Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005114

Physical Location & Seq

Genomic Coordinates Reverse (-)

3550933 .. 3554270

Gene Structure 3338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0041200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1290 bp

ATGACGTCACTCCACCCCTCCGAGATGGACACCGACTCCGTCACCTCCACTCCGCGATCCGACCACCCCTCAAACGATCAGACACGTGTACGTTTCATGTGCAGCTTCGGCGGGAAGATCCTCCCGCGGCCCCACGATAACCAGCTCCGTTACGTCGGCGGCGACACCAGAATTGTCGCCGTGCAACGCGCCACCACTTACGGCTCCCTCCTCTCCAAGCTCTCCAAACTCTCAGGACTGAGTAACGTGACCGTCAAGTACCAGCTTCCGAACGAGGAACTGGATGCTCTGATCTCCGTCACGACGGACGAGGACGTCGACAACATGATGGACGAGTACGACCGCATCACACAGAATCAAAACCCGAAAGCGGCTCGGCTCCGCCTCTTTCTCTTCCCCAAAGGCGACGACGACTCGGCTTCCCGAACCTCCAGCATCAGCTCGCTCCTCGACGGCTCGGCTAAGCGCGAGCACTGGTTCCTCGACGCGCTCAACAGCGGCGCATCGAACGCTTCGCTCCTCGAGCGCGGCCGTTCTGAAGCCTCCTCGATTCTCTCCGAAGTGCCGGACTATCTATTCGGGTTGGACAACTCCGACGACACTCACAACCGGGAGTTCAGAGCGAAGACCCGACCCGGGGTTTTACAGGACAACGTATCGGCTTCGGATCCCGGTTCTCCCGCTCCGGTTATCTCGTCGCCGTTTTGCTCCACGTCGTCTAATCCCTCCGTGCCGTCGCTGCCGAATCTCCCGCCGGTGAAGACCAAGCCGGATTCGAAGCCGGAGACGAGAGAGAATCAGTCGGAGGGTTTTGCAGAGACGACGGCGGAGTTGCCCGTTTCGCAAGCAACAGGGTTTTCGGGTAATGCCGGGTTGCATTATATCCAGGACCCGAATTATCCGGGTCATGTTGTGCGCTCAGTACCGGTTTATTATTACCCGGCTCCGGTTCAACCGGCAAACGTACCGGTCCAGCAGGTTCAAATACGGACTCCGTATATGCCTCAGCAATACCAGGCTCTACCGGGTCAGATACCGGTCGGGTATCATAATCAGATGCCGGGTATGGGCCAGGTTTATGGTGGAGGGTTAAGGCCCGTTGCGGGAATGGACCAGTATGACGTGTCGGGTAGGGTTGTTTCTGATGGAGTGAACCAGCAGGTGTACTATGGGGTGAGGAATGGTGGTGTGGTTCCGGGATATAATCCGGCAAGGGTGGTGCAATCGGGGGAAGAATGGCAAGGAAATGGATCCGATATCAATGCGGGTCGCGCCCCGAATGGATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000905 GO:0001896 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009403 GO:0009404 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010720 GO:0010913 GO:0010914 GO:0012501 GO:0018130 GO:0019222 GO:0019438 GO:0019748 GO:0019954 GO:0022414 GO:0030154 GO:0030436 GO:0030582 GO:0030584 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0034305 GO:0043385 GO:0043386 GO:0043455 GO:0043934 GO:0043937 GO:0043938 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0045460 GO:0045461 GO:0045595 GO:0045597 GO:0046483 GO:0048315 GO:0048468 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0060284 GO:0061458 GO:0061794 GO:0065007 GO:0071704 GO:0075259 GO:0075306 GO:0075307 GO:1900376 GO:1900378 GO:1901360 GO:1901362 GO:1901376 GO:1901378 GO:1901576 GO:1903664 GO:1903666

