Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0005114

Physical Location & Seq

Genomic Coordinates Forward (+)

9716974 .. 9725388

Gene Structure 8415 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g08210.15

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGGATTTGACGGAGCTGAAAACGGCGGTGGAGGAAGCGGAGCTCGTCGACGCCCACGCCCACAACATCGTCGCCGCCGACTCCACCATCCCCTTCATCAGCTGCTTCTCCGAAGCCACCGGCGACGCCTTATCCTACGCACCCCATTCCCTCTCCTTCAAGAGGAATTTGAAGGATGTCGCCGAGCTCTACGGATCGGAAAAAACCTTGCATGGAGTAGAAGAATACCGGAGACTCGCCGGATTGCAGGCAATTAGCTTGGCGTGCTTCAAAGCTGCAAGAATCTCTGTCATTCTCATTGATGATGGGTTGAGGTTTGACAAGAAGCTCGACATAGATTGGCATAAAAATTTCACGCCGGTTGTTGGCCAGATTTTGAGAATTGAGTATTTGGCTGAGGAAATTCTCAATGAAGAATTGCCCAGTGGATCGTCTTGGACACTGGATTTGTTCACCGAAAATATAGCTGCATATCGCTGTGGCCTGGAAATTAATACAAATGTTACTAGGGAAGATGCTGAGGAAGGTCTTGCTGATGTGTTACGTGCTGTACAGCCTGTTCGCATATCAAATAAAAGTTTTATCGACTTTATCTTCACTCGTAGTTTGGAGGTTGCTCTGCTTTTTGACTTGCCCATGCAGATACATACGGGTTTTGGTGATAAAGATTTGGATATGCGGCTATCCAATCCTCTTCATCTTCGGGATGTTCTTGAGGACAAGAGATTTTCTAAATGCCGTGTAGTTCTTTTACATGCATCCTACCCATTTTCAAAAGAAGCATCATACCTAGCCTCCATTTATCCCCAGGTGTACCTTGACTTTGGGTTGGCTGTCCCTAAGCTCAGTGTCCATGGGATGATATCTTCAGTCAAGGAACTTTTAGAGCTAGCTCCAATTAAGAAGGTGATGTTTAGCACTGACGGCTACGCATTTCCTGAAACTTTCTACTTAGGTGCAAAAAAAGCACGTGAAGTTGTTTTCTCTGTCCTACGGGATGCTTGCGCTGACGGCGATCTCTCAGTCCCTGAAGCTGTTGAGGCTGCTAAAGACATATTTTCACAAAATGCGATTCAGTTTTACAAGATTAATTATACTGTAAAATCTTCTGGTTCAAATAATTATGTATCACCCGACTTCGTGAAGGTGAACAGTAATGACTCAGAAAATGATGTCTCACTTGTTCGTGTTATCTGGGGTGATACTTCTGGACAACAGAGATGCCGTGTTGTTCCCAAAAAGCGATTCAATGATGTTGTTATAAAAAATGGTATTGGTTTGACTTTCGCCTCTATGGGAATGACTTCATTCGTTGATGGTCCGGCTGATGAGACTAATTTGACTGGAGTGGGTGAGATCAGACTCATGCCTGATTTATCGACTAAACGGAAAATTCCATGGGTAGAACAAGAGGAGATGGTTTTGGCCGATATGCATCTAAAACCGGGTGAAGCATGGGAATACTGCCCAAGAGAAGCCTTGCGTAGGGTTTCAAAAATTTTGAAAGATGATTTTAACTTGGATATGAACGCAGGATTTGAGAATGAGTTTTTTCTCTTGAAGGGTATACTAAGGGATGGGAGGGAGGAATTGATCCCATTTGACTCAACACCCTACTGCTCTGCATCAGCATATGATTCTGCTTCCTATTTATTTCACGAAATTGTTCCTGCTCTTCATTCATTGAATATTACCGTGGAGCAGTTACATGCAGAAGCTGGGAAAGGTCAATTTGAGATGGTACTTGGGCACACAGCTTGTATGCATGCTGCTGACAACCTGATTTATACTCGTGAAGTTATTAGAGCCATTGCAAGGAAACATGGATTGTTGGCAACTTTCATGCCTAAGTATGCTCTTGATGACATTGGCTCTGGCGCGCATGTACATCTTAGTTTGTGGCAGAATGGCACAAATGTGTTTACGGCATCTGGTGGTTCCTCTCGGCATGGAATGTCAAAGATTGGGGAAGAATTCATGGCAGGGGTTTTACACCATCTTCCTGCAATTTTGGCATTTATAGCACCGATTCCAAATAGTTATGACCGAATTCAACCTAATACATGGAGTGGAGCATACAAGTGTTGGGGAAAAGAAAACAGAGAAGCTCCGTTAAGAACTGCATGCCCACCTGGAATACAAGCTGGTTTGGTGAGCAACTTTGAGGTTAAATCATTTGATGGATGTGCAAATCCACACTTAGGCTTGGCTGCAATACTTGCTGCTGGTATTGATGGTCTTAGGAATCATCTTCATCTCCCTGAACCTGTTGATACAAATCCTTCTGGCCTTGGTGCAGAAGTAGAAAGGTTGCCGAAATCACTTTCTGAATCTTTAGAAGCTCTCAAGGAAGACAATTTGTTTGCAGATTTACTTGGGGAAAACCTATTGGTTGCGATAAAAGGGGTCCGCAAGGCAGAGATTGACTACTACTCGAAGAACAAAGATGCATACAAGCAACTTATATACCGCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000905 GO:0001896 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009403 GO:0009404 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010720 GO:0010913 GO:0010914 GO:0012501 GO:0018130 GO:0019222 GO:0019438 GO:0019748 GO:0019954 GO:0022414 GO:0030154 GO:0030436 GO:0030582 GO:0030584 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0034305 GO:0043385 GO:0043386 GO:0043455 GO:0043934 GO:0043937 GO:0043938 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0045460 GO:0045461 GO:0045595 GO:0045597 GO:0046483 GO:0048315 GO:0048468 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0060284 GO:0061458 GO:0061794 GO:0065007 GO:0071704 GO:0075259 GO:0075306 GO:0075307 GO:1900376 GO:1900378 GO:1901360 GO:1901362 GO:1901376 GO:1901378 GO:1901576 GO:1903664 GO:1903666

