Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0011367

Physical Location & Seq

Genomic Coordinates Forward (+)

18527830 .. 18530778

Gene Structure 2949 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g24430.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGAGTTTTCGGTACTTAGTTTGTAGGCAATCAGTTTCCAAAATCACCGCTAGGCTTAGGTCCCAGTACGCCGCTGCCTATGGTTTCGCAACCCTCACAGACCCAATACCCATTTCCACTCGTTCCGCAACTCATGCTGCCTTTAAACCTCTCCAAAACCCTAGGTCCCCAATTCCCTTCAATAGAGGGATCCACTCAGCTCAAGTGGTTGATTCCGTGGATTCGGAGGAGGAAGATGACGGAGGTGTCAACGAGTTCTTGTCCCGTTTCGTGTGGATTATGCGGCAGAAGCTCAATGTGGCCTACCCGGGTTGCGATAAAGAGACTGTTGATGGGATGCTGATGGTAATTGTGCAAAAGGTTGTGGAGGAGATGGAGGGGAGCGGGTTTGAGCACAAGCTTGGCCAAAGGCAGGCGGCGTCGGAGGACTTCAGTGAGGATTTGTGGACAACTGTGTGGGAGGTGAGCAATATGGTGATGGATGACATGCACAAGGAAGCCAAGAAGGAGAAAATGAAGGGGTTTCTGCACGCCGAGGAAGTCAAGGAGATGTGTAGGTTTGCTGGTGAAATTGGTATCCGAGGGGATATGCTTAGAGAGCTCAGGTTCAAGTGGGCTCGCGAGAAGATGGAGGAGACTGAGTTTTATGAGAGCTTGGAGCGTCTTCGAGAACAAGAGAAATCCCAAGAGAAAGGGGAGGGAGGAGAGGCTGTGCAGCAAGCTGAGGCGGAGGCTGGTGGAACTGAGCTGAATGCTGAGGTTGCCTCTCTTCCCAAGAGGCGTGGGAAGATAAGGTACAATATATATGGTCTCGATCTTTCTGATCCTAAGTGGGTTGAAGTTGCTGATAAAATCCATGAGGCAGGGGAGGTCATATGGCCCAAGGGACCGAAACCAATATCTGGGAAATGCAAATTGGTTACTGAGAAAATTCTTCAATCAACTGAGGCAGATGATCTGTGTCCACTTTTGGCTGAATGGGTAGAGTTGCTTCAACCTAATAGGATTGATTGGATCAATCTTCTTGATAAGTTGAAACAGCAGAACCCCGGGTTATACATTAAGGTGGCAGAACTTGTATTGGATGAGAAATCATTCCAGGCGAACATCCGTGACTACTCCACGCTTATCGATGCTTATGCCAAGAAAAATCAGCTAGAAGATGCTGAGAGAATTTTAAAGAAGATGACTGAAAATGGGCTTGAACTAGATTCTTTGACAGCCACTATTTTGGTCCACATGTACTGCAAGGCAGGTAATCTTGAACGTGCCAAGCAAGCACTTGAGTCATTGAGGAGCCAGGGCTTCCAACCTGATATGAAGGTTTACGATTCCATGATCAAGGCATATGTAAATGCTAACGAACCGAACTTGGGGGAGGCATTGTTGAGAGAAATGGAAGCAAGAAACATCAAACCCTCAAAAGAAATTTACATGGCATTGCTTCGATCATTTTCCCAACGCATTGATGTGAGAGGAGCGGAACGAATTGTCCAAACTATGTTGTTGGCAGGTTTTCAGCAAGATTTAGAATCTTGTTCAGTGCTTATTGAAGCATATGGGAAAGTTGGTGACCCTGATCAGGCAAGGTACAACTTTGATAACATAACAAAAGTTGGGCAAAAACCTGATGACAAGTGCACTGCGAGCATGATCGCAGCTTATGCAAAGAAGAATTTACTCGATAAGGCACTAGAGTTGTTGCTGCAGCTTGAAAAGGATGGCTTTGAGCCTGGAGTTGCTACTTACACGGTTCTTGTAGATTGGCTGGGAAAATTGCAGCTAGTTAGTGAGGCTGAACAGCTACTGGACAAAATTGCTCAGCTGGGTGAGGCTCCTCCAGTTCAACTTCATGTAAGCATTTGCAATATGTATGCTAGGGCTGGAGTTGAGAAAAAGGCACTACAAGCTTTGGGAGTATTGGAGGCTAAGAAGGAGCAATTGAGTTCACATGAGTTTGAGACAATTATCAGGGGTCTTACAGCTGGTGGATTTTTTCAGGATGCTGAGAGGATGAGGAAAGTGATGGAGGCTCAGGGTTTTCTGTCAGACAAACTTATGATGAACGTAATGGGTAAAAGTTTATTCTCAAAGAGGCCATTGATGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009553 GO:0009559 GO:0009561 GO:0009987 GO:0010197 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0030154 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

704

Amino Acids

79.46

Weight (kDa)

5.49

Isoelectric Point (pI)

40.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	354 - 454	6.9e-09	Fungal tetratrico peptide repeats
PPR_2	PF13041	373 - 417	1e-10	PPR repeat family
PPR	PF01535	373 - 401	1.9e-06	PPR repeat
PPR_3	PF13812	391 - 452	8.8e-08	Pentatricopeptide repeat domain
TPR_24	PF23276	417 - 529	5.8e-06	Fungal tetratrico peptide repeats
PPR_long	PF17177	421 - 529	1.9e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	550 - 591	2e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19520 AT1G19520
fragaria_vesca	FvH4_6g24430
malus_domestica	MD03G1139500.v1.1 MD11G1162300.v1.1
prunus_persica	Prupe.6G124500_v2.0.a1
pyrus_communis	pycom03g09450 pycom11g13170
rosa_chinensis	RchiOBHm_Chr7g0207751
rosa_laevigata	RLG00000003290
rosa_multiflora	Rmu_sc0005968.1_g000001 Rmu_sc0007645.1_g000012
rosa_roxburghii	Rroxscaffold_3G00251180
rosa_rugosa	Rorug07G0099500 Rorug07G0099600
rosa_samantha	Rh7AG232700 Rh7BG228000 Rh7CG246500 Rh7DG238800
rosa_wichuraiana	Rw7G019920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	245
Acc36I	ACCTGC	2 cut(s)	1244, 1502
AccB7I	CCANNNNNTGG	1 cut(s)	902
AccBSI	CCGCTC	2 cut(s)	384, 1481
AccII	CGCG	1 cut(s)	621
AciI	CCGC	8 cut(s)	48, 72, 126, 283, 384, 416, 728, 1481
AclWI	GGATC	4 cut(s)	184, 197, 818, 1022
AcoI	YGGCCR	1 cut(s)	403
AcsI	RAATTY	4 cut(s)	930, 1173, 1428, 1675
AcuI	CTGAAG	1 cut(s)	415
AcyI	GRCGYC	1 cut(s)	419
AfaI	GTAC	5 cut(s)	14, 68, 797, 1244, 1592
AfiI	CCNNNNNNNGG	4 cut(s)	412, 902, 1373, 1582
AflIII	ACRYGT	1 cut(s)	1239
AjnI	CCWGG	3 cut(s)	1098, 1299, 1732
AjuI	GAANNNNNNNTTGG	4 cut(s)	97, 129, 899, 931