KEGG Pathways

Metabolic & Signaling

ko00220 ko00250 ko00630 ko00910 ko01100 ko01120 ko01230 ko02020 ko04217 ko04724 ko04727 map00220 map00250 map00630 map00910 map01100 map01120 map01230 map02020 map04217 map04724 map04727

Pfam Domains

Protein Families

Amidohydro_2 Gln-synt_C Gln-synt_N_2

Protein Analysis

429

Amino Acids

46.48

Weight (kDa)

5.33

Isoelectric Point (pI)

46.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PB1	PF00564	45 - 133	1e-18	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53180
fragaria_vesca	FvH4_6g16930 FvH4_6g16930 FvH4_6g16930
malus_domestica	MD00G1214800.v1.1 MD13G1277900.v1.1
prunus_persica	Prupe.7G124800_v2.0.a1 Prupe.7G124800_v2.0.a1
pyrus_communis	pycom04g08210
rosa_chinensis	RchiOBHm_Chr3g0470971 RchiOBHm_Chr5g0018301
rosa_laevigata	RLG00000024228
rosa_multiflora	Rmu_sc0005264.1_g000001 Rmu_sc0011919.1_g000005
rosa_roxburghii	Rroxscaffold_6G00410370
rosa_rugosa	Rorug03G0114300 Rorug03G0114300 Rorug03G0114400 Rorug05G0041200 Rorug05G0041200
rosa_samantha	Rh3AG164000 Rh3BG189600 Rh3CG179500 Rh3DG186600 Rh5AG134300 Rh5BG133100 Rh5CG144800 Rh5DG134500
rosa_wichuraiana	Rw3G015430 Rw5G011740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1150
AasI	GACNNNNNNGTC	1 cut(s)	314
AatII	GACGTC	2 cut(s)	8, 318
Acc36I	ACCTGC	2 cut(s)	967, 1150
AccBSI	CCGCTC	1 cut(s)	683
AccI	GTMKAC	1 cut(s)	318
AccII	CGCG	7 cut(s)	55, 127, 189, 468, 488, 528, 1272
AclWI	GGATC	6 cut(s)	51, 112, 662, 675, 1245, 1258
AcoI	YGGCCR	1 cut(s)	529
AcuI	CTGAAG	1 cut(s)	558
AcvI	CACGTG	1 cut(s)	86
AcyI	GRCGYC	2 cut(s)	5, 315
AfaI	GTAC	6 cut(s)	90, 260, 338, 924, 966, 1166
AfiI	CCNNNNNNNGG	6 cut(s)	370, 636, 637, 946, 1067, 1103
AflIII	ACRYGT	3 cut(s)	83, 85, 1122
AgeI	ACCGGT	3 cut(s)	925, 967, 1036
AgsI	TTSAA	2 cut(s)	953, 983
AjiI	CACGTC	2 cut(s)	714, 1123
AjnI	CCWGG	3 cut(s)	885, 1014, 1071
AluBI	AGCT	5 cut(s)	105, 145, 220, 265, 441
AluI	AGCT	5 cut(s)	105, 145, 220, 265, 441
Alw21I	GWGCWC	1 cut(s)	474
Alw26I	GTCTC	2 cut(s)	779, 812
AlwI	GGATC	6 cut(s)	51, 112, 662, 675, 1245, 1258