KEGG Pathways

Metabolic & Signaling

ko00220 ko00250 ko00630 ko00910 ko01100 ko01120 ko01230 ko02020 ko04217 ko04724 ko04727 map00220 map00250 map00630 map00910 map01100 map01120 map01230 map02020 map04217 map04724 map04727

Pfam Domains

Protein Families

Amidohydro_2 Gln-synt_C Gln-synt_N_2

Protein Analysis

826

Amino Acids

91.58

Weight (kDa)

5.44

Isoelectric Point (pI)

38.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53180
fragaria_vesca	FvH4_6g16930 FvH4_6g16930 FvH4_6g16930
malus_domestica	MD00G1214800.v1.1 MD13G1277900.v1.1
prunus_persica	Prupe.7G124800_v2.0.a1 Prupe.7G124800_v2.0.a1
pyrus_communis	pycom04g08210
rosa_chinensis	RchiOBHm_Chr3g0470971 RchiOBHm_Chr5g0018301
rosa_laevigata	RLG00000024228
rosa_multiflora	Rmu_sc0005264.1_g000001 Rmu_sc0011919.1_g000005
rosa_roxburghii	Rroxscaffold_6G00410370
rosa_rugosa	Rorug03G0114300 Rorug03G0114300 Rorug03G0114400 Rorug05G0041200 Rorug05G0041200
rosa_samantha	Rh3AG164000 Rh3BG189600 Rh3CG179500 Rh3DG186600 Rh5AG134300 Rh5BG133100 Rh5CG144800 Rh5DG134500
rosa_wichuraiana	Rw3G015430 Rw5G011740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1262
AccI	GTMKAC	2 cut(s)	48, 1567
AccII	CGCG	1 cut(s)	1880
AciI	CCGC	6 cut(s)	26, 38, 75, 679, 2410, 2470
AclWI	GGATC	3 cut(s)	202, 436, 1588
AcoI	YGGCCR	2 cut(s)	367, 1425
AcsI	RAATTY	7 cut(s)	166, 349, 402, 1392, 1497, 1973, 2049
AcuI	CTGAAG	2 cut(s)	852, 1050
AcvI	CACGTG	1 cut(s)	971
AcyI	GRCGYC	2 cut(s)	51, 126
AfaI	GTAC	4 cut(s)	552, 815, 1743, 1887
AfiI	CCNNNNNNNGG	5 cut(s)	162, 365, 1485, 1815, 2201
AjnI	CCWGG	3 cut(s)	483, 807, 2131
AjuI	GAANNNNNNNTTGG	2 cut(s)	1229, 1261
AleI	CACNNNNGTG	1 cut(s)	1916
Alw21I	GWGCWC	2 cut(s)	45, 189
Alw26I	GTCTC	3 cut(s)	226, 1180, 1325
AlwI	GGATC	3 cut(s)	202, 436, 1588
AlwNI	CAGNNNCTG	2 cut(s)	1028, 1718
AoxI	GGCC	4 cut(s)	367, 481, 1425, 2287
ApeKI	GCWGC	7 cut(s)	102, 275, 467, 1043, 1769, 2210, 2222
ApoI	RAATTY	7 cut(s)	166, 349, 402, 1392, 1497, 1973, 2049
ArsI	GACNNNNNNTTYG	4 cut(s)	430, 462, 2345, 2377
AseI	ATTAAT	2 cut(s)	492, 1089
Asp700I	GAANNNNTTC	2 cut(s)	1303, 1665
AspLEI	GCGC	3 cut(s)	1007, 1880, 1882
AspS9I	GGNCC	2 cut(s)	1319, 2407
AsuC2I	CCSGG	1 cut(s)	1446
AsuHPI	GGTGA	9 cut(s)	445, 671, 919, 1122, 1159, 1211, 1364, 1460, 2164
AsuNHI	GCTAGC	1 cut(s)	889
