Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0001962

Physical Location & Seq

Genomic Coordinates Forward (+)

24916293 .. 24921366

Gene Structure 5074 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG115500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGAACAGGTGGACGTTGACGATTAGAAGTGTCAAATGTTTCGGTGACAGACGCGTTACCGAGAGAGTTGAGTGTGTTTCTATTTATGCGATAATTGGATGCGATCTGCCCTTGATAAATTTGTTAATACCGGACAGGTCCAGTCACATTTCACCGACACACCTACTTGTATATTACATCAACCAAAACTCAAACCAAAACAGGGAGAGACTTCACCGCAAGAAAGCTAAACCCAACCCAATCCCCACCCTCTCCTTTTCTCTCTCACATTTTCCGTTCGCACTTTCCAAAATGGAGAACAAACAAGACAGTCACGAATTCATTTTCCGTTCAAAGCTGCCGGACATTTACATCCCGAACCACCTCCCTCTCCACACCTACTGCTTCGAGAACATCTCCCAATTCCATGACCGTCCCTGCCTGATCAACGGCAACACCGGCGAGACCTTCACCTATGCCGACGTCGAGCTCACCTCCCGCAGAGTCGCCGCCGGCCTCGACAAGCTCGGCATTCACCAGGGTGACGTCGTCATGCTCCTCCTCCAAAACTGCCCTGAATTCGCCTTCGCATTCCTCGGCGCCTCTTACGTCGGAGGCATCATCACTACGGCGAACCCCTTCTACACTCCTGCCGAGGTCGCCAAGCAAGCCACTGCCTCCAACGCCAAGCTGATCATAACTCAAGCGGCCTACGTGGACAAGGTGAAGGACTTTGCCAAACTCAACAACGTTAAACTCATGTGCGTGGATGAGACTTCGTCGTCATCAGAGGATGTGTTGCATTTCTCCCAGCTGACGTCGGCTGAAGAGAGCGAAACCCCGGCGGTGAAAATCAACCCGGACGACGTGGTGGCGCTGCCGTACTCGTCGGGGACGACGGGGCTGCCGAAAGGGGTGATGCTGACGCACAAGGGGTTGGTGACGAGCGTGGCGCAGCAGGTCGACGGCGAAAACCCAAACCTCTACTTTCACAAGGAGGACGTGATCCTCTGCGTGCTGCCGTTGTTCCACATCTACTCCCTCAACTCGGTGTTCCTCTGCGGACTCCGCGTCGGAGCGACGATCCTGATCATGCAGAAGTTTGAGATCAACAAGTTGTTGGAGTTGGTGGAAAAGGAAAAGGTGACTATAGCGCCGTTTGTGCCTCCGATTGTTTTGAACATCGCCAAGAGTCCGGACCTGCACCGGTACGACTTGTCGTCGATTAGGATGGTGATGTCCGGGGCGGCTCCGATGGGGAAGGAGCTCGAGGACACTGTCAGGGCTAAACTGCCCGATGCCAAACTCGGACAGGGTTATGGGATGACCGAGGCTGGACCAGTTCTATCCATGTGCTTGGCATTTGCAAAAGAACCCTATGAGATAAAATCAGGTGCGTGCGGGACCGTCGTAAGAAATGCTGAGATGAAGATCATCGACCCCGACACCAATGAATCCCTTCCCCGAAACCAATCCGGAGAGATTTGCATCCGAGGTAGCCAAATCATGAAAGGATACCTGAATGACCCTGAGGCGACTGAGAGGACCATAGACAAAGAAGGATGGTTGCACACTGGTGATATAGGGTACATCGATGACGACGATGAGATCTTCATCGTTGACCGTTTAAAAGAACTCATTAAATACAAAGGTTTCCAAGTCGCACCGGCTGAGCTCGAAGCCATGTTGATCTCCCATCCCAACCTCTCCGATGCCGCTGTTGTGCCGATGAAGGATGAGGCTGCAGGAGAGGTTCCCATTGCATTTGTTGTAAGATCAAACGGTTCCAAGATATCTGAGGATGACATTAAGCAATACATATCAAAACAGGTGGTGTTCTACAAGAGAATAAGTAGGGTTTTCTTCACAGACAAAATCCCAAAAGCTCCTTCTGGCAAAATATTGAGGAAAGACTTGAGAGCAAGGCTGGCTGCAGGTCTACCCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