AloI	GAACNNNNNNTCC	2 cut(s)	1476, 1508
Alw21I	GWGCWC	3 cut(s)	396, 603, 1643
Alw26I	GTCTC	4 cut(s)	317, 629, 815, 1955
Alw44I	GTGCAC	1 cut(s)	1639
AlwI	GGATC	4 cut(s)	184, 197, 818, 1022
AlwNI	CAGNNNCTG	1 cut(s)	1807
Ama87I	CYCGRG	2 cut(s)	307, 1049
AoxI	GGCC	4 cut(s)	300, 403, 878, 2096
ApaLI	GTGCAC	1 cut(s)	1639
ApeKI	GCWGC	7 cut(s)	74, 137, 715, 1658, 1705, 1708, 1780
ApoI	RAATTY	4 cut(s)	930, 1173, 1428, 1675
Asp700I	GAANNNNTTC	1 cut(s)	1094
AspA2I	CCTAGG	1 cut(s)	161
AspS9I	GGNCC	5 cut(s)	60, 165, 879, 887, 1234
AsuC2I	CCSGG	4 cut(s)	308, 309, 1050, 1051
AsuHPI	GGTGA	6 cut(s)	37, 475, 487, 578, 1583, 1841
AvaI	CYCGRG	2 cut(s)	307, 1049
AvaII	GGWCC	4 cut(s)	60, 165, 887, 1234
AvrII	CCTAGG	1 cut(s)	161
BaeGI	GKGCMC	1 cut(s)	1643
BalI	TGGCCA	1 cut(s)	405
BamHI	GGATCC	1 cut(s)	189
BanII	GRGCYC	2 cut(s)	603, 619
BarI	GAAGNNNNNNTAC	4 cut(s)	779, 811, 975, 1007
BbsI	GAAGAC	1 cut(s)	656
Bbv12I	GWGCWC	3 cut(s)	396, 603, 1643
BbvCI	CCTCAGC	2 cut(s)	723, 756
BbvI	GCAGC	7 cut(s)	61, 124, 727, 1670, 1692, 1720, 1792
BccI	CCATC	7 cut(s)	326, 337, 367, 472, 622, 1715, 2020
BcgI	CGANNNNNNTGC	2 cut(s)	1121, 1155
BciT130I	CCWGG	3 cut(s)	1100, 1301, 1734
BciVI	GTATCC	1 cut(s)	587
BclI	TGATCA	2 cut(s)	1338, 1579
BcnI	CCSGG	4 cut(s)	308, 309, 1050, 1051
BcoDI	GTCTC	4 cut(s)	317, 629, 815, 1955
BfaI	CTAG	7 cut(s)	51, 162, 1157, 1208, 1694, 1784, 1878
BfmI	CTRYAG	1 cut(s)	1706
BfuAI	ACCTGC	2 cut(s)	1244, 1502
BfuI	GTATCC	1 cut(s)	587
BlnI	CCTAGG	1 cut(s)	161
BlpI	GCTNAGC	1 cut(s)	1821
Bme1390I	CCNGG	7 cut(s)	308, 309, 1050, 1051, 1100, 1301, 1734
Bme18I	GGWCC	4 cut(s)	60, 165, 887, 1234
BmeT110I	CYCGRG	2 cut(s)	307, 1049
BmgT120I	GGNCC	5 cut(s)	60, 165, 879, 887, 1234
BmiI	GGNNCC	6 cut(s)	62, 167, 191, 888, 1298, 1836
BmrFI	CCNGG	7 cut(s)	308, 309, 1050, 1051, 1100, 1301, 1734
BmrI	ACTGGG	1 cut(s)	58
BmsI	GCATC	4 cut(s)	327, 1123, 1153, 1993
BmuI	ACTGGG	1 cut(s)	58
BpiI	GAAGAC	1 cut(s)	656
BplI	GAGNNNNNCTC	2 cut(s)	749, 781
BpmI	CTGGAG	3 cut(s)	1755, 1824, 1905
Bpu10I	CCTNAGC	5 cut(s)	56, 602, 723, 756, 2034
Bpu1102I	GCTNAGC	1 cut(s)	1821
BpuEI	CTTGAG	2 cut(s)	186, 1304