AvaII	GGWCC	2 cut(s)	1319, 2407
BaeGI	GKGCMC	1 cut(s)	1752
BalI	TGGCCA	1 cut(s)	369
BanII	GRGCYC	2 cut(s)	45, 189
BauI	CACGAG	1 cut(s)	1791
BbrPI	CACGTG	1 cut(s)	971
BbsI	GAAGAC	1 cut(s)	2358
Bbv12I	GWGCWC	2 cut(s)	45, 189
BbvCI	CCTCAGC	2 cut(s)	396, 519
BbvI	GCAGC	7 cut(s)	89, 262, 454, 1030, 1756, 2197, 2209
BccI	CCATC	9 cut(s)	95, 299, 1310, 1411, 1571, 1732, 2004, 2174, 2228
BceAI	ACGGC	6 cut(s)	39, 723, 940, 1027, 1209, 1941
BciT130I	CCWGG	3 cut(s)	485, 809, 2133
BcnI	CCSGG	1 cut(s)	1446
BcoDI	GTCTC	3 cut(s)	226, 1180, 1325
BfaI	CTAG	3 cut(s)	507, 791, 890
BisI	GCNGC	9 cut(s)	75, 103, 276, 468, 680, 1044, 1770, 2211, 2223
BlsI	GCNGC	9 cut(s)	76, 104, 277, 469, 681, 1045, 1771, 2212, 2224
Bme1390I	CCNGG	4 cut(s)	485, 809, 1446, 2133
Bme18I	GGWCC	2 cut(s)	1319, 2407
BmgT120I	GGNCC	2 cut(s)	1319, 2407
BmiI	GGNNCC	2 cut(s)	1939, 2408
BmrFI	CCNGG	4 cut(s)	485, 809, 1446, 2133
BmrI	ACTGGG	1 cut(s)	417
BmsI	GCATC	9 cut(s)	505, 767, 791, 988, 1211, 1444, 1634, 1937, 2437
BmtI	GCTAGC	1 cut(s)	893
BmuI	ACTGGG	1 cut(s)	417
BpiI	GAAGAC	1 cut(s)	2358
BpmI	CTGGAG	1 cut(s)	1365
Bpu10I	CCTNAGC	3 cut(s)	396, 519, 840
BpuEI	CTTGAG	2 cut(s)	734, 2330
BpuMI	CCSGG	1 cut(s)	1446
BsaAI	YACGTR	2 cut(s)	545, 971
BsaBI	GATNNNNATC	2 cut(s)	1434, 2277
BsaHI	GRCGYC	2 cut(s)	51, 126
BsaJI	CCNNGG	5 cut(s)	807, 853, 1397, 1695, 2290
BsaWI	WCCGGW	1 cut(s)	228
BsaXI	ACNNNNNCTCC	2 cut(s)	779, 809
Bsc4I	CCNNNNNNNGG	5 cut(s)	162, 365, 1485, 1815, 2201
Bse118I	RCCGGY	2 cut(s)	119, 358
Bse1I	ACTGG	3 cut(s)	423, 447, 1348
Bse3DI	GCAATG	1 cut(s)	1809
Bse8I	GATNNNNATC	2 cut(s)	1434, 2277
BseBI	CCWGG	3 cut(s)	485, 809, 2133
BseDI	CCNNGG	5 cut(s)	807, 853, 1397, 1695, 2290
BseGI	GGATG	8 cut(s)	87, 181, 712, 758, 864, 1003, 1582, 2189
BseJI	GATNNNNATC	2 cut(s)	1434, 2277
BseLI	CCNNNNNNNGG	5 cut(s)	162, 365, 1485, 1815, 2201
BseMI	GCAATG	1 cut(s)	1809
BseMII	CTCAG	5 cut(s)	387, 510, 859, 1035, 1176
BseNI	ACTGG	3 cut(s)	423, 447, 1348
BsePI	GCGCGC	1 cut(s)	1878
BseRI	GAGGAG	1 cut(s)	1427
BseSI	GKGCMC	1 cut(s)	1752
BseXI	GCAGC	7 cut(s)	89, 262, 454, 1030, 1756, 2197, 2209
BseYI	CCCAGC	1 cut(s)	1718
BsgI	GTGCAG	1 cut(s)	2316
Bsh1236I	CGCG	1 cut(s)	1880
BshFI	GGCC	4 cut(s)	369, 483, 1427, 2289
BsiHKAI	GWGCWC	2 cut(s)	45, 189
BsiSI	CCGG	6 cut(s)	120, 229, 240, 359, 1322, 1445
