Protein of unknown function (DUF3741)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53540 AT3G53540 |
| fragaria_vesca | FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 FvH4_6g14620 |
| malus_domestica | MD04G1118500.v1.1 MD12G1134100.v1.1 MD12G1134200.v1.1 MD12G1134300.v1.1 MD12G1134400.v1.1 |
| prunus_persica | Prupe.6G247900_v2.0.a1 Prupe.6G247900_v2.0.a1 |
| pyrus_communis | pycom04g10820 pycom12g12970 |
| rosa_chinensis | RchiOBHm_Chr3g0467721 |
| rosa_laevigata | RLG00000024478 |
| rosa_multiflora | Rmu_co8048390.1_g000001 Rmu_co8092630.1_g000001 Rmu_co8309069.1_g000001 Rmu_sc0001793.1_g000010 Rmu_sc0013459.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00413480 |
| rosa_rugosa | Rorug03G0089200 Rorug03G0089200 |
| rosa_samantha | Rh3AG137700 Rh3BG159000 Rh3CG158900 Rh3DG159500 |
| rosa_wichuraiana | Rw3G013040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1413 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1150 |
| Acc36I | ACCTGC | 2 cut(s) | 1088, 2043 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 692 |
| AccBSI | CCGCTC | 1 cut(s) | 771 |
| AccI | GTMKAC | 1 cut(s) | 589 |
| AciI | CCGC | 3 cut(s) | 769, 1163, 1230 |
| AclWI | GGATC | 7 cut(s) | 372, 1536, 1634, 2091, 2104, 2143, 2402 |
| AcoI | YGGCCR | 1 cut(s) | 451 |
| AcsI | RAATTY | 6 cut(s) | 155, 326, 377, 824, 1274, 2371 |
| AcuI | CTGAAG | 5 cut(s) | 368, 701, 898, 1665, 2042 |
| AfaI | GTAC | 3 cut(s) | 702, 1186, 1908 |
| AfeI | AGCGCT | 1 cut(s) | 2029 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 692, 697, 788, 1581 |
| AflII | CTTAAG | 1 cut(s) | 1576 |
| AflIII | ACRYGT | 1 cut(s) | 1992 |
| AgeI | ACCGGT | 1 cut(s) | 120 |
| AgsI | TTSAA | 5 cut(s) | 173, 297, 321, 376, 1477 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 121, 2331 |
| AjiI | CACGTC | 1 cut(s) | 1993 |
| AjnI | CCWGG | 3 cut(s) | 1064, 1544, 1909 |
| AleI | CACNNNNGTG | 1 cut(s) | 99 |
| Alw21I | GWGCWC | 2 cut(s) | 96, 1902 |
| Alw26I | GTCTC | 8 cut(s) | 1114, 1158, 1601, 2012, 2234, 2318, 2489, 2568 |
| AlwI | GGATC | 7 cut(s) | 372, 1536, 1634, 2091, 2104, 2143, 2402 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1724 |
| Aor51HI | AGCGCT | 1 cut(s) | 2029 |
| AoxI | GGCC | 4 cut(s) | 451, 1110, 1526, 2446 |
| ApeKI | GCWGC | 5 cut(s) | 148, 221, 224, 710, 2053 |
| ApoI | RAATTY | 6 cut(s) | 155, 326, 377, 824, 1274, 2371 |
| AsiGI | ACCGGT | 1 cut(s) | 120 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 824 |
| AspLEI | GCGC | 3 cut(s) | 1071, 1428, 2030 |
| AspS9I | GGNCC | 5 cut(s) | 434, 1292, 1310, 1526, 2447 |
| AsuC2I | CCSGG | 1 cut(s) | 1430 |
| AsuHPI | GGTGA | 8 cut(s) | 720, 977, 1030, 1265, 1593, 1823, 2405, 2516 |
| AsuII | TTCGAA | 1 cut(s) | 2295 |
