Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0003821

Physical Location & Seq

Genomic Coordinates Reverse (-)

15436716 .. 15441642

Gene Structure 4927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g12970.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2952 bp

ATGGAGAGCTTTCGGCCTCGGAGGTCTAAGGTGACGAGCATTGCTGACAGGAGCGCCGTCGGAGGACGGTTCGCCTCCGCTGAGCGAGCTCACAGAGGAGGAAACAGGCAGGTTCCGAAACAGAGACACTTTCGGAAATTGGCCTCTGATTCGAGTTCTTGCAGTAGTGGCTCTACCGGCGAAGACTCGTTCCCCTCTGAATTGGGCTGGAGATCTTCACAGCAAGGTGTTGGAACTCCAATAAAGAAGTTATTGGCTGAGGAGATGGTGAGAGAAACCGAACCCAGAAGGAGATCACCAAGCGTAATTGCCAAATTGATGGGTCTCGATGGGCTGCCACCTCAGCAGCCTGCTGATAGACAATCGAAAGGCATTTCAGAGAATTATCTTCAGAAGACAAGATCGGTAGAGAAAAACCACAGAAGCAGTATGTTTCATGACCGCCATTCGTCTAGGAAGAACTCAAGGGTGCAGCAGGAGTTTAAGGATGTGTTTGAAGTTAATGAACCTTCAAGGAGTTACTCATCTCGAGGAAGTGCTAACCCAAAGCTCAGTGATGCTGAAATGGCTTTTGTTCGACAGAAATTCATGGATGCAAAACGCCTTTCAACAGATGAGAGGCTACAGGATTCAAAGGAGTTCCATGATGCGCTTGAGGTGCTGGAATCTAACAAGGATATTCTATTGAAATTCCTTCAGCAACCAGACTCATTGTTCGCAAAACATCTCCATGATCTGCAAGGTGGTCCTCAATCCCTTTGTGGTCGCATAGTATCTATGAAGCCATCAGAAGCTCAAAAGTATGAAAACATTGACCTTGGCTTCACATCAGCGAGAGAGCAGAAGCATCGCTGTAAATCTCCTCAGAAGCACCGGGATTCTTTTTCTAGCCACTCTGACAGTAGACATGCTGGTCATAATCCTCTTAAATCATCACTAAACCGACCAGAAGTGAAAATTGAATCTGCCATTCATCCTACAAGGATAGTTGTTCTGAAACCAAACCTTGGGAAGGTGCTGAATGCTCCCAAAACATCACCTTGTTCTCCTCATGCTTCTATGTTAGATGGTAGCAAACACGCTGAATTTCTGAGCATTAGAAACAGGGAGGCAGAATCATGCGGAAGGAAAAACTTCCAAGATAATGATGGGCATCTGAGACACAAGTCTAGAGAATCTAGAGAAATTGCTAAGGAAATCACAAGGAAAATGAGGAATAACTTTAGCAGTAATTCTGTGCATCTTTCCTCCTCTGGTTTGAAAGGATATGCTGGTGATGAGAGTTCCTGTAGCATGTCTGAGAATGAATCTGCAAATGAGTCAGAGAGGATGTCGGTGGCTTCCAGGCATTCCTTTCATATAAGTAACCACTCCAGGCCTTCATCATCGTGCTCTACTGAATCATCTGTGAGTAGAGAGGCCAAGAAGAGGCTCTCAGAGAGGTGGAAACTGACACACAAGTCCCAAGAAGTGGGACCTGTTAGCAGGGGCAGCACACTTGGTGAAATGCTTGCTGTCCCAGACAAGGAAGCGCGAGCTGCTAATTTGAATGCCATGATTGGTGAGGCAGGATTCAGAGATACATTTTCTACTGAAGGGGGTGGACCTCTGGGTATCAGCAGTAGGGATGGTTGGAAGGATGGATGCATCAATAGTTTATCAAGATCAAAATCTCTTCCTTCTTCATCTAGTGTGTTTGGAAGTTTTAAAACAAGTATGCGGCGTGAAACTGTACATAGTGACAAGTATCCGATGCCAAAGGATACTGTGCCGCACAAAAGACACCGTATAGTAACTGGTAATCTTGATCTTAGAGAAGCTGTTTGCAAACAGTCTAGATCCAGCAATAAAACATCTTATTCGTCTCCCTCAAGTAGGGAAGCTATTGACATTTCACCTGAAACTCATACTACTGAGAATAAAGATAGAACTGACTTGGAAGAGAACAATCAAACCCAGAAGAATGTTGCATTTGAGTCACCACCTAGTAATGCTATGGATGCAAGTCCAGTTTCTGCAAATTTGGTGGATGTGGATGCATCCATGCATTCGGAAACTCCTGATGTGTTCCTTCCAGAATTATCATCTCATATGTCGGTAGAAGGCTATTCATATGGTGGACACCAGGATAATGTAATTCCACAGGAACCATCAATCAGGCCACCCGATGAACAGGCAGTCCCTTCTAACCACTCTGTACCTGGAATCGAATCTCCTGCAAGCTCCAAGGAGGCTGAGCAGCCCAGTCCGGTTTCAGTTCTGGAAGTTCCTTTTACTGATGATGTGTCATCTAGTTCTGAATGCTTTGAGAGTCTCAATGCTGACCTGCAAGGGCTTCGGATGCAGCTTAAGCTACTGAAGTTGGAGTCAGAACCATATGAAGAGGGACACATGGAAGTGTCGAGTGATGATGAAGTGGGTGATGGATCTACTGGGTTTTCAGATGCAAGAGGATTTTGTAAAGATGAAAAGAGCTGGGAGTCTGTATACTTGGCCAATACTTTAACTGAATCTGGTTTAAACAATGCTGATCCGGCTACCTTCTTGGCAATGTGGCACACCCCAGAATGTCCTGTGAATCCTTTACTATTTGAAGAACTGGAGAAGAAGTACTACGGTCAGACTTCTTGGCCAAAGCCCGAGAGGAAATTACTGTTCGATCGAATCAATTCAGGGCTCGTGGAGATGTTTGAGCAATTCATCGATCCACACCCATGGGTAAGGCCAGCGAGCAAAAGAATTGGTCCCAAGTGGATTAATACAAGTGCAGTCGAAGATGTTCTGTGCACGTTGCTAGCAAGCCAAGAAGAGAATGCGAATGAGGACAATCTGGAGAAAGAGCTGCAACGTGACTCGCTGTGGTTGGATTTTGGAGACGAAATAGACGTAATAGGTAGGGAAGTAGAGAGGAAGTTGATAGAAGAGCTAGTAGCAGAGGTAGTGGTAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378 VARLMGL

Protein Analysis

984

Amino Acids

109.54

Weight (kDa)

6.32

Isoelectric Point (pI)

65.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53540 AT3G53540
fragaria_vesca	FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620
malus_domestica	MD04G1118500.v1.1 MD12G1134100.v1.1 MD12G1134200.v1.1 MD12G1134300.v1.1 MD12G1134400.v1.1
prunus_persica	Prupe.6G247900_v2.0.a1 Prupe.6G247900_v2.0.a1
pyrus_communis	pycom04g10820 pycom12g12970
rosa_chinensis	RchiOBHm_Chr3g0467721
rosa_laevigata	RLG00000024478
rosa_multiflora	Rmu_co8048390.1_g000001 Rmu_co8092630.1_g000001 Rmu_co8309069.1_g000001 Rmu_sc0001793.1_g000010 Rmu_sc0013459.1_g000002
rosa_roxburghii	Rroxscaffold_6G00413480
rosa_rugosa	Rorug03G0089200 Rorug03G0089200
rosa_samantha	Rh3AG137700 Rh3BG159000 Rh3CG158900 Rh3DG159500
rosa_wichuraiana	Rw3G013040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	912, 1459
Acc36I	ACCTGC	2 cut(s)	100, 2334
AccB7I	CCANNNNNTGG	2 cut(s)	1007, 1471
AccI	GTMKAC	2 cut(s)	904, 2487
AccII	CGCG	1 cut(s)	1534
