Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0011367

Physical Location & Seq

Genomic Coordinates Reverse (-)

8002477 .. 8004208

Gene Structure 1732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g09450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGAATTTGCGGCACTTGATTTCCGGGCAAGCAGTAACCAATGCTTCAGTTATCAGGGGAAGGTTGCGATCGCTCTATGCTTTCACAACCATGGCAGCAGACCCGGTTCCTCTGACGTTTCGTCCACCGAGCTATGGCGGCTCTAAACCCATCAAGAACCCTAATTTCCCAAAACCCTTTTCTCCATTTCACCGATTCATACACTCTGCTCAAGCTCAGGTGGTTGATTCCGAGGATTCCGAGCAGGAGGAAGACGGAGCCGTTAACGATTTCTTGTCCCGGTTCGTGTGGATCATGCGGCAGAAGCTCTCCGAATCGTACCCGGGTTCCGATAAGGCTACCGTCGACGGCATGCTGTTGATTATTGTGGAGAGAGTTGTGGCGGAGATGGAGAAGGGCGGCATTGAGCAGATGCTGGGCACGTCAGGGTCGACGCCATTGGATGATTTTAGTGAGGATTTATGGAAGACGGTGTGGGAGGTGAGCAATATGGTGTTGGAGGACATGAAGAGGGAAGCGAAGAAGGAGAAAATGAAGGGGTTTTTGCAGGAAGAGGAAGTGAAGGAGATGTGTAGATTCGCCGGTGAAGTCGGAATTCGAGGGGATATGCTTAGGGAGCTGAGGTTCAAGTGGGCTCAGGAGAAGATGGAGGAGGCTGAGTTTTATCAGAGCTTGGAGCGGCTTCGAGGGGAGGACAAGAAGGCGGAGGAAGCAGGGGAGCAAGTAGAGGGAATGCAAGGTGAAACCACAGGGGAAGAGGTGAAATCTGAGGTTGTTTCGCTTCCCAAGAGGCGAGGGAAGATCAAGTACAACATTTATGGTCTTGATCTGTCTGACCCCAAGTGGTTTGATGTGGCTAATAGAATCCATGAGGCTGAAGAGATCACTTGGCCTCAGGAACCGAAACCCATATCCGGAAAATGTAAATTGGTTACTGAGAATATTATTCAATCGAATGTGGCGGATGACCAGTCTCCGCTTTTAGCTGAATGGGTAGAGCTACTTCATCCTAGTCGGGTTGATTGGCTCAATTTGCTTTATAGGTTGAAAGAGCAAAACACTGCATTATACTTCAAGGTGGCAGAACTTGTATTGGATGAGAAATCCTTCCAGACAAACATTCGTGATTACTCGATGCTCATTGATGCCCATGCAAAAGAGAACCATCTCGAAGATGCTGAGAGAATTTTGAAGAAGATGAATCAAAATGGTATCATACCTGATATTTTAACTGCCACTAGTTTGGTTCACATGTACAGCAAGGTAGGCAATCTTGACGGTGCCAAACAAGCATTCGAAAGCTTAAGGAGCCAGGGCTTCAAACCTGATGTCAAGGTCTACAATTCGATCGATCATGGCATATGTAAATGCTGGCCAACCAAAATTAGGGGAGTCGTTGATGAGAGAGATGGAAGCAAGAGATATCCAACCCACAAAAGAAATCTTCATGGCATTGCTTCGGTCATTTGCACAACGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009553 GO:0009559 GO:0009561 GO:0009987 GO:0010197 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0030154 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

494

Amino Acids

56.26

Weight (kDa)

5.66

Isoelectric Point (pI)