| AsuNHI | GCTAGC | 1 cut(s) | 1172 |
| AvaII | GGWCC | 3 cut(s) | 434, 1292, 1310 |
| BamHI | GGATCC | 1 cut(s) | 2096 |
| BauI | CACGAG | 1 cut(s) | 216 |
| BbsI | GAAGAC | 1 cut(s) | 1749 |
| Bbv12I | GWGCWC | 2 cut(s) | 96, 1902 |
| BbvI | GCAGC | 5 cut(s) | 160, 211, 233, 697, 2065 |
| BccI | CCATC | 8 cut(s) | 31, 247, 481, 1283, 1328, 1340, 1619, 1867 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2027, 2061 |
| BciT130I | CCWGG | 3 cut(s) | 1066, 1546, 1911 |
| BclI | TGATCA | 2 cut(s) | 1510, 1945 |
| BcnI | CCSGG | 1 cut(s) | 1430 |
| BcoDI | GTCTC | 8 cut(s) | 1114, 1158, 1601, 2012, 2234, 2318, 2489, 2568 |
| BfmI | CTRYAG | 3 cut(s) | 1296, 1537, 1822 |
| BfoI | RGCGCY | 2 cut(s) | 1072, 2031 |
| BfrI | CTTAAG | 1 cut(s) | 1576 |
| BfuAI | ACCTGC | 2 cut(s) | 1088, 2043 |
| BisI | GCNGC | 6 cut(s) | 149, 222, 225, 711, 1230, 2054 |
| BlpI | GCTNAGC | 1 cut(s) | 483 |
| BlsI | GCNGC | 6 cut(s) | 150, 223, 226, 712, 1231, 2055 |
| Bme1390I | CCNGG | 4 cut(s) | 1066, 1430, 1546, 1911 |
| Bme18I | GGWCC | 3 cut(s) | 434, 1292, 1310 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 121, 2331 |
| BmgBI | CACGTC | 1 cut(s) | 1993 |
| BmgT120I | GGNCC | 5 cut(s) | 434, 1292, 1310, 1526, 2447 |
| BmiI | GGNNCC | 5 cut(s) | 436, 767, 1857, 1977, 2098 |
| BmrFI | CCNGG | 4 cut(s) | 1066, 1430, 1546, 1911 |
| BmrI | ACTGGG | 1 cut(s) | 1947 |
| BmtI | GCTAGC | 1 cut(s) | 1176 |
| BmuI | ACTGGG | 1 cut(s) | 1947 |
| BpiI | GAAGAC | 1 cut(s) | 1749 |
| BpmI | CTGGAG | 7 cut(s) | 74, 1048, 1767, 1991, 2250, 2324, 2405 |
| Bpu10I | CCTNAGC | 1 cut(s) | 882 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 483 |
| Bpu14I | TTCGAA | 1 cut(s) | 2295 |
| BpuEI | CTTGAG | 5 cut(s) | 362, 596, 726, 2051, 2095 |
| BpuMI | CCSGG | 1 cut(s) | 1430 |
| Bsa29I | ATCGAT | 1 cut(s) | 1986 |
| BsaAI | YACGTR | 1 cut(s) | 1442 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1375, 1509 |
| BsaI | GGTCTC | 2 cut(s) | 2234, 2489 |
| BsaJI | CCNNGG | 5 cut(s) | 189, 505, 691, 1467, 2417 |
| BsaWI | WCCGGW | 2 cut(s) | 120, 2364 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 692, 697, 788, 1581 |
| Bse118I | RCCGGY | 1 cut(s) | 120 |
| Bse1I | ACTGG | 4 cut(s) | 436, 1953, 1958, 2276 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1375, 1509 |
| BseBI | CCWGG | 3 cut(s) | 1066, 1546, 1911 |
| BseCI | ATCGAT | 1 cut(s) | 1986 |
| BseDI | CCNNGG | 5 cut(s) | 189, 505, 691, 1467, 2417 |
| BseJI | GATNNNNATC | 2 cut(s) | 1375, 1509 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 692, 697, 788, 1581 |
| BseNI | ACTGG | 4 cut(s) | 436, 1953, 1958, 2276 |
| BseRI | GAGGAG | 2 cut(s) | 537, 2537 |
| BseXI | GCAGC | 5 cut(s) | 160, 211, 233, 697, 2065 |
| BseYI | CCCAGC | 1 cut(s) | 2178 |
