Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0003821

Physical Location & Seq

Genomic Coordinates Reverse (-)

13591764 .. 13596550

Gene Structure 4787 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g10820.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2829 bp

ATGGAGAACTTGCGGCCTCGGAGGTCTAAGGTGACCAGCATTGCTGATAGGAGCTTCGAAGGAGGACGACTCGCCTCCTCCGCTGAGCGAGCTTACAGAGGAAACAGGCAGGTTCAGAAACAGAAACACATTCCGAAATTGGCCTCTGATTCGAGTTCTTGCAGTAGTGGCTCTACCGGCGACGACTCGTTCCCCTTTGAATTGGGCTGGAGATCTTCACAGCAAGCTGTTGGAACTCCAATAAAGAAGTTATTAGCTGAGGAGATGGTGAGAGAAATTGAACCCAGGAGGAGATCACCAAGCGTAATTGCCAAATTGATGGGTCTTGATGGGCTGCCACCTCAGCAGCCTGCTCATAGACAACCAAAAGGCATTTCGGAGAATTATTTTCAGAAGTCAAGATCGGAAGAGAAAGAGCACAGAAACAGTATGTCTTATGAACGCCGCTTGTCCAGGAAGAACTCAAGGGTGCAGCAAGAATTCAAGGATGTGTTTGAAGTTTATGAAACTTCAAAGGGTTACTCATCACGAGGAACTGCTAACACAAAGCTCAGTGATGCTGAAATGGCTTTTGTTCGACAGAAGTTCATGGATGCAAAACGCCTTTCAACTGATGAGAGGCTACAGGATTCAAAGGAATTCCATGATGTGCTTGAGGTGCTGGAATCTAACAAGGATCTTCTATTGAAATTCCTTCAGCAACCAGACTCATTGTTTGCTAAACATCTGCATGATCTGCATGGTGTTCCTCAATCCCGTTGTGGTCGCATGGCATCTATGAAGTCACCAGAGGCTCAGAAGTATCAAAACATTGACCTTGGTTTCACATCAGCGAGAGAGCGGAAGCGTTGCACTGAATCTCCGCAGAAGCATTGCGATTCTTTTCCTAGCCATTCTGACAGTAGACATGCTGGTCATAATCCTCCTAAATCATCTGTAAGCCGACCGGAAGTGAAAATTGAATCTGCCATTCATCCTACAAGGATAGTTGTTCTCAAACCAAACCTTGGGAAGGTGCTGAATGCTACCAAAACATCACCATGTTCTCCTCATGCTTCTATGTTAGATGGAAGCAAACACACTGAATTTCCGAGCATTAGAGATAGGGAGGCAGAATCACGGGGAAGGAAAAATGTCCAAGATAATGATGGGCATCTGAGGCACAAGTCCAGAGAATCTAGAGAAGTTGCCAAGGAAATCACAAGGAAAATGAGGAATAAATTTTGCAGTAATTCTGTGCGTCTTTCCTCCTCTGGTTTGAAAGGATATGCTGGCGATGATAGTTGTTGTAGCATGTCTGAGAATGAATCTGCAAACGAGTCAGAGGTGATGTCGGTGTCTTCCAGGCATTCATTTCACATAAGTAACCACTCCAGGCCTTCAACATCATGCTCTACTGAATCATCCGTGAGTAGAGAGGCCAAGAAGAGGCTCTCGGAGAGGTGGAAGATGACTCACAAGTCCCAAGAAGTGGGACCTGTTAGCAGGGGCAGCACACTTGGTGAAATGCTTGCTGTCCCAGACGAGGAAACGCGAGCTGCTAATTTGAATACCATGGTTGGCGAGGCAGGATTCAGAGATACGTTTTCTACTGAAGATGCACCTGCACGGTGGGGTGGACCTCTGGGTATCAGCAGTAAGGATGGTTGGAAGGATGGATGCATCAATAGTTTATCAAGATCAAAATCTCTTCCTTCTTCATCTACTGCGTTTGCAAGTTTTAAAACAAGTATGTGGTGTGAAACTGTACATGATGACAAGTATCTGATGCCAAAGGAGACAGTCCTGCACGAAAGACATTGCACAGTAACTGGTCATCTTGATCTTAGAGAAGGTGGCCATAAACTGTCTAGATCCGGCAACAAAATTTCATATTTGTCTCACACCTTAAGTAGGGAAGCTATTGACATTTCACCTGAAACTCATACTACTGAGAATAAAGATAGAACTGACTTTGAAGGGAACAATCAAACCCAGCAGACTGTTGCAGTCTTTGAGTCACCACCTCGTAATGCTTTGGATACAAGTCCAGTTTCTGCAAATTTGGTGGATGTGGATGCATCCATGCCTTGTGAAACTCCTGATGTGTTACTTCCAGAATTATCATCTCATATGTCAGCAGAAAGTGATTCTTCTGGTAGTCACCAAGATAACCTAATTCCCCAGGAACCATCAATCAGGCCCCCTGATGAACAGGCAGTCCCCTCTAACCATTCCGTGCCTGGAATCGAATCTCCTGCAAGCTCCAAGGAAGCTGAGCAGCCCAGTCCGGTTTCAGTTCTGGAAGTTCCTTTTACTGATGATGTGTCATCTAGTTCTGAATGCTTTGAGAGTGTCAATGCTGACCTGCAAGGGCTTCGGATGCAGCTTCAGCTACTCAAGTTGGAATCAGAACCACACATGGAAGTCTCGAGTGATGAAGACGGTGATGGATCTACAGCGTGTTCAGATGCAAGAGGGCTTTGCAAAGATGAAGAGAGCTGGGAATCTGTATACTTGGCCGATATTTTAACTGAATCTGGTTTAAGCAACGCTGGTCCGGCTACCTTCTTGGCAATATGTCACACTCCAGAATCTCCTATGTGTCCTTTACTATTCGAAGAACTGGAGAAGAAGTACTACGGTCAGACTTCTTGGCCAAAGCCCGAGAGAAAGTTACTGTTTGACCGAGTAAATTCAGGGCTCCTGGAGATGTTTGAGCAATTCACTGATCCACACCCATGGGCGAGGCCTGCAAACAAAAGAATTGGTCCCAAGTGGATTAATACAAGTGCACTTGAAGATCGATCTTCACAAGTTTCTAGCAAGCCAAGAAGAGAATGCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378 VARLMGL

Protein Analysis

943

Amino Acids

104.93

Weight (kDa)

6.46

Isoelectric Point (pI)

67.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53540 AT3G53540
fragaria_vesca	FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620
malus_domestica	MD04G1118500.v1.1 MD12G1134100.v1.1 MD12G1134200.v1.1 MD12G1134300.v1.1 MD12G1134400.v1.1
prunus_persica	Prupe.6G247900_v2.0.a1 Prupe.6G247900_v2.0.a1
pyrus_communis	pycom04g10820 pycom12g12970
rosa_chinensis	RchiOBHm_Chr3g0467721
rosa_laevigata	RLG00000024478
rosa_multiflora	Rmu_co8048390.1_g000001 Rmu_co8092630.1_g000001 Rmu_co8309069.1_g000001 Rmu_sc0001793.1_g000010 Rmu_sc0013459.1_g000002
rosa_roxburghii	Rroxscaffold_6G00413480
rosa_rugosa	Rorug03G0089200 Rorug03G0089200
rosa_samantha	Rh3AG137700 Rh3BG159000 Rh3CG158900 Rh3DG159500
rosa_wichuraiana	Rw3G013040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1612
AasI	GACNNNNNNGTC	2 cut(s)	912, 1459
Acc36I	ACCTGC	3 cut(s)	100, 1612, 2355
AccB7I	CCANNNNNTGG	2 cut(s)	1007, 1471
AccBSI	CCGCTC	1 cut(s)	841
AccI	GTMKAC	2 cut(s)	904, 2493
AccII	CGCG	1 cut(s)	1534
AciI	CCGC	5 cut(s)	13, 81, 445, 841, 863
AclWI	GGATC	4 cut(s)	684, 1848, 2440, 2705
