Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0011367

Physical Location & Seq

Genomic Coordinates Reverse (-)

14451680 .. 14454730

Gene Structure 3051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1139500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGAATTTGCGGCACTTGATTTCCGGGCAAGCGTTAACCAATGCTTCAGTTATCAGGGGAAGGTTGCGATCGCTCTATGCTTTCACAACCATAGCAGCAGACCCAGTTCCTCTGACGTTTCGTCCACCGAGCTATGGCGGCTCTAAACCCATCAAGAACCCTAATTTCCCAAAACTCTTTTCTCCATTTCACCGATTCATGCACTCTGCTCAAGCTCAGGCGGTTGATTCCGAGGATTCCGAGCAGGAGGAAGACGGAGCCGTTAACGATTTCTTGTCCCGGTTCGTGTGGATCATGCGGCAGAAGCTCTCCGAATCGTACCCGGATTCCGATAAGGCTACCCTCGACGGCATGCTGTTGATTATTGTTGAGAGAGTTGTGGCGGAGATGGAGAAGGGCGGCATTGAGCAGATGCTGGGCACGTCAGGGTCGACGCCATTGGATGATTTTAGTGAGGATTTGTGGAAGACAGTGTGGGAGGTGAGCAATATGGTGTTGGAGGACATGAGGAGGGAAGCGAAGAAGGAGAAAATGAAGGGGTTTTTGCAGGAAGAGGAGGTGAAGGAGATGTGTAGATTCGCCGGTGAAGTCGGAATTCGAGGGGATATGCTTAGGGAGCTGAGGTTCAAGTGGGCTCAGGAGAAGATGGAGGAGGCTGAGTTTTATCAGTGCTTGGAGCGGCTTCGAGAGGAGGACAAGAAGGCGGAGGAAGCAGGGGAGGAAGTAGAGGGAATGCAAGGTGAAACCACAGGGGAAGAGGTGAAGTCTAAGGTTGTTTCGCTTCCCAAGAGGCGAGGGAAGATCAAGTACAACATTTATGGTCTTGATCTGTCTGACCCCAAGTGGGTTGATGTGGCTAATAGAATCCATGAGGCTGAAGAGATCACTTGGCCTCAGGAACCGAAACCCATATCCGGAAAATGCAAATTGGTTACTGAGAATATTATTCAATCGAATGTGGCGGATGACCAGTCTCCGCTTTTAGCTGAATGGGTAGAGCTACTTCAACCTAGTCGGGTTGATTGGCTCAATTTGCTTAATAGGTTGAAAGAGCAAAACACTGCATTATACTTCAAGGTGGCAGAACTCGTATTGGATGAGAAATCCTTCCAGACAAACATTCGTGACTACTCAATGCTCATTGATGCCCATGCAAAAGAGAACCATCTCGAAGATGCTGAGAGAATTTTGAAGAAGATGAATCAAAATGGTATCATACCTGATATTTTAACTGCCACTAGTTTGGTTCACATGTACAGCAAGGTAGGCAATCTTGACGGTGCCAAACAAGCATTTGAAAGCTTAAGGAGCCAGGGCTTCAAACCTGATGTCAAGGTCTACAATTCGATGATCATGGCATATGTAAATGCTGGCCAACCAAAATTGGGGGAGTCGTTGATGAGAGAGATGGAAGCACGAGATATCCAACCCACAAAAGAAATCTTCATGGCATTGCTTCGGTCATTTGCGCAACATGGTGATATTGGTGGAGCTGGACGAATTGCCAATATTATGCAGTTTGCAGGGTTCCAGCCAACATTGGAGTCTTGTACACTGCTTGTTGAAGCATACGGGAAAGCTGGTGACCCTGACCAGGCAAGGAGCAACTTCGATTACATGATGAAAGTTGGGCACAGGCCTGATGACAGATGCACTGCAAGCATGCTAGCTGCTTACGAAAAAAAGAATTTACTGGATAAAGCGCTGAATCTGTTAATGCAGCTTGAAAAGGATGGGTTTGAGCCTGGAGTTGCCACTTACTCCGTTCTTATAGATTGGTTGGGTAAATTGCAGCTAGTTGGTGAAGCTGAGCAGCTATTGGGAAAAATTGCCGAGCAGGGTGAGGCTCCTCCTCTGAAAGTTCATATAGGCCTTTTTGATATGTATGCTAAAGCTGGAGTCGAGAAAAAGGCACTCCAAGCTTTGGGAGTATTGGAGGCTAAGAAGGATCAATTGGGTTCAGAGGAGTTTGAGAGGATAATAAACGGGCTTATAGCTGGTGGGTTTGTGCAGGATGCTCATAGGGTACACGACCTGATGGTGGCCCAGGGTTTTACTGCATCAGAGCCACTTAAGGTGGCACTAATGGCATCTCAAGCTTTTGGGCGCAGAAGGCCCTCAATGAGAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009553 