| BshFI | GGCC | 4 cut(s) | 453, 1112, 1528, 2448 |
| BshTI | ACCGGT | 1 cut(s) | 120 |
| BshVI | ATCGAT | 1 cut(s) | 1986 |
| BsiHKAI | GWGCWC | 2 cut(s) | 96, 1902 |
| BsiSI | CCGG | 3 cut(s) | 121, 1429, 2365 |
| BslFI | GGGAC | 3 cut(s) | 420, 1874, 2564 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 692, 697, 788, 1581 |
| BsmAI | GTCTC | 8 cut(s) | 1114, 1158, 1601, 2012, 2234, 2318, 2489, 2568 |
| BsmFI | GGGAC | 3 cut(s) | 420, 1874, 2564 |
| BsmI | GAATGC | 3 cut(s) | 712, 1472, 1775 |
| BsnI | GGCC | 4 cut(s) | 453, 1112, 1528, 2448 |
| Bso31I | GGTCTC | 2 cut(s) | 2234, 2489 |
| Bsp119I | TTCGAA | 1 cut(s) | 2295 |
| Bsp1286I | GDGCHC | 2 cut(s) | 96, 1902 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 483 |
| Bsp19I | CCATGG | 1 cut(s) | 2417 |
| BspACI | CCGC | 3 cut(s) | 769, 1163, 1230 |
| BspANI | GGCC | 4 cut(s) | 453, 1112, 1528, 2448 |
| BspDI | ATCGAT | 1 cut(s) | 1986 |
| BspLI | GGNNCC | 5 cut(s) | 436, 767, 1857, 1977, 2098 |
| BspMI | ACCTGC | 2 cut(s) | 1088, 2043 |
| BspOI | GCTAGC | 1 cut(s) | 1176 |
| BspPI | GGATC | 7 cut(s) | 372, 1536, 1634, 2091, 2104, 2143, 2402 |
| BspQI | GCTCTTC | 1 cut(s) | 2292 |
| BspT104I | TTCGAA | 1 cut(s) | 2295 |
| BspTI | CTTAAG | 1 cut(s) | 1576 |
| BspTNI | GGTCTC | 2 cut(s) | 2234, 2489 |
| BsrBI | CCGCTC | 1 cut(s) | 771 |
| BsrFI | RCCGGY | 1 cut(s) | 120 |
| BsrI | ACTGG | 4 cut(s) | 436, 1953, 1958, 2276 |
| BssAI | RCCGGY | 1 cut(s) | 120 |
| BssECI | CCNNGG | 5 cut(s) | 189, 505, 691, 1467, 2417 |
| BssSI | CACGAG | 1 cut(s) | 216 |
| BssT1I | CCWWGG | 4 cut(s) | 189, 505, 691, 2417 |
| Bst2BI | CACGAG | 1 cut(s) | 216 |
| Bst2UI | CCWGG | 3 cut(s) | 1066, 1546, 1911 |
| Bst4CI | ACNGT | 6 cut(s) | 539, 974, 1872, 2358, 2443, 2483 |
| Bst6I | CTCTTC | 4 cut(s) | 1112, 1641, 2292, 2502 |
| BstAFI | CTTAAG | 1 cut(s) | 1576 |
| BstBAI | YACGTR | 1 cut(s) | 1442 |
| BstBI | TTCGAA | 1 cut(s) | 2295 |
| BstC8I | GCNNGC | 5 cut(s) | 1174, 1203, 1227, 1930, 2499 |
| BstDSI | CCRYGG | 1 cut(s) | 2417 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 695, 1579 |
| BstH2I | RGCGCY | 2 cut(s) | 1072, 2031 |
| BstHHI | GCGC | 3 cut(s) | 1071, 1428, 2030 |
| BstMAI | GTCTC | 8 cut(s) | 1114, 1158, 1601, 2012, 2234, 2318, 2489, 2568 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 254, 850, 1169, 1663, 1718, 2050, 2059, 2563 |
| BstNI | CCWGG | 3 cut(s) | 1066, 1546, 1911 |
| BstNSI | RCATGY | 2 cut(s) | 596, 988 |
| BstSCI | CCNGG | 4 cut(s) | 1064, 1428, 1544, 1909 |
| BstSFI | CTRYAG | 3 cut(s) | 1296, 1537, 1822 |
| BstV1I | GCAGC | 5 cut(s) | 160, 211, 233, 697, 2065 |
| BstV2I | GAAGAC | 1 cut(s) | 1749 |
| BstX2I | RGATCY | 4 cut(s) | 364, 1541, 2096, 2135 |
