Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005114

Physical Location & Seq

Genomic Coordinates Reverse (-)

10796930 .. 10804950

Gene Structure 8021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g16930.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGGATTTCTCGGAGCTGCGCACGGCGGTGGAGGAGGCGGAGCTAGTCGACGCCCACGCACACAACCTCGTCGCCGTCGACTCCTCCTTCCCCTTCATCAAAGCCTTCTCCGAAGCCGATGGCGCCGCCTTATCCCACGCCCCCCATTCCCTCTCCTTCAAGAGAAGTTTGAAGGAGGTTGCGGAGCTCTACGGGTGCGAGAAGAGCTTGGAAGCAGTTGAGGAGCACCGGAGAGTCGCCGGAGTAGAGGCGATTAGCTCGAGATGCTTTGAGGCGGCGAGAATCTCGGCATTGCTTATTGATGATGGACTGAAGCTGGATAAAATGTATGGCATTGATTGGCATAAGAGTGCCGCGCCTGTGGTTGGGAGGATTTTGAGGATTGAGAGTCTGGCTGAGCAGATTCTTGATGAGGAGTTGCTGGGTGGATCTTCTTGGACATTGGATGTGTTCACTGAAACATTCATTGGAAAGTTGAAGTCATTGGCTGATAAGATTTTCGGCTTGAAAAGTATAGCTGCATATCGCAGCGGGCTGGAAATTAGTACGCATGTCAATAGGAAAGATGTCGAGGAAGGTCTTTCTGAGGTTCAACAGGCTGGAAAGCCTGTTCGCATATCAAATAAAAGTTTTATCGACTATATTTTCACTCGTAGTTTGGAGGTTGCTGTACTTTTTGACTTGCCAATGCAGATACATACAGGTTTTGGCGACAAAGATTTGGACTTGAGGCTGTCCAATCCCCTTCATCTCCGGGAAATGCTTGAGGACAAGAGATTTTCTAAAAGCCGTATTGTTCTGTTACATGCGTCCTACCCGTTTTCAAAGGAAGCGTCATATCTAGCCTCTGTTTATCCCCAGGTCTACCTCGACTTTGGCTTGGCCATACCCAAGCTCAGTGTCCATGGGATGATATCTTCACTAAAAGAACTTTTGGAGCTAGCTCCAATTAAGAAGGTCATGTTCAGCACTGATGGATATGCGTTTCCTGAAACTTTTTACTTAGGTGCAAAAAAGGCACGTGAAGTTGTCTTTTCAGTTCTACATGAGGCCTGTGCTGACGGTGATCTCTCAATTCCGGAGGCTATTGAGGCTGCTAAAAACATCTTTTCACAAAATGCAGTTCAGTTTTACAAGATTGATCTTGTTGTCAGATCTTCTGGTTTAGCCAACAGTGTATCCTCTAACTTTGTGAAGGTGAAGAGTAATGACTCGGAAAATCATGTCTCATTTGTTCGTGTTTTCTGGGCTGATGCATCAGGACAGCAAAGATGTCGTGTTGTTCCTGCTAAGCGGTTCAATGACGTTGTTACAAAAAATGGCATTGGTTTGACTTTTGCTTGTATGGGAATGACTTCATTCACTGATGGTCCCGCTGATGAGACTAATTTGACTGGTGTGGGTGAGATCAGACTCATGCCTGATTTATCGACTAAATGGAGAATTCCATGGGTAGAACAAGAGGAAATGGTTTTGGCCAACATGCATCTTAAACCAGGTGAAGCATGGGAATACTGCCCGAGAGAGACCTTGCAGAGGGTTTCAAAAATTTTGAAAGATGAATTCAACTTGGAAATGAATGCAGGATTTGAAAATGAATTTTTTCTCTTGAAGAGTACACTAAGGGATGGAAAAGAAGAATGGGTACCATTTGACTCAACACCATACTGTTCCCCATCATCGTATGATGCTGCTTCCCCTTTGTTTCACAAAGTTATTGCTGCTCTCCAGTCCCTGAATATAACTGTAGAACAGTTACATGCAGAAAGTGGGAAAGGTCAGTTTGAGATGGCTCTAGGGCACACAGCTTGCCTGCATGCTGCTGACAACTTGATTTATACCCGTGAAGTTATTAGGGCCATTGCAAGAAAACACGGATTGTTGGCGACCTTTATGCCGAAGTATGCGCTGGATGAGATTGGCTCTGGAGCCCATGTACATCTCAGTTTGTGGCAGAATGGCAAAAATGTATTCATGGCATCTGGTGGATCCTCTCAGCATGGGATGTCCAAGGTTGGGGAGGAATTTATGGCAGGAGTTCTATATCATCTCCCTGCAGTTTTGGCATTTACAGCTCCAATTCCGAATAGTTATGACCGGATACAACCTAATACTTGGAGTGGAGCATACAAGTGCTGGGGAAAAGAAAACAGGGAAGCTCCATTAAGAACTGCATGCCCACCTGGAATCCAATCTGGTTTGGTGAGCAACTTCGAGATCAAGTCATTTGATGGGTGTGCAAATCCACACTTGGGCCTGGCTGCAATACTAGCTGCTGGCATTGATGGTCTTAGGAGGCAACTTTGTCTCCCCAAACCTATTGATACAAATCCTTCTAGCCTTGAAGGAGAACTACAAAGATTACCAAAGTCACTTTCGGAGTCATTAGAAGCTTTAAAGGAAGATGATCTTTTCAAAGATTTCATTGGGGAAAAGCTATTGGTTGCCATAAAGGGGGTCCGTAAGGCAGAAATTGACTACTACGACAAGCACAAAGATGCATACAAGCAACTTATACACCGCTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000905 GO:0001896 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009403 GO:0009404 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010720 GO:0010913 GO:0010914 GO:0012501 GO:0018130 GO:0019222 GO:0019438 GO:0019748 GO:0019954 GO:0022414 GO:0030154 GO:0030436 GO:0030582 GO:0030584 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0034305 GO:0043385 GO:0043386 GO:0043455 GO:0043934 GO:0043937 GO:0043938 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0045460 GO:0045461 GO:0045595 GO:0045597 GO:0046483 GO:0048315 GO:0048468 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0060284 GO:0061458 GO:0061794 GO:0065007 GO:0071704 GO:0075259 GO:0075306 GO:0075307 GO:1900376 GO:1900378 GO:1901360 GO:1901362 GO:1901376 GO:1901378 GO:1901576 GO:1903664 GO:1903666