GO:0009559 GO:0009561 GO:0009987 GO:0010197 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0030154 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

711

Amino Acids

79.99

Weight (kDa)

5.4

Isoelectric Point (pI)

43.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	364 - 458	3.3e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	366 - 411	8.9e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	377 - 421	1.1e-07	PPR repeat family
PPR_long	PF17177	382 - 494	8.1e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	402 - 456	1.1e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	442 - 478	6.2e-06	PPR repeat family
PPR_2	PF13041	554 - 595	4.3e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19520 AT1G19520
fragaria_vesca	FvH4_6g24430
malus_domestica	MD03G1139500.v1.1 MD11G1162300.v1.1
prunus_persica	Prupe.6G124500_v2.0.a1
pyrus_communis	pycom03g09450 pycom11g13170
rosa_chinensis	RchiOBHm_Chr7g0207751
rosa_laevigata	RLG00000003290
rosa_multiflora	Rmu_sc0005968.1_g000001 Rmu_sc0007645.1_g000012
rosa_roxburghii	Rroxscaffold_3G00251180
rosa_rugosa	Rorug07G0099500 Rorug07G0099600
rosa_samantha	Rh7AG232700 Rh7BG228000 Rh7CG246500 Rh7DG238800
rosa_wichuraiana	Rw7G019920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1470
AccB1I	GGYRCC	1 cut(s)	1280
AccB7I	CCANNNNNTGG	1 cut(s)	1924
AccBSI	CCGCTC	1 cut(s)	679
AccI	GTMKAC	2 cut(s)	431, 1338
AccIII	TCCGGA	1 cut(s)	914
AclWI	GGATC	2 cut(s)	299, 1956
AcoI	YGGCCR	1 cut(s)	1372
AcsI	RAATTY	4 cut(s)	4, 594, 1185, 1687
AcuI	CTGAAG	2 cut(s)	30, 897
AcyI	GRCGYC	1 cut(s)	434
AfaI	GTAC	5 cut(s)	320, 809, 1256, 1552, 2028
AfeI	AGCGCT	1 cut(s)	1704
AfiI	CCNNNNNNNGG	7 cut(s)	134, 844, 914, 1385, 1594, 1924, 2041
AflII	CTTAAG	2 cut(s)	1303, 2072
AflIII	ACRYGT	1 cut(s)	1251
AhdI	GACNNNNNGTC	1 cut(s)	120
AhlI	ACTAGT	1 cut(s)	1238
AjiI	CACGTC	1 cut(s)	423
AjnI	CCWGG	4 cut(s)	1311, 1593, 1744, 2046
AjuI	GAANNNNNNNTTGG	4 cut(s)	163, 195, 1937, 1969
AloI	GAACNNNNNNTCC	2 cut(s)	608, 640
Alw26I	GTCTC	1 cut(s)	978
AlwI	GGATC	2 cut(s)	299, 1956
AlwNI	CAGNNNCTG	1 cut(s)	415
