Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001962

Physical Location & Seq

Genomic Coordinates Reverse (-)

21495966 .. 21501066

Gene Structure 5101 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g27940.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGCAATAGACACACCCCAAAGCGACATTATCTACCGCTCAAAGCTCCCGGATATCCCCATCCCAAACCACCTCCCTCTCCACTCCTACATCTTCCAAAACAAATCCCACCTGAGCTCAAAGCCATGCATCATCAATGGCACCACTGGCCACATCTACACCTACGCCGACGTCGAGCTCACAGCCAGGAAAGTCGCCTCCGGCCTCAACAAGCTCGGCATCAAACAAGGCGACGTCGTCATGCTCCTCCTCCCCAACACCCCGGAATTCGTTTTCACCTTCCTCGGTGCCTCCTTCCGCGGCGCCATGACCACCGCCGCCAACCCTTTCTTCACTCCGGCCGAGATCGCCAAACAAGCCAAAGCATCAAAAGCGAAGCTGATCATCACTCTCGCTAGCTACTACGACAAGGTTAAGGACTTGTCATCCGATGAGGTCAAGTTGATGTGCATCGACTCCCCGCCACCCGACTCGTCATGTCTCCATTTCTCCGAACTGACACAGTCCAACGAGGACGACGTGCCGGATGTTGACATCAGCCCTAACGACGTCGTGGCGTTGCCCTACTCGTCCGGCACGACGGGGCTGCCGAAAGGGGTGATGCTGACGCACAAAGGGTTGGTGACCAGCGTGTCTCAGCAGGTTGACGGAGAGAATCCGAACTTGTACTACAGCAGCGACGACGTCGTTCTCTGCGTGCTGCCGCTGTTTCACATTTACTCATTGAACTCGGTCTTGCTATGTGGGTTGAGAGCCGGAGCTGCGATTCTGATGATGCAGAAGTTCGAGATTGTGTCTCTTTTGGAGCTCATGCAGAAGCATAGGGTTAGTGTTGCGCCGATCGTGCCTCCCATTGTTCTGGCCATCGCAAAGTTTCCCGATCTCGACAAGTATGATTTGGGGTCGTTAAGGGTGCTGAAGAGTGGAGGAGCACCATTGGGGAAGGAGCTTGAAGACACAGTCAGGGCCAAATTTCCCAATGTCACACTTGGTCAGGGATATGGGATGACGGAGGCAGGACCGGTGTTGACGATGTCATTGGCATTTGCAAAGGAACCCTTCGAGGTAAAACCAGGCGGTTGCGGGACTGTGGTCAGAAATGCCGAATTGAAGATCGTAGACCCTGAAACTGGTGCCTCTTTGCCTCGCAACCAGCCTGGTGAGATTTGCATCAGAGGCCACCAGATCATGAAAGGTTACCTTAATGATCCGGAGGCCACAAGCACAACGATAGACAAGGAAGGATGGCTACACACAGGTGACATAGGCTTCATCGATGATGATGAAGAGCTCTTCATTGTTGATCGACTCAAGGAGCTTATCAAATACAAAGGATTTCAGGTGGCTCCTGCTGAGCTTGAAGCCTTGCTCGTCACCCATCCTCACATTTCTGATGCCGCTGTTGTCCCAATGAAGGATGATGCTGCCGGCGAGGTTCCGGTTGCCTTTGTGGTGAGGTCAAACGGAACTCAGATCACTGAGGATGAAATCAAACAATTTATTTCAAAACAGGTTGTATTCTACAAAAGAATAAATAGAGTATTTTTCATCGAAGCCATTCCCAAGTCTCCATCAGGCAAGATCTTGCGGAAGGAGTTAAGAGCGAAGCTTGCTGCTGGCTTTGCAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016207 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