AciI	CCGC	5 cut(s)	78, 442, 1122, 1720, 1772
AclWI	GGATC	4 cut(s)	1833, 2434, 2525, 2699
AcoI	YGGCCR	2 cut(s)	2493, 2630
AcsI	RAATTY	4 cut(s)	584, 689, 1085, 2020
AcuI	CTGAAG	4 cut(s)	374, 680, 1614, 2378
AdeI	CACNNNGTG	1 cut(s)	1502
AfaI	GTAC	3 cut(s)	1734, 2199, 2612
AfiI	CCNNNNNNNGG	6 cut(s)	1007, 1012, 1428, 1471, 1525, 1875
AflII	CTTAAG	1 cut(s)	2348
AgsI	TTSAA	9 cut(s)	497, 513, 609, 633, 688, 962, 1261, 1549, 2594
AjnI	CCWGG	4 cut(s)	1343, 1373, 2124, 2200
AloI	GAACNNNNNNTCC	2 cut(s)	2163, 2195
Alw21I	GWGCWC	3 cut(s)	91, 1394, 2789
Alw26I	GTCTC	6 cut(s)	118, 329, 1153, 1869, 2318, 2868
Alw44I	GTGCAC	1 cut(s)	2785
AlwI	GGATC	4 cut(s)	1833, 2434, 2525, 2699
AlwNI	CAGNNNCTG	1 cut(s)	2015
Ama87I	CYCGRG	2 cut(s)	528, 2639
AoxI	GGCC	8 cut(s)	14, 141, 1376, 1419, 2159, 2493, 2630, 2723
ApaLI	GTGCAC	1 cut(s)	2785
ApeKI	GCWGC	8 cut(s)	334, 346, 472, 1491, 1538, 2239, 2344, 2842
ApoI	RAATTY	4 cut(s)	584, 689, 1085, 2020
ArsI	GACNNNNNNTTYG	2 cut(s)	698, 730
AseI	ATTAAT	1 cut(s)	2757
Asp700I	GAANNNNTTC	3 cut(s)	1133, 2668, 2778
AspLEI	GCGC	3 cut(s)	56, 652, 1534
AspS9I	GGNCC	4 cut(s)	746, 1475, 1604, 2744
AsuC2I	CCSGG	1 cut(s)	875
AsuNHI	GCTAGC	1 cut(s)	2794
AvaI	CYCGRG	2 cut(s)	528, 2639
AvaII	GGWCC	4 cut(s)	746, 1475, 1604, 2744
BaeGI	GKGCMC	1 cut(s)	2789
BalI	TGGCCA	2 cut(s)	2495, 2632
BanII	GRGCYC	2 cut(s)	91, 2679
BarI	GAAGNNNNNNTAC	2 cut(s)	2597, 2629
BauI	CACGAG	1 cut(s)	2678
BbsI	GAAGAC	2 cut(s)	189, 401
Bbv12I	GWGCWC	3 cut(s)	91, 1394, 2789
BbvCI	CCTCAGC	2 cut(s)	258, 342
BbvI	GCAGC	8 cut(s)	321, 358, 484, 1503, 1525, 2251, 2356, 2829
BceAI	ACGGC	1 cut(s)	41
BcgI	CGANNNNNNTGC	6 cut(s)	830, 864, 2198, 2232, 2318, 2352
BciT130I	CCWGG	4 cut(s)	1345, 1375, 2126, 2202
BciVI	GTATCC	2 cut(s)	1756, 1758
BcnI	CCSGG	1 cut(s)	875
BcoDI	GTCTC	6 cut(s)	118, 329, 1153, 1869, 2318, 2868
BfmI	CTRYAG	2 cut(s)	623, 1288
BfoI	RGCGCY	1 cut(s)	57
BfrI	CTTAAG	1 cut(s)	2348
BfuAI	ACCTGC	2 cut(s)	100, 2334
BfuI	GTATCC	2 cut(s)	1756, 1758
BglII	AGATCT	1 cut(s)	212
BlpI	GCTNAGC	2 cut(s)	81, 2235
BmcAI	AGTACT	1 cut(s)	2612
Bme1390I	CCNGG	5 cut(s)	875, 1345, 1375, 2126, 2202
Bme18I	GGWCC	4 cut(s)	746, 1475, 1604, 2744
BmeT110I	CYCGRG	2 cut(s)	528, 2639