Aor13HI	TCCGGA	1 cut(s)	914
Aor51HI	AGCGCT	1 cut(s)	1704
AoxI	GGCC	6 cut(s)	890, 1372, 1637, 1870, 2043, 2114
ApeKI	GCWGC	5 cut(s)	95, 1670, 1720, 1792, 1813
ApoI	RAATTY	4 cut(s)	4, 594, 1185, 1687
ArsI	GACNNNNNNTTYG	2 cut(s)	1314, 1346
AsiSI	GCGATCGC	1 cut(s)	71
Asp700I	GAANNNNTTC	1 cut(s)	1106
AspLEI	GCGC	3 cut(s)	1471, 1705, 2109
AspS9I	GGNCC	2 cut(s)	2044, 2115
AsuC2I	CCSGG	3 cut(s)	25, 280, 323
AsuNHI	GCTAGC	1 cut(s)	1666
AxyI	CCTNAGG	1 cut(s)	894
BaeGI	GKGCMC	2 cut(s)	422, 1635
BalI	TGGCCA	1 cut(s)	1374
BanI	GGYRCC	1 cut(s)	1280
BanII	GRGCYC	1 cut(s)	637
BarI	GAAGNNNNNNTAC	4 cut(s)	791, 823, 987, 1019
BauI	CACGAG	1 cut(s)	1416
BbsI	GAAGAC	2 cut(s)	258, 473
BbvCI	CCTCAGC	1 cut(s)	620
BbvI	GCAGC	5 cut(s)	107, 1657, 1732, 1804, 1825
BccI	CCATC	7 cut(s)	158, 382, 640, 1173, 1402, 1727, 2032
BceAI	ACGGC	2 cut(s)	245, 364
BciT130I	CCWGG	4 cut(s)	1313, 1595, 1746, 2048
BclI	TGATCA	1 cut(s)	1350
BcnI	CCSGG	3 cut(s)	25, 280, 323
BcoDI	GTCTC	1 cut(s)	978
BcuI	ACTAGT	1 cut(s)	1238
BfaI	CTAG	4 cut(s)	1011, 1239, 1667, 1796
BfoI	RGCGCY	1 cut(s)	1706
BfrI	CTTAAG	2 cut(s)	1303, 2072
BlpI	GCTNAGC	1 cut(s)	1809
Bme1390I	CCNGG	7 cut(s)	25, 280, 323, 1313, 1595, 1746, 2048
BmeRI	GACNNNNNGTC	1 cut(s)	120
BmgBI	CACGTC	1 cut(s)	423
BmgT120I	GGNCC	2 cut(s)	2044, 2115
BmiI	GGNNCC	6 cut(s)	259, 900, 1282, 1310, 1529, 1848
BmrFI	CCNGG	7 cut(s)	25, 280, 323, 1313, 1595, 1746, 2048
BmrI	ACTGGG	1 cut(s)	98
BmsI	GCATC	7 cut(s)	402, 1135, 1165, 1640, 2005, 2069, 2099
BmtI	GCTAGC	1 cut(s)	1670
BmuI	ACTGGG	1 cut(s)	98
BpiI	GAAGAC	2 cut(s)	258, 473
BpmI	CTGGAG	2 cut(s)	1767, 1917
Bpu10I	CCTNAGC	4 cut(s)	216, 611, 620, 636
Bpu1102I	GCTNAGC	1 cut(s)	1809
BpuEI	CTTGAG	2 cut(s)	195, 2079
BpuMI	CCSGG	3 cut(s)	25, 280, 323
BsaHI	GRCGYC	1 cut(s)	434
BsaJI	CCNNGG	4 cut(s)	231, 1312, 2046, 2047
BsaWI	WCCGGW	1 cut(s)	914
BsaXI	ACNNNNNCTCC	4 cut(s)	608, 638, 644, 674
Bsc4I	CCNNNNNNNGG	7 cut(s)	134, 844, 914, 1385, 1594, 1924, 2041
Bse118I	RCCGGY	1 cut(s)	581
Bse1I	ACTGG	3 cut(s)	104, 970, 1698
Bse21I	CCTNAGG	1 cut(s)	894
Bse3DI	GCAATG	1 cut(s)	1451
BseAI	TCCGGA	1 cut(s)	914
BseBI	CCWGG	4 cut(s)	1313, 1595, 1746, 2048
BseDI	CCNNGG	4 cut(s)	231, 1312, 2046, 2047
BseGI	GGATG	5 cut(s)	448, 970, 1102, 1738, 2020
BseLI	CCNNNNNNNGG	7 cut(s)	134, 844, 914, 1385, 1594, 1924, 2041