Ama87I	CYCGRG	2 cut(s)	521, 635
AoxI	GGCC	4 cut(s)	128, 529, 1069, 1094
ApeKI	GCWGC	2 cut(s)	102, 739
ArsI	GACNNNNNNTTYG	2 cut(s)	560, 592
AsiGI	ACCGGT	3 cut(s)	925, 967, 1036
AspLEI	GCGC	7 cut(s)	191, 468, 490, 503, 528, 918, 1274
AspS9I	GGNCC	6 cut(s)	129, 889, 970, 1069, 1095, 1111
AsuHPI	GGTGA	3 cut(s)	34, 769, 1186
AsuII	TTCGAA	1 cut(s)	776
AvaI	CYCGRG	2 cut(s)	521, 635
AvaII	GGWCC	3 cut(s)	889, 970, 1111
BamHI	GGATCC	2 cut(s)	667, 1250
BbrPI	CACGTG	1 cut(s)	86
BbsI	GAAGAC	2 cut(s)	632, 767
Bbv12I	GWGCWC	1 cut(s)	474
BbvCI	CCTCAGC	1 cut(s)	1005
BbvI	GCAGC	2 cut(s)	114, 726
BccI	CCATC	3 cut(s)	19, 322, 1139
BceAI	ACGGC	7 cut(s)	164, 217, 469, 516, 685, 718, 840
BcgI	CGANNNNNNTGC	2 cut(s)	1244, 1278
BciT130I	CCWGG	3 cut(s)	887, 1016, 1073
BcoDI	GTCTC	2 cut(s)	779, 812
BfuAI	ACCTGC	2 cut(s)	967, 1150
BisI	GCNGC	7 cut(s)	103, 128, 160, 372, 499, 529, 740
BlpI	GCTNAGC	1 cut(s)	462
BlsI	GCNGC	7 cut(s)	104, 129, 161, 373, 500, 530, 741
Bme18I	GGWCC	3 cut(s)	889, 970, 1111
BmeT110I	CYCGRG	2 cut(s)	521, 635
BmgBI	CACGTC	2 cut(s)	714, 1123
BmgT120I	GGNCC	6 cut(s)	129, 889, 970, 1069, 1095, 1111
BmiI	GGNNCC	9 cut(s)	131, 205, 380, 479, 669, 891, 945, 1194, 1252
BmsI	GCATC	5 cut(s)	274, 354, 444, 512, 1047
BpiI	GAAGAC	2 cut(s)	632, 767
BpmI	CTGGAG	1 cut(s)	415
Bpu10I	CCTNAGC	1 cut(s)	1005
Bpu1102I	GCTNAGC	1 cut(s)	462
Bpu14I	TTCGAA	1 cut(s)	776
BsaAI	YACGTR	1 cut(s)	86
BsaHI	GRCGYC	2 cut(s)	5, 315
BsaJI	CCNNGG	3 cut(s)	125, 635, 636
BsaWI	WCCGGW	5 cut(s)	685, 925, 946, 967, 1036
BsaXI	ACNNNNNCTCC	4 cut(s)	20, 34, 50, 64
Bsc4I	CCNNNNNNNGG	6 cut(s)	370, 636, 637, 946, 1067, 1103
Bse118I	RCCGGY	5 cut(s)	754, 925, 955, 967, 1036
Bse1I	ACTGG	3 cut(s)	285, 479, 1114
BseBI	CCWGG	3 cut(s)	887, 1016, 1073
BseDI	CCNNGG	3 cut(s)	125, 635, 636
BseGI	GGATG	1 cut(s)	289
BseLI	CCNNNNNNNGG	6 cut(s)	370, 636, 637, 946, 1067, 1103
BseMII	CTCAG	4 cut(s)	230, 246, 933, 1019
BseNI	ACTGG	3 cut(s)	285, 479, 1114
BseRI	GAGGAG	4 cut(s)	200, 437, 509, 535
BseX3I	CGGCCG	1 cut(s)	529
BseXI	GCAGC	2 cut(s)	114, 726
BsgI	GTGCAG	1 cut(s)	121