KEGG Pathways

Metabolic & Signaling

ko00220 ko00250 ko00630 ko00910 ko01100 ko01120 ko01230 ko02020 ko04217 ko04724 ko04727 map00220 map00250 map00630 map00910 map01100 map01120 map01230 map02020 map04217 map04724 map04727

Pfam Domains

Protein Families

Amidohydro_2 Gln-synt_C Gln-synt_N_2

Protein Analysis

843

Amino Acids

93.45

Weight (kDa)

5.9

Isoelectric Point (pI)

41.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidohydro_2	PF04909	218 - 379	5.3e-14	Amidohydrolase
Gln-synt_N_2	PF16952	399 - 484	1e-06	Glutamine synthetase N-terminal domain
Gln-synt_C	PF00120	546 - 742	3.2e-55	Glutamine synthetase, catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53180
fragaria_vesca	FvH4_6g16930 FvH4_6g16930 FvH4_6g16930
malus_domestica	MD00G1214800.v1.1 MD13G1277900.v1.1
prunus_persica	Prupe.7G124800_v2.0.a1 Prupe.7G124800_v2.0.a1
pyrus_communis	pycom04g08210
rosa_chinensis	RchiOBHm_Chr3g0470971 RchiOBHm_Chr5g0018301
rosa_laevigata	RLG00000024228
rosa_multiflora	Rmu_sc0005264.1_g000001 Rmu_sc0011919.1_g000005
rosa_roxburghii	Rroxscaffold_6G00410370
rosa_rugosa	Rorug03G0114300 Rorug03G0114300 Rorug03G0114400 Rorug05G0041200 Rorug05G0041200
rosa_samantha	Rh3AG164000 Rh3BG189600 Rh3CG179500 Rh3DG186600 Rh5AG134300 Rh5BG133100 Rh5CG144800 Rh5DG134500
rosa_wichuraiana	Rw3G015430 Rw5G011740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	20
Acc65I	GGTACC	1 cut(s)	1645
AccB1I	GGYRCC	2 cut(s)	122, 1645
AccI	GTMKAC	3 cut(s)	48, 78, 864
AccII	CGCG	1 cut(s)	356
AccIII	TCCGGA	1 cut(s)	1078
AclWI	GGATC	3 cut(s)	436, 1983, 1996
AcoI	YGGCCR	2 cut(s)	882, 1476
AcsI	RAATTY	5 cut(s)	1443, 1548, 1562, 1598, 2024
AcuI	CTGAAG	1 cut(s)	332
AcvI	CACGTG	1 cut(s)	1022
AcyI	GRCGYC	2 cut(s)	51, 123
AfaI	GTAC	5 cut(s)	547, 672, 1618, 1647, 1938
AfiI	CCNNNNNNNGG	5 cut(s)	365, 1536, 2016, 2252, 2454
AjnI	CCWGG	4 cut(s)	858, 1495, 2182, 2256
AjuI	GAANNNNNNNTTGG	4 cut(s)	450, 482, 2359, 2391
AleI	CACNNNNGTG	1 cut(s)	26
AloI	GAACNNNNNNTCC	2 cut(s)	594, 626
Alw21I	GWGCWC	2 cut(s)	189, 228
Alw26I	GTCTC	4 cut(s)	1231, 1376, 1520, 2312
AlwI	GGATC	3 cut(s)	436, 1983, 1996
AlwNI	CAGNNNCTG	1 cut(s)	1735
Ama87I	CYCGRG	2 cut(s)	259, 1519
Aor13HI	TCCGGA	1 cut(s)	1078
AoxI	GGCC	5 cut(s)	882, 1050, 1476, 1857, 2254