BseMI	GCAATG	1 cut(s)	1451
BseMII	CTCAG	8 cut(s)	230, 611, 648, 650, 908, 927, 1170, 1800
BseNI	ACTGG	3 cut(s)	104, 970, 1698
BseRI	GAGGAG	7 cut(s)	523, 569, 665, 704, 1839, 1842, 1979
BseSI	GKGCMC	2 cut(s)	422, 1635
BseXI	GCAGC	5 cut(s)	107, 1657, 1732, 1804, 1825
BseYI	CCCAGC	1 cut(s)	415
BsgI	GTGCAG	1 cut(s)	2030
Bsh1285I	CGRYCG	1 cut(s)	71
BshFI	GGCC	6 cut(s)	892, 1374, 1639, 1872, 2045, 2116
BshNI	GGYRCC	1 cut(s)	1280
BsiEI	CGRYCG	1 cut(s)	71
BsiSI	CCGG	5 cut(s)	24, 280, 323, 582, 915
BslFI	GGGAC	1 cut(s)	262
BslI	CCNNNNNNNGG	7 cut(s)	134, 844, 914, 1385, 1594, 1924, 2041
BsmAI	GTCTC	1 cut(s)	978
BsmFI	GGGAC	1 cut(s)	262
BsmI	GAATGC	1 cut(s)	738
BsnI	GGCC	6 cut(s)	892, 1374, 1639, 1872, 2045, 2116
Bsp1286I	GDGCHC	3 cut(s)	422, 637, 1635
Bsp13I	TCCGGA	1 cut(s)	914
Bsp1407I	TGTACA	2 cut(s)	1254, 1550
Bsp143I	GATC	7 cut(s)	68, 291, 801, 826, 882, 1350, 1948
Bsp1720I	GCTNAGC	1 cut(s)	1809
BspANI	GGCC	6 cut(s)	892, 1374, 1639, 1872, 2045, 2116
BspCNI	CTCAG	8 cut(s)	229, 612, 649, 649, 907, 928, 1171, 1801
BspEI	TCCGGA	1 cut(s)	914
BspLI	GGNNCC	6 cut(s)	259, 900, 1282, 1310, 1529, 1848
BspOI	GCTAGC	1 cut(s)	1670
BspPI	GGATC	2 cut(s)	299, 1956
BspT107I	GGYRCC	1 cut(s)	1280
BspTI	CTTAAG	2 cut(s)	1303, 2072
BsrBI	CCGCTC	1 cut(s)	679
BsrDI	GCAATG	1 cut(s)	1451
BsrFI	RCCGGY	1 cut(s)	581
BsrGI	TGTACA	2 cut(s)	1254, 1550
BsrI	ACTGG	3 cut(s)	104, 970, 1698
BssAI	RCCGGY	1 cut(s)	581
BssECI	CCNNGG	4 cut(s)	231, 1312, 2046, 2047
BssMI	GATC	7 cut(s)	68, 291, 801, 826, 882, 1350, 1948
BssNI	GRCGYC	1 cut(s)	434
BssSI	CACGAG	1 cut(s)	1416
Bst2BI	CACGAG	1 cut(s)	1416
Bst2UI	CCWGG	4 cut(s)	1313, 1595, 1746, 2048
Bst4CI	ACNGT	2 cut(s)	472, 1280
Bst6I	CTCTTC	3 cut(s)	546, 750, 873
BstACI	GRCGYC	1 cut(s)	434
BstAFI	CTTAAG	2 cut(s)	1303, 2072
BstAUI	TGTACA	2 cut(s)	1254, 1550
BstC8I	GCNNGC	6 cut(s)	30, 353, 1372, 1660, 1664, 1668
BstEII	GGTNACC	1 cut(s)	1583
BstF5I	GGATG	5 cut(s)	448, 970, 1102, 1738, 2020
BstH2I	RGCGCY	1 cut(s)	1706
BstHHI	GCGC	3 cut(s)	1471, 1705, 2109
BstKTI	GATC	7 cut(s)	71, 294, 804, 829, 885, 1353, 1951
BstMAI	GTCTC	1 cut(s)	978
BstMBI	GATC	7 cut(s)	68, 291, 801, 826, 882, 1350, 1948
BstMCI	CGRYCG	1 cut(s)	71
BstNI	CCWGG	4 cut(s)	1313, 1595, 1746, 2048
BstNSI	RCATGY	3 cut(s)	355, 1255, 1666
BstPI	GGTNACC	1 cut(s)	1583