BslFI	GGGAC	2 cut(s)	821, 1010
BslI	CCNNNNNNNGG	5 cut(s)	162, 365, 1485, 1815, 2201
BsmAI	GTCTC	3 cut(s)	226, 1180, 1325
BsmFI	GGGAC	2 cut(s)	821, 1010
BsnI	GGCC	4 cut(s)	369, 483, 1427, 2289
Bsp1286I	GDGCHC	3 cut(s)	45, 189, 1752
Bsp1407I	TGTACA	2 cut(s)	550, 1885
Bsp143I	GATC	5 cut(s)	194, 428, 1015, 1356, 1593
Bsp19I	CCATGG	2 cut(s)	853, 1397
BspACI	CCGC	6 cut(s)	26, 38, 75, 679, 2410, 2470
BspANI	GGCC	4 cut(s)	369, 483, 1427, 2289
BspCNI	CTCAG	5 cut(s)	388, 511, 858, 1034, 1175
BspFNI	CGCG	1 cut(s)	1880
BspLI	GGNNCC	2 cut(s)	1939, 2408
BspOI	GCTAGC	1 cut(s)	893
BspPI	GGATC	3 cut(s)	202, 436, 1588
BspQI	GCTCTTC	1 cut(s)	1680
BsrDI	GCAATG	1 cut(s)	1809
BsrFI	RCCGGY	2 cut(s)	119, 358
BsrGI	TGTACA	2 cut(s)	550, 1885
BsrI	ACTGG	3 cut(s)	423, 447, 1348
BssAI	RCCGGY	2 cut(s)	119, 358
BssECI	CCNNGG	5 cut(s)	807, 853, 1397, 1695, 2290
BssHII	GCGCGC	1 cut(s)	1878
BssMI	GATC	5 cut(s)	194, 428, 1015, 1356, 1593
BssNAI	GTATAC	1 cut(s)	1568
BssNI	GRCGYC	2 cut(s)	51, 126
BssSI	CACGAG	1 cut(s)	1791
BssT1I	CCWWGG	3 cut(s)	853, 1397, 2290
Bst1107I	GTATAC	1 cut(s)	1568
Bst2BI	CACGAG	1 cut(s)	1791
Bst2UI	CCWGG	3 cut(s)	485, 809, 2133
Bst4CI	ACNGT	3 cut(s)	1099, 1154, 1696
Bst6I	CTCTTC	2 cut(s)	699, 1680
BstACI	GRCGYC	2 cut(s)	51, 126
BstAPI	GCANNNNNTGC	1 cut(s)	2219
BstAUI	TGTACA	2 cut(s)	550, 1885
BstBAI	YACGTR	2 cut(s)	545, 971
BstC8I	GCNNGC	7 cut(s)	249, 265, 891, 1003, 1767, 1880, 2125
BstDSI	CCRYGG	3 cut(s)	853, 1397, 1695
BstENI	CCTNNNNNAGG	2 cut(s)	160, 1483
BstF5I	GGATG	8 cut(s)	87, 181, 712, 758, 864, 1003, 1582, 2189
BstFNI	CGCG	1 cut(s)	1880
BstHHI	GCGC	3 cut(s)	1007, 1880, 1882
BstKTI	GATC	5 cut(s)	197, 431, 1018, 1359, 1596
BstMAI	GTCTC	3 cut(s)	226, 1180, 1325
BstMBI	GATC	5 cut(s)	194, 428, 1015, 1356, 1593
BstMWI	GCNNNNNNNGC	8 cut(s)	264, 924, 965, 1011, 1040, 2012, 2021, 2219
BstNI	CCWGG	3 cut(s)	485, 809, 2133
BstNSI	RCATGY	5 cut(s)	758, 1712, 1769, 1886, 2127
BstSCI	CCNGG	4 cut(s)	483, 807, 1444, 2131
BstSLI	GKGCMC	1 cut(s)	1752
BstUI	CGCG	1 cut(s)	1880
BstV1I	GCAGC	7 cut(s)	89, 262, 454, 1030, 1756, 2197, 2209
BstV2I	GAAGAC	1 cut(s)	2358
BstZ17I	GTATAC	1 cut(s)	1568
BsuRI	GGCC	4 cut(s)	369, 483, 1427, 2289
BtgI	CCRYGG	3 cut(s)	853, 1397, 1695
BtsCI	GGATG	8 cut(s)	87, 181, 712, 758, 864, 1003, 1582, 2189
BtsIMutI	CAGTG	4 cut(s)	430, 440, 853, 918