AcoI	YGGCCR	3 cut(s)	1837, 2499, 2636
AcsI	RAATTY	8 cut(s)	479, 638, 689, 1085, 1220, 1866, 2041, 2674
AcuI	CTGAAG	3 cut(s)	680, 1614, 2354
AdeI	CACNNNGTG	1 cut(s)	1502
AfaI	GTAC	2 cut(s)	1749, 2618
AfiI	CCNNNNNNNGG	6 cut(s)	1007, 1012, 1428, 1471, 1525, 1893
AflII	CTTAAG	1 cut(s)	1888
AjnI	CCWGG	7 cut(s)	284, 452, 1343, 1373, 2163, 2221, 2685
AjuI	GAANNNNNNNTTGG	2 cut(s)	358, 390
AloI	GAACNNNNNNTCC	2 cut(s)	2184, 2216
Alw21I	GWGCWC	2 cut(s)	420, 2776
Alw26I	GTCTC	3 cut(s)	1772, 1884, 2413
Alw44I	GTGCAC	1 cut(s)	2772
AlwI	GGATC	4 cut(s)	684, 1848, 2440, 2705
AlwNI	CAGNNNCTG	2 cut(s)	1811, 2036
Ama87I	CYCGRG	2 cut(s)	2410, 2645
AoxI	GGCC	9 cut(s)	14, 141, 1376, 1419, 1837, 2180, 2499, 2636, 2729
ApaLI	GTGCAC	1 cut(s)	2772
ApeKI	GCWGC	7 cut(s)	334, 346, 472, 1491, 1538, 2260, 2365
ApoI	RAATTY	8 cut(s)	479, 638, 689, 1085, 1220, 1866, 2041, 2674
ArsI	GACNNNNNNTTYG	2 cut(s)	698, 730
AseI	ATTAAT	1 cut(s)	2763
AspS9I	GGNCC	5 cut(s)	1475, 1619, 2181, 2537, 2750
AsuII	TTCGAA	2 cut(s)	57, 2598
AvaI	CYCGRG	2 cut(s)	2410, 2645
AvaII	GGWCC	4 cut(s)	1475, 1619, 2537, 2750
BaeGI	GKGCMC	1 cut(s)	2776
BalI	TGGCCA	2 cut(s)	1839, 2638
BanII	GRGCYC	1 cut(s)	2685
BarI	GAAGNNNNNNTAC	2 cut(s)	2603, 2635
BauI	CACGAG	1 cut(s)	528
BbsI	GAAGAC	2 cut(s)	1332, 2427
Bbv12I	GWGCWC	2 cut(s)	420, 2776
BbvCI	CCTCAGC	2 cut(s)	258, 342
BbvI	GCAGC	7 cut(s)	321, 358, 484, 1503, 1525, 2272, 2377
BccI	CCATC	9 cut(s)	259, 313, 323, 1061, 1142, 1637, 1649, 2179, 2423
BcgI	CGANNNNNNTGC	4 cut(s)	2219, 2253, 2339, 2373
BciT130I	CCWGG	7 cut(s)	286, 454, 1345, 1375, 2165, 2223, 2687
BciVI	GTATCC	1 cut(s)	2014
BcoDI	GTCTC	3 cut(s)	1772, 1884, 2413
BfaI	CTAG	5 cut(s)	888, 1179, 1851, 2313, 2802
BfmI	CTRYAG	2 cut(s)	623, 2436
BfrI	CTTAAG	1 cut(s)	1888
BfuAI	ACCTGC	3 cut(s)	100, 1612, 2355
BfuI	GTATCC	1 cut(s)	2014
BglII	AGATCT	1 cut(s)	212
BisI	GCNGC	9 cut(s)	14, 335, 347, 445, 473, 1492, 1539, 2261, 2366
BlpI	GCTNAGC	2 cut(s)	84, 2256
BlsI	GCNGC	9 cut(s)	15, 336, 348, 446, 474, 1493, 1540, 2262, 2367
BmcAI	AGTACT	1 cut(s)	2618
Bme1390I	CCNGG	7 cut(s)	286, 454, 1345, 1375, 2165, 2223, 2687
Bme18I	GGWCC	4 cut(s)	1475, 1619, 2537, 2750
BmeT110I	CYCGRG	2 cut(s)	2410, 2645