BmgT120I	GGNCC	4 cut(s)	746, 1475, 1604, 2744
BmiI	GGNNCC	4 cut(s)	114, 1476, 2148, 2746
BmrFI	CCNGG	5 cut(s)	875, 1345, 1375, 2126, 2202
BmrI	ACTGGG	2 cut(s)	2238, 2442
BmtI	GCTAGC	1 cut(s)	2798
BmuI	ACTGGG	2 cut(s)	2238, 2442
BoxI	GACNNNNGTC	1 cut(s)	1165
BpiI	GAAGAC	2 cut(s)	189, 401
BpmI	CTGGAG	4 cut(s)	229, 1357, 2621, 2852
Bpu10I	CCTNAGC	3 cut(s)	258, 342, 1191
Bpu1102I	GCTNAGC	2 cut(s)	81, 2235
BpuEI	CTTGAG	3 cut(s)	448, 674, 1855
BpuMI	CCSGG	1 cut(s)	875
Bsa29I	ATCGAT	1 cut(s)	2703
BsaBI	GATNNNNATC	2 cut(s)	1152, 1669
BsaI	GGTCTC	1 cut(s)	329
BsaJI	CCNNGG	5 cut(s)	17, 817, 1006, 2226, 2714
BsaWI	WCCGGW	1 cut(s)	2248
BsaXI	ACNNNNNCTCC	2 cut(s)	2594, 2624
Bsc4I	CCNNNNNNNGG	6 cut(s)	1007, 1012, 1428, 1471, 1525, 1875
Bse118I	RCCGGY	1 cut(s)	176
Bse1I	ACTGG	5 cut(s)	1801, 2009, 2244, 2437, 2604
Bse3DI	GCAATG	2 cut(s)	39, 2556
Bse8I	GATNNNNATC	2 cut(s)	1152, 1669
BseBI	CCWGG	4 cut(s)	1345, 1375, 2126, 2202
BseCI	ATCGAT	1 cut(s)	2703
BseDI	CCNNGG	5 cut(s)	17, 817, 1006, 2226, 2714
BseJI	GATNNNNATC	2 cut(s)	1152, 1669
BseLI	CCNNNNNNNGG	6 cut(s)	1007, 1012, 1428, 1471, 1525, 1875
BseMI	GCAATG	2 cut(s)	39, 2556
BseNI	ACTGG	5 cut(s)	1801, 2009, 2244, 2437, 2604
BseRI	GAGGAG	5 cut(s)	111, 275, 852, 1038, 1240
BseSI	GKGCMC	1 cut(s)	2789
BseXI	GCAGC	8 cut(s)	321, 358, 484, 1503, 1525, 2251, 2356, 2829
BseYI	CCCAGC	1 cut(s)	2475
BsgI	GTGCAG	2 cut(s)	491, 2787
Bsh1236I	CGCG	1 cut(s)	1534
Bsh1285I	CGRYCG	1 cut(s)	2662
BshFI	GGCC	8 cut(s)	16, 143, 1378, 1421, 2161, 2495, 2632, 2725
BshVI	ATCGAT	1 cut(s)	2703
BsiEI	CGRYCG	1 cut(s)	2662
BsiHKAI	GWGCWC	3 cut(s)	91, 1394, 2789
BsiHKCI	CYCGRG	2 cut(s)	528, 2639
BsiSI	CCGG	4 cut(s)	177, 874, 2249, 2534
BslFI	GGGAC	6 cut(s)	1447, 1488, 1502, 2165, 2400, 2730
BslI	CCNNNNNNNGG	6 cut(s)	1007, 1012, 1428, 1471, 1525, 1875
BsmAI	GTCTC	6 cut(s)	118, 329, 1153, 1869, 2318, 2868
BsmBI	CGTCTC	2 cut(s)	1869, 2868
BsmFI	GGGAC	6 cut(s)	1447, 1488, 1502, 2165, 2400, 2730
BsmI	GAATGC	6 cut(s)	1027, 1348, 1555, 2047, 2306, 2818
BsnI	GGCC	8 cut(s)	16, 143, 1378, 1421, 2161, 2495, 2632, 2725
Bso31I	GGTCTC	1 cut(s)	329
BsoBI	CYCGRG	2 cut(s)	528, 2639
Bsp1286I	GDGCHC	4 cut(s)	91, 1394, 2679, 2789