BpuMI	CCSGG	4 cut(s)	308, 309, 1050, 1051
Bsa29I	ATCGAT	1 cut(s)	1131
BsaHI	GRCGYC	1 cut(s)	419
BsaI	GGTCTC	1 cut(s)	815
BsaJI	CCNNGG	9 cut(s)	161, 216, 307, 534, 580, 882, 1048, 1049, 1300
BsaXI	ACNNNNNCTCC	6 cut(s)	626, 656, 696, 726, 1370, 1400
Bsc4I	CCNNNNNNNGG	4 cut(s)	412, 902, 1373, 1582
Bse1I	ACTGG	3 cut(s)	64, 1812, 1841
Bse3DI	GCAATG	1 cut(s)	1439
BseBI	CCWGG	3 cut(s)	1100, 1301, 1734
BseCI	ATCGAT	1 cut(s)	1131
BseDI	CCNNGG	9 cut(s)	161, 216, 307, 534, 580, 882, 1048, 1049, 1300
BseGI	GGATG	7 cut(s)	342, 487, 1090, 1107, 1726, 2008, 2019
BseLI	CCNNNNNNNGG	4 cut(s)	412, 902, 1373, 1582
BseMI	GCAATG	1 cut(s)	1439
BseNI	ACTGG	3 cut(s)	64, 1812, 1841
BseRI	GAGGAG	7 cut(s)	242, 383, 647, 717, 1309, 1491, 1827
BseSI	GKGCMC	1 cut(s)	1643
BseXI	GCAGC	7 cut(s)	61, 124, 727, 1670, 1692, 1720, 1792
BseYI	CCCAGC	2 cut(s)	1768, 1825
BsgI	GTGCAG	2 cut(s)	512, 734
Bsh1236I	CGCG	1 cut(s)	621
BshFI	GGCC	4 cut(s)	302, 405, 880, 2098
BshVI	ATCGAT	1 cut(s)	1131
BsiHKAI	GWGCWC	3 cut(s)	396, 603, 1643
BsiHKCI	CYCGRG	2 cut(s)	307, 1049
BsiSI	CCGG	2 cut(s)	308, 1050
BslFI	GGGAC	4 cut(s)	46, 151, 247, 900
BslI	CCNNNNNNNGG	4 cut(s)	412, 902, 1373, 1582
BsmAI	GTCTC	4 cut(s)	317, 629, 815, 1955
BsmFI	GGGAC	4 cut(s)	46, 151, 247, 900
BsmI	GAATGC	1 cut(s)	757
BsnI	GGCC	4 cut(s)	302, 405, 880, 2098
Bso31I	GGTCTC	1 cut(s)	815
BsoBI	CYCGRG	2 cut(s)	307, 1049
Bsp1286I	GDGCHC	4 cut(s)	396, 603, 619, 1643
Bsp143I	GATC	9 cut(s)	189, 814, 823, 955, 1014, 1338, 1448, 1579, 1653
Bsp1720I	GCTNAGC	1 cut(s)	1821
Bsp68I	TCGCGA	1 cut(s)	621
BspACI	CCGC	8 cut(s)	48, 72, 126, 283, 384, 416, 728, 1481
BspANI	GGCC	4 cut(s)	302, 405, 880, 2098
BspDI	ATCGAT	1 cut(s)	1131
BspFNI	CGCG	1 cut(s)	621
BspLI	GGNNCC	6 cut(s)	62, 167, 191, 888, 1298, 1836
BspMAI	CTGCAG	1 cut(s)	1710
BspMI	ACCTGC	2 cut(s)	1244, 1502
BspPI	GGATC	4 cut(s)	184, 197, 818, 1022
BspTNI	GGTCTC	1 cut(s)	815
BsrBI	CCGCTC	2 cut(s)	384, 1481
BsrDI	GCAATG	1 cut(s)	1439
BsrI	ACTGG	3 cut(s)	64, 1812, 1841
BssECI	CCNNGG	9 cut(s)	161, 216, 307, 534, 580, 882, 1048, 1049, 1300
BssMI	GATC	9 cut(s)	189, 814, 823, 955, 1014, 1338, 1448, 1579, 1653
BssNI	GRCGYC	1 cut(s)	419