544

Amino Acids

59.14

Weight (kDa)

5.8

Isoelectric Point (pI)

34.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	40 - 401	3e-97	AMP-binding enzyme
AMP-binding_C	PF13193	452 - 504	3.1e-11	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51680 AT1G51680 AT1G51680 AT3G21240 AT3G21240 AT3G21240
fragaria_vesca	FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940
malus_domestica	MD13G1257800.v1.1 MD17G1229400.v1.1
prunus_persica	Prupe.1G087900_v2.0.a1 Prupe.3G107300_v2.0.a1
pyrus_communis	pycom13g22250 pycom17g23190
rosa_chinensis	RchiOBHm_Chr2g0131501 RchiOBHm_Chr4g0402711 RchiOBHm_Chr5g0057551
rosa_laevigata	RLG00000009052 RLG00000019189
rosa_multiflora	Rmu_co7959539.1_g000001 Rmu_sc0000329.1_g000003 Rmu_sc0002230.1_g000020 Rmu_sc0002451.1_g000001 Rmu_sc0002808.1_g000009
rosa_roxburghii	Rroxscaffold_2G00112820 Rroxscaffold_5G00347470
rosa_rugosa	Rorug02G0297600 Rorug04G0037900
rosa_samantha	Rh2AG350900 Rh2BG357400 Rh2CG336600 Rh2DG375300 Rh4AG115500 Rh4CG122400 Rh4DG108000
rosa_wichuraiana	Rw2G028470 Rw4G009230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	631
AatII	GACGTC	4 cut(s)	174, 237, 552, 687
Acc36I	ACCTGC	1 cut(s)	631
AccB1I	GGYRCC	4 cut(s)	140, 287, 302, 1133
AccBSI	CCGCTC	1 cut(s)	39
AccI	GTMKAC	1 cut(s)	1119
AccII	CGCG	1 cut(s)	300
AccIII	TCCGGA	1 cut(s)	1210
AclWI	GGATC	1 cut(s)	1202
AcoI	YGGCCR	3 cut(s)	148, 339, 861
AcsI	RAATTY	2 cut(s)	266, 971
AcuI	CTGAAG	1 cut(s)	938
AcyI	GRCGYC	5 cut(s)	171, 234, 303, 549, 684
AfaI	GTAC	1 cut(s)	668
AfiI	CCNNNNNNNGG	2 cut(s)	1130, 1414
AgeI	ACCGGT	1 cut(s)	1021
AgsI	TTSAA	5 cut(s)	727, 953, 1111, 1361, 1506
AjiI	CACGTC	1 cut(s)	520
AjnI	CCWGG	3 cut(s)	185, 1072, 1156
AjuI	GAANNNNNNNTTGG	2 cut(s)	314, 346
AleI	CACNNNNGTG	1 cut(s)	1257
Alw21I	GWGCWC	5 cut(s)	119, 180, 810, 934, 1293
Alw26I	GTCTC	4 cut(s)	485, 639, 801, 1572
AlwI	GGATC	1 cut(s)	1202
Aor13HI	TCCGGA	1 cut(s)	1210
AoxI	GGCC	7 cut(s)	148, 202, 339, 861, 966, 1177, 1215
ApeKI	GCWGC	6 cut(s)	586, 675, 700, 761, 1424, 1613