642

Amino Acids

71.29

Weight (kDa)

6.37

Isoelectric Point (pI)

36.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	130 - 500	1.8e-101	AMP-binding enzyme
AMP-binding_C	PF13193	551 - 626	1.7e-16	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51680 AT1G51680 AT1G51680 AT3G21240 AT3G21240 AT3G21240
fragaria_vesca	FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940
malus_domestica	MD13G1257800.v1.1 MD17G1229400.v1.1
prunus_persica	Prupe.1G087900_v2.0.a1 Prupe.3G107300_v2.0.a1
pyrus_communis	pycom13g22250 pycom17g23190
rosa_chinensis	RchiOBHm_Chr2g0131501 RchiOBHm_Chr4g0402711 RchiOBHm_Chr5g0057551
rosa_laevigata	RLG00000009052 RLG00000019189
rosa_multiflora	Rmu_co7959539.1_g000001 Rmu_sc0000329.1_g000003 Rmu_sc0002230.1_g000020 Rmu_sc0002451.1_g000001 Rmu_sc0002808.1_g000009
rosa_roxburghii	Rroxscaffold_2G00112820 Rroxscaffold_5G00347470
rosa_rugosa	Rorug02G0297600 Rorug04G0037900
rosa_samantha	Rh2AG350900 Rh2BG357400 Rh2CG336600 Rh2DG375300 Rh4AG115500 Rh4CG122400 Rh4DG108000
rosa_wichuraiana	Rw2G028470 Rw4G009230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	760
AatII	GACGTC	3 cut(s)	465, 528, 800
Acc36I	ACCTGC	3 cut(s)	928, 1188, 1904
AccB1I	GGYRCC	1 cut(s)	578
AccI	GTMKAC	2 cut(s)	942, 1918
AccII	CGCG	2 cut(s)	54, 1050
AccIII	TCCGGA	2 cut(s)	1174, 1454
AclI	AACGTT	1 cut(s)	729
AclWI	GGATC	2 cut(s)	979, 1057
AcsI	RAATTY	3 cut(s)	118, 317, 557
AcuI	CTGAAG	1 cut(s)	825
AcyI	GRCGYC	4 cut(s)	462, 525, 579, 797
AfaI	GTAC	3 cut(s)	863, 1190, 1568
AfiI	CCNNNNNNNGG	2 cut(s)	202, 1027
AflIII	ACRYGT	1 cut(s)	52
AgeI	ACCGGT	1 cut(s)	1185
AgsI	TTSAA	2 cut(s)	333, 1159
AhdI	GACNNNNNGTC	2 cut(s)	1049, 1198
AjiI	CACGTC	2 cut(s)	847, 982
AjnI	CCWGG	1 cut(s)	516
AjuI	GAANNNNNNNTTGG	2 cut(s)	1852, 1884
AleI	CACNNNNGTG	2 cut(s)	519, 1554
AluBI	AGCT	9 cut(s)	227, 337, 469, 505, 670, 793, 1246, 1654, 1865
AluI	AGCT	9 cut(s)	227, 337, 469, 505, 670, 793, 1246, 1654, 1865
Alw21I	GWGCWC	3 cut(s)	471, 1248, 1656
Alw26I	GTCTC	3 cut(s)	202, 437, 746
AlwI	GGATC	2 cut(s)	979, 1057
Ama87I	CYCGRG	1 cut(s)	1247