Bsh1236I	CGCG	7 cut(s)	55, 127, 189, 468, 488, 528, 1272
Bsh1285I	CGRYCG	3 cut(s)	343, 532, 1041
BshFI	GGCC	4 cut(s)	130, 531, 1071, 1096
BshTI	ACCGGT	3 cut(s)	925, 967, 1036
BsiEI	CGRYCG	3 cut(s)	343, 532, 1041
BsiHKAI	GWGCWC	1 cut(s)	474
BsiHKCI	CYCGRG	2 cut(s)	521, 635
BslI	CCNNNNNNNGG	6 cut(s)	370, 636, 637, 946, 1067, 1103
BsmAI	GTCTC	2 cut(s)	779, 812
BsmBI	CGTCTC	2 cut(s)	779, 812
BsnI	GGCC	4 cut(s)	130, 531, 1071, 1096
BsoBI	CYCGRG	2 cut(s)	521, 635
Bsp119I	TTCGAA	1 cut(s)	776
Bsp1286I	GDGCHC	1 cut(s)	474
Bsp143I	GATC	7 cut(s)	56, 76, 117, 291, 667, 1250, 1283
Bsp1720I	GCTNAGC	1 cut(s)	462
BspANI	GGCC	4 cut(s)	130, 531, 1071, 1096
BspCNI	CTCAG	4 cut(s)	231, 245, 932, 1018
BspFNI	CGCG	7 cut(s)	55, 127, 189, 468, 488, 528, 1272
BspLI	GGNNCC	9 cut(s)	131, 205, 380, 479, 669, 891, 945, 1194, 1252
BspMI	ACCTGC	2 cut(s)	967, 1150
BspPI	GGATC	6 cut(s)	51, 112, 662, 675, 1245, 1258
BspT104I	TTCGAA	1 cut(s)	776
BsrBI	CCGCTC	1 cut(s)	683
BsrFI	RCCGGY	5 cut(s)	754, 925, 955, 967, 1036
BsrI	ACTGG	3 cut(s)	285, 479, 1114
BssAI	RCCGGY	5 cut(s)	754, 925, 955, 967, 1036
BssECI	CCNNGG	3 cut(s)	125, 635, 636
BssMI	GATC	7 cut(s)	56, 76, 117, 291, 667, 1250, 1283
BssNI	GRCGYC	2 cut(s)	5, 315
Bst2UI	CCWGG	3 cut(s)	887, 1016, 1073
Bst4CI	ACNGT	1 cut(s)	253
Bst6I	CTCTTC	1 cut(s)	398
BstACI	GRCGYC	2 cut(s)	5, 315
BstBAI	YACGTR	1 cut(s)	86
BstBI	TTCGAA	1 cut(s)	776
BstC8I	GCNNGC	3 cut(s)	443, 470, 846
BstDEI	CTNAG	5 cut(s)	232, 239, 462, 919, 1005
BstDSI	CCRYGG	1 cut(s)	125
BstF5I	GGATG	1 cut(s)	289
BstFNI	CGCG	7 cut(s)	55, 127, 189, 468, 488, 528, 1272
BstHHI	GCGC	7 cut(s)	191, 468, 490, 503, 528, 918, 1274
BstKTI	GATC	7 cut(s)	59, 79, 120, 294, 670, 1253, 1286
BstMAI	GTCTC	2 cut(s)	779, 812
BstMBI	GATC	7 cut(s)	56, 76, 117, 291, 667, 1250, 1283
BstMCI	CGRYCG	3 cut(s)	343, 532, 1041
BstMWI	GCNNNNNNNGC	6 cut(s)	108, 509, 523, 739, 841, 1271
BstNI	CCWGG	3 cut(s)	887, 1016, 1073
BstUI	CGCG	7 cut(s)	55, 127, 189, 468, 488, 528, 1272
BstV1I	GCAGC	2 cut(s)	114, 726
BstV2I	GAAGAC	2 cut(s)	632, 767
BstX2I	RGATCY	4 cut(s)	117, 667, 1250, 1283