ApoI	RAATTY	2 cut(s)	266, 971
AsiGI	ACCGGT	1 cut(s)	1021
Asp700I	GAANNNNTTC	1 cut(s)	1557
AspLEI	GCGC	2 cut(s)	305, 838
AspS9I	GGNCC	2 cut(s)	966, 1019
AsuC2I	CCSGG	2 cut(s)	50, 263
AsuHPI	GGTGA	7 cut(s)	268, 610, 634, 1172, 1271, 1366, 1465
AsuNHI	GCTAGC	1 cut(s)	395
AvaII	GGWCC	1 cut(s)	1019
BalI	TGGCCA	2 cut(s)	150, 863
BanI	GGYRCC	4 cut(s)	140, 287, 302, 1133
BanII	GRGCYC	4 cut(s)	119, 180, 810, 1293
BarI	GAAGNNNNNNTAC	2 cut(s)	1233, 1265
BbsI	GAAGAC	1 cut(s)	960
Bbv12I	GWGCWC	5 cut(s)	119, 180, 810, 934, 1293
BbvI	GCAGC	6 cut(s)	573, 687, 687, 748, 1411, 1600
BccI	CCATC	5 cut(s)	68, 872, 1239, 1386, 1579
BcgI	CGANNNNNNTGC	2 cut(s)	568, 602
BciT130I	CCWGG	3 cut(s)	187, 1074, 1158
BclI	TGATCA	1 cut(s)	381
BcnI	CCSGG	2 cut(s)	50, 263
BcoDI	GTCTC	4 cut(s)	485, 639, 801, 1572
BfaI	CTAG	1 cut(s)	396
BfmI	CTRYAG	1 cut(s)	670
BfoI	RGCGCY	1 cut(s)	306
BfuAI	ACCTGC	1 cut(s)	631
BglII	AGATCT	1 cut(s)	1581
BlpI	GCTNAGC	1 cut(s)	1353
Bme1390I	CCNGG	5 cut(s)	50, 187, 263, 1074, 1158
Bme18I	GGWCC	1 cut(s)	1019
BmgBI	CACGTC	1 cut(s)	520
BmgT120I	GGNCC	2 cut(s)	966, 1019
BmiI	GGNNCC	7 cut(s)	142, 289, 304, 1056, 1135, 1347, 1437
BmrFI	CCNGG	5 cut(s)	50, 187, 263, 1074, 1158
BmsI	GCATC	9 cut(s)	138, 228, 374, 459, 591, 765, 1179, 1384, 1411
BmtI	GCTAGC	1 cut(s)	399
BoxI	GACNNNNGTC	1 cut(s)	1091
BpiI	GAAGAC	1 cut(s)	960
Bpu10I	CCTNAGC	1 cut(s)	113
Bpu1102I	GCTNAGC	1 cut(s)	1353
BpuEI	CTTGAG	1 cut(s)	1295
BpuMI	CCSGG	2 cut(s)	50, 263
Bsa29I	ATCGAT	1 cut(s)	1275
BsaBI	GATNNNNATC	2 cut(s)	449, 1169
BsaHI	GRCGYC	5 cut(s)	171, 234, 303, 549, 684
BsaJI	CCNNGG	3 cut(s)	261, 283, 298
BsaWI	WCCGGW	3 cut(s)	1021, 1210, 1438
Bsc4I	CCNNNNNNNGG	2 cut(s)	1130, 1414
Bse118I	RCCGGY	2 cut(s)	1021, 1427
Bse1I	ACTGG	2 cut(s)	151, 1135
Bse8I	GATNNNNATC	2 cut(s)	449, 1169
BseAI	TCCGGA	1 cut(s)	1210
BseBI	CCWGG	3 cut(s)	187, 1074, 1158
BseCI	ATCGAT	1 cut(s)	1275
BseDI	CCNNGG	3 cut(s)	261, 283, 298
BseGI	GGATG	8 cut(s)	60, 425, 532, 1011, 1250, 1378, 1423, 1489
BseJI	GATNNNNATC	2 cut(s)	449, 1169