ApeKI	GCWGC	9 cut(s)	16, 518, 528, 1094, 1691, 1721, 1820, 2261, 2273
ApoI	RAATTY	5 cut(s)	1443, 1548, 1562, 1598, 2024
ArsI	GACNNNNNNTTYG	2 cut(s)	818, 850
Asp700I	GAANNNNTTC	2 cut(s)	1354, 1602
Asp718I	GGTACC	1 cut(s)	1645
AspLEI	GCGC	4 cut(s)	21, 125, 358, 1909
AspS9I	GGNCC	4 cut(s)	1370, 1857, 2254, 2458
AsuC2I	CCSGG	1 cut(s)	755
AsuHPI	GGTGA	5 cut(s)	1076, 1210, 1415, 1511, 2215
AsuNHI	GCTAGC	1 cut(s)	940
AvaI	CYCGRG	2 cut(s)	259, 1519
AvaII	GGWCC	2 cut(s)	1370, 2458
BaeGI	GKGCMC	1 cut(s)	1803
BalI	TGGCCA	2 cut(s)	884, 1478
BamHI	GGATCC	1 cut(s)	1988
BanI	GGYRCC	2 cut(s)	122, 1645
BanII	GRGCYC	2 cut(s)	189, 1933
BarI	GAAGNNNNNNTAC	4 cut(s)	1629, 1661, 2337, 2369
BbrPI	CACGTG	1 cut(s)	1022
Bbv12I	GWGCWC	2 cut(s)	189, 228
BbvI	GCAGC	9 cut(s)	3, 505, 540, 1081, 1678, 1708, 1807, 2248, 2260
BccI	CCATC	9 cut(s)	113, 299, 968, 1361, 1622, 1684, 1783, 2225, 2279
BceAI	ACGGC	3 cut(s)	39, 59, 774
BcgI	CGANNNNNNTGC	4 cut(s)	1256, 1290, 1876, 1910
BciT130I	CCWGG	4 cut(s)	860, 1497, 2184, 2258
BciVI	GTATCC	2 cut(s)	1189, 2094
BcnI	CCSGG	1 cut(s)	755
BcoDI	GTCTC	4 cut(s)	1231, 1376, 1520, 2312
BfaI	CTAG	6 cut(s)	44, 842, 941, 1796, 2270, 2337
BfmI	CTRYAG	2 cut(s)	1746, 2055
BfoI	RGCGCY	1 cut(s)	126
BfuI	GTATCC	2 cut(s)	1189, 2094
BglII	AGATCT	1 cut(s)	1154
BlpI	GCTNAGC	2 cut(s)	396, 1290
Bme1390I	CCNGG	5 cut(s)	755, 860, 1497, 2184, 2258
Bme18I	GGWCC	2 cut(s)	1370, 2458
BmeT110I	CYCGRG	2 cut(s)	259, 1519
BmgT120I	GGNCC	4 cut(s)	1370, 1857, 2254, 2458
BmiI	GGNNCC	6 cut(s)	124, 1372, 1647, 1930, 1990, 2459
BmrFI	CCNGG	5 cut(s)	755, 860, 1497, 2184, 2258
BmsI	GCATC	7 cut(s)	254, 1243, 1265, 1495, 1678, 1988, 2488
BmtI	GCTAGC	1 cut(s)	944
BplI	GAGNNNNNCTC	2 cut(s)	1907, 1939
BpmI	CTGGAG	2 cut(s)	1712, 1947
Bpu1102I	GCTNAGC	2 cut(s)	396, 1290
BpuEI	CTTGAG	2 cut(s)	748, 785
BpuMI	CCSGG	1 cut(s)	755
BsaAI	YACGTR	1 cut(s)	1022
BsaBI	GATNNNNATC	1 cut(s)	2328
BsaHI	GRCGYC	2 cut(s)	51, 123
BsaI	GGTCTC	1 cut(s)	1520
BsaJI	CCNNGG	4 cut(s)	858, 904, 1448, 2010
BsaWI	WCCGGW	3 cut(s)	228, 1078, 2097
BsaXI	ACNNNNNCTCC	4 cut(s)	1920, 1950, 2292, 2322
Bsc4I	CCNNNNNNNGG	5 cut(s)	365, 1536, 2016, 2252, 2454
Bse1I	ACTGG	2 cut(s)	1399, 1729
Bse3DI	GCAATG	2 cut(s)	290, 1860
Bse8I	GATNNNNATC	1 cut(s)	2328
BseAI	TCCGGA	1 cut(s)	1078