BssT1I	CCWWGG	2 cut(s)	161, 882
Bst2UI	CCWGG	3 cut(s)	1100, 1301, 1734
Bst4CI	ACNGT	3 cut(s)	328, 454, 1753
Bst6I	CTCTTC	1 cut(s)	774
BstACI	GRCGYC	1 cut(s)	419
BstAPI	GCANNNNNTGC	2 cut(s)	134, 1664
BstC8I	GCNNGC	6 cut(s)	414, 531, 619, 720, 1278, 1648
BstDSI	CCRYGG	1 cut(s)	216
BstEII	GGTNACC	1 cut(s)	1571
BstF5I	GGATG	7 cut(s)	342, 487, 1090, 1107, 1726, 2008, 2019
BstFNI	CGCG	1 cut(s)	621
BstKTI	GATC	9 cut(s)	192, 817, 826, 958, 1017, 1341, 1451, 1582, 1656
BstMAI	GTCTC	4 cut(s)	317, 629, 815, 1955
BstMBI	GATC	9 cut(s)	189, 814, 823, 955, 1014, 1338, 1448, 1579, 1653
BstMWI	GCNNNNNNNGC	8 cut(s)	134, 289, 598, 761, 1277, 1647, 1664, 1907
BstNI	CCWGG	3 cut(s)	1100, 1301, 1734
BstNSI	RCATGY	2 cut(s)	490, 1243
BstPI	GGTNACC	1 cut(s)	1571
BstSCI	CCNGG	7 cut(s)	306, 307, 1048, 1049, 1098, 1299, 1732
BstSFI	CTRYAG	1 cut(s)	1706
BstSLI	GKGCMC	1 cut(s)	1643
BstUI	CGCG	1 cut(s)	621
BstV1I	GCAGC	7 cut(s)	61, 124, 727, 1670, 1692, 1720, 1792
BstV2I	GAAGAC	1 cut(s)	656
BstX2I	RGATCY	1 cut(s)	189
BstXI	CCANNNNNNTGG	1 cut(s)	1231
BstYI	RGATCY	1 cut(s)	189
Bsu15I	ATCGAT	1 cut(s)	1131
BsuI	GTATCC	1 cut(s)	587
BsuRI	GGCC	4 cut(s)	302, 405, 880, 2098
BsuTUI	ATCGAT	1 cut(s)	1131
BtgI	CCRYGG	1 cut(s)	216
BtsCI	GGATG	7 cut(s)	342, 487, 1090, 1107, 1726, 2008, 2019
BtsI	GCAGTG	1 cut(s)	1641
BtsIMutI	CAGTG	3 cut(s)	439, 1548, 1641
BtuMI	TCGCGA	1 cut(s)	621
BveI	ACCTGC	2 cut(s)	1244, 1502
Cac8I	GCNNGC	6 cut(s)	414, 531, 619, 720, 1278, 1648
CaiI	CAGNNNCTG	1 cut(s)	1807
Cfr13I	GGNCC	5 cut(s)	60, 165, 879, 887, 1234
Cfr9I	CCCGGG	2 cut(s)	307, 1049
ClaI	ATCGAT	1 cut(s)	1131
CseI	GACGC	2 cut(s)	408, 650
Csp6I	GTAC	5 cut(s)	13, 67, 796, 1243, 1591
CspCI	CAANNNNNGTGG	2 cut(s)	763, 798
CviAII	CATG	9 cut(s)	134, 487, 857, 1240, 1336, 1435, 1651, 1853, 1952
CviQI	GTAC	5 cut(s)	13, 67, 796, 1243, 1591
DpnI	GATC	9 cut(s)	191, 816, 825, 957, 1016, 1340, 1450, 1581, 1655
DpnII	GATC	9 cut(s)	189, 814, 823, 955, 1014, 1338, 1448, 1579, 1653
DraI	TTTAAA	2 cut(s)	145, 1179
DrdI	GACNNNNNNGTC	1 cut(s)	245
DseDI	GACNNNNNNGTC	1 cut(s)	245
EaeI	YGGCCR	1 cut(s)	403
Eam1104I	CTCTTC	1 cut(s)	774
EarI	CTCTTC	1 cut(s)	774