BseLI	CCNNNNNNNGG	2 cut(s)	1130, 1414
BseMII	CTCAG	5 cut(s)	104, 650, 1344, 1470, 1484
BseNI	ACTGG	2 cut(s)	151, 1135
BseRI	GAGGAG	3 cut(s)	236, 239, 942
BseX3I	CGGCCG	1 cut(s)	339
BseXI	GCAGC	6 cut(s)	573, 687, 687, 748, 1411, 1600
Bsh1236I	CGCG	1 cut(s)	300
Bsh1285I	CGRYCG	2 cut(s)	342, 843
BshFI	GGCC	7 cut(s)	150, 204, 341, 863, 968, 1179, 1217
BshNI	GGYRCC	4 cut(s)	140, 287, 302, 1133
BshTI	ACCGGT	1 cut(s)	1021
BshVI	ATCGAT	1 cut(s)	1275
BsiEI	CGRYCG	2 cut(s)	342, 843
BsiHKAI	GWGCWC	5 cut(s)	119, 180, 810, 934, 1293
BslFI	GGGAC	2 cut(s)	1099, 1391
BslI	CCNNNNNNNGG	2 cut(s)	1130, 1414
BsmAI	GTCTC	4 cut(s)	485, 639, 801, 1572
BsmFI	GGGAC	2 cut(s)	1099, 1391
BsnI	GGCC	7 cut(s)	150, 204, 341, 863, 968, 1179, 1217
Bsp1286I	GDGCHC	5 cut(s)	119, 180, 810, 934, 1293
Bsp13I	TCCGGA	1 cut(s)	1210
Bsp1720I	GCTNAGC	1 cut(s)	1353
BspANI	GGCC	7 cut(s)	150, 204, 341, 863, 968, 1179, 1217
BspCNI	CTCAG	5 cut(s)	105, 649, 1345, 1471, 1483
BspDI	ATCGAT	1 cut(s)	1275
BspEI	TCCGGA	1 cut(s)	1210
BspFNI	CGCG	1 cut(s)	300
BspHI	TCATGA	1 cut(s)	1188
BspLI	GGNNCC	7 cut(s)	142, 289, 304, 1056, 1135, 1347, 1437
BspMI	ACCTGC	1 cut(s)	631
BspOI	GCTAGC	1 cut(s)	399
BspPI	GGATC	1 cut(s)	1202
BspQI	GCTCTTC	2 cut(s)	1281, 1298
BspT107I	GGYRCC	4 cut(s)	140, 287, 302, 1133
BsrBI	CCGCTC	1 cut(s)	39
BsrFI	RCCGGY	2 cut(s)	1021, 1427
BsrI	ACTGG	2 cut(s)	151, 1135
BssAI	RCCGGY	2 cut(s)	1021, 1427
BssECI	CCNNGG	3 cut(s)	261, 283, 298
BssNI	GRCGYC	5 cut(s)	171, 234, 303, 549, 684
Bst2UI	CCWGG	3 cut(s)	187, 1074, 1158
Bst4CI	ACNGT	3 cut(s)	504, 961, 1090
Bst6I	CTCTTC	3 cut(s)	914, 1281, 1298
BstACI	GRCGYC	5 cut(s)	171, 234, 303, 549, 684
BstC8I	GCNNGC	5 cut(s)	397, 698, 1429, 1611, 1618
BstDEI	CTNAG	5 cut(s)	113, 636, 1353, 1470, 1479
BstDSI	CCRYGG	1 cut(s)	298
BstEII	GGTNACC	2 cut(s)	622, 1196
BstF5I	GGATG	8 cut(s)	60, 425, 532, 1011, 1250, 1378, 1423, 1489
BstFNI	CGCG	1 cut(s)	300
BstH2I	RGCGCY	1 cut(s)	306
BstHHI	GCGC	2 cut(s)	305, 838
BstMAI	GTCTC	4 cut(s)	485, 639, 801, 1572
BstMCI	CGRYCG	2 cut(s)	342, 843
