWWGG	2 cut(s)	507, 1009
EcoT22I	ATGCAT	1 cut(s)	1673
EcoT38I	GRGCYC	3 cut(s)	137, 229, 1848
ErhI	CCWWGG	2 cut(s)	507, 1009
FalI	AAGNNNNNCTT	2 cut(s)	1127, 1159
FaqI	GGGAC	4 cut(s)	738, 1456, 2156, 2687
FauI	CCCGC	2 cut(s)	1474, 1711
FauNDI	CATATG	1 cut(s)	2368
FbaI	TGATCA	2 cut(s)	1828, 2227
FblI	GTMKAC	1 cut(s)	907
Fnu4HI	GCNGC	6 cut(s)	14, 467, 540, 543, 1029, 2336
FriOI	GRGCYC	3 cut(s)	137, 229, 1848
Fsp4HI	GCNGC	6 cut(s)	14, 467, 540, 543, 1029, 2336
GlaI	GCGC	4 cut(s)	1105, 1388, 1745, 2311
GluI	GCNGC	6 cut(s)	14, 467, 540, 543, 1029, 2336
GsaI	CCCAGC	1 cut(s)	2464
GsuI	CTGGAG	5 cut(s)	392, 1128, 1366, 2273, 2532
HaeII	RGCGCY	3 cut(s)	1107, 1390, 2313
HaeIII	GGCC	6 cut(s)	16, 109, 771, 1430, 1846, 2571
HapII	CCGG	3 cut(s)	60, 439, 1747
HhaI	GCGC	4 cut(s)	1106, 1389, 1746, 2312
Hin6I	GCGC	4 cut(s)	1104, 1387, 1744, 2310
HinP1I	GCGC	4 cut(s)	1104, 1387, 1744, 2310
HincII	GTYRAC	1 cut(s)	183
HindII	GTYRAC	1 cut(s)	183
HpaII	CCGG	3 cut(s)	60, 439, 1747
HphI	GGTGA	6 cut(s)	279, 1038, 1348, 1583, 1911, 2105
Hpy166II	GTNNAC	5 cut(s)	183, 723, 908, 1505, 1628
Hpy8I	GTNNAC	5 cut(s)	183, 723, 908, 1505, 1628
HpyCH4III	ACNGT	2 cut(s)	857, 2566
HpyCH4IV	ACGT	3 cut(s)	185, 1759, 2274
HpySE526I	ACGT	3 cut(s)	185, 1759, 2274
HspAI	GCGC	4 cut(s)	1104, 1387, 1744, 2310
Ksp22I	TGATCA	2 cut(s)	1828, 2227
LguI	GCTCTTC	1 cut(s)	1408
LmnI	GCTCC	5 cut(s)	62, 224, 232, 463, 1895
Lsp1109I	GCAGC	5 cut(s)	478, 529, 551, 1015, 2347
MabI	ACCWGGT	1 cut(s)	2191
MaeII	ACGT	3 cut(s)	185, 1759, 2274
MaeIII	GTNAC	1 cut(s)	2111
MbiI	CCGCTC	1 cut(s)	1089
MflI	RGATCY	6 cut(s)	175, 203, 682, 1859, 2378, 2417
MhlI	GDGCHC	5 cut(s)	137, 229, 414, 1848, 2184
MlyI	GAGTC	8 cut(s)	707, 1434, 1456, 1921, 2018, 2296, 2474, 2669
MmeI	TCCRAC	4 cut(s)	202, 648, 2313, 2334
Mph1103I	ATGCAT	1 cut(s)	1673
MroXI	GAANNNNTTC	1 cut(s)	1142
MseI	TTAA	6 cut(s)	477, 1269, 1895, 2489, 2504, 2583
MslI	CAYNNNNRTG	2 cut(s)	417, 735
MspA1I	CMGCKG	1 cut(s)	542
MspCI	CTTAAG	1 cut(s)	1894
MspI	CCGG	3 cut(s)	60, 439, 1747
MspR9I	CCNGG	5 cut(s)	1384, 1475, 1748, 1864, 2193
MssI	GTTTAAAC	1 cut(s)	2505
Mva1269I	GAATGC	3 cut(s)	1030, 1673, 1790
MvaI	CCWGG	4 cut(s)	1384, 1475, 1864, 2193
NciI	CCSGG	1 cut(s)	1748
NdeI	CATATG	1 cut(s)	2368
NheI	GCTAGC	1 cut(s)	1490
NlaIV	GGNNCC	6 cut(s)	754, 1085, 1846, 2139, 2259, 2380
NmeAIII	GCCGAG	3 cut(s)	797, 804, 1810
NmuCI	GTSAC	1 cut(s)	2111
NsiI	ATGCAT	1 cut(s)	1673
NspI	RCATGY	2 cut(s)	914, 1306
OliI	CACNNNNGTG	1 cut(s)	417
PciSI	GCTCTTC	1 cut(s)	1408