BmgT120I	GGNCC	5 cut(s)	1475, 1619, 2181, 2537, 2750
BmiI	GGNNCC	5 cut(s)	1476, 2169, 2183, 2684, 2752
BmrFI	CCNGG	7 cut(s)	286, 454, 1345, 1375, 2165, 2223, 2687
BmrI	ACTGGG	1 cut(s)	2259
BmuI	ACTGGG	1 cut(s)	2259
BpiI	GAAGAC	2 cut(s)	1332, 2427
BplI	GAGNNNNNCTC	2 cut(s)	54, 86
BpmI	CTGGAG	5 cut(s)	229, 1357, 2553, 2627, 2708
Bpu10I	CCTNAGC	2 cut(s)	258, 342
Bpu1102I	GCTNAGC	2 cut(s)	84, 2256
Bpu14I	TTCGAA	2 cut(s)	57, 2598
BpuEI	CTTGAG	3 cut(s)	448, 674, 2363
Bsa29I	ATCGAT	1 cut(s)	2785
BsaBI	GATNNNNATC	2 cut(s)	1152, 1684
BsaJI	CCNNGG	9 cut(s)	17, 284, 817, 1006, 1191, 1554, 2163, 2247, 2720
BsaWI	WCCGGW	2 cut(s)	946, 2269
BsaXI	ACNNNNNCTCC	4 cut(s)	844, 874, 2600, 2630
Bsc4I	CCNNNNNNNGG	6 cut(s)	1007, 1012, 1428, 1471, 1525, 1893
Bse118I	RCCGGY	1 cut(s)	176
Bse1I	ACTGG	4 cut(s)	1816, 2030, 2265, 2610
Bse3DI	GCAATG	3 cut(s)	39, 871, 1798
Bse8I	GATNNNNATC	2 cut(s)	1152, 1684
BseBI	CCWGG	7 cut(s)	286, 454, 1345, 1375, 2165, 2223, 2687
BseCI	ATCGAT	1 cut(s)	2785
BseDI	CCNNGG	9 cut(s)	17, 284, 817, 1006, 1191, 1554, 2163, 2247, 2720
BseJI	GATNNNNATC	2 cut(s)	1152, 1684
BseLI	CCNNNNNNNGG	6 cut(s)	1007, 1012, 1428, 1471, 1525, 1893
BseMI	GCAATG	3 cut(s)	39, 871, 1798
BseMII	CTCAG	9 cut(s)	75, 249, 356, 565, 809, 1148, 1290, 1923, 2247
BseNI	ACTGG	4 cut(s)	1816, 2030, 2265, 2610
BseRI	GAGGAG	5 cut(s)	67, 275, 304, 1038, 1240
BseSI	GKGCMC	1 cut(s)	2776
BseXI	GCAGC	7 cut(s)	321, 358, 484, 1503, 1525, 2272, 2377
BseYI	CCCAGC	2 cut(s)	1974, 2481
BsgI	GTGCAG	3 cut(s)	491, 1590, 1772
Bsh1236I	CGCG	1 cut(s)	1534
Bsh1285I	CGRYCG	1 cut(s)	947
BshFI	GGCC	9 cut(s)	16, 143, 1378, 1421, 1839, 2182, 2501, 2638, 2731
BshVI	ATCGAT	1 cut(s)	2785
BsiEI	CGRYCG	1 cut(s)	947
BsiHKAI	GWGCWC	2 cut(s)	420, 2776
BsiHKCI	CYCGRG	2 cut(s)	2410, 2645
BsiSI	CCGG	5 cut(s)	177, 947, 1857, 2270, 2540
BslFI	GGGAC	5 cut(s)	1447, 1488, 1502, 2186, 2736
BslI	CCNNNNNNNGG	6 cut(s)	1007, 1012, 1428, 1471, 1525, 1893
BsmAI	GTCTC	3 cut(s)	1772, 1884, 2413
BsmFI	GGGAC	5 cut(s)	1447, 1488, 1502, 2186, 2736
BsmI	GAATGC	4 cut(s)	1027, 1348, 2327, 2825
BsnI	GGCC	9 cut(s)	16, 143, 1378, 1421, 1839, 2182, 2501, 2638, 2731
BsoBI	CYCGRG	2 cut(s)	2410, 2645