BstMWI	GCNNNNNNNGC	9 cut(s)	147, 347, 356, 371, 761, 844, 1176, 1610, 1622
BstNI	CCWGG	3 cut(s)	187, 1074, 1158
BstPAI	GACNNNNGTC	1 cut(s)	1091
BstPI	GGTNACC	2 cut(s)	622, 1196
BstSCI	CCNGG	5 cut(s)	48, 185, 261, 1072, 1156
BstSFI	CTRYAG	1 cut(s)	670
BstUI	CGCG	1 cut(s)	300
BstV1I	GCAGC	6 cut(s)	573, 687, 687, 748, 1411, 1600
BstV2I	GAAGAC	1 cut(s)	960
BstX2I	RGATCY	1 cut(s)	1581
BstXI	CCANNNNNNTGG	1 cut(s)	859
BstYI	RGATCY	1 cut(s)	1581
BstZI	CGGCCG	1 cut(s)	339
Bsu15I	ATCGAT	1 cut(s)	1275
BsuRI	GGCC	7 cut(s)	150, 204, 341, 863, 968, 1179, 1217
BsuTUI	ATCGAT	1 cut(s)	1275
BtgI	CCRYGG	1 cut(s)	298
BtgZI	GCGATG	1 cut(s)	850
BtrI	CACGTC	1 cut(s)	520
BtsCI	GGATG	8 cut(s)	60, 425, 532, 1011, 1250, 1378, 1423, 1489
BtsIMutI	CAGTG	2 cut(s)	144, 1476
BveI	ACCTGC	1 cut(s)	631
Cac8I	GCNNGC	5 cut(s)	397, 698, 1429, 1611, 1618
CciI	TCATGA	1 cut(s)	1188
CfoI	GCGC	2 cut(s)	305, 838
Cfr10I	RCCGGY	2 cut(s)	1021, 1427
Cfr13I	GGNCC	2 cut(s)	966, 1019
Cfr42I	CCGCGG	1 cut(s)	301
ClaI	ATCGAT	1 cut(s)	1275
CseI	GACGC	1 cut(s)	616
Csp6I	GTAC	1 cut(s)	667
CspAI	ACCGGT	1 cut(s)	1021
CviAII	CATG	6 cut(s)	126, 241, 307, 477, 811, 1189
CviQI	GTAC	1 cut(s)	667
DdeI	CTNAG	5 cut(s)	113, 636, 1353, 1470, 1479
DinI	GGCGCC	1 cut(s)	304
DrdI	GACNNNNNNGTC	1 cut(s)	631
DseDI	GACNNNNNNGTC	1 cut(s)	631
EaeI	YGGCCR	3 cut(s)	148, 339, 861
EagI	CGGCCG	1 cut(s)	339
Eam1104I	CTCTTC	3 cut(s)	914, 1281, 1298
EarI	CTCTTC	3 cut(s)	914, 1281, 1298
Ecl136II	GAGCTC	4 cut(s)	117, 178, 808, 1291
EclXI	CGGCCG	1 cut(s)	339
Eco24I	GRGCYC	4 cut(s)	119, 180, 810, 1293
Eco32I	GATATC	1 cut(s)	55
Eco47I	GGWCC	1 cut(s)	1019
Eco52I	CGGCCG	1 cut(s)	339
Eco53kI	GAGCTC	4 cut(s)	117, 178, 808, 1291
Eco57I	CTGAAG	1 cut(s)	938
Eco91I	GGTNACC	2 cut(s)	622, 1196
EcoICRI	GAGCTC	4 cut(s)	117, 178, 808, 1291
EcoO65I	GGTNACC	2 cut(s)	622, 1196
EcoRI	GAATTC	1 cut(s)	266
EcoRII	CCWGG	3 cut(s)	185, 1072, 1156
EcoRV	GATATC	1 cut(s)	55
EcoT22I	ATGCAT	1 cut(s)	131
EcoT38I	GRGCYC	4 cut(s)	119, 180, 810, 1293
EgeI	GGCGCC	1 cut(s)	304
EheI	GGCGCC	1 cut(s)	304