BseBI	CCWGG	4 cut(s)	860, 1497, 2184, 2258
BseDI	CCNNGG	4 cut(s)	858, 904, 1448, 2010
BseGI	GGATG	5 cut(s)	451, 915, 1633, 1918, 2010
BseJI	GATNNNNATC	1 cut(s)	2328
BseLI	CCNNNNNNNGG	5 cut(s)	365, 1536, 2016, 2252, 2454
BseMI	GCAATG	2 cut(s)	290, 1860
BseMII	CTCAG	5 cut(s)	387, 576, 910, 1957, 2009
BseNI	ACTGG	2 cut(s)	1399, 1729
BseRI	GAGGAG	4 cut(s)	47, 73, 236, 428
BseSI	GKGCMC	1 cut(s)	1803
BseXI	GCAGC	9 cut(s)	3, 505, 540, 1081, 1678, 1708, 1807, 2248, 2260
BseYI	CCCAGC	2 cut(s)	421, 2136
Bsh1236I	CGCG	1 cut(s)	356
BshFI	GGCC	5 cut(s)	884, 1052, 1478, 1859, 2256
BshNI	GGYRCC	2 cut(s)	122, 1645
BsiHKAI	GWGCWC	2 cut(s)	189, 228
BsiHKCI	CYCGRG	2 cut(s)	259, 1519
BsiSI	CCGG	5 cut(s)	229, 240, 754, 1079, 2098
BslFI	GGGAC	2 cut(s)	1356, 1717
BslI	CCNNNNNNNGG	5 cut(s)	365, 1536, 2016, 2252, 2454
BsmAI	GTCTC	4 cut(s)	1231, 1376, 1520, 2312
BsmFI	GGGAC	2 cut(s)	1356, 1717
BsmI	GAATGC	1 cut(s)	1585
BsnI	GGCC	5 cut(s)	884, 1052, 1478, 1859, 2256
Bso31I	GGTCTC	1 cut(s)	1520
BsoBI	CYCGRG	2 cut(s)	259, 1519
Bsp1286I	GDGCHC	4 cut(s)	189, 228, 1803, 1933
Bsp13I	TCCGGA	1 cut(s)	1078
Bsp1407I	TGTACA	1 cut(s)	1936
Bsp143I	GATC	8 cut(s)	428, 1066, 1141, 1154, 1407, 1988, 2217, 2407
Bsp1720I	GCTNAGC	2 cut(s)	396, 1290
Bsp19I	CCATGG	2 cut(s)	904, 1448
BspANI	GGCC	5 cut(s)	884, 1052, 1478, 1859, 2256
BspCNI	CTCAG	5 cut(s)	388, 577, 909, 1956, 2008
BspEI	TCCGGA	1 cut(s)	1078
BspFNI	CGCG	1 cut(s)	356
BspLI	GGNNCC	6 cut(s)	124, 1372, 1647, 1930, 1990, 2459
BspMAI	CTGCAG	1 cut(s)	2059
BspOI	GCTAGC	1 cut(s)	944
BspPI	GGATC	3 cut(s)	436, 1983, 1996
BspQI	GCTCTTC	1 cut(s)	197
BspT107I	GGYRCC	2 cut(s)	122, 1645
BspTNI	GGTCTC	1 cut(s)	1520
BsrDI	GCAATG	2 cut(s)	290, 1860
BsrGI	TGTACA	1 cut(s)	1936
BsrI	ACTGG	2 cut(s)	1399, 1729
BssECI	CCNNGG	4 cut(s)	858, 904, 1448, 2010
BssMI	GATC	8 cut(s)	428, 1066, 1141, 1154, 1407, 1988, 2217, 2407
BssNI	GRCGYC	2 cut(s)	51, 123
BssT1I	CCWWGG	3 cut(s)	904, 1448, 2010
Bst2UI	CCWGG	4 cut(s)	860, 1497, 2184, 2258
Bst4CI	ACNGT	5 cut(s)	1064, 1175, 1670, 1747, 1755
Bst6I	CTCTTC	3 cut(s)	197, 1196, 1607
BstACI	GRCGYC	2 cut(s)	51, 123
BstAUI	TGTACA	1 cut(s)	1936
BstBAI	YACGTR	1 cut(s)	1022
BstC8I	GCNNGC	7 cut(s)	533, 942, 1810, 1814, 1818, 2176, 2278
BstDEI	CTNAG	9 cut(s)	396, 585, 896, 1003, 1290, 1622, 1943, 1995, 2291