EciI	GGCGGA	1 cut(s)	743
Ecl136II	GAGCTC	1 cut(s)	601
Eco130I	CCWWGG	2 cut(s)	161, 882
Eco24I	GRGCYC	2 cut(s)	603, 619
Eco31I	GGTCTC	1 cut(s)	815
Eco47I	GGWCC	4 cut(s)	60, 165, 887, 1234
Eco53kI	GAGCTC	1 cut(s)	601
Eco57I	CTGAAG	1 cut(s)	415
Eco88I	CYCGRG	2 cut(s)	307, 1049
Eco91I	GGTNACC	1 cut(s)	1571
EcoICRI	GAGCTC	1 cut(s)	601
EcoO109I	RGGNCCY	2 cut(s)	60, 165
EcoO65I	GGTNACC	1 cut(s)	1571
EcoRII	CCWGG	3 cut(s)	1098, 1299, 1732
EcoT14I	CCWWGG	2 cut(s)	161, 882
EcoT38I	GRGCYC	2 cut(s)	603, 619
ErhI	CCWWGG	2 cut(s)	161, 882
FaeI	CATG	9 cut(s)	137, 490, 860, 1243, 1339, 1438, 1654, 1856, 1955
FalI	AAGNNNNNCTT	2 cut(s)	1709, 1741
FaqI	GGGAC	4 cut(s)	46, 151, 247, 900
FatI	CATG	9 cut(s)	133, 486, 856, 1239, 1335, 1434, 1650, 1852, 1951
FauI	CCCGC	1 cut(s)	377
FauNDI	CATATG	3 cut(s)	875, 1348, 1558
FbaI	TGATCA	2 cut(s)	1338, 1579
FokI	GGATG	7 cut(s)	349, 494, 1094, 1097, 1733, 2015, 2026
FriOI	GRGCYC	2 cut(s)	603, 619
FspBI	CTAG	7 cut(s)	51, 162, 1157, 1208, 1694, 1784, 1878
GsaI	CCCAGC	2 cut(s)	1772, 1829
GsuI	CTGGAG	3 cut(s)	1755, 1824, 1905
HaeIII	GGCC	4 cut(s)	302, 405, 880, 2098
HapII	CCGG	2 cut(s)	308, 1050
HgaI	GACGC	2 cut(s)	408, 650
Hin1I	GRCGYC	1 cut(s)	419
Hin1II	CATG	9 cut(s)	137, 490, 860, 1243, 1339, 1438, 1654, 1856, 1955
HincII	GTYRAC	1 cut(s)	250
HindII	GTYRAC	1 cut(s)	250
HindIII	AAGCTT	2 cut(s)	398, 1908
HinfI	GANTC	6 cut(s)	212, 221, 1211, 1286, 1331, 1532
HpaII	CCGG	2 cut(s)	308, 1050
HphI	GGTGA	6 cut(s)	37, 475, 487, 578, 1583, 1841
Hpy166II	GTNNAC	7 cut(s)	250, 447, 965, 1237, 1327, 1641, 1949
Hpy188I	TCNGA	5 cut(s)	226, 424, 581, 823, 2050
Hpy188III	TCNNGA	6 cut(s)	620, 668, 812, 1025, 1262, 2000
Hpy8I	GTNNAC	7 cut(s)	250, 447, 965, 1237, 1327, 1641, 1949
Hpy99I	CGWCG	1 cut(s)	424
HpyAV	CCTTC	5 cut(s)	187, 499, 511, 1315, 1927
HpyCH4III	ACNGT	3 cut(s)	328, 454, 1753
HpyCH4IV	ACGT	2 cut(s)	1267, 2067
HpyF10VI	GCNNNNNNNGC	8 cut(s)	134, 289, 598, 761, 1277, 1647, 1664, 1907
HpySE526I	ACGT	2 cut(s)	1267, 2067
Hsp92I	GRCGYC	1 cut(s)	419
Hsp92II	CATG	9 cut(s)	137, 490, 860, 1243, 1339, 1438, 1654, 1856, 1955
Ksp22I	TGATCA	2 cut(s)	1338, 1579