| BstYI | RGATCY | 4 cut(s) | 364, 1541, 2096, 2135 |
| Bsu15I | ATCGAT | 1 cut(s) | 1986 |
| BsuRI | GGCC | 4 cut(s) | 453, 1112, 1528, 2448 |
| BsuTUI | ATCGAT | 1 cut(s) | 1986 |
| BtgI | CCRYGG | 1 cut(s) | 2417 |
| BtgZI | GCGATG | 1 cut(s) | 1339 |
| BtrI | CACGTC | 1 cut(s) | 1993 |
| BtsIMutI | CAGTG | 5 cut(s) | 247, 1032, 1812, 2283, 2403 |
| BveI | ACCTGC | 2 cut(s) | 1088, 2043 |
| Cac8I | GCNNGC | 5 cut(s) | 1174, 1203, 1227, 1930, 2499 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1724 |
| CfoI | GCGC | 3 cut(s) | 1071, 1428, 2030 |
| Cfr10I | RCCGGY | 1 cut(s) | 120 |
| Cfr13I | GGNCC | 5 cut(s) | 434, 1292, 1310, 1526, 2447 |
| ClaI | ATCGAT | 1 cut(s) | 1986 |
| CsiI | ACCWGGT | 1 cut(s) | 1909 |
| Csp6I | GTAC | 3 cut(s) | 701, 1185, 1907 |
| CspAI | ACCGGT | 1 cut(s) | 120 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 652, 687 |
| CviQI | GTAC | 3 cut(s) | 701, 1185, 1907 |
| DraI | TTTAAA | 2 cut(s) | 952, 2223 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1150 |
| DriI | GACNNNNNGTC | 2 cut(s) | 121, 2331 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1150 |
| EaeI | YGGCCR | 1 cut(s) | 451 |
| Eam1104I | CTCTTC | 4 cut(s) | 1112, 1641, 2292, 2502 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 121, 2331 |
| EarI | CTCTTC | 4 cut(s) | 1112, 1641, 2292, 2502 |
| Eco130I | CCWWGG | 4 cut(s) | 189, 505, 691, 2417 |
| Eco31I | GGTCTC | 2 cut(s) | 2234, 2489 |
| Eco47I | GGWCC | 3 cut(s) | 434, 1292, 1310 |
| Eco47III | AGCGCT | 1 cut(s) | 2029 |
| Eco57I | CTGAAG | 5 cut(s) | 368, 701, 898, 1665, 2042 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 695, 1579 |
| EcoRI | GAATTC | 1 cut(s) | 326 |
| EcoRII | CCWGG | 3 cut(s) | 1064, 1544, 1909 |
| EcoT14I | CCWWGG | 4 cut(s) | 189, 505, 691, 2417 |
| EcoT22I | ATGCAT | 3 cut(s) | 1355, 1750, 1777 |
| ErhI | CCWWGG | 4 cut(s) | 189, 505, 691, 2417 |
| FaqI | GGGAC | 3 cut(s) | 420, 1874, 2564 |
| FauI | CCCGC | 1 cut(s) | 1156 |
| FauNDI | CATATG | 1 cut(s) | 2086 |
| FbaI | TGATCA | 2 cut(s) | 1510, 1945 |
| FblI | GTMKAC | 1 cut(s) | 589 |
| Fnu4HI | GCNGC | 6 cut(s) | 149, 222, 225, 711, 1230, 2054 |
| Fsp4HI | GCNGC | 6 cut(s) | 149, 222, 225, 711, 1230, 2054 |
| GlaI | GCGC | 3 cut(s) | 1070, 1427, 2029 |
| GluI | GCNGC | 6 cut(s) | 149, 222, 225, 711, 1230, 2054 |
| GsaI | CCCAGC | 1 cut(s) | 2182 |
| GsuI | CTGGAG | 7 cut(s) | 74, 1048, 1767, 1991, 2250, 2324, 2405 |
| HaeII | RGCGCY | 2 cut(s) | 1072, 2031 |
| HaeIII | GGCC | 4 cut(s) | 453, 1112, 1528, 2448 |
| HapII | CCGG | 3 cut(s) | 121, 1429, 2365 |
| HhaI | GCGC | 3 cut(s) | 1071, 1428, 2030 |
| Hin6I | GCGC | 3 cut(s) | 1069, 1426, 2028 |
| HinP1I | GCGC | 3 cut(s) | 1069, 1426, 2028 |
| HincII | GTYRAC | 1 cut(s) | 1077 |