Aor13HI	TCCGGA	2 cut(s)	1174, 1454
AoxI	GGCC	2 cut(s)	493, 687
ApeKI	GCWGC	7 cut(s)	337, 856, 883, 934, 997, 1721, 1910
ApoI	RAATTY	3 cut(s)	118, 317, 557
AsiGI	ACCGGT	1 cut(s)	1185
Asp700I	GAANNNNTTC	2 cut(s)	617, 1437
AspLEI	GCGC	4 cut(s)	581, 856, 934, 1135
AspS9I	GGNCC	5 cut(s)	138, 1177, 1316, 1383, 1524
AsuC2I	CCSGG	3 cut(s)	821, 839, 1222
AvaI	CYCGRG	1 cut(s)	1247
AvaII	GGWCC	5 cut(s)	138, 1177, 1316, 1383, 1524
AxyI	CCTNAGG	1 cut(s)	1509
BanI	GGYRCC	1 cut(s)	578
BanII	GRGCYC	3 cut(s)	471, 1248, 1656
Bbv12I	GWGCWC	3 cut(s)	471, 1248, 1656
BbvI	GCAGC	7 cut(s)	324, 843, 870, 946, 984, 1708, 1897
BccI	CCATC	4 cut(s)	1204, 1228, 1536, 1683
BceAI	ACGGC	6 cut(s)	445, 624, 844, 961, 985, 1120
BcgI	CGANNNNNNTGC	2 cut(s)	865, 899
BciT130I	CCWGG	1 cut(s)	518
BciVI	GTATCC	1 cut(s)	1487
BclI	TGATCA	3 cut(s)	423, 672, 1068
BcnI	CCSGG	3 cut(s)	821, 839, 1222
BcoDI	GTCTC	3 cut(s)	202, 437, 746
BfaI	CTAG	1 cut(s)	1927
BfmI	CTRYAG	3 cut(s)	1128, 1722, 1911
BfoI	RGCGCY	3 cut(s)	582, 857, 1136
BfuAI	ACCTGC	3 cut(s)	928, 1188, 1904
BfuI	GTATCC	1 cut(s)	1487
BglII	AGATCT	1 cut(s)	1587
BlpI	GCTNAGC	1 cut(s)	1650
Bme1390I	CCNGG	4 cut(s)	518, 821, 839, 1222
Bme18I	GGWCC	5 cut(s)	138, 1177, 1316, 1383, 1524
BmeRI	GACNNNNNGTC	2 cut(s)	1049, 1198
BmeT110I	CYCGRG	1 cut(s)	1247
BmgBI	CACGTC	2 cut(s)	847, 982
BmgT120I	GGNCC	5 cut(s)	138, 1177, 1316, 1383, 1524
BmiI	GGNNCC	5 cut(s)	580, 1230, 1384, 1734, 1765
BmrFI	CCNGG	4 cut(s)	518, 821, 839, 1222
BmsI	GCATC	6 cut(s)	89, 606, 888, 1267, 1476, 1681
BplI	GAGNNNNNCTC	4 cut(s)	380, 412, 458, 490
Bpu1102I	GCTNAGC	1 cut(s)	1650
BpuEI	CTTGAG	2 cut(s)	666, 1915
BpuMI	CCSGG	3 cut(s)	821, 839, 1222
Bsa29I	ATCGAT	1 cut(s)	1572
BsaAI	YACGTR	1 cut(s)	694
BsaBI	GATNNNNATC	4 cut(s)	1067, 1409, 1466, 1592
BsaHI	GRCGYC	4 cut(s)	462, 525, 579, 797
BsaI	GGTCTC	1 cut(s)	437
BsaJI	CCNNGG	7 cut(s)	517, 574, 633, 819, 1221, 1308, 1471
BsaWI	WCCGGW	4 cut(s)	130, 1174, 1185, 1454
BsaXI	ACNNNNNCTCC	2 cut(s)	1001, 1031
Bsc4I	CCNNNNNNNGG	2 cut(s)	202, 1027
Bse118I	RCCGGY	4 cut(s)	437, 491, 1185, 1645
Bse1I	ACTGG	3 cut(s)	141, 1319, 1558