Bsp1407I	TGTACA	1 cut(s)	1732
Bsp1720I	GCTNAGC	2 cut(s)	81, 2235
Bsp19I	CCATGG	1 cut(s)	2714
BspACI	CCGC	5 cut(s)	78, 442, 1122, 1720, 1772
BspANI	GGCC	8 cut(s)	16, 143, 1378, 1421, 2161, 2495, 2632, 2725
BspDI	ATCGAT	1 cut(s)	2703
BspFNI	CGCG	1 cut(s)	1534
BspHI	TCATGA	1 cut(s)	436
BspLI	GGNNCC	4 cut(s)	114, 1476, 2148, 2746
BspMI	ACCTGC	2 cut(s)	100, 2334
BspOI	GCTAGC	1 cut(s)	2798
BspPI	GGATC	4 cut(s)	1833, 2434, 2525, 2699
BspQI	GCTCTTC	1 cut(s)	2916
BspTI	CTTAAG	1 cut(s)	2348
BspTNI	GGTCTC	1 cut(s)	329
BsrDI	GCAATG	2 cut(s)	39, 2556
BsrFI	RCCGGY	1 cut(s)	176
BsrGI	TGTACA	1 cut(s)	1732
BsrI	ACTGG	5 cut(s)	1801, 2009, 2244, 2437, 2604
BssAI	RCCGGY	1 cut(s)	176
BssECI	CCNNGG	5 cut(s)	17, 817, 1006, 2226, 2714
BssNAI	GTATAC	1 cut(s)	2488
BssSI	CACGAG	1 cut(s)	2678
BssT1I	CCWWGG	4 cut(s)	817, 1006, 2226, 2714
Bst1107I	GTATAC	1 cut(s)	2488
Bst2BI	CACGAG	1 cut(s)	2678
Bst2UI	CCWGG	4 cut(s)	1345, 1375, 2126, 2202
Bst4CI	ACNGT	8 cut(s)	69, 902, 1732, 1768, 1787, 1833, 2618, 2655
Bst6I	CTCTTC	6 cut(s)	1421, 1680, 1935, 2376, 2802, 2916
BstAFI	CTTAAG	1 cut(s)	2348
BstAUI	TGTACA	1 cut(s)	1732
BstC8I	GCNNGC	9 cut(s)	87, 351, 1512, 1536, 2221, 2727, 2731, 2796, 2800
BstDSI	CCRYGG	1 cut(s)	2714
BstENI	CCTNNNNNAGG	2 cut(s)	1010, 1873
BstFNI	CGCG	1 cut(s)	1534
BstH2I	RGCGCY	1 cut(s)	57
BstHHI	GCGC	3 cut(s)	56, 652, 1534
BstMAI	GTCTC	6 cut(s)	118, 329, 1153, 1869, 2318, 2868
BstMCI	CGRYCG	1 cut(s)	2662
BstNI	CCWGG	4 cut(s)	1345, 1375, 2126, 2202
BstNSI	RCATGY	2 cut(s)	911, 1297
BstPAI	GACNNNNGTC	1 cut(s)	1165
BstSCI	CCNGG	5 cut(s)	873, 1343, 1373, 2124, 2200
BstSFI	CTRYAG	2 cut(s)	623, 1288
BstSLI	GKGCMC	1 cut(s)	2789
BstUI	CGCG	1 cut(s)	1534
BstV1I	GCAGC	8 cut(s)	321, 358, 484, 1503, 1525, 2251, 2356, 2829
BstV2I	GAAGAC	2 cut(s)	189, 401
BstX2I	RGATCY	3 cut(s)	212, 1838, 2426
BstXI	CCANNNNNNTGG	2 cut(s)	319, 2715
BstYI	RGATCY	3 cut(s)	212, 1838, 2426
BstZ17I	GTATAC	1 cut(s)	2488
Bsu15I	ATCGAT	1 cut(s)	2703
BsuI	GTATCC	2 cut(s)	1756, 1758
BsuRI	GGCC	8 cut(s)	16, 143, 1378, 1421, 2161, 2495, 2632, 2725
BsuTUI	ATCGAT	1 cut(s)	2703
BtgI	CCRYGG	1 cut(s)	2714
BtgZI	GCGATG	1 cut(s)	833
BtsIMutI	CAGTG	1 cut(s)	559
BveI	ACCTGC	2 cut(s)	100, 2334