41.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	364 - 450	2.2e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	366 - 411	5.6e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	377 - 421	6.6e-08	PPR repeat family
PPR_2	PF13041	407 - 456	2e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19520 AT1G19520
fragaria_vesca	FvH4_6g24430
malus_domestica	MD03G1139500.v1.1 MD11G1162300.v1.1
prunus_persica	Prupe.6G124500_v2.0.a1
pyrus_communis	pycom03g09450 pycom11g13170
rosa_chinensis	RchiOBHm_Chr7g0207751
rosa_laevigata	RLG00000003290
rosa_multiflora	Rmu_sc0005968.1_g000001 Rmu_sc0007645.1_g000012
rosa_roxburghii	Rroxscaffold_3G00251180
rosa_rugosa	Rorug07G0099500 Rorug07G0099600
rosa_samantha	Rh7AG232700 Rh7BG228000 Rh7CG246500 Rh7DG238800
rosa_wichuraiana	Rw7G019920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1280
AccBSI	CCGCTC	1 cut(s)	679
AccI	GTMKAC	3 cut(s)	345, 431, 1338
AccIII	TCCGGA	1 cut(s)	914
AciI	CCGC	9 cut(s)	10, 138, 298, 383, 399, 679, 704, 962, 977
AclWI	GGATC	1 cut(s)	299
AcoI	YGGCCR	1 cut(s)	1373
AcsI	RAATTY	3 cut(s)	4, 594, 1185
AcuI	CTGAAG	2 cut(s)	30, 897
AcyI	GRCGYC	1 cut(s)	434
AdeI	CACNNNGTG	1 cut(s)	1476
AfaI	GTAC	3 cut(s)	320, 809, 1256
AfiI	CCNNNNNNNGG	3 cut(s)	134, 914, 1386
AflII	CTTAAG	1 cut(s)	1303
AflIII	ACRYGT	1 cut(s)	1251
AgsI	TTSAA	6 cut(s)	628, 950, 1048, 1075, 1192, 1321
AhdI	GACNNNNNGTC	1 cut(s)	120
AhlI	ACTAGT	1 cut(s)	1238
AjiI	CACGTC	1 cut(s)	423
AjnI	CCWGG	1 cut(s)	1311
AjuI	GAANNNNNNNTTGG	4 cut(s)	163, 195, 1277, 1309
AloI	GAACNNNNNNTCC	2 cut(s)	608, 640
AluBI	AGCT	8 cut(s)	132, 215, 307, 619, 672, 986, 1000, 1302
AluI	AGCT	8 cut(s)	132, 215, 307, 619, 672, 986, 1000, 1302
Alw26I	GTCTC	1 cut(s)	978
AlwI	GGATC	1 cut(s)	299
AlwNI	CAGNNNCTG	1 cut(s)	415
Ama87I	CYCGRG	1 cut(s)	322
Aor13HI	TCCGGA	1 cut(s)	914
AoxI	GGCC	2 cut(s)	890, 1373
ApeKI	GCWGC	1 cut(s)	95
ApoI	RAATTY	3 cut(s)	4, 594, 1185
ArsI	GACNNNNNNTTYG	2 cut(s)	1314, 1346
AsiSI	GCGATCGC	1 cut(s)	71
Asp700I	GAANNNNTTC	1 cut(s)	1106
AsuC2I	CCSGG	5 cut(s)	25, 104, 280, 323, 324
AsuHPI	GGTGA	5 cut(s)	182, 493, 596, 752, 772
AsuII	TTCGAA	1 cut(s)	1296
AvaI	CYCGRG	1 cut(s)	322
AxyI	CCTNAGG	1 cut(s)	894
BaeGI	GKGCMC	1 cut(s)	422
BalI	TGGCCA	1 cut(s)	1375
BanI	GGYRCC	1 cut(s)	1280