Bse21I	CCTNAGG	1 cut(s)	1509
Bse3DI	GCAATG	1 cut(s)	1737
Bse8I	GATNNNNATC	4 cut(s)	1067, 1409, 1466, 1592
BseAI	TCCGGA	2 cut(s)	1174, 1454
BseBI	CCWGG	1 cut(s)	518
BseCI	ATCGAT	1 cut(s)	1572
BseDI	CCNNGG	7 cut(s)	517, 574, 633, 819, 1221, 1308, 1471
BseJI	GATNNNNATC	4 cut(s)	1067, 1409, 1466, 1592
BseLI	CCNNNNNNNGG	2 cut(s)	202, 1027
BseMI	GCAATG	1 cut(s)	1737
BseMII	CTCAG	5 cut(s)	1392, 1500, 1509, 1641, 1767
BseNI	ACTGG	3 cut(s)	141, 1319, 1558
BseRI	GAGGAG	2 cut(s)	527, 530
BseXI	GCAGC	7 cut(s)	324, 843, 870, 946, 984, 1708, 1897
BseYI	CCCAGC	1 cut(s)	789
BsgI	GTGCAG	1 cut(s)	1166
Bsh1236I	CGCG	2 cut(s)	54, 1050
BshFI	GGCC	2 cut(s)	495, 689
BshNI	GGYRCC	1 cut(s)	578
BshTI	ACCGGT	1 cut(s)	1185
BshVI	ATCGAT	1 cut(s)	1572
BsiHKAI	GWGCWC	3 cut(s)	471, 1248, 1656
BsiHKCI	CYCGRG	1 cut(s)	1247
BslFI	GGGAC	3 cut(s)	399, 886, 1396
BslI	CCNNNNNNNGG	2 cut(s)	202, 1027
BsmAI	GTCTC	3 cut(s)	202, 437, 746
BsmFI	GGGAC	3 cut(s)	399, 886, 1396
BsmI	GAATGC	2 cut(s)	510, 569
BsnI	GGCC	2 cut(s)	495, 689
Bso31I	GGTCTC	1 cut(s)	437
BsoBI	CYCGRG	1 cut(s)	1247
Bsp1286I	GDGCHC	3 cut(s)	471, 1248, 1656
Bsp13I	TCCGGA	2 cut(s)	1174, 1454
Bsp1720I	GCTNAGC	1 cut(s)	1650
BspANI	GGCC	2 cut(s)	495, 689
BspCNI	CTCAG	5 cut(s)	1393, 1501, 1510, 1642, 1768
BspDI	ATCGAT	1 cut(s)	1572
BspEI	TCCGGA	2 cut(s)	1174, 1454
BspFNI	CGCG	2 cut(s)	54, 1050
BspHI	TCATGA	1 cut(s)	1485
BspLI	GGNNCC	5 cut(s)	580, 1230, 1384, 1734, 1765
BspMAI	CTGCAG	2 cut(s)	1726, 1915
BspMI	ACCTGC	3 cut(s)	928, 1188, 1904
BspPI	GGATC	2 cut(s)	979, 1057
BspT107I	GGYRCC	1 cut(s)	578
BspTNI	GGTCTC	1 cut(s)	437
BsrDI	GCAATG	1 cut(s)	1737
BsrFI	RCCGGY	4 cut(s)	437, 491, 1185, 1645
BsrI	ACTGG	3 cut(s)	141, 1319, 1558
BssAI	RCCGGY	4 cut(s)	437, 491, 1185, 1645
BssECI	CCNNGG	7 cut(s)	517, 574, 633, 819, 1221, 1308, 1471
BssNI	GRCGYC	4 cut(s)	462, 525, 579, 797
Bst2UI	CCWGG	1 cut(s)	518
Bst4CI	ACNGT	6 cut(s)	311, 413, 1258, 1387, 1604, 1763
Bst6I	CTCTTC	1 cut(s)	801
BstACI	GRCGYC	4 cut(s)	462, 525, 579, 797
BstBAI	YACGTR	1 cut(s)	694
BstC8I	GCNNGC	5 cut(s)	493, 648, 995, 1378, 1908