Cac8I	GCNNGC	9 cut(s)	87, 351, 1512, 1536, 2221, 2727, 2731, 2796, 2800
CaiI	CAGNNNCTG	1 cut(s)	2015
CciI	TCATGA	1 cut(s)	436
CfoI	GCGC	3 cut(s)	56, 652, 1534
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	4 cut(s)	746, 1475, 1604, 2744
ClaI	ATCGAT	1 cut(s)	2703
Csp6I	GTAC	3 cut(s)	1733, 2198, 2611
CspCI	CAANNNNNGTGG	2 cut(s)	2007, 2042
CviQI	GTAC	3 cut(s)	1733, 2198, 2611
DraI	TTTAAA	2 cut(s)	1708, 2520
DraIII	CACNNNGTG	1 cut(s)	1502
DrdI	GACNNNNNNGTC	2 cut(s)	912, 1459
DseDI	GACNNNNNNGTC	2 cut(s)	912, 1459
EaeI	YGGCCR	2 cut(s)	2493, 2630
Eam1104I	CTCTTC	6 cut(s)	1421, 1680, 1935, 2376, 2802, 2916
EarI	CTCTTC	6 cut(s)	1421, 1680, 1935, 2376, 2802, 2916
Ecl136II	GAGCTC	1 cut(s)	89
Eco130I	CCWWGG	4 cut(s)	817, 1006, 2226, 2714
Eco147I	AGGCCT	1 cut(s)	1378
Eco24I	GRGCYC	2 cut(s)	91, 2679
Eco31I	GGTCTC	1 cut(s)	329
Eco47I	GGWCC	4 cut(s)	746, 1475, 1604, 2744
Eco53kI	GAGCTC	1 cut(s)	89
Eco57I	CTGAAG	4 cut(s)	374, 680, 1614, 2378
Eco88I	CYCGRG	2 cut(s)	528, 2639
EcoICRI	GAGCTC	1 cut(s)	89
EcoNI	CCTNNNNNAGG	2 cut(s)	1010, 1873
EcoO109I	RGGNCCY	1 cut(s)	1475
EcoRII	CCWGG	4 cut(s)	1343, 1373, 2124, 2200
EcoT14I	CCWWGG	4 cut(s)	817, 1006, 2226, 2714
EcoT22I	ATGCAT	3 cut(s)	1649, 2041, 2049
EcoT38I	GRGCYC	2 cut(s)	91, 2679
ErhI	CCWWGG	4 cut(s)	817, 1006, 2226, 2714
Esp3I	CGTCTC	2 cut(s)	1869, 2868
FaqI	GGGAC	6 cut(s)	1447, 1488, 1502, 2165, 2400, 2730
FauNDI	CATATG	3 cut(s)	2091, 2113, 2377
FblI	GTMKAC	2 cut(s)	904, 2487
FriOI	GRGCYC	2 cut(s)	91, 2679
GlaI	GCGC	3 cut(s)	55, 651, 1533
GsaI	CCCAGC	1 cut(s)	2479
GsuI	CTGGAG	4 cut(s)	229, 1357, 2621, 2852
HaeII	RGCGCY	1 cut(s)	57
HaeIII	GGCC	8 cut(s)	16, 143, 1378, 1421, 2161, 2495, 2632, 2725
HapII	CCGG	4 cut(s)	177, 874, 2249, 2534
HhaI	GCGC	3 cut(s)	56, 652, 1534
Hin6I	GCGC	3 cut(s)	54, 650, 1532
HinP1I	GCGC	3 cut(s)	54, 650, 1532
HpaII	CCGG	4 cut(s)	177, 874, 2249, 2534
Hpy166II	GTNNAC	5 cut(s)	905, 1604, 2120, 2488, 2787
Hpy8I	GTNNAC	5 cut(s)	905, 1604, 2120, 2488, 2787
Hpy99I	CGWCG	1 cut(s)	62
HpyCH4III	ACNGT	8 cut(s)	69, 902, 1732, 1768, 1787, 1833, 2618, 2655
HpyCH4IV	ACGT	3 cut(s)	2789, 2848, 2886
HpySE526I	ACGT	3 cut(s)	2789, 2848, 2886
HspAI	GCGC	3 cut(s)	54, 650, 1532