| HindII | GTYRAC | 1 cut(s) | 1077 |
| HpaII | CCGG | 3 cut(s) | 121, 1429, 2365 |
| HphI | GGTGA | 8 cut(s) | 720, 977, 1030, 1265, 1593, 1823, 2405, 2516 |
| Hpy166II | GTNNAC | 5 cut(s) | 405, 590, 1077, 1187, 1310 |
| Hpy8I | GTNNAC | 5 cut(s) | 405, 590, 1077, 1187, 1310 |
| HpyAV | CCTTC | 8 cut(s) | 691, 833, 1336, 1514, 1805, 2126, 2162, 2254 |
| HpyCH4III | ACNGT | 6 cut(s) | 539, 974, 1872, 2358, 2443, 2483 |
| HpyCH4IV | ACGT | 3 cut(s) | 1441, 1992, 2428 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 254, 850, 1169, 1663, 1718, 2050, 2059, 2563 |
| HpySE526I | ACGT | 3 cut(s) | 1441, 1992, 2428 |
| HspAI | GCGC | 3 cut(s) | 1069, 1426, 2028 |
| Ksp22I | TGATCA | 2 cut(s) | 1510, 1945 |
| LguI | GCTCTTC | 1 cut(s) | 2292 |
| LmnI | GCTCC | 2 cut(s) | 145, 1577 |
| Lsp1109I | GCAGC | 5 cut(s) | 160, 211, 233, 697, 2065 |
| MabI | ACCWGGT | 1 cut(s) | 1909 |
| MaeII | ACGT | 3 cut(s) | 1441, 1992, 2428 |
| MaeIII | GTNAC | 3 cut(s) | 206, 1829, 2318 |
| MbiI | CCGCTC | 1 cut(s) | 771 |
| MflI | RGATCY | 4 cut(s) | 364, 1541, 2096, 2135 |
| MhlI | GDGCHC | 2 cut(s) | 96, 1902 |
| MlyI | GAGTC | 8 cut(s) | 389, 1116, 1138, 1603, 1694, 2014, 2290, 2546 |
| MmeI | TCCRAC | 4 cut(s) | 330, 769, 2031, 2052 |
| Mph1103I | ATGCAT | 3 cut(s) | 1355, 1750, 1777 |
| MroXI | GAANNNNTTC | 1 cut(s) | 824 |
| MseI | TTAA | 6 cut(s) | 159, 951, 1577, 2207, 2222, 2460 |
| MslI | CAYNNNNRTG | 2 cut(s) | 99, 417 |
| MspA1I | CMGCKG | 1 cut(s) | 224 |
| MspCI | CTTAAG | 1 cut(s) | 1576 |
| MspI | CCGG | 3 cut(s) | 121, 1429, 2365 |
| MspR9I | CCNGG | 4 cut(s) | 1066, 1430, 1546, 1911 |
| MssI | GTTTAAAC | 1 cut(s) | 2223 |
| Mva1269I | GAATGC | 3 cut(s) | 712, 1472, 1775 |
| MvaI | CCWGG | 3 cut(s) | 1066, 1546, 1911 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 254, 850, 1169, 1663, 1718, 2050, 2059, 2563 |
| NciI | CCSGG | 1 cut(s) | 1430 |
| NcoI | CCATGG | 1 cut(s) | 2417 |
| NdeI | CATATG | 1 cut(s) | 2086 |
| NheI | GCTAGC | 1 cut(s) | 1172 |
| NlaIV | GGNNCC | 5 cut(s) | 436, 767, 1857, 1977, 2098 |
| NmeAIII | GCCGAG | 2 cut(s) | 479, 1492 |
| NmuCI | GTSAC | 2 cut(s) | 1829, 2318 |
| NsiI | ATGCAT | 3 cut(s) | 1355, 1750, 1777 |
| NspI | RCATGY | 2 cut(s) | 596, 988 |
| NspV | TTCGAA | 1 cut(s) | 2295 |
| OliI | CACNNNNGTG | 1 cut(s) | 99 |
| PciSI | GCTCTTC | 1 cut(s) | 2292 |
| PctI | GAATGC | 3 cut(s) | 712, 1472, 1775 |
| PdmI | GAANNNNTTC | 1 cut(s) | 824 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 692 |
| PinAI | ACCGGT | 1 cut(s) | 120 |
| PkrI | GCNGC | 6 cut(s) | 150, 223, 226, 712, 1231, 2055 |
| PleI | GAGTC | 8 cut(s) | 389, 1116, 1138, 1603, 1693, 2014, 2289, 2546 |
| PmeI | GTTTAAAC | 1 cut(s) | 2223 |
