Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0011367

Physical Location & Seq

Genomic Coordinates Reverse (-)

19775588 .. 19779087

Gene Structure 3500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG228000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGAGTCTGAGGTACTTAGTTTCCAGGCAATCAGTGTCAAAAATCACTGCTAGGCTTCGGTCTCAGTATGCCGCTGCGTATGGTTTCGCAACCGTTGCAGACCCAATACCCAGTTCATTTCGTTCTGCAACTCATCATGGTGGGTCTAAACCTCTCAAAAACCCTAGGTACCCAATACCCATGAGTTCGTTTAGTAGAGGCATTCACTCCGCTCAAGTGGTTGATTCGGTGGATTCCGAGGAGGAGGAGGAGGAGGAAGATGGAGGCATTAATGAGTTCTTGTCCCGATTCGTGTGGATTATACGGCAGAAGCTCAATGTGGCCTACCCCGGTTGCGATAAGGAAACTGTGGATGGGATGCTGATGGTTATTGTGCAGAGGGTTGTGGAGGAGATGGAGCAGGGCGGGTTTGAGCAGATGCTTGGCGAGAGGCAGGGTGCTGCTCCGTCGCAGGATTTTAGTGAGGATTTGTGGAGAACGGTGTGGGAGGTGAGCAATATGGTTTTGGATGACATGAGGAAGGAAGCGAGGAAGGAGAAAATGAAGGGGTTTCTGCATGCTGAGGAAGTCAAGGAGATGTGTAGGTTTGCTGGTGAAGTTGGTATCCGGGGGGATATGCTTAGAGAGCTCAGGTTCAAGTGGGCTCGCGAGAAGATGGAGGAGACTGAGTTTTATGAGAGCTTGGAGCTTCTTAGAGAACAAGAGAAAGCCCAAGAGAAAGGGGAGGAGGAAGGAGGGGTTGTGCAAGCTGATGAGGAGGCTGGTGTAACTGAGGTGAATCCTAAGGTTGGTTCTCTTCCCAAGAGGCGAGGGAAGATAAGGTACAAAATTTATGGTCTTGATCTCTCTGATCCGAAGTGGGTTGAAGTTGTTGATAGAATCCATGAGGCAGGGGAGGTCATTTGTCCCCAGGAACCGAAACCAATATCTGGGAAATGCAAGTTGGTTACAGAGAAAATTCTTCAATCAAATGAGGCAGATGACATGTCTCCACTTTTGGCTGAATGGGTAGAGTTGCTCCAACCTAGTAGGATTGATTGGGACAATTTGCTTGATCAATTGAAAGAGCAGAACACCAGGTTATACTTTAAGGTGGCAGAACTTGTATTGGATGAGAAATCTTTCCAGACGAACATCCGTGACTACTCCATGCTTATCGATGCTTATGCCAAGGAAAATAACATAGAAGATGCTGAGAGAATTTTAAAGAAGATGAATGAAAATGGGTTTGAACCTGATATCTTAACAACCACTATTTTGGTTCACATGTACAGCAAGGCAGGCAATCTTGAAGGTGCCGACCAAGCATTTAAGACATTGAAGAGCCAGGGCTTCCGACCAGATATGAAGGTCTACAATTCCATGATCAAGGCATATGTAAATGCTAACCAACCGAAATTGGGGGAGTCATTGATGAGAGAGATGGAATCAAGAGACATCAAACCCACAAAAGAAATTTACATGGCATTGCTTCAATCATTTGCCCAACTTGGTGATGTGAAGGGAGCGGAACGAATTGTCAACACTATGATTATGGCAGGTTTTCAGCCAACTTTAGAATCTTGTTCAGTGCTTGTTGAGGCATATGGAAAAGCTGGTGACCCTGATCAGGCAAGGCACAACTTTGATTACATAATAAAAGTTGGGCACAAACCTGACGACAAGTGCACTGCAAGCATGATTGCAGCTTATGAAAAGAAAAATTTACTCGATAAGGCACTGGATTTGTTGTTGCAGCTTGAAAAGGATGGCTTTGAGCCGGGAGTTGCTACTTACACAGTTCTTGTAGATTGGCTGGGAAAACTGCAGCTAGTTAGTGAGGCTGAACAGCTATTGGACAAAATTGCTGAGCTGGGTGAGGCTCCTCCATTGCAACTTCATGTAAGCATTTGCGATATGTATGCTAGGGCTGGATTTGAGAAAAAGGCACTACAAGCTTTGGGAGTTTTGGAGGCTAAGAAGGAGCAACTGAGTTTAGATGACTTTGAGACAATTATTGAGGGGCTTATGACTGGTGGATTTTTTCAGGATGCTCAGAGGATACGGGGAGTGATGGAGGCTCAGGGTTTTGTTGCGTCACAGCAACTTCAGTTGCACCTAGTGGCTAAAGGTTTTACCCTCAAGAGGCCATCAATGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009553 