BanII	GRGCYC	1 cut(s)	637
BarI	GAAGNNNNNNTAC	4 cut(s)	791, 823, 987, 1019
BbsI	GAAGAC	2 cut(s)	258, 473
BbvCI	CCTCAGC	1 cut(s)	620
BbvI	GCAGC	1 cut(s)	107
BccI	CCATC	5 cut(s)	158, 382, 640, 1173, 1403
BceAI	ACGGC	2 cut(s)	245, 364
BciT130I	CCWGG	1 cut(s)	1313
BcnI	CCSGG	5 cut(s)	25, 104, 280, 323, 324
BcoDI	GTCTC	1 cut(s)	978
BcuI	ACTAGT	1 cut(s)	1238
BfaI	CTAG	2 cut(s)	1011, 1239
BfrI	CTTAAG	1 cut(s)	1303
BisI	GCNGC	6 cut(s)	11, 96, 139, 299, 400, 680
BlsI	GCNGC	6 cut(s)	12, 97, 140, 300, 401, 681
Bme1390I	CCNGG	6 cut(s)	25, 104, 280, 323, 324, 1313
BmeRI	GACNNNNNGTC	1 cut(s)	120
BmeT110I	CYCGRG	1 cut(s)	322
BmgBI	CACGTC	1 cut(s)	423
BmiI	GGNNCC	6 cut(s)	108, 259, 328, 900, 1282, 1310
BmrFI	CCNGG	6 cut(s)	25, 104, 280, 323, 324, 1313
BmsI	GCATC	4 cut(s)	402, 1125, 1135, 1165
BpiI	GAAGAC	2 cut(s)	258, 473
Bpu10I	CCTNAGC	4 cut(s)	216, 611, 620, 636
Bpu14I	TTCGAA	1 cut(s)	1296
BpuEI	CTTGAG	1 cut(s)	195
BpuMI	CCSGG	5 cut(s)	25, 104, 280, 323, 324
Bsa29I	ATCGAT	1 cut(s)	1350
BsaHI	GRCGYC	1 cut(s)	434
BsaJI	CCNNGG	4 cut(s)	90, 231, 322, 1312
BsaWI	WCCGGW	1 cut(s)	914
BsaXI	ACNNNNNCTCC	4 cut(s)	608, 638, 644, 674
Bsc4I	CCNNNNNNNGG	3 cut(s)	134, 914, 1386
Bse118I	RCCGGY	1 cut(s)	581
Bse1I	ACTGG	1 cut(s)	970
Bse21I	CCTNAGG	1 cut(s)	894
Bse3DI	GCAATG	1 cut(s)	1452
BseAI	TCCGGA	1 cut(s)	914
BseBI	CCWGG	1 cut(s)	1313
BseCI	ATCGAT	1 cut(s)	1350
BseDI	CCNNGG	4 cut(s)	90, 231, 322, 1312
BseGI	GGATG	4 cut(s)	448, 970, 1006, 1102
BseLI	CCNNNNNNNGG	3 cut(s)	134, 914, 1386
BseMI	GCAATG	1 cut(s)	1452
BseMII	CTCAG	8 cut(s)	230, 611, 648, 650, 759, 908, 927, 1170
BseNI	ACTGG	1 cut(s)	970
BseRI	GAGGAG	1 cut(s)	665
BseSI	GKGCMC	1 cut(s)	422
BseXI	GCAGC	1 cut(s)	107
BseYI	CCCAGC	1 cut(s)	415
Bsh1285I	CGRYCG	2 cut(s)	71, 1350
BshFI	GGCC	2 cut(s)	892, 1375
BshNI	GGYRCC	1 cut(s)	1280
BshVI	ATCGAT	1 cut(s)	1350
BsiEI	CGRYCG	2 cut(s)	71, 1350
BsiHKCI	CYCGRG	1 cut(s)	322
BsiSI	CCGG	6 cut(s)	24, 104, 280, 323, 582, 915
BslFI	GGGAC	1 cut(s)	262
BslI	CCNNNNNNNGG	3 cut(s)	134, 914, 1386
BsmAI	GTCTC	1 cut(s)	978
BsmFI	GGGAC	1 cut(s)	262
BsmI	GAATGC	2 cut(s)	738, 1292
BsnI	GGCC	2 cut(s)	892, 1375
BsoBI	CYCGRG	1 cut(s)	322