| PpsI | GAGTC | 8 cut(s) | 389, 1116, 1138, 1603, 1693, 2014, 2289, 2546 |
| Ppu21I | YACGTR | 1 cut(s) | 1442 |
| PsiI | TTATAA | 1 cut(s) | 1413 |
| Psp6I | CCWGG | 3 cut(s) | 1064, 1544, 1909 |
| PspFI | CCCAGC | 1 cut(s) | 2178 |
| PspGI | CCWGG | 3 cut(s) | 1064, 1544, 1909 |
| PspN4I | GGNNCC | 5 cut(s) | 436, 767, 1857, 1977, 2098 |
| PspPI | GGNCC | 5 cut(s) | 434, 1292, 1310, 1526, 2447 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1724 |
| PsuI | RGATCY | 4 cut(s) | 364, 1541, 2096, 2135 |
| PvuII | CAGCTG | 1 cut(s) | 224 |
| RsaI | GTAC | 3 cut(s) | 702, 1186, 1908 |
| RsaNI | GTAC | 3 cut(s) | 701, 1185, 1907 |
| RseI | CAYNNNNRTG | 2 cut(s) | 99, 417 |
| SapI | GCTCTTC | 1 cut(s) | 2292 |
| SaqAI | TTAA | 6 cut(s) | 159, 951, 1577, 2207, 2222, 2460 |
| SatI | GCNGC | 6 cut(s) | 149, 222, 225, 711, 1230, 2054 |
| Sau96I | GGNCC | 5 cut(s) | 434, 1292, 1310, 1526, 2447 |
| SchI | GAGTC | 8 cut(s) | 389, 1116, 1138, 1603, 1694, 2014, 2290, 2546 |
| ScrFI | CCNGG | 4 cut(s) | 1066, 1430, 1546, 1911 |
| SduI | GDGCHC | 2 cut(s) | 96, 1902 |
| SexAI | ACCWGGT | 1 cut(s) | 1909 |
| SfcI | CTRYAG | 3 cut(s) | 1296, 1537, 1822 |
| SfuI | TTCGAA | 1 cut(s) | 2295 |
| SinI | GGWCC | 3 cut(s) | 434, 1292, 1310 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 99, 417 |
| SmlI | CTYRAG | 6 cut(s) | 341, 611, 741, 1576, 2066, 2110 |
| SmoI | CTYRAG | 6 cut(s) | 341, 611, 741, 1576, 2066, 2110 |
| SsiI | CCGC | 3 cut(s) | 769, 1163, 1230 |
| StyD4I | CCNGG | 4 cut(s) | 1064, 1428, 1544, 1909 |
| StyI | CCWWGG | 4 cut(s) | 189, 505, 691, 2417 |
| TaaI | ACNGT | 6 cut(s) | 539, 974, 1872, 2358, 2443, 2483 |
| TaiI | ACGT | 3 cut(s) | 1444, 1995, 2431 |
| TaqI | TCGA | 3 cut(s) | 265, 1986, 2295 |
| TatI | WGTACW | 1 cut(s) | 1184 |
| TauI | GCSGC | 1 cut(s) | 1232 |
| Tru1I | TTAA | 6 cut(s) | 159, 951, 1577, 2207, 2222, 2460 |
| Tru9I | TTAA | 6 cut(s) | 159, 951, 1577, 2207, 2222, 2460 |
| TscAI | CASTG | 5 cut(s) | 247, 1032, 1812, 2283, 2410 |
| TseFI | GTSAC | 2 cut(s) | 1829, 2318 |
| TseI | GCWGC | 5 cut(s) | 148, 221, 224, 710, 2053 |
| Tsp45I | GTSAC | 2 cut(s) | 1829, 2318 |
| TspGWI | ACGGA | 1 cut(s) | 2477 |
| TspRI | CASTG | 5 cut(s) | 247, 1032, 1812, 2283, 2410 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 692 |
| Vha464I | CTTAAG | 1 cut(s) | 1576 |
| VpaK11BI | GGWCC | 3 cut(s) | 434, 1292, 1310 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 695, 1579 |
| XapI | RAATTY | 6 cut(s) | 155, 326, 377, 824, 1274, 2371 |
| XbaI | TCTAGA | 2 cut(s) | 860, 869 |
| XceI | RCATGY | 2 cut(s) | 596, 988 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 446 |
| XmiI | GTMKAC | 1 cut(s) | 589 |
| XmnI | GAANNNNTTC | 1 cut(s) | 824 |
| Zsp2I | ATGCAT | 3 cut(s) | 1355, 1750, 1777 |