BstSCI	CCNGG	7 cut(s)	23, 278, 321, 1311, 1593, 1744, 2046
BstSLI	GKGCMC	2 cut(s)	422, 1635
BstV1I	GCAGC	5 cut(s)	107, 1657, 1732, 1804, 1825
BstV2I	GAAGAC	2 cut(s)	258, 473
BstXI	CCANNNNNNTGG	1 cut(s)	1243
Bsu36I	CCTNAGG	1 cut(s)	894
BsuRI	GGCC	6 cut(s)	892, 1374, 1639, 1872, 2045, 2116
BtrI	CACGTC	1 cut(s)	423
BtsCI	GGATG	5 cut(s)	448, 970, 1102, 1738, 2020
BtsI	GCAGTG	3 cut(s)	1059, 1553, 1653
BtsIMutI	CAGTG	5 cut(s)	477, 674, 1059, 1553, 1653
Cac8I	GCNNGC	6 cut(s)	30, 353, 1372, 1660, 1664, 1668
CaiI	CAGNNNCTG	1 cut(s)	415
CfoI	GCGC	3 cut(s)	1471, 1705, 2109
Cfr10I	RCCGGY	1 cut(s)	581
Cfr13I	GGNCC	2 cut(s)	2044, 2115
CseI	GACGC	1 cut(s)	442
Csp6I	GTAC	5 cut(s)	319, 808, 1255, 1551, 2027
CviQI	GTAC	5 cut(s)	319, 808, 1255, 1551, 2027
DpnI	GATC	7 cut(s)	70, 293, 803, 828, 884, 1352, 1950
DpnII	GATC	7 cut(s)	68, 291, 801, 826, 882, 1350, 1948
DriI	GACNNNNNGTC	1 cut(s)	120
EaeI	YGGCCR	1 cut(s)	1372
Eam1104I	CTCTTC	3 cut(s)	546, 750, 873
Eam1105I	GACNNNNNGTC	1 cut(s)	120
EarI	CTCTTC	3 cut(s)	546, 750, 873
EciI	GGCGGA	3 cut(s)	398, 719, 977
Eco147I	AGGCCT	2 cut(s)	1639, 1872
Eco24I	GRGCYC	1 cut(s)	637
Eco32I	GATATC	1 cut(s)	1423
Eco47III	AGCGCT	1 cut(s)	1704
Eco57I	CTGAAG	2 cut(s)	30, 897
Eco81I	CCTNAGG	1 cut(s)	894
Eco91I	GGTNACC	1 cut(s)	1583
EcoO109I	RGGNCCY	1 cut(s)	2115
EcoO65I	GGTNACC	1 cut(s)	1583
EcoRI	GAATTC	1 cut(s)	594
EcoRII	CCWGG	4 cut(s)	1311, 1593, 1744, 2046
EcoRV	GATATC	1 cut(s)	1423
EcoT38I	GRGCYC	1 cut(s)	637
FaqI	GGGAC	1 cut(s)	262
FauNDI	CATATG	1 cut(s)	1360
FbaI	TGATCA	1 cut(s)	1350
FblI	GTMKAC	2 cut(s)	431, 1338
FokI	GGATG	5 cut(s)	455, 977, 1109, 1745, 2027
FriOI	GRGCYC	1 cut(s)	637
FspBI	CTAG	4 cut(s)	1011, 1239, 1667, 1796
FspI	TGCGCA	1 cut(s)	1470
GlaI	GCGC	3 cut(s)	1470, 1704, 2108
GsaI	CCCAGC	1 cut(s)	419
GsuI	CTGGAG	2 cut(s)	1767, 1917
HaeII	RGCGCY	1 cut(s)	1706
HaeIII	GGCC	6 cut(s)	892, 1374, 1639, 1872, 2045, 2116
HapII	CCGG	5 cut(s)	24, 280, 323, 582, 915
HgaI	GACGC	1 cut(s)	442
HhaI	GCGC	3 cut(s)	1471, 1705, 2109
Hin1I	GRCGYC	1 cut(s)	434
Hin6I	GCGC	3 cut(s)	1469, 1703, 2107
HinP1I	GCGC	3 cut(s)	1469, 1703, 2107
HincII	GTYRAC	3 cut(s)	36, 265, 432
HindII	GTYRAC	3 cut(s)	36, 265, 432
HindIII	AAGCTT	3 cut(s)	1300, 1920, 2097
HpaI	GTTAAC	2 cut(s)	36, 265
HpaII	CCGG	5 cut(s)	24, 280, 323, 582, 915