GO:0009559 GO:0009561 GO:0009987 GO:0010197 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0030154 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

713

Amino Acids

80.7

Weight (kDa)

5.1

Isoelectric Point (pI)

42.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	369 - 464	3.4e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	371 - 416	5.2e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	382 - 426	1.1e-09	PPR repeat family
PPR_long	PF17177	388 - 525	3.9e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	400 - 461	9.3e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	447 - 483	6.1e-06	PPR repeat family
PPR_3	PF13812	470 - 531	1.3e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	559 - 600	7.5e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19520 AT1G19520
fragaria_vesca	FvH4_6g24430
malus_domestica	MD03G1139500.v1.1 MD11G1162300.v1.1
prunus_persica	Prupe.6G124500_v2.0.a1
pyrus_communis	pycom03g09450 pycom11g13170
rosa_chinensis	RchiOBHm_Chr7g0207751
rosa_laevigata	RLG00000003290
rosa_multiflora	Rmu_sc0005968.1_g000001 Rmu_sc0007645.1_g000012
rosa_roxburghii	Rroxscaffold_3G00251180
rosa_rugosa	Rorug07G0099500 Rorug07G0099600
rosa_samantha	Rh7AG232700 Rh7BG228000 Rh7CG246500 Rh7DG238800
rosa_wichuraiana	Rw7G019920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1529
Acc65I	GGTACC	1 cut(s)	168
AccB1I	GGYRCC	2 cut(s)	168, 1295
AccB7I	CCANNNNNTGG	1 cut(s)	929
AccBSI	CCGCTC	2 cut(s)	212, 1508
AccI	GTMKAC	1 cut(s)	1353
AccII	CGCG	1 cut(s)	648
AciI	CCGC	4 cut(s)	72, 210, 405, 1508
AclWI	GGATC	1 cut(s)	845
AcsI	RAATTY	5 cut(s)	828, 957, 1200, 1455, 1702
AcuI	CTGAAG	1 cut(s)	2072
AdeI	CACNNNGTG	1 cut(s)	2101
AfaI	GTAC	4 cut(s)	14, 170, 824, 1271
AfiI	CCNNNNNNNGG	5 cut(s)	788, 929, 1400, 1609, 2124
AflIII	ACRYGT	2 cut(s)	984, 1266
AgsI	TTSAA	9 cut(s)	637, 866, 965, 1063, 1232, 1292, 1321, 1475, 1742
AjnI	CCWGG	4 cut(s)	23, 909, 1076, 1326
AjuI	GAANNNNNNNTTGG	4 cut(s)	97, 129, 926, 958