LguI	GCTCTTC	1 cut(s)	2916
LmnI	GCTCC	3 cut(s)	51, 1030, 2228
Lsp1109I	GCAGC	8 cut(s)	321, 358, 484, 1503, 1525, 2251, 2356, 2829
MaeII	ACGT	3 cut(s)	2789, 2848, 2886
MaeIII	GTNAC	7 cut(s)	31, 518, 1364, 1739, 1792, 1977, 2849
MflI	RGATCY	3 cut(s)	212, 1838, 2426
MhlI	GDGCHC	4 cut(s)	91, 1394, 2679, 2789
MlsI	TGGCCA	2 cut(s)	2495, 2632
MluNI	TGGCCA	2 cut(s)	2495, 2632
MlyI	GAGTC	8 cut(s)	179, 701, 1328, 1985, 2320, 2375, 2489, 2846
MmeI	TCCRAC	5 cut(s)	40, 211, 1613, 2343, 2844
Mox20I	TGGCCA	2 cut(s)	2495, 2632
Mph1103I	ATGCAT	3 cut(s)	1649, 2041, 2049
MroXI	GAANNNNTTC	3 cut(s)	1133, 2668, 2778
MscI	TGGCCA	2 cut(s)	2495, 2632
MseI	TTAA	8 cut(s)	483, 501, 927, 1707, 2349, 2504, 2519, 2757
MslI	CAYNNNNRTG	4 cut(s)	729, 1387, 2396, 2713
Msp20I	TGGCCA	2 cut(s)	2495, 2632
MspA1I	CMGCKG	1 cut(s)	80
MspCI	CTTAAG	1 cut(s)	2348
MspI	CCGG	4 cut(s)	177, 874, 2249, 2534
MspR9I	CCNGG	5 cut(s)	875, 1345, 1375, 2126, 2202
MssI	GTTTAAAC	1 cut(s)	2520
Mva1269I	GAATGC	6 cut(s)	1027, 1348, 1555, 2047, 2306, 2818
MvaI	CCWGG	4 cut(s)	1345, 1375, 2126, 2202
MvnI	CGCG	1 cut(s)	1534
NciI	CCSGG	1 cut(s)	875
NcoI	CCATGG	1 cut(s)	2714
NdeI	CATATG	3 cut(s)	2091, 2113, 2377
NheI	GCTAGC	1 cut(s)	2794
NlaIV	GGNNCC	4 cut(s)	114, 1476, 2148, 2746
NmuCI	GTSAC	4 cut(s)	31, 1739, 1977, 2849
NsiI	ATGCAT	3 cut(s)	1649, 2041, 2049
NspI	RCATGY	2 cut(s)	911, 1297
PaeR7I	CTCGAG	1 cut(s)	528
PagI	TCATGA	1 cut(s)	436
PceI	AGGCCT	1 cut(s)	1378
PciSI	GCTCTTC	1 cut(s)	2916
PcsI	WCGNNNNNNNCGW	1 cut(s)	2883
PctI	GAATGC	6 cut(s)	1027, 1348, 1555, 2047, 2306, 2818
PdmI	GAANNNNTTC	3 cut(s)	1133, 2668, 2778
PflMI	CCANNNNNTGG	2 cut(s)	1007, 1471
Ple19I	CGATCG	1 cut(s)	2662
PleI	GAGTC	8 cut(s)	179, 701, 1327, 1984, 2319, 2374, 2488, 2846
PmeI	GTTTAAAC	1 cut(s)	2520
PpsI	GAGTC	8 cut(s)	179, 701, 1327, 1984, 2319, 2374, 2488, 2846
PpuMI	RGGWCCY	1 cut(s)	1475
PshAI	GACNNNNGTC	1 cut(s)	1165
PshBI	ATTAAT	1 cut(s)	2757
Psp124BI	GAGCTC	1 cut(s)	91
Psp5II	RGGWCCY	1 cut(s)	1475
Psp6I	CCWGG	4 cut(s)	1343, 1373, 2124, 2200
PspFI	CCCAGC	1 cut(s)	2475
PspGI	CCWGG	4 cut(s)	1343, 1373, 2124, 2200
PspN4I	GGNNCC	4 cut(s)	114, 1476, 2148, 2746
PspPI	GGNCC	4 cut(s)	746, 1475, 1604, 2744