PctI	GAATGC	3 cut(s)	1030, 1673, 1790
PdmI	GAANNNNTTC	1 cut(s)	1142
PinAI	ACCGGT	1 cut(s)	438
PkrI	GCNGC	6 cut(s)	15, 468, 541, 544, 1030, 2337
PleI	GAGTC	8 cut(s)	707, 1434, 1456, 1921, 2017, 2296, 2473, 2669
PmeI	GTTTAAAC	1 cut(s)	2505
PpsI	GAGTC	8 cut(s)	707, 1434, 1456, 1921, 2017, 2296, 2473, 2669
Ppu21I	YACGTR	1 cut(s)	1760
PsiI	TTATAA	1 cut(s)	1731
Psp124BI	GAGCTC	1 cut(s)	229
Psp6I	CCWGG	4 cut(s)	1382, 1473, 1862, 2191
PspFI	CCCAGC	1 cut(s)	2460
PspGI	CCWGG	4 cut(s)	1382, 1473, 1862, 2191
PspN4I	GGNNCC	6 cut(s)	754, 1085, 1846, 2139, 2259, 2380
PspOMI	GGGCCC	1 cut(s)	1844
PspPI	GGNCC	7 cut(s)	24, 752, 1610, 1628, 1844, 1845, 2570
PstNI	CAGNNNCTG	1 cut(s)	2048
PsuI	RGATCY	6 cut(s)	175, 203, 682, 1859, 2378, 2417
PvuII	CAGCTG	1 cut(s)	542
RsaI	GTAC	3 cut(s)	1020, 1504, 2190
RsaNI	GTAC	3 cut(s)	1019, 1503, 2189
RseI	CAYNNNNRTG	2 cut(s)	417, 735
SacI	GAGCTC	1 cut(s)	229
SapI	GCTCTTC	1 cut(s)	1408
SaqAI	TTAA	6 cut(s)	477, 1269, 1895, 2489, 2504, 2583
SatI	GCNGC	6 cut(s)	14, 467, 540, 543, 1029, 2336
Sau96I	GGNCC	7 cut(s)	24, 752, 1610, 1628, 1844, 1845, 2570
SchI	GAGTC	8 cut(s)	707, 1434, 1456, 1921, 2018, 2296, 2474, 2669
ScrFI	CCNGG	5 cut(s)	1384, 1475, 1748, 1864, 2193
SduI	GDGCHC	5 cut(s)	137, 229, 414, 1848, 2184
SexAI	ACCWGGT	1 cut(s)	2191
SfcI	CTRYAG	4 cut(s)	165, 1614, 1855, 2104
SinI	GGWCC	4 cut(s)	24, 752, 1610, 1628
SmiMI	CAYNNNNRTG	2 cut(s)	417, 735
SmlI	CTYRAG	6 cut(s)	659, 929, 1059, 1894, 2348, 2392
SmoI	CTYRAG	6 cut(s)	659, 929, 1059, 1894, 2348, 2392
SsiI	CCGC	4 cut(s)	13, 1087, 1481, 1704
SstI	GAGCTC	1 cut(s)	229
StyD4I	CCNGG	5 cut(s)	1382, 1473, 1746, 1862, 2191
StyI	CCWWGG	2 cut(s)	507, 1009
TaaI	ACNGT	2 cut(s)	857, 2566
TaiI	ACGT	3 cut(s)	188, 1762, 2277
TaqI	TCGA	4 cut(s)	35, 583, 1691, 2268
TatI	WGTACW	1 cut(s)	1502
TauI	GCSGC	1 cut(s)	16
Tru1I	TTAA	6 cut(s)	477, 1269, 1895, 2489, 2504, 2583
Tru9I	TTAA	6 cut(s)	477, 1269, 1895, 2489, 2504, 2583
TscAI	CASTG	2 cut(s)	565, 1350
TseFI	GTSAC	1 cut(s)	2111
TseI	GCWGC	5 cut(s)	466, 539, 542, 1028, 2335
Tsp45I	GTSAC	1 cut(s)	2111
TspGWI	ACGGA	2 cut(s)	168, 2600
TspRI	CASTG	2 cut(s)	565, 1350
Vha464I	CTTAAG	1 cut(s)	1894
VpaK11BI	GGWCC	4 cut(s)	24, 752, 1610, 1628
XagI	CCTNNNNNAGG	2 cut(s)	1013, 1897
XapI	RAATTY	4 cut(s)	473, 644, 695, 1592
XbaI	TCTAGA	2 cut(s)	1178, 1187
XceI	RCATGY	2 cut(s)	914, 1306
XcmI	CCANNNNNNNNNTGG	1 cut(s)	764
XmaJI	CCTAGG	1 cut(s)	1009
XmiI	GTMKAC	1 cut(s)	907
XmnI	GAANNNNTTC	1 cut(s)	1142
Zsp2I	ATGCAT	1 cut(s)	1673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.