BstXI	CCANNNNNNTGG	1 cut(s)	1079
BstYI	RGATCY	4 cut(s)	117, 667, 1250, 1283
BstZI	CGGCCG	1 cut(s)	529
BsuRI	GGCC	4 cut(s)	130, 531, 1071, 1096
BtgI	CCRYGG	1 cut(s)	125
BtrI	CACGTC	2 cut(s)	714, 1123
BtsCI	GGATG	1 cut(s)	289
BtsIMutI	CAGTG	1 cut(s)	472
BveI	ACCTGC	2 cut(s)	967, 1150
Cac8I	GCNNGC	3 cut(s)	443, 470, 846
CfoI	GCGC	7 cut(s)	191, 468, 490, 503, 528, 918, 1274
Cfr10I	RCCGGY	5 cut(s)	754, 925, 955, 967, 1036
Cfr13I	GGNCC	6 cut(s)	129, 889, 970, 1069, 1095, 1111
Cfr42I	CCGCGG	1 cut(s)	128
Cfr9I	CCCGGG	1 cut(s)	635
CseI	GACGC	1 cut(s)	494
Csp6I	GTAC	6 cut(s)	89, 259, 337, 923, 965, 1165
CspAI	ACCGGT	3 cut(s)	925, 967, 1036
CviAII	CATG	3 cut(s)	97, 325, 908
CviQI	GTAC	6 cut(s)	89, 259, 337, 923, 965, 1165
DdeI	CTNAG	5 cut(s)	232, 239, 462, 919, 1005
DpnI	GATC	7 cut(s)	58, 78, 119, 293, 669, 1252, 1285
DpnII	GATC	7 cut(s)	56, 76, 117, 291, 667, 1250, 1283
DrdI	GACNNNNNNGTC	1 cut(s)	314
DseDI	GACNNNNNNGTC	1 cut(s)	314
EaeI	YGGCCR	1 cut(s)	529
EagI	CGGCCG	1 cut(s)	529
Eam1104I	CTCTTC	1 cut(s)	398
EarI	CTCTTC	1 cut(s)	398
EciI	GGCGGA	2 cut(s)	371, 842
EclXI	CGGCCG	1 cut(s)	529
Eco32I	GATATC	1 cut(s)	1258
Eco47I	GGWCC	3 cut(s)	889, 970, 1111
Eco52I	CGGCCG	1 cut(s)	529
Eco57I	CTGAAG	1 cut(s)	558
Eco72I	CACGTG	1 cut(s)	86
Eco88I	CYCGRG	2 cut(s)	521, 635
EcoO109I	RGGNCCY	1 cut(s)	889
EcoRII	CCWGG	3 cut(s)	885, 1014, 1071
EcoRV	GATATC	1 cut(s)	1258
Esp3I	CGTCTC	2 cut(s)	779, 812
FaeI	CATG	3 cut(s)	100, 328, 911
FatI	CATG	3 cut(s)	96, 324, 907
FauI	CCCGC	6 cut(s)	104, 132, 688, 759, 1096, 1258
FblI	GTMKAC	1 cut(s)	318
Fnu4HI	GCNGC	7 cut(s)	103, 128, 160, 372, 499, 529, 740
FokI	GGATG	1 cut(s)	296
Fsp4HI	GCNGC	7 cut(s)	103, 128, 160, 372, 499, 529, 740
GlaI	GCGC	7 cut(s)	190, 467, 489, 502, 527, 917, 1273
GluI	GCNGC	7 cut(s)	103, 128, 160, 372, 499, 529, 740
GsuI	CTGGAG	1 cut(s)	415
HaeIII	GGCC	4 cut(s)	130, 531, 1071, 1096
HgaI	GACGC	1 cut(s)	494
HhaI	GCGC	7 cut(s)	191, 468, 490, 503, 528, 918, 1274
Hin1I	GRCGYC	2 cut(s)	5, 315
Hin1II	CATG	3 cut(s)	100, 328, 911
Hin6I	GCGC	7 cut(s)	189, 466, 488, 501, 526, 916, 1272