BstDSI	CCRYGG	2 cut(s)	904, 1448
BstENI	CCTNNNNNAGG	1 cut(s)	1534
BstF5I	GGATG	5 cut(s)	451, 915, 1633, 1918, 2010
BstFNI	CGCG	1 cut(s)	356
BstH2I	RGCGCY	1 cut(s)	126
BstHHI	GCGC	4 cut(s)	21, 125, 358, 1909
BstKTI	GATC	8 cut(s)	431, 1069, 1144, 1157, 1410, 1991, 2220, 2410
BstMAI	GTCTC	4 cut(s)	1231, 1376, 1520, 2312
BstMBI	GATC	8 cut(s)	428, 1066, 1141, 1154, 1407, 1988, 2217, 2407
BstMWI	GCNNNNNNNGC	8 cut(s)	122, 204, 264, 1016, 1091, 2063, 2072, 2270
BstNI	CCWGG	4 cut(s)	860, 1497, 2184, 2258
BstNSI	RCATGY	6 cut(s)	554, 809, 1486, 1763, 1820, 2178
BstSCI	CCNGG	5 cut(s)	753, 858, 1495, 2182, 2256
BstSFI	CTRYAG	2 cut(s)	1746, 2055
BstSLI	GKGCMC	1 cut(s)	1803
BstUI	CGCG	1 cut(s)	356
BstV1I	GCAGC	9 cut(s)	3, 505, 540, 1081, 1678, 1708, 1807, 2248, 2260
BstX2I	RGATCY	3 cut(s)	428, 1154, 1988
BstYI	RGATCY	3 cut(s)	428, 1154, 1988
BsuI	GTATCC	2 cut(s)	1189, 2094
BsuRI	GGCC	5 cut(s)	884, 1052, 1478, 1859, 2256
BtgI	CCRYGG	2 cut(s)	904, 1448
BtsCI	GGATG	5 cut(s)	451, 915, 1633, 1918, 2010
BtsIMutI	CAGTG	5 cut(s)	453, 904, 969, 1180, 1362
Cac8I	GCNNGC	7 cut(s)	533, 942, 1810, 1814, 1818, 2176, 2278
CaiI	CAGNNNCTG	1 cut(s)	1735
CfoI	GCGC	4 cut(s)	21, 125, 358, 1909
Cfr13I	GGNCC	4 cut(s)	1370, 1857, 2254, 2458
CseI	GACGC	3 cut(s)	59, 798, 822
CsiI	ACCWGGT	1 cut(s)	1495
Csp6I	GTAC	5 cut(s)	546, 671, 1617, 1646, 1937
CviQI	GTAC	5 cut(s)	546, 671, 1617, 1646, 1937
DdeI	CTNAG	9 cut(s)	396, 585, 896, 1003, 1290, 1622, 1943, 1995, 2291
DinI	GGCGCC	1 cut(s)	124
DpnI	GATC	8 cut(s)	430, 1068, 1143, 1156, 1409, 1990, 2219, 2409
DpnII	GATC	8 cut(s)	428, 1066, 1141, 1154, 1407, 1988, 2217, 2407
DraI	TTTAAA	1 cut(s)	2397
EaeI	YGGCCR	2 cut(s)	882, 1476
Eam1104I	CTCTTC	3 cut(s)	197, 1196, 1607
EarI	CTCTTC	3 cut(s)	197, 1196, 1607
EciI	GGCGGA	1 cut(s)	53
Ecl136II	GAGCTC	1 cut(s)	187
Eco130I	CCWWGG	3 cut(s)	904, 1448, 2010
Eco147I	AGGCCT	1 cut(s)	1052
Eco24I	GRGCYC	2 cut(s)	189, 1933
Eco31I	GGTCTC	1 cut(s)	1520
Eco32I	GATATC	1 cut(s)	915
Eco47I	GGWCC	2 cut(s)	1370, 2458
Eco53kI	GAGCTC	1 cut(s)	187
Eco57I	CTGAAG	1 cut(s)	332
Eco72I	CACGTG	1 cut(s)	1022
Eco88I	CYCGRG	2 cut(s)	259, 1519
EcoICRI	GAGCTC	1 cut(s)	187
EcoNI	CCTNNNNNAGG	1 cut(s)	1534
EcoRI	GAATTC	2 cut(s)	1443, 1562
EcoRII	CCWGG	4 cut(s)	858, 1495, 2182, 2256