Bsp119I	TTCGAA	2 cut(s)	57, 2598
Bsp1286I	GDGCHC	3 cut(s)	420, 2685, 2776
Bsp1407I	TGTACA	1 cut(s)	1747
Bsp1720I	GCTNAGC	2 cut(s)	84, 2256
Bsp19I	CCATGG	2 cut(s)	1554, 2720
BspACI	CCGC	5 cut(s)	13, 81, 445, 841, 863
BspANI	GGCC	9 cut(s)	16, 143, 1378, 1421, 1839, 2182, 2501, 2638, 2731
BspCNI	CTCAG	9 cut(s)	76, 250, 355, 564, 808, 1149, 1291, 1924, 2248
BspDI	ATCGAT	1 cut(s)	2785
BspFNI	CGCG	1 cut(s)	1534
BspLI	GGNNCC	5 cut(s)	1476, 2169, 2183, 2684, 2752
BspMI	ACCTGC	3 cut(s)	100, 1612, 2355
BspPI	GGATC	4 cut(s)	684, 1848, 2440, 2705
BspT104I	TTCGAA	2 cut(s)	57, 2598
BspTI	CTTAAG	1 cut(s)	1888
BsrBI	CCGCTC	1 cut(s)	841
BsrDI	GCAATG	3 cut(s)	39, 871, 1798
BsrFI	RCCGGY	1 cut(s)	176
BsrGI	TGTACA	1 cut(s)	1747
BsrI	ACTGG	4 cut(s)	1816, 2030, 2265, 2610
BssAI	RCCGGY	1 cut(s)	176
BssECI	CCNNGG	9 cut(s)	17, 284, 817, 1006, 1191, 1554, 2163, 2247, 2720
BssNAI	GTATAC	1 cut(s)	2494
BssSI	CACGAG	1 cut(s)	528
BssT1I	CCWWGG	6 cut(s)	817, 1006, 1191, 1554, 2247, 2720
Bst1107I	GTATAC	1 cut(s)	2494
Bst2BI	CACGAG	1 cut(s)	528
Bst2UI	CCWGG	7 cut(s)	286, 454, 1345, 1375, 2165, 2223, 2687
Bst6I	CTCTTC	5 cut(s)	402, 1421, 1695, 2469, 2809
BstAFI	CTTAAG	1 cut(s)	1888
BstAPI	GCANNNNNTGC	1 cut(s)	736
BstAUI	TGTACA	1 cut(s)	1747
BstBI	TTCGAA	2 cut(s)	57, 2598
BstC8I	GCNNGC	9 cut(s)	90, 225, 351, 1273, 1512, 1536, 2242, 2733, 2807
BstDSI	CCRYGG	2 cut(s)	1554, 2720
BstEII	GGTNACC	1 cut(s)	31
BstENI	CCTNNNNNAGG	2 cut(s)	1010, 1891
BstFNI	CGCG	1 cut(s)	1534
BstMAI	GTCTC	3 cut(s)	1772, 1884, 2413
BstMCI	CGRYCG	1 cut(s)	947
BstNI	CCWGG	7 cut(s)	286, 454, 1345, 1375, 2165, 2223, 2687
BstNSI	RCATGY	2 cut(s)	911, 1297
BstPI	GGTNACC	1 cut(s)	31
BstSCI	CCNGG	7 cut(s)	284, 452, 1343, 1373, 2163, 2221, 2685
BstSFI	CTRYAG	2 cut(s)	623, 2436
BstSLI	GKGCMC	1 cut(s)	2776
BstUI	CGCG	1 cut(s)	1534
BstV1I	GCAGC	7 cut(s)	321, 358, 484, 1503, 1525, 2272, 2377
BstV2I	GAAGAC	2 cut(s)	1332, 2427
BstX2I	RGATCY	4 cut(s)	212, 676, 1853, 2432
BstXI	CCANNNNNNTGG	2 cut(s)	319, 2721
BstYI	RGATCY	4 cut(s)	212, 676, 1853, 2432
BstZ17I	GTATAC	1 cut(s)	2494
Bsu15I	ATCGAT	1 cut(s)	2785
BsuI	GTATCC	1 cut(s)	2014
BsuRI	GGCC	9 cut(s)	16, 143, 1378, 1421, 1839, 2182, 2501, 2638, 2731