BstDEI	CTNAG	5 cut(s)	1401, 1509, 1518, 1650, 1776
BstFNI	CGCG	2 cut(s)	54, 1050
BstH2I	RGCGCY	3 cut(s)	582, 857, 1136
BstHHI	GCGC	4 cut(s)	581, 856, 934, 1135
BstMAI	GTCTC	3 cut(s)	202, 437, 746
BstMWI	GCNNNNNNNGC	7 cut(s)	438, 638, 647, 662, 1047, 1141, 1907
BstNI	CCWGG	1 cut(s)	518
BstSCI	CCNGG	4 cut(s)	516, 819, 837, 1220
BstSFI	CTRYAG	3 cut(s)	1128, 1722, 1911
BstUI	CGCG	2 cut(s)	54, 1050
BstV1I	GCAGC	7 cut(s)	324, 843, 870, 946, 984, 1708, 1897
BstX2I	RGATCY	1 cut(s)	1587
BstXI	CCANNNNNNTGG	1 cut(s)	1336
BstYI	RGATCY	1 cut(s)	1587
Bsu15I	ATCGAT	1 cut(s)	1572
Bsu36I	CCTNAGG	1 cut(s)	1509
BsuI	GTATCC	1 cut(s)	1487
BsuRI	GGCC	2 cut(s)	495, 689
BsuTUI	ATCGAT	1 cut(s)	1572
BtgZI	GCGATG	1 cut(s)	1147
BtrI	CACGTC	2 cut(s)	847, 982
BtsI	GCAGTG	1 cut(s)	651
BtsIMutI	CAGTG	3 cut(s)	651, 1254, 1551
BveI	ACCTGC	3 cut(s)	928, 1188, 1904
Cac8I	GCNNGC	5 cut(s)	493, 648, 995, 1378, 1908
CciI	TCATGA	1 cut(s)	1485
CfoI	GCGC	4 cut(s)	581, 856, 934, 1135
Cfr10I	RCCGGY	4 cut(s)	437, 491, 1185, 1645
Cfr13I	GGNCC	5 cut(s)	138, 1177, 1316, 1383, 1524
ClaI	ATCGAT	1 cut(s)	1572
CseI	GACGC	3 cut(s)	60, 913, 1039
Csp6I	GTAC	3 cut(s)	862, 1189, 1567
CspAI	ACCGGT	1 cut(s)	1185
CspCI	CAANNNNNGTGG	2 cut(s)	1791, 1826
CviAII	CATG	7 cut(s)	407, 532, 739, 1072, 1330, 1486, 1663
CviQI	GTAC	3 cut(s)	862, 1189, 1567
DdeI	CTNAG	5 cut(s)	1401, 1509, 1518, 1650, 1776
DinI	GGCGCC	1 cut(s)	580
DraI	TTTAAA	1 cut(s)	1608
DrdI	GACNNNNNNGTC	1 cut(s)	760
DriI	GACNNNNNGTC	2 cut(s)	1049, 1198
DseDI	GACNNNNNNGTC	1 cut(s)	760
Eam1104I	CTCTTC	1 cut(s)	801
Eam1105I	GACNNNNNGTC	2 cut(s)	1049, 1198
EarI	CTCTTC	1 cut(s)	801
Ecl136II	GAGCTC	3 cut(s)	469, 1246, 1654
Eco24I	GRGCYC	3 cut(s)	471, 1248, 1656
Eco31I	GGTCTC	1 cut(s)	437
Eco32I	GATATC	1 cut(s)	1773
Eco47I	GGWCC	5 cut(s)	138, 1177, 1316, 1383, 1524
Eco53kI	GAGCTC	3 cut(s)	469, 1246, 1654
Eco57I	CTGAAG	1 cut(s)	825
Eco81I	CCTNAGG	1 cut(s)	1509
Eco88I	CYCGRG	1 cut(s)	1247
EcoICRI	GAGCTC	3 cut(s)	469, 1246, 1654
EcoRI	GAATTC	2 cut(s)	317, 557
EcoRII	CCWGG	1 cut(s)	516
EcoRV	GATATC	1 cut(s)	1773
EcoT38I	GRGCYC	3 cut(s)	471, 1248, 1656