Alw21I	GWGCWC	2 cut(s)	630, 1670
Alw26I	GTCTC	5 cut(s)	66, 656, 993, 1428, 1982
Alw44I	GTGCAC	1 cut(s)	1666
AlwI	GGATC	1 cut(s)	845
AoxI	GGCC	2 cut(s)	321, 2126
ApaLI	GTGCAC	1 cut(s)	1666
ApeKI	GCWGC	5 cut(s)	74, 440, 1685, 1735, 1807
ApoI	RAATTY	5 cut(s)	828, 957, 1200, 1455, 1702
AseI	ATTAAT	1 cut(s)	270
Asp700I	GAANNNNTTC	1 cut(s)	1121
Asp718I	GGTACC	1 cut(s)	168
AspA2I	CCTAGG	1 cut(s)	164
AsuC2I	CCSGG	3 cut(s)	330, 608, 1761
AsuHPI	GGTGA	6 cut(s)	502, 605, 787, 1505, 1610, 1868
AvrII	CCTAGG	1 cut(s)	164
AxyI	CCTNAGG	1 cut(s)	783
BaeGI	GKGCMC	2 cut(s)	1650, 1670
BanI	GGYRCC	2 cut(s)	168, 1295
BanII	GRGCYC	2 cut(s)	630, 646
BarI	GAAGNNNNNNTAC	2 cut(s)	806, 838
Bbv12I	GWGCWC	2 cut(s)	630, 1670
BbvCI	CCTCAGC	1 cut(s)	561
BbvI	GCAGC	5 cut(s)	61, 427, 1697, 1747, 1819
BccI	CCATC	9 cut(s)	254, 347, 358, 388, 649, 1417, 1742, 2047, 2137
BceAI	ACGGC	1 cut(s)	320
BcgI	CGANNNNNNTGC	4 cut(s)	1148, 1182, 1883, 1917
BciT130I	CCWGG	4 cut(s)	25, 911, 1078, 1328
BciVI	GTATCC	2 cut(s)	614, 2034
BclI	TGATCA	3 cut(s)	1054, 1365, 1606
BcnI	CCSGG	3 cut(s)	330, 608, 1761
BcoDI	GTCTC	5 cut(s)	66, 656, 993, 1428, 1982
BfaI	CTAG	6 cut(s)	51, 165, 1026, 1811, 1905, 2099
BfmI	CTRYAG	1 cut(s)	1805
BfuAI	ACCTGC	1 cut(s)	1529
BfuI	GTATCC	2 cut(s)	614, 2034
BisI	GCNGC	6 cut(s)	72, 75, 441, 1686, 1736, 1808
BlnI	CCTAGG	1 cut(s)	164
BlpI	GCTNAGC	1 cut(s)	1848
BlsI	GCNGC	6 cut(s)	73, 76, 442, 1687, 1737, 1809
Bme1390I	CCNGG	7 cut(s)	25, 330, 608, 911, 1078, 1328, 1761
BmiI	GGNNCC	4 cut(s)	170, 915, 1297, 1863
BmrFI	CCNGG	7 cut(s)	25, 330, 608, 911, 1078, 1328, 1761
BmrI	ACTGGG	1 cut(s)	105
BmsI	GCATC	5 cut(s)	348, 408, 1150, 1180, 2020
BmuI	ACTGGG	1 cut(s)	105
Bpu10I	CCTNAGC	3 cut(s)	561, 629, 2061
Bpu1102I	GCTNAGC	1 cut(s)	1848
BpuEI	CTTGAG	2 cut(s)	198, 2105
BpuMI	CCSGG	3 cut(s)	330, 608, 1761
Bsa29I	ATCGAT	1 cut(s)	1158
BsaI	GGTCTC	1 cut(s)	66
BsaJI	CCNNGG	7 cut(s)	164, 237, 328, 607, 909, 1170, 1327
BsaXI	ACNNNNNCTCC	4 cut(s)	653, 683, 726, 756
Bsc4I	CCNNNNNNNGG	5 cut(s)	788, 929, 1400, 1609, 2124
Bse1I	ACTGG	3 cut(s)	111, 1725, 2017
Bse21I	CCTNAGG	1 cut(s)	783
Bse3DI	GCAATG	2 cut(s)	1466, 1868
BseBI	CCWGG	4 cut(s)	25, 911, 1078, 1328
BseCI	ATCGAT	1 cut(s)	1158
BseDI	CCNNGG	7 cut(s)	164, 237, 328, 607, 909, 1170, 1327