Cac8I	GCNNGC	7 cut(s)	249, 265, 891, 1003, 1767, 1880, 2125
CaiI	CAGNNNCTG	2 cut(s)	1028, 1718
CfoI	GCGC	3 cut(s)	1007, 1880, 1882
Cfr10I	RCCGGY	2 cut(s)	119, 358
Cfr13I	GGNCC	2 cut(s)	1319, 2407
CseI	GACGC	2 cut(s)	59, 134
Csp6I	GTAC	4 cut(s)	551, 814, 1742, 1886
CviQI	GTAC	4 cut(s)	551, 814, 1742, 1886
DpnI	GATC	5 cut(s)	196, 430, 1017, 1358, 1595
DpnII	GATC	5 cut(s)	194, 428, 1015, 1356, 1593
EaeI	YGGCCR	2 cut(s)	367, 1425
Eam1104I	CTCTTC	2 cut(s)	699, 1680
EarI	CTCTTC	2 cut(s)	699, 1680
Ecl136II	GAGCTC	2 cut(s)	43, 187
Eco130I	CCWWGG	3 cut(s)	853, 1397, 2290
Eco24I	GRGCYC	2 cut(s)	45, 189
Eco32I	GATATC	1 cut(s)	864
Eco47I	GGWCC	2 cut(s)	1319, 2407
Eco53kI	GAGCTC	2 cut(s)	43, 187
Eco57I	CTGAAG	2 cut(s)	852, 1050
Eco72I	CACGTG	1 cut(s)	971
EcoICRI	GAGCTC	2 cut(s)	43, 187
EcoNI	CCTNNNNNAGG	2 cut(s)	160, 1483
EcoRI	GAATTC	2 cut(s)	1973, 2049
EcoRII	CCWGG	3 cut(s)	483, 807, 2131
EcoRV	GATATC	1 cut(s)	864
EcoT14I	CCWWGG	3 cut(s)	853, 1397, 2290
EcoT22I	ATGCAT	4 cut(s)	760, 1437, 1767, 2452
EcoT38I	GRGCYC	2 cut(s)	45, 189
ErhI	CCWWGG	3 cut(s)	853, 1397, 2290
FaqI	GGGAC	2 cut(s)	821, 1010
FauNDI	CATATG	1 cut(s)	1633
FblI	GTMKAC	2 cut(s)	48, 1567
Fnu4HI	GCNGC	9 cut(s)	75, 103, 276, 468, 680, 1044, 1770, 2211, 2223
FokI	GGATG	8 cut(s)	74, 188, 719, 745, 871, 1010, 1589, 2196
FriOI	GRGCYC	2 cut(s)	45, 189
Fsp4HI	GCNGC	9 cut(s)	75, 103, 276, 468, 680, 1044, 1770, 2211, 2223
FspBI	CTAG	3 cut(s)	507, 791, 890
GlaI	GCGC	3 cut(s)	1006, 1879, 1881
GluI	GCNGC	9 cut(s)	75, 103, 276, 468, 680, 1044, 1770, 2211, 2223
GsaI	CCCAGC	1 cut(s)	1722
GsuI	CTGGAG	1 cut(s)	1365
HaeIII	GGCC	4 cut(s)	369, 483, 1427, 2289
HapII	CCGG	6 cut(s)	120, 229, 240, 359, 1322, 1445
HgaI	GACGC	2 cut(s)	59, 134
HhaI	GCGC	3 cut(s)	1007, 1880, 1882
Hin1I	GRCGYC	2 cut(s)	51, 126
Hin6I	GCGC	3 cut(s)	1005, 1878, 1880
HinP1I	GCGC	3 cut(s)	1005, 1878, 1880
HincII	GTYRAC	1 cut(s)	49
HindII	GTYRAC	1 cut(s)	49
HpaII	CCGG	6 cut(s)	120, 229, 240, 359, 1322, 1445
HphI	GGTGA	9 cut(s)	445, 671, 919, 1122, 1159, 1211, 1364, 1460, 2164
Hpy166II	GTNNAC	6 cut(s)	49, 453, 814, 1150, 1568, 1923
Hpy188I	TCNGA	5 cut(s)	112, 199, 1165, 1361, 2329
Hpy8I	GTNNAC	6 cut(s)	49, 453, 814, 1150, 1568, 1923
Hpy99I	CGWCG	4 cut(s)	50, 53, 74, 128
HpyAV	CCTTC	8 cut(s)	103, 166, 166, 518, 898, 1138, 1555, 2292