Hpy166II	GTNNAC	8 cut(s)	36, 125, 265, 432, 1249, 1339, 1553, 2029
Hpy8I	GTNNAC	8 cut(s)	36, 125, 265, 432, 1249, 1339, 1553, 2029
Hpy99I	CGWCG	2 cut(s)	350, 436
HpyAV	CCTTC	9 cut(s)	54, 388, 517, 529, 556, 694, 1117, 1939, 2106
HpyCH4III	ACNGT	2 cut(s)	472, 1280
HpyCH4IV	ACGT	2 cut(s)	116, 422
HpySE526I	ACGT	2 cut(s)	116, 422
Hsp92I	GRCGYC	1 cut(s)	434
HspAI	GCGC	3 cut(s)	1469, 1703, 2107
Kpn2I	TCCGGA	1 cut(s)	914
Ksp22I	TGATCA	1 cut(s)	1350
KspAI	GTTAAC	2 cut(s)	36, 265
Kzo9I	GATC	7 cut(s)	68, 291, 801, 826, 882, 1350, 1948
LmnI	GCTCC	7 cut(s)	257, 616, 676, 1308, 1490, 1602, 1852
Lsp1109I	GCAGC	5 cut(s)	107, 1657, 1732, 1804, 1825
LweI	GCATC	7 cut(s)	402, 1135, 1165, 1640, 2005, 2069, 2099
MaeI	CTAG	4 cut(s)	1011, 1239, 1667, 1796
MaeII	ACGT	2 cut(s)	116, 422
MaeIII	GTNAC	3 cut(s)	931, 1124, 1583
MalI	GATC	7 cut(s)	70, 293, 803, 828, 884, 1352, 1950
MbiI	CCGCTC	1 cut(s)	679
MboI	GATC	7 cut(s)	68, 291, 801, 826, 882, 1350, 1948
MfeI	CAATTG	1 cut(s)	1952
MhlI	GDGCHC	3 cut(s)	422, 637, 1635
MlsI	TGGCCA	1 cut(s)	1374
MluNI	TGGCCA	1 cut(s)	1374
MlyI	GAGTC	3 cut(s)	1400, 1553, 1908
MmeI	TCCRAC	3 cut(s)	477, 571, 1450
Mox20I	TGGCCA	1 cut(s)	1374
MroI	TCCGGA	1 cut(s)	914
MroXI	GAANNNNTTC	1 cut(s)	1106
MscI	TGGCCA	1 cut(s)	1374
MseI	TTAA	7 cut(s)	35, 264, 1038, 1229, 1304, 1715, 2073
Msp20I	TGGCCA	1 cut(s)	1374
MspCI	CTTAAG	2 cut(s)	1303, 2072
MspI	CCGG	5 cut(s)	24, 280, 323, 582, 915
MspR9I	CCNGG	7 cut(s)	25, 280, 323, 1313, 1595, 1746, 2048
MunI	CAATTG	1 cut(s)	1952
Mva1269I	GAATGC	1 cut(s)	738
MvaI	CCWGG	4 cut(s)	1313, 1595, 1746, 2048
NciI	CCSGG	3 cut(s)	25, 280, 323
NdeI	CATATG	1 cut(s)	1360
NdeII	GATC	7 cut(s)	68, 291, 801, 826, 882, 1350, 1948
NheI	GCTAGC	1 cut(s)	1666
NlaIV	GGNNCC	6 cut(s)	259, 900, 1282, 1310, 1529, 1848
NmeAIII	GCCGAG	1 cut(s)	1858
NmuCI	GTSAC	2 cut(s)	1124, 1583
NsbI	TGCGCA	1 cut(s)	1470
NspI	RCATGY	3 cut(s)	355, 1255, 1666
PaeI	GCATGC	2 cut(s)	355, 1666
PasI	CCCWGGG	1 cut(s)	2047
PceI	AGGCCT	2 cut(s)	1639, 1872
PciI	ACATGT	1 cut(s)	1251
PcsI	WCGNNNNNNNCGW	1 cut(s)	428
PctI	GAATGC	1 cut(s)	738
PdmI	GAANNNNTTC	1 cut(s)	1106
PfeI	GAWTC	9 cut(s)	195, 227, 236, 314, 326, 576, 864, 1201, 1708
PflMI	CCANNNNNTGG	1 cut(s)	1924
Ple19I	CGATCG	1 cut(s)	71
PleI	GAGTC	3 cut(s)	1399, 1552, 1907