BsuTUI	ATCGAT	1 cut(s)	2785
BtgI	CCRYGG	2 cut(s)	1554, 2720
BtgZI	GCGATG	1 cut(s)	1290
BtsIMutI	CAGTG	4 cut(s)	559, 852, 1080, 2706
BveI	ACCTGC	3 cut(s)	100, 1612, 2355
Cac8I	GCNNGC	9 cut(s)	90, 225, 351, 1273, 1512, 1536, 2242, 2733, 2807
CaiI	CAGNNNCTG	2 cut(s)	1811, 2036
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	5 cut(s)	1475, 1619, 2181, 2537, 2750
ClaI	ATCGAT	1 cut(s)	2785
CseI	GACGC	1 cut(s)	1229
Csp6I	GTAC	2 cut(s)	1748, 2617
CspCI	CAANNNNNGTGG	2 cut(s)	2028, 2063
CviQI	GTAC	2 cut(s)	1748, 2617
DraI	TTTAAA	1 cut(s)	1723
DraIII	CACNNNGTG	1 cut(s)	1502
DrdI	GACNNNNNNGTC	2 cut(s)	912, 1459
DseDI	GACNNNNNNGTC	2 cut(s)	912, 1459
EaeI	YGGCCR	3 cut(s)	1837, 2499, 2636
Eam1104I	CTCTTC	5 cut(s)	402, 1421, 1695, 2469, 2809
EarI	CTCTTC	5 cut(s)	402, 1421, 1695, 2469, 2809
Eco130I	CCWWGG	6 cut(s)	817, 1006, 1191, 1554, 2247, 2720
Eco147I	AGGCCT	2 cut(s)	1378, 2731
Eco24I	GRGCYC	1 cut(s)	2685
Eco47I	GGWCC	4 cut(s)	1475, 1619, 2537, 2750
Eco57I	CTGAAG	3 cut(s)	680, 1614, 2354
Eco88I	CYCGRG	2 cut(s)	2410, 2645
Eco91I	GGTNACC	1 cut(s)	31
EcoNI	CCTNNNNNAGG	2 cut(s)	1010, 1891
EcoO109I	RGGNCCY	2 cut(s)	1475, 2181
EcoO65I	GGTNACC	1 cut(s)	31
EcoRI	GAATTC	2 cut(s)	479, 638
EcoRII	CCWGG	7 cut(s)	284, 452, 1343, 1373, 2163, 2221, 2685
EcoT14I	CCWWGG	6 cut(s)	817, 1006, 1191, 1554, 2247, 2720
EcoT22I	ATGCAT	2 cut(s)	1664, 2062
EcoT38I	GRGCYC	1 cut(s)	2685
ErhI	CCWWGG	6 cut(s)	817, 1006, 1191, 1554, 2247, 2720
FalI	AAGNNNNNCTT	2 cut(s)	2116, 2148
FaqI	GGGAC	5 cut(s)	1447, 1488, 1502, 2186, 2736
FauNDI	CATATG	1 cut(s)	2112
FblI	GTMKAC	2 cut(s)	904, 2493
Fnu4HI	GCNGC	9 cut(s)	14, 335, 347, 445, 473, 1492, 1539, 2261, 2366
FriOI	GRGCYC	1 cut(s)	2685
Fsp4HI	GCNGC	9 cut(s)	14, 335, 347, 445, 473, 1492, 1539, 2261, 2366
FspBI	CTAG	5 cut(s)	888, 1179, 1851, 2313, 2802
GluI	GCNGC	9 cut(s)	14, 335, 347, 445, 473, 1492, 1539, 2261, 2366
GsaI	CCCAGC	2 cut(s)	1978, 2485
GsuI	CTGGAG	5 cut(s)	229, 1357, 2553, 2627, 2708
HaeIII	GGCC	9 cut(s)	16, 143, 1378, 1421, 1839, 2182, 2501, 2638, 2731
HapII	CCGG	5 cut(s)	177, 947, 1857, 2270, 2540
HgaI	GACGC	1 cut(s)	1229
HpaII	CCGG	5 cut(s)	177, 947, 1857, 2270, 2540
Hpy166II	GTNNAC	4 cut(s)	905, 1619, 2494, 2774