BseGI	GGATG	7 cut(s)	358, 363, 514, 1117, 1134, 1753, 2035
BseLI	CCNNNNNNNGG	5 cut(s)	788, 929, 1400, 1609, 2124
BseMI	GCAATG	2 cut(s)	1466, 1868
BseNI	ACTGG	3 cut(s)	111, 1725, 2017
BseSI	GKGCMC	2 cut(s)	1650, 1670
BseXI	GCAGC	5 cut(s)	61, 427, 1697, 1747, 1819
BseYI	CCCAGC	2 cut(s)	1795, 1852
BsgI	GTGCAG	1 cut(s)	395
Bsh1236I	CGCG	1 cut(s)	648
BshFI	GGCC	2 cut(s)	323, 2128
BshNI	GGYRCC	2 cut(s)	168, 1295
BshVI	ATCGAT	1 cut(s)	1158
BsiHKAI	GWGCWC	2 cut(s)	630, 1670
BsiSI	CCGG	3 cut(s)	330, 607, 1760
BslFI	GGGAC	3 cut(s)	268, 891, 1055
BslI	CCNNNNNNNGG	5 cut(s)	788, 929, 1400, 1609, 2124
BsmAI	GTCTC	5 cut(s)	66, 656, 993, 1428, 1982
BsmFI	GGGAC	3 cut(s)	268, 891, 1055
BsmI	GAATGC	1 cut(s)	201
BsnI	GGCC	2 cut(s)	323, 2128
Bso31I	GGTCTC	1 cut(s)	66
Bsp1286I	GDGCHC	4 cut(s)	630, 646, 1650, 1670
Bsp1407I	TGTACA	1 cut(s)	1269
Bsp143I	GATC	5 cut(s)	841, 850, 1054, 1365, 1606
Bsp1720I	GCTNAGC	1 cut(s)	1848
Bsp68I	TCGCGA	1 cut(s)	648
BspACI	CCGC	4 cut(s)	72, 210, 405, 1508
BspANI	GGCC	2 cut(s)	323, 2128
BspDI	ATCGAT	1 cut(s)	1158
BspFNI	CGCG	1 cut(s)	648
BspLI	GGNNCC	4 cut(s)	170, 915, 1297, 1863
BspMAI	CTGCAG	1 cut(s)	1809
BspMI	ACCTGC	1 cut(s)	1529
BspPI	GGATC	1 cut(s)	845
BspQI	GCTCTTC	1 cut(s)	1316
BspT107I	GGYRCC	2 cut(s)	168, 1295
BspTNI	GGTCTC	1 cut(s)	66
BsrBI	CCGCTC	2 cut(s)	212, 1508
BsrDI	GCAATG	2 cut(s)	1466, 1868
BsrGI	TGTACA	1 cut(s)	1269
BsrI	ACTGG	3 cut(s)	111, 1725, 2017
BssECI	CCNNGG	7 cut(s)	164, 237, 328, 607, 909, 1170, 1327
BssMI	GATC	5 cut(s)	841, 850, 1054, 1365, 1606
BssT1I	CCWWGG	2 cut(s)	164, 1170
Bst2UI	CCWGG	4 cut(s)	25, 911, 1078, 1328
Bst4CI	ACNGT	4 cut(s)	94, 349, 481, 1780
Bst6I	CTCTTC	2 cut(s)	801, 1316
BstAPI	GCANNNNNTGC	1 cut(s)	95
BstAUI	TGTACA	1 cut(s)	1269
BstC8I	GCNNGC	5 cut(s)	558, 646, 747, 1282, 1675
BstEII	GGTNACC	1 cut(s)	1598
BstF5I	GGATG	7 cut(s)	358, 363, 514, 1117, 1134, 1753, 2035
BstFNI	CGCG	1 cut(s)	648
BstKTI	GATC	5 cut(s)	844, 853, 1057, 1368, 1609
BstMAI	GTCTC	5 cut(s)	66, 656, 993, 1428, 1982
BstMBI	GATC	5 cut(s)	841, 850, 1054, 1365, 1606
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 625, 1281, 1304, 1674, 1934
BstNI	CCWGG	4 cut(s)	25, 911, 1078, 1328
BstNSI	RCATGY	3 cut(s)	560, 988, 1270
BstPI	GGTNACC	1 cut(s)	1598