HinP1I	GCGC	7 cut(s)	189, 466, 488, 501, 526, 916, 1272
HincII	GTYRAC	1 cut(s)	319
HindII	GTYRAC	1 cut(s)	319
HinfI	GANTC	8 cut(s)	35, 355, 413, 550, 745, 773, 796, 991
HphI	GGTGA	3 cut(s)	34, 769, 1186
Hpy166II	GTNNAC	4 cut(s)	89, 319, 1153, 1165
Hpy188III	TCNNGA	4 cut(s)	234, 301, 423, 1287
Hpy8I	GTNNAC	4 cut(s)	89, 319, 1153, 1165
HpyCH4III	ACNGT	1 cut(s)	253
HpyCH4V	TGCA	5 cut(s)	102, 184, 815, 877, 1222
HpyF10VI	GCNNNNNNNGC	6 cut(s)	108, 509, 523, 739, 841, 1271
HpyF3I	CTNAG	5 cut(s)	232, 239, 462, 919, 1005
Hsp92I	GRCGYC	2 cut(s)	5, 315
Hsp92II	CATG	3 cut(s)	100, 328, 911
HspAI	GCGC	7 cut(s)	189, 466, 488, 501, 526, 916, 1272
KspI	CCGCGG	1 cut(s)	128
Kzo9I	GATC	7 cut(s)	56, 76, 117, 291, 667, 1250, 1283
LmnI	GCTCC	8 cut(s)	150, 209, 384, 450, 522, 688, 713, 949
Lsp1109I	GCAGC	2 cut(s)	114, 726
LweI	GCATC	5 cut(s)	274, 354, 444, 512, 1047
MaeIII	GTNAC	6 cut(s)	6, 40, 149, 242, 247, 298
MalI	GATC	7 cut(s)	58, 78, 119, 293, 669, 1252, 1285
MbiI	CCGCTC	1 cut(s)	683
MboI	GATC	7 cut(s)	56, 76, 117, 291, 667, 1250, 1283
MboII	GAAGA	5 cut(s)	127, 385, 637, 772, 1244
MflI	RGATCY	4 cut(s)	117, 667, 1250, 1283
MhlI	GDGCHC	1 cut(s)	474
MluCI	AATT	2 cut(s)	171, 895
MlyI	GAGTC	3 cut(s)	29, 407, 985
MmeI	TCCRAC	4 cut(s)	84, 564, 618, 783
MseI	TTAA	1 cut(s)	1091
MspA1I	CMGCKG	2 cut(s)	127, 498
MvaI	CCWGG	3 cut(s)	887, 1016, 1073
MvnI	CGCG	7 cut(s)	55, 127, 189, 468, 488, 528, 1272
MwoI	GCNNNNNNNGC	6 cut(s)	108, 509, 523, 739, 841, 1271
NdeII	GATC	7 cut(s)	56, 76, 117, 291, 667, 1250, 1283
NlaIII	CATG	3 cut(s)	100, 328, 911
NlaIV	GGNNCC	9 cut(s)	131, 205, 380, 479, 669, 891, 945, 1194, 1252
NmeAIII	GCCGAG	3 cut(s)	355, 395, 437
NmuCI	GTSAC	4 cut(s)	6, 40, 247, 298
NspV	TTCGAA	1 cut(s)	776
PaeR7I	CTCGAG	1 cut(s)	521
PaqCI	CACCTGC	1 cut(s)	1150
PcsI	WCGNNNNNNNCGW	2 cut(s)	159, 315
PfeI	GAWTC	5 cut(s)	355, 550, 745, 773, 796
PflFI	GACNNNGTC	1 cut(s)	38
PfoI	TCCNGGA	2 cut(s)	885, 1195
PinAI	ACCGGT	3 cut(s)	925, 967, 1036
PkrI	GCNGC	7 cut(s)	104, 129, 161, 373, 500, 530, 741
PleI	GAGTC	3 cut(s)	29, 407, 985
PmaCI	CACGTG	1 cut(s)	86