Hpy8I	GTNNAC	4 cut(s)	905, 1619, 2494, 2774
Hpy99I	CGWCG	1 cut(s)	185
HpyCH4IV	ACGT	1 cut(s)	1583
HpySE526I	ACGT	1 cut(s)	1583
LmnI	GCTCC	3 cut(s)	51, 2249, 2688
Lsp1109I	GCAGC	7 cut(s)	321, 358, 484, 1503, 1525, 2272, 2377
MaeI	CTAG	5 cut(s)	888, 1179, 1851, 2313, 2802
MaeII	ACGT	1 cut(s)	1583
MbiI	CCGCTC	1 cut(s)	841
MflI	RGATCY	4 cut(s)	212, 676, 1853, 2432
MhlI	GDGCHC	3 cut(s)	420, 2685, 2776
MlsI	TGGCCA	2 cut(s)	1839, 2638
MluNI	TGGCCA	2 cut(s)	1839, 2638
MlyI	GAGTC	6 cut(s)	63, 179, 701, 1328, 1447, 2006
MmeI	TCCRAC	3 cut(s)	211, 1628, 2364
Mox20I	TGGCCA	2 cut(s)	1839, 2638
Mph1103I	ATGCAT	2 cut(s)	1664, 2062
MscI	TGGCCA	2 cut(s)	1839, 2638
MseI	TTAA	5 cut(s)	1722, 1889, 2510, 2525, 2763
MslI	CAYNNNNRTG	3 cut(s)	729, 1039, 2719
Msp20I	TGGCCA	2 cut(s)	1839, 2638
MspA1I	CMGCKG	1 cut(s)	83
MspCI	CTTAAG	1 cut(s)	1888
MspI	CCGG	5 cut(s)	177, 947, 1857, 2270, 2540
MspR9I	CCNGG	7 cut(s)	286, 454, 1345, 1375, 2165, 2223, 2687
Mva1269I	GAATGC	4 cut(s)	1027, 1348, 2327, 2825
MvaI	CCWGG	7 cut(s)	286, 454, 1345, 1375, 2165, 2223, 2687
MvnI	CGCG	1 cut(s)	1534
NcoI	CCATGG	2 cut(s)	1554, 2720
NdeI	CATATG	1 cut(s)	2112
NlaIV	GGNNCC	5 cut(s)	1476, 2169, 2183, 2684, 2752
NmuCI	GTSAC	5 cut(s)	31, 783, 1998, 2141, 2561
NsiI	ATGCAT	2 cut(s)	1664, 2062
NspI	RCATGY	2 cut(s)	911, 1297
NspV	TTCGAA	2 cut(s)	57, 2598
PaeR7I	CTCGAG	1 cut(s)	2410
PaqCI	CACCTGC	1 cut(s)	1612
PceI	AGGCCT	2 cut(s)	1378, 2731
PctI	GAATGC	4 cut(s)	1027, 1348, 2327, 2825
PflMI	CCANNNNNTGG	2 cut(s)	1007, 1471
PfoI	TCCNGGA	2 cut(s)	452, 2685
PkrI	GCNGC	9 cut(s)	15, 336, 348, 446, 474, 1493, 1540, 2262, 2367
PleI	GAGTC	6 cut(s)	63, 179, 701, 1327, 1447, 2005
PpsI	GAGTC	6 cut(s)	63, 179, 701, 1327, 1447, 2005
PpuMI	RGGWCCY	1 cut(s)	1475
PshBI	ATTAAT	1 cut(s)	2763
Psp5II	RGGWCCY	1 cut(s)	1475
Psp6I	CCWGG	7 cut(s)	284, 452, 1343, 1373, 2163, 2221, 2685
PspEI	GGTNACC	1 cut(s)	31
PspFI	CCCAGC	2 cut(s)	1974, 2481
PspGI	CCWGG	7 cut(s)	284, 452, 1343, 1373, 2163, 2221, 2685
PspN4I	GGNNCC	5 cut(s)	1476, 2169, 2183, 2684, 2752
PspPI	GGNCC	5 cut(s)	1475, 1619, 2181, 2537, 2750
PspPPI	RGGWCCY	1 cut(s)	1475
PstNI	CAGNNNCTG	2 cut(s)	1811, 2036
PsuI	RGATCY	4 cut(s)	212, 676, 1853, 2432