Bsp119I	TTCGAA	1 cut(s)	1296
Bsp1286I	GDGCHC	2 cut(s)	422, 637
Bsp13I	TCCGGA	1 cut(s)	914
Bsp1407I	TGTACA	1 cut(s)	1254
Bsp143I	GATC	7 cut(s)	68, 291, 801, 826, 882, 1347, 1351
Bsp19I	CCATGG	1 cut(s)	90
BspACI	CCGC	9 cut(s)	10, 138, 298, 383, 399, 679, 704, 962, 977
BspANI	GGCC	2 cut(s)	892, 1375
BspCNI	CTCAG	8 cut(s)	229, 612, 649, 649, 760, 907, 928, 1171
BspDI	ATCGAT	1 cut(s)	1350
BspEI	TCCGGA	1 cut(s)	914
BspLI	GGNNCC	6 cut(s)	108, 259, 328, 900, 1282, 1310
BspPI	GGATC	1 cut(s)	299
BspT104I	TTCGAA	1 cut(s)	1296
BspT107I	GGYRCC	1 cut(s)	1280
BspTI	CTTAAG	1 cut(s)	1303
BsrBI	CCGCTC	1 cut(s)	679
BsrDI	GCAATG	1 cut(s)	1452
BsrFI	RCCGGY	1 cut(s)	581
BsrGI	TGTACA	1 cut(s)	1254
BsrI	ACTGG	1 cut(s)	970
BssAI	RCCGGY	1 cut(s)	581
BssECI	CCNNGG	4 cut(s)	90, 231, 322, 1312
BssMI	GATC	7 cut(s)	68, 291, 801, 826, 882, 1347, 1351
BssNI	GRCGYC	1 cut(s)	434
BssT1I	CCWWGG	1 cut(s)	90
Bst2UI	CCWGG	1 cut(s)	1313
Bst4CI	ACNGT	3 cut(s)	343, 472, 1280
Bst6I	CTCTTC	4 cut(s)	503, 546, 750, 873
BstACI	GRCGYC	1 cut(s)	434
BstAFI	CTTAAG	1 cut(s)	1303
BstAUI	TGTACA	1 cut(s)	1254
BstBI	TTCGAA	1 cut(s)	1296
BstC8I	GCNNGC	3 cut(s)	30, 353, 1373
BstDEI	CTNAG	9 cut(s)	216, 611, 620, 636, 657, 768, 894, 936, 1179
BstDSI	CCRYGG	1 cut(s)	90
BstF5I	GGATG	4 cut(s)	448, 970, 1006, 1102
BstKTI	GATC	7 cut(s)	71, 294, 804, 829, 885, 1350, 1354
BstMAI	GTCTC	1 cut(s)	978
BstMBI	GATC	7 cut(s)	68, 291, 801, 826, 882, 1347, 1351
BstMCI	CGRYCG	2 cut(s)	71, 1350
BstMWI	GCNNNNNNNGC	8 cut(s)	138, 304, 616, 710, 1033, 1266, 1289, 1308
BstNI	CCWGG	1 cut(s)	1313
BstNSI	RCATGY	2 cut(s)	355, 1255
BstSCI	CCNGG	6 cut(s)	23, 102, 278, 321, 322, 1311
BstSLI	GKGCMC	1 cut(s)	422
BstV1I	GCAGC	1 cut(s)	107
BstV2I	GAAGAC	2 cut(s)	258, 473
BstXI	CCANNNNNNTGG	1 cut(s)	1243
Bsu15I	ATCGAT	1 cut(s)	1350
Bsu36I	CCTNAGG	1 cut(s)	894
BsuRI	GGCC	2 cut(s)	892, 1375
BsuTUI	ATCGAT	1 cut(s)	1350
BtgI	CCRYGG	1 cut(s)	90
BtrI	CACGTC	1 cut(s)	423
BtsCI	GGATG	4 cut(s)	448, 970, 1006, 1102
BtsI	GCAGTG	1 cut(s)	1059
BtsIMutI	CAGTG	1 cut(s)	1059
Cac8I	GCNNGC	3 cut(s)	30, 353, 1373
CaiI	CAGNNNCTG	1 cut(s)	415
Cfr10I	RCCGGY	1 cut(s)	581
Cfr9I	CCCGGG	1 cut(s)	322
ClaI	ATCGAT	1 cut(s)	1350