PmlI	CACGTG	1 cut(s)	86
PpsI	GAGTC	3 cut(s)	29, 407, 985
Ppu21I	YACGTR	1 cut(s)	86
PpuMI	RGGWCCY	1 cut(s)	889
Psp5II	RGGWCCY	1 cut(s)	889
Psp6I	CCWGG	3 cut(s)	885, 1014, 1071
PspCI	CACGTG	1 cut(s)	86
PspGI	CCWGG	3 cut(s)	885, 1014, 1071
PspN4I	GGNNCC	9 cut(s)	131, 205, 380, 479, 669, 891, 945, 1194, 1252
PspPI	GGNCC	6 cut(s)	129, 889, 970, 1069, 1095, 1111
PspPPI	RGGWCCY	1 cut(s)	889
PspXI	VCTCGAGB	1 cut(s)	521
PsuI	RGATCY	4 cut(s)	117, 667, 1250, 1283
PsyI	GACNNNGTC	1 cut(s)	38
RsaI	GTAC	6 cut(s)	90, 260, 338, 924, 966, 1166
RsaNI	GTAC	6 cut(s)	89, 259, 337, 923, 965, 1165
SacII	CCGCGG	1 cut(s)	128
SalI	GTCGAC	1 cut(s)	317
SaqAI	TTAA	1 cut(s)	1091
SatI	GCNGC	7 cut(s)	103, 128, 160, 372, 499, 529, 740
Sau3AI	GATC	7 cut(s)	56, 76, 117, 291, 667, 1250, 1283
Sau96I	GGNCC	6 cut(s)	129, 889, 970, 1069, 1095, 1111
SchI	GAGTC	3 cut(s)	29, 407, 985
SduI	GDGCHC	1 cut(s)	474
SfaNI	GCATC	5 cut(s)	274, 354, 444, 512, 1047
Sfr274I	CTCGAG	1 cut(s)	521
Sfr303I	CCGCGG	1 cut(s)	128
SfuI	TTCGAA	1 cut(s)	776
SgrAI	CRCCGGYG	1 cut(s)	754
SgrBI	CCGCGG	1 cut(s)	128
SinI	GGWCC	3 cut(s)	889, 970, 1111
SlaI	CTCGAG	1 cut(s)	521
SmaI	CCCGGG	1 cut(s)	637
SmlI	CTYRAG	1 cut(s)	521
SmoI	CTYRAG	1 cut(s)	521
Sse9I	AATT	2 cut(s)	171, 895
TaaI	ACNGT	1 cut(s)	253
TaqI	TCGA	7 cut(s)	318, 450, 483, 506, 522, 548, 776
TasI	AATT	2 cut(s)	171, 895
TatI	WGTACW	1 cut(s)	1164
TauI	GCSGC	5 cut(s)	130, 162, 374, 501, 531
TfiI	GAWTC	5 cut(s)	355, 550, 745, 773, 796
Tru1I	TTAA	1 cut(s)	1091
Tru9I	TTAA	1 cut(s)	1091
TscAI	CASTG	1 cut(s)	479
TseFI	GTSAC	4 cut(s)	6, 40, 247, 298
TseI	GCWGC	2 cut(s)	102, 739
Tsp45I	GTSAC	4 cut(s)	6, 40, 247, 298
TspDTI	ATGAA	1 cut(s)	85
TspGWI	ACGGA	7 cut(s)	28, 137, 286, 320, 718, 984, 1003
TspMI	CCCGGG	1 cut(s)	635
TspRI	CASTG	1 cut(s)	479
Tth111I	GACNNNGTC	1 cut(s)	38
VpaK11BI	GGWCC	3 cut(s)	889, 970, 1111
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1079
XhoI	CTCGAG	1 cut(s)	521
XmaI	CCCGGG	1 cut(s)	635
XmiI	GTMKAC	1 cut(s)	318
ZraI	GACGTC	2 cut(s)	6, 316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.