EcoRV	GATATC	1 cut(s)	915
EcoT14I	CCWWGG	3 cut(s)	904, 1448, 2010
EcoT22I	ATGCAT	3 cut(s)	1258, 1488, 2503
EcoT38I	GRGCYC	2 cut(s)	189, 1933
EgeI	GGCGCC	1 cut(s)	124
EheI	GGCGCC	1 cut(s)	124
ErhI	CCWWGG	3 cut(s)	904, 1448, 2010
FalI	AAGNNNNNCTT	2 cut(s)	2394, 2426
FaqI	GGGAC	2 cut(s)	1356, 1717
FauI	CCCGC	2 cut(s)	524, 1381
FblI	GTMKAC	3 cut(s)	48, 78, 864
FokI	GGATG	5 cut(s)	458, 922, 1640, 1925, 2017
FriOI	GRGCYC	2 cut(s)	189, 1933
FspBI	CTAG	6 cut(s)	44, 842, 941, 1796, 2270, 2337
FspI	TGCGCA	1 cut(s)	20
GlaI	GCGC	4 cut(s)	20, 124, 357, 1908
GsaI	CCCAGC	2 cut(s)	425, 2140
GsuI	CTGGAG	2 cut(s)	1712, 1947
HaeII	RGCGCY	1 cut(s)	126
HaeIII	GGCC	5 cut(s)	884, 1052, 1478, 1859, 2256
HapII	CCGG	5 cut(s)	229, 240, 754, 1079, 2098
HgaI	GACGC	3 cut(s)	59, 798, 822
HhaI	GCGC	4 cut(s)	21, 125, 358, 1909
Hin1I	GRCGYC	2 cut(s)	51, 123
Hin6I	GCGC	4 cut(s)	19, 123, 356, 1907
HinP1I	GCGC	4 cut(s)	19, 123, 356, 1907
HincII	GTYRAC	2 cut(s)	49, 79
HindII	GTYRAC	2 cut(s)	49, 79
HindIII	AAGCTT	1 cut(s)	2391
HpaII	CCGG	5 cut(s)	229, 240, 754, 1079, 2098
HphI	GGTGA	5 cut(s)	1076, 1210, 1415, 1511, 2215
Hpy166II	GTNNAC	5 cut(s)	49, 79, 453, 865, 1619
Hpy188I	TCNGA	8 cut(s)	13, 112, 586, 1154, 1216, 1412, 2085, 2380
Hpy188III	TCNNGA	9 cut(s)	160, 261, 407, 989, 1079, 1260, 1609, 1926, 2215
Hpy8I	GTNNAC	5 cut(s)	49, 79, 453, 865, 1619
Hpy99I	CGWCG	3 cut(s)	53, 74, 80
HpyCH4III	ACNGT	5 cut(s)	1064, 1175, 1670, 1747, 1755
HpyCH4IV	ACGT	2 cut(s)	1021, 1305
HpyF10VI	GCNNNNNNNGC	8 cut(s)	122, 204, 264, 1016, 1091, 2063, 2072, 2270
HpyF3I	CTNAG	9 cut(s)	396, 585, 896, 1003, 1290, 1622, 1943, 1995, 2291
HpySE526I	ACGT	2 cut(s)	1021, 1305
Hsp92I	GRCGYC	2 cut(s)	51, 123
HspAI	GCGC	4 cut(s)	19, 123, 356, 1907
KasI	GGCGCC	1 cut(s)	122
Kpn2I	TCCGGA	1 cut(s)	1078
KpnI	GGTACC	1 cut(s)	1649
Kzo9I	GATC	8 cut(s)	428, 1066, 1141, 1154, 1407, 1988, 2217, 2407
LguI	GCTCTTC	1 cut(s)	197
Lsp1109I	GCAGC	9 cut(s)	3, 505, 540, 1081, 1678, 1708, 1807, 2248, 2260
LweI	GCATC	7 cut(s)	254, 1243, 1265, 1495, 1678, 1988, 2488
MabI	ACCWGGT	1 cut(s)	1495
MaeI	CTAG	6 cut(s)	44, 842, 941, 1796, 2270, 2337
MaeII	ACGT	2 cut(s)	1021, 1305
MaeIII	GTNAC	4 cut(s)	801, 1309, 1755, 2370
MalI	GATC	8 cut(s)	430, 1068, 1143, 1156, 1409, 1990, 2219, 2409