CseI	GACGC	1 cut(s)	442
Csp6I	GTAC	3 cut(s)	319, 808, 1255
CviAII	CATG	9 cut(s)	91, 295, 352, 505, 869, 1151, 1252, 1355, 1448
CviQI	GTAC	3 cut(s)	319, 808, 1255
DdeI	CTNAG	9 cut(s)	216, 611, 620, 636, 657, 768, 894, 936, 1179
DpnI	GATC	7 cut(s)	70, 293, 803, 828, 884, 1349, 1353
DpnII	GATC	7 cut(s)	68, 291, 801, 826, 882, 1347, 1351
DraIII	CACNNNGTG	1 cut(s)	1476
DriI	GACNNNNNGTC	1 cut(s)	120
EaeI	YGGCCR	1 cut(s)	1373
Eam1104I	CTCTTC	4 cut(s)	503, 546, 750, 873
Eam1105I	GACNNNNNGTC	1 cut(s)	120
EarI	CTCTTC	4 cut(s)	503, 546, 750, 873
EciI	GGCGGA	3 cut(s)	398, 719, 977
Eco130I	CCWWGG	1 cut(s)	90
Eco24I	GRGCYC	1 cut(s)	637
Eco32I	GATATC	1 cut(s)	1424
Eco57I	CTGAAG	2 cut(s)	30, 897
Eco81I	CCTNAGG	1 cut(s)	894
Eco88I	CYCGRG	1 cut(s)	322
EcoRI	GAATTC	1 cut(s)	594
EcoRII	CCWGG	1 cut(s)	1311
EcoRV	GATATC	1 cut(s)	1424
EcoT14I	CCWWGG	1 cut(s)	90
EcoT38I	GRGCYC	1 cut(s)	637
ErhI	CCWWGG	1 cut(s)	90
FaeI	CATG	9 cut(s)	94, 298, 355, 508, 872, 1154, 1255, 1358, 1451
FaqI	GGGAC	1 cut(s)	262
FatI	CATG	9 cut(s)	90, 294, 351, 504, 868, 1150, 1251, 1354, 1447
FauNDI	CATATG	1 cut(s)	1361
FblI	GTMKAC	3 cut(s)	345, 431, 1338
Fnu4HI	GCNGC	6 cut(s)	11, 96, 139, 299, 400, 680
FokI	GGATG	4 cut(s)	455, 977, 993, 1109
FriOI	GRGCYC	1 cut(s)	637
Fsp4HI	GCNGC	6 cut(s)	11, 96, 139, 299, 400, 680
FspBI	CTAG	2 cut(s)	1011, 1239
GluI	GCNGC	6 cut(s)	11, 96, 139, 299, 400, 680
GsaI	CCCAGC	1 cut(s)	419
HaeIII	GGCC	2 cut(s)	892, 1375
HapII	CCGG	6 cut(s)	24, 104, 280, 323, 582, 915
HgaI	GACGC	1 cut(s)	442
Hin1I	GRCGYC	1 cut(s)	434
Hin1II	CATG	9 cut(s)	94, 298, 355, 508, 872, 1154, 1255, 1358, 1451
HincII	GTYRAC	3 cut(s)	265, 346, 432
HindII	GTYRAC	3 cut(s)	265, 346, 432
HindIII	AAGCTT	1 cut(s)	1300
HinfI	GANTC	8 cut(s)	195, 227, 236, 314, 576, 864, 1201, 1392
HpaI	GTTAAC	1 cut(s)	265
HpaII	CCGG	6 cut(s)	24, 104, 280, 323, 582, 915
HphI	GGTGA	5 cut(s)	182, 493, 596, 752, 772
Hpy166II	GTNNAC	6 cut(s)	125, 265, 346, 432, 1249, 1339
Hpy188I	TCNGA	9 cut(s)	114, 232, 241, 313, 331, 593, 669, 769, 835
Hpy188III	TCNNGA	9 cut(s)	154, 638, 824, 896, 915, 1111, 1124, 1169, 1274
Hpy8I	GTNNAC	6 cut(s)	125, 265, 346, 432, 1249, 1339