HpyCH4III	ACNGT	3 cut(s)	1099, 1154, 1696
HpyCH4IV	ACGT	2 cut(s)	544, 970
HpyF10VI	GCNNNNNNNGC	8 cut(s)	264, 924, 965, 1011, 1040, 2012, 2021, 2219
HpySE526I	ACGT	2 cut(s)	544, 970
Hsp92I	GRCGYC	2 cut(s)	51, 126
HspAI	GCGC	3 cut(s)	1005, 1878, 1880
Kzo9I	GATC	5 cut(s)	194, 428, 1015, 1356, 1593
LguI	GCTCTTC	1 cut(s)	1680
LmnI	GCTCC	6 cut(s)	13, 40, 898, 1699, 2072, 2113
Lsp1109I	GCAGC	7 cut(s)	89, 262, 454, 1030, 1756, 2197, 2209
LweI	GCATC	9 cut(s)	505, 767, 791, 988, 1211, 1444, 1634, 1937, 2437
MaeI	CTAG	3 cut(s)	507, 791, 890
MaeII	ACGT	2 cut(s)	544, 970
MaeIII	GTNAC	3 cut(s)	502, 540, 1704
MalI	GATC	5 cut(s)	196, 430, 1017, 1358, 1595
MboI	GATC	5 cut(s)	194, 428, 1015, 1356, 1593
MhlI	GDGCHC	3 cut(s)	45, 189, 1752
MlsI	TGGCCA	1 cut(s)	369
MluNI	TGGCCA	1 cut(s)	369
MlyI	GAGTC	5 cut(s)	74, 228, 1154, 1356, 1598
Mox20I	TGGCCA	1 cut(s)	369
Mph1103I	ATGCAT	4 cut(s)	760, 1437, 1767, 2452
MroXI	GAANNNNTTC	2 cut(s)	1303, 1665
MscI	TGGCCA	1 cut(s)	369
MseI	TTAA	6 cut(s)	492, 900, 1089, 1515, 2114, 2169
MslI	CAYNNNNRTG	2 cut(s)	1916, 2080
Msp20I	TGGCCA	1 cut(s)	369
MspA1I	CMGCKG	1 cut(s)	102
MspI	CCGG	6 cut(s)	120, 229, 240, 359, 1322, 1445
MspR9I	CCNGG	4 cut(s)	485, 809, 1446, 2133
MvaI	CCWGG	3 cut(s)	485, 809, 2133
MvnI	CGCG	1 cut(s)	1880
MwoI	GCNNNNNNNGC	8 cut(s)	264, 924, 965, 1011, 1040, 2012, 2021, 2219
NciI	CCSGG	1 cut(s)	1446
NcoI	CCATGG	2 cut(s)	853, 1397
NdeI	CATATG	1 cut(s)	1633
NdeII	GATC	5 cut(s)	194, 428, 1015, 1356, 1593
NheI	GCTAGC	1 cut(s)	889
NlaIV	GGNNCC	2 cut(s)	1939, 2408
NmeAIII	GCCGAG	2 cut(s)	208, 1924
NsiI	ATGCAT	4 cut(s)	760, 1437, 1767, 2452
NspI	RCATGY	5 cut(s)	758, 1712, 1769, 1886, 2127
OliI	CACNNNNGTG	1 cut(s)	1916
PaeI	GCATGC	2 cut(s)	1769, 2127
PauI	GCGCGC	1 cut(s)	1878
PciSI	GCTCTTC	1 cut(s)	1680
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PdmI	GAANNNNTTC	2 cut(s)	1303, 1665
PfeI	GAWTC	7 cut(s)	282, 1072, 1245, 1637, 2029, 2245, 2330
PkrI	GCNGC	9 cut(s)	76, 104, 277, 469, 681, 1045, 1771, 2212, 2224
PleI	GAGTC	5 cut(s)	74, 228, 1154, 1356, 1598
PmaCI	CACGTG	1 cut(s)	971
PmlI	CACGTG	1 cut(s)	971
PpsI	GAGTC	5 cut(s)	74, 228, 1154, 1356, 1598
Ppu21I	YACGTR	2 cut(s)	545, 971
PshBI	ATTAAT	2 cut(s)	492, 1089
PsiI	TTATAA	1 cut(s)	1262
Psp124BI	GAGCTC	2 cut(s)	45, 189