MboI	GATC	8 cut(s)	428, 1066, 1141, 1154, 1407, 1988, 2217, 2407
MboII	GAAGA	8 cut(s)	214, 423, 909, 1149, 1213, 1624, 1649, 2414
MflI	RGATCY	3 cut(s)	428, 1154, 1988
MhlI	GDGCHC	4 cut(s)	189, 228, 1803, 1933
MlsI	TGGCCA	2 cut(s)	884, 1478
MluNI	TGGCCA	2 cut(s)	884, 1478
Mly113I	GGCGCC	1 cut(s)	123
MlyI	GAGTC	7 cut(s)	74, 243, 397, 1205, 1407, 1649, 2390
Mox20I	TGGCCA	2 cut(s)	884, 1478
Mph1103I	ATGCAT	3 cut(s)	1258, 1488, 2503
MroI	TCCGGA	1 cut(s)	1078
MroXI	GAANNNNTTC	2 cut(s)	1354, 1602
MscI	TGGCCA	2 cut(s)	884, 1478
MseI	TTAA	5 cut(s)	951, 1491, 2165, 2396, 2527
MslI	CAYNNNNRTG	4 cut(s)	26, 348, 2131, 2496
Msp20I	TGGCCA	2 cut(s)	884, 1478
MspA1I	CMGCKG	2 cut(s)	531, 1376
MspI	CCGG	5 cut(s)	229, 240, 754, 1079, 2098
MspR9I	CCNGG	5 cut(s)	755, 860, 1497, 2184, 2258
Mva1269I	GAATGC	1 cut(s)	1585
MvaI	CCWGG	4 cut(s)	860, 1497, 2184, 2258
MvnI	CGCG	1 cut(s)	356
MwoI	GCNNNNNNNGC	8 cut(s)	122, 204, 264, 1016, 1091, 2063, 2072, 2270
NarI	GGCGCC	1 cut(s)	123
NciI	CCSGG	1 cut(s)	755
NcoI	CCATGG	2 cut(s)	904, 1448
NdeII	GATC	8 cut(s)	428, 1066, 1141, 1154, 1407, 1988, 2217, 2407
NheI	GCTAGC	1 cut(s)	940
NlaIV	GGNNCC	6 cut(s)	124, 1372, 1647, 1930, 1990, 2459
NmeAIII	GCCGAG	1 cut(s)	266
NmuCI	GTSAC	1 cut(s)	2370
NsbI	TGCGCA	1 cut(s)	20
NsiI	ATGCAT	3 cut(s)	1258, 1488, 2503
NspI	RCATGY	6 cut(s)	554, 809, 1486, 1763, 1820, 2178
OliI	CACNNNNGTG	1 cut(s)	26
PaeI	GCATGC	2 cut(s)	1820, 2178
PaeR7I	CTCGAG	1 cut(s)	259
PceI	AGGCCT	1 cut(s)	1052
PciSI	GCTCTTC	1 cut(s)	197
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	1 cut(s)	1585
PdmI	GAANNNNTTC	2 cut(s)	1354, 1602
PfeI	GAWTC	3 cut(s)	282, 403, 2187
PfoI	TCCNGGA	1 cut(s)	753
PleI	GAGTC	7 cut(s)	74, 242, 396, 1205, 1407, 1649, 2389
PluTI	GGCGCC	1 cut(s)	126
PmaCI	CACGTG	1 cut(s)	1022
PmlI	CACGTG	1 cut(s)	1022
PpsI	GAGTC	7 cut(s)	74, 242, 396, 1205, 1407, 1649, 2389
Ppu21I	YACGTR	1 cut(s)	1022
Psp124BI	GAGCTC	1 cut(s)	189
Psp6I	CCWGG	4 cut(s)	858, 1495, 2182, 2256
PspCI	CACGTG	1 cut(s)	1022
PspFI	CCCAGC	2 cut(s)	421, 2136
PspGI	CCWGG	4 cut(s)	858, 1495, 2182, 2256
PspN4I	GGNNCC	6 cut(s)	124, 1372, 1647, 1930, 1990, 2459
PspPI	GGNCC	4 cut(s)	1370, 1857, 2254, 2458
PstI	CTGCAG	1 cut(s)	2059
PstNI	CAGNNNCTG	1 cut(s)	1735
PsuI	RGATCY	3 cut(s)	428, 1154, 1988
RsaI	GTAC	5 cut(s)	547, 672, 1618, 1647, 1938