FaeI	CATG	6 cut(s)	129, 244, 310, 480, 814, 1192
FalI	AAGNNNNNCTT	4 cut(s)	1043, 1075, 1185, 1217
FaqI	GGGAC	2 cut(s)	1099, 1391
FatI	CATG	6 cut(s)	125, 240, 306, 476, 810, 1188
FauI	CCCGC	2 cut(s)	468, 1076
FbaI	TGATCA	1 cut(s)	381
FblI	GTMKAC	1 cut(s)	1119
FokI	GGATG	8 cut(s)	47, 412, 539, 1018, 1257, 1365, 1430, 1496
FriOI	GRGCYC	4 cut(s)	119, 180, 810, 1293
FspBI	CTAG	1 cut(s)	396
GlaI	GCGC	2 cut(s)	304, 837
HaeII	RGCGCY	1 cut(s)	306
HaeIII	GGCC	7 cut(s)	150, 204, 341, 863, 968, 1179, 1217
HgaI	GACGC	1 cut(s)	616
HhaI	GCGC	2 cut(s)	305, 838
Hin1I	GRCGYC	5 cut(s)	171, 234, 303, 549, 684
Hin1II	CATG	6 cut(s)	129, 244, 310, 480, 814, 1192
Hin6I	GCGC	2 cut(s)	303, 836
HinP1I	GCGC	2 cut(s)	303, 836
HincII	GTYRAC	3 cut(s)	532, 646, 1029
HindII	GTYRAC	3 cut(s)	532, 646, 1029
HindIII	AAGCTT	1 cut(s)	1607
HinfI	GANTC	5 cut(s)	455, 470, 655, 766, 1308
HphI	GGTGA	7 cut(s)	268, 610, 634, 1172, 1271, 1366, 1465
Hpy166II	GTNNAC	4 cut(s)	532, 646, 1029, 1120
Hpy188I	TCNGA	8 cut(s)	430, 493, 660, 771, 1097, 1175, 1393, 1473
Hpy188III	TCNNGA	5 cut(s)	787, 878, 884, 1189, 1211
Hpy8I	GTNNAC	4 cut(s)	532, 646, 1029, 1120
HpyAV	CCTTC	7 cut(s)	289, 304, 937, 1069, 1235, 1408, 1585
HpyCH4III	ACNGT	3 cut(s)	504, 961, 1090
HpyCH4IV	ACGT	5 cut(s)	171, 234, 519, 549, 684
HpyCH4V	TGCA	7 cut(s)	129, 450, 778, 814, 1049, 1170, 1625
HpyF10VI	GCNNNNNNNGC	9 cut(s)	147, 347, 356, 371, 761, 844, 1176, 1610, 1622
HpyF3I	CTNAG	5 cut(s)	113, 636, 1353, 1470, 1479
HpySE526I	ACGT	5 cut(s)	171, 234, 519, 549, 684
Hsp92I	GRCGYC	5 cut(s)	171, 234, 303, 549, 684
Hsp92II	CATG	6 cut(s)	129, 244, 310, 480, 814, 1192
HspAI	GCGC	2 cut(s)	303, 836
KasI	GGCGCC	1 cut(s)	302
Kpn2I	TCCGGA	1 cut(s)	1210
KroI	GCCGGC	1 cut(s)	1427
KroNI	GCCGGC	1 cut(s)	1429
Ksp22I	TGATCA	1 cut(s)	381
KspI	CCGCGG	1 cut(s)	301
LguI	GCTCTTC	2 cut(s)	1281, 1298
LmnI	GCTCC	8 cut(s)	51, 249, 758, 805, 929, 946, 1315, 1351
Lsp1109I	GCAGC	6 cut(s)	573, 687, 687, 748, 1411, 1600
LweI	GCATC	9 cut(s)	138, 228, 374, 459, 591, 765, 1179, 1384, 1411