BstSCI	CCNGG	7 cut(s)	23, 328, 606, 909, 1076, 1326, 1759
BstSFI	CTRYAG	1 cut(s)	1805
BstSLI	GKGCMC	2 cut(s)	1650, 1670
BstUI	CGCG	1 cut(s)	648
BstV1I	GCAGC	5 cut(s)	61, 427, 1697, 1747, 1819
BstXI	CCANNNNNNTGG	1 cut(s)	1258
Bsu15I	ATCGAT	1 cut(s)	1158
Bsu36I	CCTNAGG	1 cut(s)	783
BsuI	GTATCC	2 cut(s)	614, 2034
BsuRI	GGCC	2 cut(s)	323, 2128
BsuTUI	ATCGAT	1 cut(s)	1158
BtsCI	GGATG	7 cut(s)	358, 363, 514, 1117, 1134, 1753, 2035
BtsI	GCAGTG	2 cut(s)	45, 1668
BtsIMutI	CAGTG	5 cut(s)	39, 45, 1575, 1668, 1718
BtuMI	TCGCGA	1 cut(s)	648
BveI	ACCTGC	1 cut(s)	1529
Cac8I	GCNNGC	5 cut(s)	558, 646, 747, 1282, 1675
ClaI	ATCGAT	1 cut(s)	1158
CseI	GACGC	1 cut(s)	2064
CsiI	ACCWGGT	1 cut(s)	1076
Csp6I	GTAC	4 cut(s)	13, 169, 823, 1270
CviQI	GTAC	4 cut(s)	13, 169, 823, 1270
DpnI	GATC	5 cut(s)	843, 852, 1056, 1367, 1608
DpnII	GATC	5 cut(s)	841, 850, 1054, 1365, 1606
DraI	TTTAAA	1 cut(s)	1206
DraIII	CACNNNGTG	1 cut(s)	2101
Eam1104I	CTCTTC	2 cut(s)	801, 1316
EarI	CTCTTC	2 cut(s)	801, 1316
Ecl136II	GAGCTC	1 cut(s)	628
Eco130I	CCWWGG	2 cut(s)	164, 1170
Eco24I	GRGCYC	2 cut(s)	630, 646
Eco31I	GGTCTC	1 cut(s)	66
Eco32I	GATATC	1 cut(s)	1240
Eco53kI	GAGCTC	1 cut(s)	628
Eco57I	CTGAAG	1 cut(s)	2072
Eco81I	CCTNAGG	1 cut(s)	783
Eco91I	GGTNACC	1 cut(s)	1598
EcoICRI	GAGCTC	1 cut(s)	628
EcoO65I	GGTNACC	1 cut(s)	1598
EcoRII	CCWGG	4 cut(s)	23, 909, 1076, 1326
EcoRV	GATATC	1 cut(s)	1240
EcoT14I	CCWWGG	2 cut(s)	164, 1170
EcoT38I	GRGCYC	2 cut(s)	630, 646
ErhI	CCWWGG	2 cut(s)	164, 1170
FalI	AAGNNNNNCTT	2 cut(s)	1736, 1768
FaqI	GGGAC	3 cut(s)	268, 891, 1055
FauI	CCCGC	1 cut(s)	398
FauNDI	CATATG	2 cut(s)	1375, 1585
FbaI	TGATCA	3 cut(s)	1054, 1365, 1606
FblI	GTMKAC	1 cut(s)	1353
Fnu4HI	GCNGC	6 cut(s)	72, 75, 441, 1686, 1736, 1808
FokI	GGATG	7 cut(s)	365, 370, 521, 1121, 1124, 1760, 2042
FriOI	GRGCYC	2 cut(s)	630, 646
Fsp4HI	GCNGC	6 cut(s)	72, 75, 441, 1686, 1736, 1808
FspBI	CTAG	6 cut(s)	51, 165, 1026, 1811, 1905, 2099
GluI	GCNGC	6 cut(s)	72, 75, 441, 1686, 1736, 1808
GsaI	CCCAGC	2 cut(s)	1799, 1856
HaeIII	GGCC	2 cut(s)	323, 2128
HapII	CCGG	3 cut(s)	330, 607, 1760
HgaI	GACGC	1 cut(s)	2064
HincII	GTYRAC	1 cut(s)	1522
HindII	GTYRAC	1 cut(s)	1522
HindIII	AAGCTT	1 cut(s)	1935
HinfI	GANTC	9 cut(s)	4, 224, 233, 288, 778, 879, 1406, 1427, 1559