RsaNI	GTAC	5 cut(s)	546, 671, 1617, 1646, 1937
RseI	CAYNNNNRTG	4 cut(s)	26, 348, 2131, 2496
SacI	GAGCTC	1 cut(s)	189
SalI	GTCGAC	2 cut(s)	47, 77
SapI	GCTCTTC	1 cut(s)	197
SaqAI	TTAA	5 cut(s)	951, 1491, 2165, 2396, 2527
Sau3AI	GATC	8 cut(s)	428, 1066, 1141, 1154, 1407, 1988, 2217, 2407
Sau96I	GGNCC	4 cut(s)	1370, 1857, 2254, 2458
SchI	GAGTC	7 cut(s)	74, 243, 397, 1205, 1407, 1649, 2390
ScrFI	CCNGG	5 cut(s)	755, 860, 1497, 2184, 2258
SduI	GDGCHC	4 cut(s)	189, 228, 1803, 1933
SexAI	ACCWGGT	1 cut(s)	1495
SfaNI	GCATC	7 cut(s)	254, 1243, 1265, 1495, 1678, 1988, 2488
SfcI	CTRYAG	2 cut(s)	1746, 2055
SfoI	GGCGCC	1 cut(s)	124
Sfr274I	CTCGAG	1 cut(s)	259
SinI	GGWCC	2 cut(s)	1370, 2458
SlaI	CTCGAG	1 cut(s)	259
SmiMI	CAYNNNNRTG	4 cut(s)	26, 348, 2131, 2496
SmlI	CTYRAG	3 cut(s)	259, 727, 764
SmoI	CTYRAG	3 cut(s)	259, 727, 764
SphI	GCATGC	2 cut(s)	1820, 2178
SseBI	AGGCCT	1 cut(s)	1052
SspDI	GGCGCC	1 cut(s)	122
SspMI	CTAG	6 cut(s)	44, 842, 941, 1796, 2270, 2337
SstI	GAGCTC	1 cut(s)	189
StuI	AGGCCT	1 cut(s)	1052
StyD4I	CCNGG	5 cut(s)	753, 858, 1495, 2182, 2256
StyI	CCWWGG	3 cut(s)	904, 1448, 2010
TaaI	ACNGT	5 cut(s)	1064, 1175, 1670, 1747, 1755
TaiI	ACGT	2 cut(s)	1024, 1308
TaqI	TCGA	8 cut(s)	48, 78, 260, 570, 636, 870, 1430, 2214
TatI	WGTACW	3 cut(s)	670, 1616, 1936
TauI	GCSGC	3 cut(s)	128, 278, 356
TfiI	GAWTC	3 cut(s)	282, 403, 2187
Tru1I	TTAA	5 cut(s)	951, 1491, 2165, 2396, 2527
Tru9I	TTAA	5 cut(s)	951, 1491, 2165, 2396, 2527
TscAI	CASTG	5 cut(s)	460, 904, 976, 1180, 1369
TseFI	GTSAC	1 cut(s)	2370
TseI	GCWGC	9 cut(s)	16, 518, 528, 1094, 1691, 1721, 1820, 2261, 2273
Tsp45I	GTSAC	1 cut(s)	2370
TspDTI	ATGAA	9 cut(s)	85, 454, 737, 1347, 1575, 1592, 1611, 1963, 2413
TspGWI	ACGGA	2 cut(s)	1890, 2450
TspRI	CASTG	5 cut(s)	460, 904, 976, 1180, 1369
VpaK11BI	GGWCC	2 cut(s)	1370, 2458
XagI	CCTNNNNNAGG	1 cut(s)	1534
XapI	RAATTY	5 cut(s)	1443, 1548, 1562, 1598, 2024
XceI	RCATGY	6 cut(s)	554, 809, 1486, 1763, 1820, 2178
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1503
XhoI	CTCGAG	1 cut(s)	259
XmiI	GTMKAC	3 cut(s)	48, 78, 864
XmnI	GAANNNNTTC	2 cut(s)	1354, 1602
XspI	CTAG	6 cut(s)	44, 842, 941, 1796, 2270, 2337
Zsp2I	ATGCAT	3 cut(s)	1258, 1488, 2503

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.