Hpy99I	CGWCG	3 cut(s)	347, 350, 436
HpyAV	CCTTC	7 cut(s)	54, 388, 517, 529, 556, 694, 1117
HpyCH4III	ACNGT	3 cut(s)	343, 472, 1280
HpyCH4IV	ACGT	3 cut(s)	116, 422, 1475
HpyCH4V	TGCA	5 cut(s)	547, 736, 1064, 1154, 1470
HpyF10VI	GCNNNNNNNGC	8 cut(s)	138, 304, 616, 710, 1033, 1266, 1289, 1308
HpyF3I	CTNAG	9 cut(s)	216, 611, 620, 636, 657, 768, 894, 936, 1179
HpySE526I	ACGT	3 cut(s)	116, 422, 1475
Hsp92I	GRCGYC	1 cut(s)	434
Hsp92II	CATG	9 cut(s)	94, 298, 355, 508, 872, 1154, 1255, 1358, 1451
Kpn2I	TCCGGA	1 cut(s)	914
KspAI	GTTAAC	1 cut(s)	265
Kzo9I	GATC	7 cut(s)	68, 291, 801, 826, 882, 1347, 1351
LmnI	GCTCC	5 cut(s)	257, 616, 676, 718, 1308
Lsp1109I	GCAGC	1 cut(s)	107
LweI	GCATC	4 cut(s)	402, 1125, 1135, 1165
MaeI	CTAG	2 cut(s)	1011, 1239
MaeII	ACGT	3 cut(s)	116, 422, 1475
MaeIII	GTNAC	2 cut(s)	34, 931
MalI	GATC	7 cut(s)	70, 293, 803, 828, 884, 1349, 1353
MbiI	CCGCTC	1 cut(s)	679
MboI	GATC	7 cut(s)	68, 291, 801, 826, 882, 1347, 1351
MhlI	GDGCHC	2 cut(s)	422, 637
MlsI	TGGCCA	1 cut(s)	1375
MluCI	AATT	8 cut(s)	4, 163, 594, 926, 1030, 1185, 1342, 1383
MluNI	TGGCCA	1 cut(s)	1375
MlyI	GAGTC	1 cut(s)	1401
MmeI	TCCRAC	3 cut(s)	477, 571, 1451
Mox20I	TGGCCA	1 cut(s)	1375
MroI	TCCGGA	1 cut(s)	914
MroXI	GAANNNNTTC	1 cut(s)	1106
MscI	TGGCCA	1 cut(s)	1375
MseI	TTAA	3 cut(s)	264, 1229, 1304
MslI	CAYNNNNRTG	1 cut(s)	89
Msp20I	TGGCCA	1 cut(s)	1375
MspCI	CTTAAG	1 cut(s)	1303
MspI	CCGG	6 cut(s)	24, 104, 280, 323, 582, 915
MspR9I	CCNGG	6 cut(s)	25, 104, 280, 323, 324, 1313
Mva1269I	GAATGC	2 cut(s)	738, 1292
MvaI	CCWGG	1 cut(s)	1313
MwoI	GCNNNNNNNGC	8 cut(s)	138, 304, 616, 710, 1033, 1266, 1289, 1308
NciI	CCSGG	5 cut(s)	25, 104, 280, 323, 324
NcoI	CCATGG	1 cut(s)	90
NdeI	CATATG	1 cut(s)	1361
NdeII	GATC	7 cut(s)	68, 291, 801, 826, 882, 1347, 1351
NlaIII	CATG	9 cut(s)	94, 298, 355, 508, 872, 1154, 1255, 1358, 1451
NlaIV	GGNNCC	6 cut(s)	108, 259, 328, 900, 1282, 1310
NspI	RCATGY	2 cut(s)	355, 1255
NspV	TTCGAA	1 cut(s)	1296
PaeI	GCATGC	1 cut(s)	355
PciI	ACATGT	1 cut(s)	1251
PcsI	WCGNNNNNNNCGW	1 cut(s)	428
PctI	GAATGC	2 cut(s)	738, 1292
PdmI	GAANNNNTTC	1 cut(s)	1106
PfeI	GAWTC	7 cut(s)	195, 227, 236, 314, 576, 864, 1201