HpaII	CCGG	3 cut(s)	330, 607, 1760
HphI	GGTGA	6 cut(s)	502, 605, 787, 1505, 1610, 1868
Hpy166II	GTNNAC	4 cut(s)	1264, 1354, 1522, 1668
Hpy188I	TCNGA	6 cut(s)	9, 238, 850, 855, 1337, 2037
Hpy188III	TCNNGA	8 cut(s)	285, 647, 839, 1126, 1289, 1431, 2027, 2122
Hpy8I	GTNNAC	4 cut(s)	1264, 1354, 1522, 1668
Hpy99I	CGWCG	1 cut(s)	451
HpyAV	CCTTC	8 cut(s)	514, 526, 538, 725, 1286, 1342, 1495, 1954
HpyCH4III	ACNGT	4 cut(s)	94, 349, 481, 1780
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 625, 1281, 1304, 1674, 1934
KpnI	GGTACC	1 cut(s)	172
Ksp22I	TGATCA	3 cut(s)	1054, 1365, 1606
Kzo9I	GATC	5 cut(s)	841, 850, 1054, 1365, 1606
LguI	GCTCTTC	1 cut(s)	1316
LmnI	GCTCC	7 cut(s)	397, 448, 685, 1023, 1505, 1867, 1963
Lsp1109I	GCAGC	5 cut(s)	61, 427, 1697, 1747, 1819
LweI	GCATC	5 cut(s)	348, 408, 1150, 1180, 2020
MabI	ACCWGGT	1 cut(s)	1076
MaeI	CTAG	6 cut(s)	51, 165, 1026, 1811, 1905, 2099
MaeIII	GTNAC	5 cut(s)	766, 946, 1139, 1598, 2076
MalI	GATC	5 cut(s)	843, 852, 1056, 1367, 1608
MbiI	CCGCTC	2 cut(s)	212, 1508
MboI	GATC	5 cut(s)	841, 850, 1054, 1365, 1606
MboII	GAAGA	8 cut(s)	269, 664, 788, 826, 953, 1199, 1222, 1333
MfeI	CAATTG	1 cut(s)	1058
MhlI	GDGCHC	4 cut(s)	630, 646, 1650, 1670
MlyI	GAGTC	2 cut(s)	13, 1415
MmeI	TCCRAC	2 cut(s)	1045, 1360
MroXI	GAANNNNTTC	1 cut(s)	1121
MseI	TTAA	5 cut(s)	270, 1089, 1205, 1244, 1311
MslI	CAYNNNNRTG	1 cut(s)	138
MspA1I	CMGCKG	1 cut(s)	74
MspI	CCGG	3 cut(s)	330, 607, 1760
MspR9I	CCNGG	7 cut(s)	25, 330, 608, 911, 1078, 1328, 1761
MunI	CAATTG	1 cut(s)	1058
Mva1269I	GAATGC	1 cut(s)	201
MvaI	CCWGG	4 cut(s)	25, 911, 1078, 1328
MvnI	CGCG	1 cut(s)	648
MwoI	GCNNNNNNNGC	6 cut(s)	95, 625, 1281, 1304, 1674, 1934
NciI	CCSGG	3 cut(s)	330, 608, 1761
NdeI	CATATG	2 cut(s)	1375, 1585
NdeII	GATC	5 cut(s)	841, 850, 1054, 1365, 1606
NlaIV	GGNNCC	4 cut(s)	170, 915, 1297, 1863
NmuCI	GTSAC	3 cut(s)	1139, 1598, 2076
NruI	TCGCGA	1 cut(s)	648
NspI	RCATGY	3 cut(s)	560, 988, 1270
PaeI	GCATGC	1 cut(s)	560
PciI	ACATGT	2 cut(s)	984, 1266
PciSI	GCTCTTC	1 cut(s)	1316
PctI	GAATGC	1 cut(s)	201
PdmI	GAANNNNTTC	1 cut(s)	1121
PfeI	GAWTC	7 cut(s)	224, 233, 288, 778, 879, 1427, 1559
PflMI	CCANNNNNTGG	1 cut(s)	929
PkrI	GCNGC	6 cut(s)	73, 76, 442, 1687, 1737, 1809