RsaI	GTAC	2 cut(s)	1749, 2618
RsaNI	GTAC	2 cut(s)	1748, 2617
RseI	CAYNNNNRTG	3 cut(s)	729, 1039, 2719
SaqAI	TTAA	5 cut(s)	1722, 1889, 2510, 2525, 2763
SatI	GCNGC	9 cut(s)	14, 335, 347, 445, 473, 1492, 1539, 2261, 2366
Sau96I	GGNCC	5 cut(s)	1475, 1619, 2181, 2537, 2750
ScaI	AGTACT	1 cut(s)	2618
SchI	GAGTC	6 cut(s)	63, 179, 701, 1328, 1447, 2006
ScrFI	CCNGG	7 cut(s)	286, 454, 1345, 1375, 2165, 2223, 2687
SduI	GDGCHC	3 cut(s)	420, 2685, 2776
SfcI	CTRYAG	2 cut(s)	623, 2436
Sfr274I	CTCGAG	1 cut(s)	2410
SfuI	TTCGAA	2 cut(s)	57, 2598
SinI	GGWCC	4 cut(s)	1475, 1619, 2537, 2750
SlaI	CTCGAG	1 cut(s)	2410
SmiMI	CAYNNNNRTG	3 cut(s)	729, 1039, 2719
SmlI	CTYRAG	5 cut(s)	463, 653, 1888, 2378, 2410
SmoI	CTYRAG	5 cut(s)	463, 653, 1888, 2378, 2410
SseBI	AGGCCT	2 cut(s)	1378, 2731
SsiI	CCGC	5 cut(s)	13, 81, 445, 841, 863
SspMI	CTAG	5 cut(s)	888, 1179, 1851, 2313, 2802
StuI	AGGCCT	2 cut(s)	1378, 2731
StyD4I	CCNGG	7 cut(s)	284, 452, 1343, 1373, 2163, 2221, 2685
StyI	CCWWGG	6 cut(s)	817, 1006, 1191, 1554, 2247, 2720
TaiI	ACGT	1 cut(s)	1586
TaqI	TCGA	7 cut(s)	57, 152, 577, 2229, 2411, 2598, 2785
TaqII	GACCGA	1 cut(s)	2682
TatI	WGTACW	2 cut(s)	1747, 2616
TauI	GCSGC	2 cut(s)	16, 447
Tru1I	TTAA	5 cut(s)	1722, 1889, 2510, 2525, 2763
Tru9I	TTAA	5 cut(s)	1722, 1889, 2510, 2525, 2763
TscAI	CASTG	4 cut(s)	559, 859, 1087, 2713
TseFI	GTSAC	5 cut(s)	31, 783, 1998, 2141, 2561
TseI	GCWGC	7 cut(s)	334, 346, 472, 1491, 1538, 2260, 2365
Tsp45I	GTSAC	5 cut(s)	31, 783, 1998, 2141, 2561
TspGWI	ACGGA	2 cut(s)	1396, 2206
TspRI	CASTG	4 cut(s)	559, 859, 1087, 2713
Van91I	CCANNNNNTGG	2 cut(s)	1007, 1471
Vha464I	CTTAAG	1 cut(s)	1888
VneI	GTGCAC	1 cut(s)	2772
VpaK11BI	GGWCC	4 cut(s)	1475, 1619, 2537, 2750
VspI	ATTAAT	1 cut(s)	2763
XagI	CCTNNNNNAGG	2 cut(s)	1010, 1891
XapI	RAATTY	8 cut(s)	479, 638, 689, 1085, 1220, 1866, 2041, 2674
XbaI	TCTAGA	2 cut(s)	1178, 1850
XceI	RCATGY	2 cut(s)	911, 1297
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1145, 2219
XhoI	CTCGAG	1 cut(s)	2410
XmiI	GTMKAC	2 cut(s)	904, 2493
XspI	CTAG	5 cut(s)	888, 1179, 1851, 2313, 2802
ZrmI	AGTACT	1 cut(s)	2618
Zsp2I	ATGCAT	2 cut(s)	1664, 2062

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.