MaeI	CTAG	1 cut(s)	396
MaeII	ACGT	5 cut(s)	171, 234, 519, 549, 684
MaeIII	GTNAC	5 cut(s)	622, 982, 1196, 1259, 1372
MbiI	CCGCTC	1 cut(s)	39
MboII	GAAGA	7 cut(s)	85, 322, 931, 965, 1123, 1285, 1298
MflI	RGATCY	1 cut(s)	1581
MhlI	GDGCHC	5 cut(s)	119, 180, 810, 934, 1293
MlsI	TGGCCA	2 cut(s)	150, 863
MluCI	AATT	5 cut(s)	266, 971, 1106, 1496, 1627
MluNI	TGGCCA	2 cut(s)	150, 863
Mly113I	GGCGCC	1 cut(s)	303
MlyI	GAGTC	3 cut(s)	449, 464, 1302
MmeI	TCCRAC	1 cut(s)	531
Mox20I	TGGCCA	2 cut(s)	150, 863
Mph1103I	ATGCAT	1 cut(s)	131
MroI	TCCGGA	1 cut(s)	1210
MroNI	GCCGGC	1 cut(s)	1427
MroXI	GAANNNNTTC	1 cut(s)	1557
MscI	TGGCCA	2 cut(s)	150, 863
MseI	TTAA	4 cut(s)	414, 908, 1203, 1598
MslI	CAYNNNNRTG	1 cut(s)	1257
Msp20I	TGGCCA	2 cut(s)	150, 863
MspA1I	CMGCKG	3 cut(s)	300, 706, 1400
MspR9I	CCNGG	5 cut(s)	50, 187, 263, 1074, 1158
MvaI	CCWGG	3 cut(s)	187, 1074, 1158
MvnI	CGCG	1 cut(s)	300
MwoI	GCNNNNNNNGC	9 cut(s)	147, 347, 356, 371, 761, 844, 1176, 1610, 1622
NaeI	GCCGGC	1 cut(s)	1429
NarI	GGCGCC	1 cut(s)	303
NciI	CCSGG	2 cut(s)	50, 263
NgoMIV	GCCGGC	1 cut(s)	1427
NheI	GCTAGC	1 cut(s)	395
NlaIII	CATG	6 cut(s)	129, 244, 310, 480, 814, 1192
NlaIV	GGNNCC	7 cut(s)	142, 289, 304, 1056, 1135, 1347, 1437
NmeAIII	GCCGAG	2 cut(s)	195, 367
NmuCI	GTSAC	4 cut(s)	622, 982, 1259, 1372
NsiI	ATGCAT	1 cut(s)	131
OliI	CACNNNNGTG	1 cut(s)	1257
PagI	TCATGA	1 cut(s)	1188
PciSI	GCTCTTC	2 cut(s)	1281, 1298
PcsI	WCGNNNNNNNCGW	5 cut(s)	171, 516, 575, 587, 693
PdiI	GCCGGC	1 cut(s)	1429
PdmI	GAANNNNTTC	1 cut(s)	1557
PfeI	GAWTC	2 cut(s)	655, 766
PflFI	GACNNNGTC	5 cut(s)	236, 502, 683, 959, 1033
PfoI	TCCNGGA	1 cut(s)	48
PinAI	ACCGGT	1 cut(s)	1021
Ple19I	CGATCG	1 cut(s)	843
PleI	GAGTC	3 cut(s)	449, 464, 1302
PluTI	GGCGCC	1 cut(s)	306
PpsI	GAGTC	3 cut(s)	449, 464, 1302
PshAI	GACNNNNGTC	1 cut(s)	1091
Psp124BI	GAGCTC	4 cut(s)	119, 180, 810, 1293
Psp6I	CCWGG	3 cut(s)	185, 1072, 1156
PspEI	GGTNACC	2 cut(s)	622, 1196
PspGI	CCWGG	3 cut(s)	185, 1072, 1156
PspN4I	GGNNCC	7 cut(s)	142, 289, 304, 1056, 1135, 1347, 1437