PpsI	GAGTC	3 cut(s)	1399, 1552, 1907
PscI	ACATGT	1 cut(s)	1251
Psp6I	CCWGG	4 cut(s)	1311, 1593, 1744, 2046
PspEI	GGTNACC	1 cut(s)	1583
PspFI	CCCAGC	1 cut(s)	415
PspGI	CCWGG	4 cut(s)	1311, 1593, 1744, 2046
PspN4I	GGNNCC	6 cut(s)	259, 900, 1282, 1310, 1529, 1848
PspPI	GGNCC	2 cut(s)	2044, 2115
PstNI	CAGNNNCTG	1 cut(s)	415
PvuI	CGATCG	1 cut(s)	71
RgaI	GCGATCGC	1 cut(s)	71
RsaI	GTAC	5 cut(s)	320, 809, 1256, 1552, 2028
RsaNI	GTAC	5 cut(s)	319, 808, 1255, 1551, 2027
SalI	GTCGAC	1 cut(s)	430
SaqAI	TTAA	7 cut(s)	35, 264, 1038, 1229, 1304, 1715, 2073
Sau3AI	GATC	7 cut(s)	68, 291, 801, 826, 882, 1350, 1948
Sau96I	GGNCC	2 cut(s)	2044, 2115
SchI	GAGTC	3 cut(s)	1400, 1553, 1908
ScrFI	CCNGG	7 cut(s)	25, 280, 323, 1313, 1595, 1746, 2048
SduI	GDGCHC	3 cut(s)	422, 637, 1635
SfaAI	GCGATCGC	1 cut(s)	71
SfaNI	GCATC	7 cut(s)	402, 1135, 1165, 1640, 2005, 2069, 2099
SgfI	GCGATCGC	1 cut(s)	71
SgrAI	CRCCGGYG	1 cut(s)	581
SmlI	CTYRAG	4 cut(s)	210, 1303, 2072, 2094
SmoI	CTYRAG	4 cut(s)	210, 1303, 2072, 2094
SpeI	ACTAGT	1 cut(s)	1238
SphI	GCATGC	2 cut(s)	355, 1666
SseBI	AGGCCT	2 cut(s)	1639, 1872
SspI	AATATT	2 cut(s)	943, 1510
SspMI	CTAG	4 cut(s)	1011, 1239, 1667, 1796
StuI	AGGCCT	2 cut(s)	1639, 1872
StyD4I	CCNGG	7 cut(s)	23, 278, 321, 1311, 1593, 1744, 2046
TaaI	ACNGT	2 cut(s)	472, 1280
TaiI	ACGT	2 cut(s)	119, 425
TaqI	TCGA	9 cut(s)	345, 431, 598, 685, 953, 1170, 1346, 1611, 1902
TaqII	GACCGA	1 cut(s)	1449
TatI	WGTACW	3 cut(s)	807, 1254, 1550
TauI	GCSGC	5 cut(s)	13, 141, 301, 402, 682
TfiI	GAWTC	9 cut(s)	195, 227, 236, 314, 326, 576, 864, 1201, 1708
Tru1I	TTAA	7 cut(s)	35, 264, 1038, 1229, 1304, 1715, 2073
Tru9I	TTAA	7 cut(s)	35, 264, 1038, 1229, 1304, 1715, 2073
TscAI	CASTG	5 cut(s)	477, 674, 1066, 1560, 1660
TseFI	GTSAC	2 cut(s)	1124, 1583
TseI	GCWGC	5 cut(s)	95, 1670, 1720, 1792, 1813
Tsp45I	GTSAC	2 cut(s)	1124, 1583
TspDTI	ATGAA	7 cut(s)	17, 187, 548, 1214, 1435, 1637, 1853
TspGWI	ACGGA	2 cut(s)	270, 1753
TspRI	CASTG	5 cut(s)	477, 674, 1066, 1560, 1660
Van91I	CCANNNNNTGG	1 cut(s)	1924
Vha464I	CTTAAG	2 cut(s)	1303, 2072
XapI	RAATTY	4 cut(s)	4, 594, 1185, 1687
XceI	RCATGY	3 cut(s)	355, 1255, 1666
XmiI	GTMKAC	2 cut(s)	431, 1338
XmnI	GAANNNNTTC	1 cut(s)	1106
XspI	CTAG	4 cut(s)	1011, 1239, 1667, 1796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.