PspPPI	RGGWCCY	1 cut(s)	1475
PstNI	CAGNNNCTG	1 cut(s)	2015
PsuI	RGATCY	3 cut(s)	212, 1838, 2426
PvuI	CGATCG	1 cut(s)	2662
RsaI	GTAC	3 cut(s)	1734, 2199, 2612
RsaNI	GTAC	3 cut(s)	1733, 2198, 2611
RseI	CAYNNNNRTG	4 cut(s)	729, 1387, 2396, 2713
SacI	GAGCTC	1 cut(s)	91
SapI	GCTCTTC	1 cut(s)	2916
SaqAI	TTAA	8 cut(s)	483, 501, 927, 1707, 2349, 2504, 2519, 2757
Sau96I	GGNCC	4 cut(s)	746, 1475, 1604, 2744
ScaI	AGTACT	1 cut(s)	2612
SchI	GAGTC	8 cut(s)	179, 701, 1328, 1985, 2320, 2375, 2489, 2846
ScrFI	CCNGG	5 cut(s)	875, 1345, 1375, 2126, 2202
SduI	GDGCHC	4 cut(s)	91, 1394, 2679, 2789
SfcI	CTRYAG	2 cut(s)	623, 1288
Sfr274I	CTCGAG	1 cut(s)	528
SinI	GGWCC	4 cut(s)	746, 1475, 1604, 2744
SlaI	CTCGAG	1 cut(s)	528
SmiMI	CAYNNNNRTG	4 cut(s)	729, 1387, 2396, 2713
SmlI	CTYRAG	5 cut(s)	463, 528, 653, 1870, 2348
SmoI	CTYRAG	5 cut(s)	463, 528, 653, 1870, 2348
SseBI	AGGCCT	1 cut(s)	1378
SsiI	CCGC	5 cut(s)	78, 442, 1122, 1720, 1772
SstI	GAGCTC	1 cut(s)	91
StuI	AGGCCT	1 cut(s)	1378
StyD4I	CCNGG	5 cut(s)	873, 1343, 1373, 2124, 2200
StyI	CCWWGG	4 cut(s)	817, 1006, 2226, 2714
TaaI	ACNGT	8 cut(s)	69, 902, 1732, 1768, 1787, 1833, 2618, 2655
TaiI	ACGT	3 cut(s)	2792, 2851, 2889
TatI	WGTACW	2 cut(s)	1732, 2610
TauI	GCSGC	2 cut(s)	1723, 1774
Tru1I	TTAA	8 cut(s)	483, 501, 927, 1707, 2349, 2504, 2519, 2757
Tru9I	TTAA	8 cut(s)	483, 501, 927, 1707, 2349, 2504, 2519, 2757
TscAI	CASTG	1 cut(s)	559
TseFI	GTSAC	4 cut(s)	31, 1739, 1977, 2849
TseI	GCWGC	8 cut(s)	334, 346, 472, 1491, 1538, 2239, 2344, 2842
Tsp45I	GTSAC	4 cut(s)	31, 1739, 1977, 2849
TspRI	CASTG	1 cut(s)	559
Van91I	CCANNNNNTGG	2 cut(s)	1007, 1471
Vha464I	CTTAAG	1 cut(s)	2348
VneI	GTGCAC	1 cut(s)	2785
VpaK11BI	GGWCC	4 cut(s)	746, 1475, 1604, 2744
VspI	ATTAAT	1 cut(s)	2757
XagI	CCTNNNNNAGG	2 cut(s)	1010, 1873
XapI	RAATTY	4 cut(s)	584, 689, 1085, 2020
XbaI	TCTAGA	3 cut(s)	1169, 1178, 1835
XceI	RCATGY	2 cut(s)	911, 1297
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1145, 2198
XhoI	CTCGAG	1 cut(s)	528
XmiI	GTMKAC	2 cut(s)	904, 2487
XmnI	GAANNNNTTC	3 cut(s)	1133, 2668, 2778
ZrmI	AGTACT	1 cut(s)	2612
Zsp2I	ATGCAT	3 cut(s)	1649, 2041, 2049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.