PspPI	GGNCC	2 cut(s)	966, 1019
PsrI	GAACNNNNNNTAC	2 cut(s)	653, 685
PsuI	RGATCY	1 cut(s)	1581
PsyI	GACNNNGTC	5 cut(s)	236, 502, 683, 959, 1033
PvuI	CGATCG	1 cut(s)	843
RsaI	GTAC	1 cut(s)	668
RsaNI	GTAC	1 cut(s)	667
RseI	CAYNNNNRTG	1 cut(s)	1257
SacI	GAGCTC	4 cut(s)	119, 180, 810, 1293
SacII	CCGCGG	1 cut(s)	301
SapI	GCTCTTC	2 cut(s)	1281, 1298
SaqAI	TTAA	4 cut(s)	414, 908, 1203, 1598
Sau96I	GGNCC	2 cut(s)	966, 1019
SchI	GAGTC	3 cut(s)	449, 464, 1302
ScrFI	CCNGG	5 cut(s)	50, 187, 263, 1074, 1158
SduI	GDGCHC	5 cut(s)	119, 180, 810, 934, 1293
SfaNI	GCATC	9 cut(s)	138, 228, 374, 459, 591, 765, 1179, 1384, 1411
SfcI	CTRYAG	1 cut(s)	670
SfoI	GGCGCC	1 cut(s)	304
Sfr303I	CCGCGG	1 cut(s)	301
SgrBI	CCGCGG	1 cut(s)	301
SinI	GGWCC	1 cut(s)	1019
SmiMI	CAYNNNNRTG	1 cut(s)	1257
SmlI	CTYRAG	1 cut(s)	1310
SmoI	CTYRAG	1 cut(s)	1310
Sse9I	AATT	5 cut(s)	266, 971, 1106, 1496, 1627
SspDI	GGCGCC	1 cut(s)	302
SspMI	CTAG	1 cut(s)	396
SstI	GAGCTC	4 cut(s)	119, 180, 810, 1293
StyD4I	CCNGG	5 cut(s)	48, 185, 261, 1072, 1156
TaaI	ACNGT	3 cut(s)	504, 961, 1090
TaiI	ACGT	5 cut(s)	174, 237, 522, 552, 687
TaqI	TCGA	8 cut(s)	174, 453, 786, 885, 1062, 1275, 1306, 1551
TaqII	GACCGA	1 cut(s)	721
TasI	AATT	5 cut(s)	266, 971, 1106, 1496, 1627
TatI	WGTACW	1 cut(s)	666
TauI	GCSGC	4 cut(s)	303, 320, 706, 1400
TfiI	GAWTC	2 cut(s)	655, 766
Tru1I	TTAA	4 cut(s)	414, 908, 1203, 1598
Tru9I	TTAA	4 cut(s)	414, 908, 1203, 1598
TscAI	CASTG	2 cut(s)	151, 1483
TseFI	GTSAC	4 cut(s)	622, 982, 1259, 1372
TseI	GCWGC	6 cut(s)	586, 675, 700, 761, 1424, 1613
Tsp45I	GTSAC	4 cut(s)	622, 982, 1259, 1372
TspDTI	ATGAA	7 cut(s)	1205, 1261, 1285, 1299, 1427, 1500, 1537
TspGWI	ACGGA	3 cut(s)	663, 1025, 1479
TspRI	CASTG	2 cut(s)	151, 1483
Tth111I	GACNNNGTC	5 cut(s)	236, 502, 683, 959, 1033
VpaK11BI	GGWCC	1 cut(s)	1019
XapI	RAATTY	2 cut(s)	266, 971
XmiI	GTMKAC	1 cut(s)	1119
XmnI	GAANNNNTTC	1 cut(s)	1557
XspI	CTAG	1 cut(s)	396
ZraI	GACGTC	4 cut(s)	172, 235, 550, 685
Zsp2I	ATGCAT	1 cut(s)	131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.