PkrI	GCNGC	6 cut(s)	12, 97, 140, 300, 401, 681
Ple19I	CGATCG	2 cut(s)	71, 1350
PleI	GAGTC	1 cut(s)	1400
PpsI	GAGTC	1 cut(s)	1400
PscI	ACATGT	1 cut(s)	1251
Psp6I	CCWGG	1 cut(s)	1311
PspFI	CCCAGC	1 cut(s)	415
PspGI	CCWGG	1 cut(s)	1311
PspN4I	GGNNCC	6 cut(s)	108, 259, 328, 900, 1282, 1310
PstNI	CAGNNNCTG	1 cut(s)	415
PvuI	CGATCG	2 cut(s)	71, 1350
RgaI	GCGATCGC	1 cut(s)	71
RsaI	GTAC	3 cut(s)	320, 809, 1256
RsaNI	GTAC	3 cut(s)	319, 808, 1255
RseI	CAYNNNNRTG	1 cut(s)	89
SalI	GTCGAC	2 cut(s)	344, 430
SaqAI	TTAA	3 cut(s)	264, 1229, 1304
SatI	GCNGC	6 cut(s)	11, 96, 139, 299, 400, 680
Sau3AI	GATC	7 cut(s)	68, 291, 801, 826, 882, 1347, 1351
SchI	GAGTC	1 cut(s)	1401
ScrFI	CCNGG	6 cut(s)	25, 104, 280, 323, 324, 1313
SduI	GDGCHC	2 cut(s)	422, 637
SfaAI	GCGATCGC	1 cut(s)	71
SfaNI	GCATC	4 cut(s)	402, 1125, 1135, 1165
SfuI	TTCGAA	1 cut(s)	1296
SgfI	GCGATCGC	1 cut(s)	71
SgrAI	CRCCGGYG	1 cut(s)	581
SgrDI	CGTCGACG	1 cut(s)	344
SmaI	CCCGGG	1 cut(s)	324
SmiMI	CAYNNNNRTG	1 cut(s)	89
SmlI	CTYRAG	2 cut(s)	210, 1303
SmoI	CTYRAG	2 cut(s)	210, 1303
SpeI	ACTAGT	1 cut(s)	1238
SphI	GCATGC	1 cut(s)	355
Sse9I	AATT	8 cut(s)	4, 163, 594, 926, 1030, 1185, 1342, 1383
SsiI	CCGC	9 cut(s)	10, 138, 298, 383, 399, 679, 704, 962, 977
SspI	AATATT	1 cut(s)	943
SspMI	CTAG	2 cut(s)	1011, 1239
StyD4I	CCNGG	6 cut(s)	23, 102, 278, 321, 322, 1311
StyI	CCWWGG	1 cut(s)	90
TaaI	ACNGT	3 cut(s)	343, 472, 1280
TaiI	ACGT	3 cut(s)	119, 425, 1478
TaqII	GACCGA	1 cut(s)	1450
TasI	AATT	8 cut(s)	4, 163, 594, 926, 1030, 1185, 1342, 1383
TatI	WGTACW	2 cut(s)	807, 1254
TauI	GCSGC	5 cut(s)	13, 141, 301, 402, 682
TfiI	GAWTC	7 cut(s)	195, 227, 236, 314, 576, 864, 1201
Tru1I	TTAA	3 cut(s)	264, 1229, 1304
Tru9I	TTAA	3 cut(s)	264, 1229, 1304
TscAI	CASTG	1 cut(s)	1066
TseI	GCWGC	1 cut(s)	95
TspDTI	ATGAA	7 cut(s)	17, 187, 521, 548, 995, 1214, 1436
TspGWI	ACGGA	1 cut(s)	270
TspMI	CCCGGG	1 cut(s)	322
TspRI	CASTG	1 cut(s)	1066
Vha464I	CTTAAG	1 cut(s)	1303
XapI	RAATTY	3 cut(s)	4, 594, 1185
XceI	RCATGY	2 cut(s)	355, 1255
XmaI	CCCGGG	1 cut(s)	322
XmiI	GTMKAC	3 cut(s)	345, 431, 1338
XmnI	GAANNNNTTC	1 cut(s)	1106
XspI	CTAG	2 cut(s)	1011, 1239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.