Kzo9I	GATC	9 cut(s)	189, 814, 823, 955, 1014, 1338, 1448, 1579, 1653
LmnI	GCTCC	6 cut(s)	381, 658, 1296, 1478, 1840, 1936
Lsp1109I	GCAGC	7 cut(s)	61, 124, 727, 1670, 1692, 1720, 1792
LweI	GCATC	4 cut(s)	327, 1123, 1153, 1993
MaeI	CTAG	7 cut(s)	51, 162, 1157, 1208, 1694, 1784, 1878
MaeII	ACGT	2 cut(s)	1267, 2067
MaeIII	GTNAC	3 cut(s)	919, 1112, 1571
MalI	GATC	9 cut(s)	191, 816, 825, 957, 1016, 1340, 1450, 1581, 1655
MbiI	CCGCTC	2 cut(s)	384, 1481
MboI	GATC	9 cut(s)	189, 814, 823, 955, 1014, 1338, 1448, 1579, 1653
MfeI	CAATTG	1 cut(s)	1940
MflI	RGATCY	1 cut(s)	189
MhlI	GDGCHC	4 cut(s)	396, 603, 619, 1643
MlsI	TGGCCA	1 cut(s)	405
MluNI	TGGCCA	1 cut(s)	405
MlyI	GAGTC	1 cut(s)	1295
MmeI	TCCRAC	2 cut(s)	402, 1333
Mox20I	TGGCCA	1 cut(s)	405
MroXI	GAANNNNTTC	1 cut(s)	1094
MscI	TGGCCA	1 cut(s)	405
MseI	TTAA	3 cut(s)	144, 1062, 1178
MslI	CAYNNNNRTG	2 cut(s)	1064, 1469
Msp20I	TGGCCA	1 cut(s)	405
MspA1I	CMGCKG	3 cut(s)	74, 1825, 1985
MspI	CCGG	2 cut(s)	308, 1050
MspR9I	CCNGG	7 cut(s)	308, 309, 1050, 1051, 1100, 1301, 1734
MunI	CAATTG	1 cut(s)	1940
Mva1269I	GAATGC	1 cut(s)	757
MvaI	CCWGG	3 cut(s)	1100, 1301, 1734
MvnI	CGCG	1 cut(s)	621
MwoI	GCNNNNNNNGC	8 cut(s)	134, 289, 598, 761, 1277, 1647, 1664, 1907
NciI	CCSGG	4 cut(s)	308, 309, 1050, 1051
NdeI	CATATG	3 cut(s)	875, 1348, 1558
NdeII	GATC	9 cut(s)	189, 814, 823, 955, 1014, 1338, 1448, 1579, 1653
NlaIII	CATG	9 cut(s)	137, 490, 860, 1243, 1339, 1438, 1654, 1856, 1955
NlaIV	GGNNCC	6 cut(s)	62, 167, 191, 888, 1298, 1836
NmeAIII	GCCGAG	1 cut(s)	559
NmuCI	GTSAC	2 cut(s)	1112, 1571
NruI	TCGCGA	1 cut(s)	621
NspI	RCATGY	2 cut(s)	490, 1243
PciI	ACATGT	1 cut(s)	1239
PctI	GAATGC	1 cut(s)	757
PdmI	GAANNNNTTC	1 cut(s)	1094
PfeI	GAWTC	5 cut(s)	212, 221, 1211, 1331, 1532
PflMI	CCANNNNNTGG	1 cut(s)	902
PleI	GAGTC	1 cut(s)	1294
PpsI	GAGTC	1 cut(s)	1294
PpuMI	RGGWCCY	2 cut(s)	60, 165
PscI	ACATGT	1 cut(s)	1239
Psp124BI	GAGCTC	1 cut(s)	603
Psp5II	RGGWCCY	2 cut(s)	60, 165
Psp6I	CCWGG	3 cut(s)	1098, 1299, 1732
PspEI	GGTNACC	1 cut(s)	1571
PspFI	CCCAGC	2 cut(s)	1768, 1825
PspGI	CCWGG	3 cut(s)	1098, 1299, 1732
PspN4I	GGNNCC	6 cut(s)	62, 167, 191, 888, 1298, 1836