Psp6I	CCWGG	3 cut(s)	483, 807, 2131
PspCI	CACGTG	1 cut(s)	971
PspFI	CCCAGC	1 cut(s)	1718
PspGI	CCWGG	3 cut(s)	483, 807, 2131
PspN4I	GGNNCC	2 cut(s)	1939, 2408
PspPI	GGNCC	2 cut(s)	1319, 2407
PsrI	GAACNNNNNNTAC	2 cut(s)	543, 575
PstNI	CAGNNNCTG	2 cut(s)	1028, 1718
PteI	GCGCGC	1 cut(s)	1878
PvuII	CAGCTG	1 cut(s)	102
RsaI	GTAC	4 cut(s)	552, 815, 1743, 1887
RsaNI	GTAC	4 cut(s)	551, 814, 1742, 1886
RseI	CAYNNNNRTG	2 cut(s)	1916, 2080
SacI	GAGCTC	2 cut(s)	45, 189
SalI	GTCGAC	1 cut(s)	47
SapI	GCTCTTC	1 cut(s)	1680
SaqAI	TTAA	6 cut(s)	492, 900, 1089, 1515, 2114, 2169
SatI	GCNGC	9 cut(s)	75, 103, 276, 468, 680, 1044, 1770, 2211, 2223
Sau3AI	GATC	5 cut(s)	194, 428, 1015, 1356, 1593
Sau96I	GGNCC	2 cut(s)	1319, 2407
SchI	GAGTC	5 cut(s)	74, 228, 1154, 1356, 1598
ScrFI	CCNGG	4 cut(s)	485, 809, 1446, 2133
SduI	GDGCHC	3 cut(s)	45, 189, 1752
SfaNI	GCATC	9 cut(s)	505, 767, 791, 988, 1211, 1444, 1634, 1937, 2437
SgrAI	CRCCGGYG	1 cut(s)	119
SgrDI	CGTCGACG	1 cut(s)	47
SinI	GGWCC	2 cut(s)	1319, 2407
SmiMI	CAYNNNNRTG	2 cut(s)	1916, 2080
SmlI	CTYRAG	2 cut(s)	713, 2345
SmoI	CTYRAG	2 cut(s)	713, 2345
SphI	GCATGC	2 cut(s)	1769, 2127
SsiI	CCGC	6 cut(s)	26, 38, 75, 679, 2410, 2470
SspI	AATATT	1 cut(s)	1690
SspMI	CTAG	3 cut(s)	507, 791, 890
SstI	GAGCTC	2 cut(s)	45, 189
StyD4I	CCNGG	4 cut(s)	483, 807, 1444, 2131
StyI	CCWWGG	3 cut(s)	853, 1397, 2290
TaaI	ACNGT	3 cut(s)	1099, 1154, 1696
TaiI	ACGT	2 cut(s)	547, 973
TaqI	TCGA	5 cut(s)	48, 330, 585, 1379, 2435
TaqII	GACCGA	1 cut(s)	2061
TatI	WGTACW	2 cut(s)	550, 1885
TauI	GCSGC	2 cut(s)	77, 682
TfiI	GAWTC	7 cut(s)	282, 1072, 1245, 1637, 2029, 2245, 2330
Tru1I	TTAA	6 cut(s)	492, 900, 1089, 1515, 2114, 2169
Tru9I	TTAA	6 cut(s)	492, 900, 1089, 1515, 2114, 2169
TscAI	CASTG	4 cut(s)	430, 447, 853, 925
TseI	GCWGC	7 cut(s)	102, 275, 467, 1043, 1769, 2210, 2222
TspGWI	ACGGA	4 cut(s)	26, 207, 1402, 2100
TspRI	CASTG	4 cut(s)	430, 447, 853, 925
VpaK11BI	GGWCC	2 cut(s)	1319, 2407
VspI	ATTAAT	2 cut(s)	492, 1089
XagI	CCTNNNNNAGG	2 cut(s)	160, 1483
XapI	RAATTY	7 cut(s)	166, 349, 402, 1392, 1497, 1973, 2049
XceI	RCATGY	5 cut(s)	758, 1712, 1769, 1886, 2127
XmiI	GTMKAC	2 cut(s)	48, 1567
XmnI	GAANNNNTTC	2 cut(s)	1303, 1665
XspI	CTAG	3 cut(s)	507, 791, 890
Zsp2I	ATGCAT	4 cut(s)	760, 1437, 1767, 2452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.