PleI	GAGTC	2 cut(s)	12, 1414
PpsI	GAGTC	2 cut(s)	12, 1414
PscI	ACATGT	2 cut(s)	984, 1266
PshBI	ATTAAT	1 cut(s)	270
Psp124BI	GAGCTC	1 cut(s)	630
Psp6I	CCWGG	4 cut(s)	23, 909, 1076, 1326
PspEI	GGTNACC	1 cut(s)	1598
PspFI	CCCAGC	2 cut(s)	1795, 1852
PspGI	CCWGG	4 cut(s)	23, 909, 1076, 1326
PspN4I	GGNNCC	4 cut(s)	170, 915, 1297, 1863
PstI	CTGCAG	1 cut(s)	1809
RruI	TCGCGA	1 cut(s)	648
RsaI	GTAC	4 cut(s)	14, 170, 824, 1271
RsaNI	GTAC	4 cut(s)	13, 169, 823, 1270
RseI	CAYNNNNRTG	1 cut(s)	138
SacI	GAGCTC	1 cut(s)	630
SapI	GCTCTTC	1 cut(s)	1316
SaqAI	TTAA	5 cut(s)	270, 1089, 1205, 1244, 1311
SatI	GCNGC	6 cut(s)	72, 75, 441, 1686, 1736, 1808
Sau3AI	GATC	5 cut(s)	841, 850, 1054, 1365, 1606
SchI	GAGTC	2 cut(s)	13, 1415
ScrFI	CCNGG	7 cut(s)	25, 330, 608, 911, 1078, 1328, 1761
SduI	GDGCHC	4 cut(s)	630, 646, 1650, 1670
SexAI	ACCWGGT	1 cut(s)	1076
SfaNI	GCATC	5 cut(s)	348, 408, 1150, 1180, 2020
SfcI	CTRYAG	1 cut(s)	1805
SmiMI	CAYNNNNRTG	1 cut(s)	138
SmlI	CTYRAG	2 cut(s)	213, 2120
SmoI	CTYRAG	2 cut(s)	213, 2120
SphI	GCATGC	1 cut(s)	560
SsiI	CCGC	4 cut(s)	72, 210, 405, 1508
SspMI	CTAG	6 cut(s)	51, 165, 1026, 1811, 1905, 2099
SstI	GAGCTC	1 cut(s)	630
StyD4I	CCNGG	7 cut(s)	23, 328, 606, 909, 1076, 1326, 1759
StyI	CCWWGG	2 cut(s)	164, 1170
TaaI	ACNGT	4 cut(s)	94, 349, 481, 1780
TaqI	TCGA	2 cut(s)	1158, 1710
TaqII	GACCGA	1 cut(s)	48
TatI	WGTACW	1 cut(s)	1269
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	7 cut(s)	224, 233, 288, 778, 879, 1427, 1559
Tru1I	TTAA	5 cut(s)	270, 1089, 1205, 1244, 1311
Tru9I	TTAA	5 cut(s)	270, 1089, 1205, 1244, 1311
TscAI	CASTG	5 cut(s)	39, 52, 1575, 1675, 1725
TseFI	GTSAC	3 cut(s)	1139, 1598, 2076
TseI	GCWGC	5 cut(s)	74, 440, 1685, 1735, 1807
Tsp45I	GTSAC	3 cut(s)	1139, 1598, 2076
TspDTI	ATGAA	7 cut(s)	105, 557, 1229, 1233, 1361, 1707, 1868
TspGWI	ACGGA	2 cut(s)	435, 1127
TspRI	CASTG	5 cut(s)	39, 52, 1575, 1675, 1725
Van91I	CCANNNNNTGG	1 cut(s)	929
VneI	GTGCAC	1 cut(s)	1666
VspI	ATTAAT	1 cut(s)	270
XapI	RAATTY	5 cut(s)	828, 957, 1200, 1455, 1702
XceI	RCATGY	3 cut(s)	560, 988, 1270
XmaJI	CCTAGG	1 cut(s)	164
XmiI	GTMKAC	1 cut(s)	1353
XmnI	GAANNNNTTC	1 cut(s)	1121
XspI	CTAG	6 cut(s)	51, 165, 1026, 1811, 1905, 2099

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.