PspPI	GGNCC	5 cut(s)	60, 165, 879, 887, 1234
PspPPI	RGGWCCY	2 cut(s)	60, 165
PstI	CTGCAG	1 cut(s)	1710
PstNI	CAGNNNCTG	1 cut(s)	1807
PsuI	RGATCY	1 cut(s)	189
PvuII	CAGCTG	2 cut(s)	1825, 1985
RruI	TCGCGA	1 cut(s)	621
RsaI	GTAC	5 cut(s)	14, 68, 797, 1244, 1592
RsaNI	GTAC	5 cut(s)	13, 67, 796, 1243, 1591
RseI	CAYNNNNRTG	2 cut(s)	1064, 1469
SacI	GAGCTC	1 cut(s)	603
SaqAI	TTAA	3 cut(s)	144, 1062, 1178
Sau3AI	GATC	9 cut(s)	189, 814, 823, 955, 1014, 1338, 1448, 1579, 1653
Sau96I	GGNCC	5 cut(s)	60, 165, 879, 887, 1234
SchI	GAGTC	1 cut(s)	1295
ScrFI	CCNGG	7 cut(s)	308, 309, 1050, 1051, 1100, 1301, 1734
SduI	GDGCHC	4 cut(s)	396, 603, 619, 1643
SfaNI	GCATC	4 cut(s)	327, 1123, 1153, 1993
SfcI	CTRYAG	1 cut(s)	1706
SinI	GGWCC	4 cut(s)	60, 165, 887, 1234
SmaI	CCCGGG	2 cut(s)	309, 1051
SmiMI	CAYNNNNRTG	2 cut(s)	1064, 1469
SmlI	CTYRAG	2 cut(s)	201, 1283
SmoI	CTYRAG	2 cut(s)	201, 1283
SsiI	CCGC	8 cut(s)	48, 72, 126, 283, 384, 416, 728, 1481
SspMI	CTAG	7 cut(s)	51, 162, 1157, 1208, 1694, 1784, 1878
SstI	GAGCTC	1 cut(s)	603
StyD4I	CCNGG	7 cut(s)	306, 307, 1048, 1049, 1098, 1299, 1732
StyI	CCWWGG	2 cut(s)	161, 882
TaaI	ACNGT	3 cut(s)	328, 454, 1753
TaiI	ACGT	2 cut(s)	1270, 2070
TaqI	TCGA	5 cut(s)	667, 813, 1131, 1447, 1683
TaqII	GACCGA	1 cut(s)	904
TatI	WGTACW	1 cut(s)	1242
TauI	GCSGC	3 cut(s)	74, 286, 419
TfiI	GAWTC	5 cut(s)	212, 221, 1211, 1331, 1532
Tru1I	TTAA	3 cut(s)	144, 1062, 1178
Tru9I	TTAA	3 cut(s)	144, 1062, 1178
TscAI	CASTG	3 cut(s)	439, 1548, 1648
TseFI	GTSAC	2 cut(s)	1112, 1571
TseI	GCWGC	7 cut(s)	74, 137, 715, 1658, 1705, 1708, 1780
Tsp45I	GTSAC	2 cut(s)	1112, 1571
TspDTI	ATGAA	4 cut(s)	530, 1334, 1841, 2078
TspGWI	ACGGA	3 cut(s)	205, 255, 1100
TspMI	CCCGGG	2 cut(s)	307, 1049
TspRI	CASTG	3 cut(s)	439, 1548, 1648
Van91I	CCANNNNNTGG	1 cut(s)	902
VneI	GTGCAC	1 cut(s)	1639
VpaK11BI	GGWCC	4 cut(s)	60, 165, 887, 1234
XapI	RAATTY	4 cut(s)	930, 1173, 1428, 1675
XceI	RCATGY	2 cut(s)	490, 1243
XmaI	CCCGGG	2 cut(s)	307, 1049
XmaJI	CCTAGG	1 cut(s)	161
XmnI	GAANNNNTTC	1 cut(s)	1094
XspI	CTAG	7 cut(s)	51, 162, 1157, 1208, 1694, 1784, 1878

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.