EgeI	GGCGCC	1 cut(s)	580
EheI	GGCGCC	1 cut(s)	580
FaeI	CATG	7 cut(s)	410, 535, 742, 1075, 1333, 1489, 1666
FaqI	GGGAC	3 cut(s)	399, 886, 1396
FatI	CATG	7 cut(s)	406, 531, 738, 1071, 1329, 1485, 1662
FauI	CCCGC	2 cut(s)	485, 1373
FbaI	TGATCA	3 cut(s)	423, 672, 1068
FblI	GTMKAC	2 cut(s)	942, 1918
FriOI	GRGCYC	3 cut(s)	471, 1248, 1656
FspBI	CTAG	1 cut(s)	1927
GlaI	GCGC	4 cut(s)	580, 855, 933, 1134
GsaI	CCCAGC	1 cut(s)	793
HaeII	RGCGCY	3 cut(s)	582, 857, 1136
HaeIII	GGCC	2 cut(s)	495, 689
HgaI	GACGC	3 cut(s)	60, 913, 1039
HhaI	GCGC	4 cut(s)	581, 856, 934, 1135
Hin1I	GRCGYC	4 cut(s)	462, 525, 579, 797
Hin1II	CATG	7 cut(s)	410, 535, 742, 1075, 1333, 1489, 1666
Hin6I	GCGC	4 cut(s)	579, 854, 932, 1133
HinP1I	GCGC	4 cut(s)	579, 854, 932, 1133
HincII	GTYRAC	3 cut(s)	18, 943, 1600
HindII	GTYRAC	3 cut(s)	18, 943, 1600
HinfI	GANTC	4 cut(s)	483, 1044, 1171, 1433
Hpy166II	GTNNAC	6 cut(s)	12, 18, 697, 943, 1600, 1919
Hpy188I	TCNGA	9 cut(s)	593, 769, 1055, 1149, 1233, 1289, 1472, 1690, 1777
Hpy188III	TCNNGA	7 cut(s)	314, 355, 388, 1066, 1175, 1455, 1486
Hpy8I	GTNNAC	6 cut(s)	12, 18, 697, 943, 1600, 1919
HpyAV	CCTTC	9 cut(s)	457, 574, 628, 700, 1234, 1448, 1532, 1705, 1878
HpyCH4III	ACNGT	6 cut(s)	311, 413, 1258, 1387, 1604, 1763
HpyCH4IV	ACGT	9 cut(s)	14, 462, 525, 588, 693, 729, 797, 846, 981
HpyCH4V	TGCA	9 cut(s)	781, 1075, 1183, 1346, 1467, 1549, 1724, 1742, 1913
HpyF10VI	GCNNNNNNNGC	7 cut(s)	438, 638, 647, 662, 1047, 1141, 1907
HpyF3I	CTNAG	5 cut(s)	1401, 1509, 1518, 1650, 1776
HpySE526I	ACGT	9 cut(s)	14, 462, 525, 588, 693, 729, 797, 846, 981
Hsp92I	GRCGYC	4 cut(s)	462, 525, 579, 797
Hsp92II	CATG	7 cut(s)	410, 535, 742, 1075, 1333, 1489, 1666
HspAI	GCGC	4 cut(s)	579, 854, 932, 1133
KasI	GGCGCC	1 cut(s)	578
Kpn2I	TCCGGA	2 cut(s)	1174, 1454
KroI	GCCGGC	1 cut(s)	491
KroNI	GCCGGC	1 cut(s)	493
Ksp22I	TGATCA	3 cut(s)	423, 672, 1068
LmnI	GCTCC	5 cut(s)	540, 1055, 1234, 1243, 1870
Lsp1109I	GCAGC	7 cut(s)	324, 843, 870, 946, 984, 1708, 1897
LweI	GCATC	6 cut(s)	89, 606, 888, 1267, 1476, 1681
MaeI	CTAG	1 cut(s)	1927
MaeII	ACGT	9 cut(s)	14, 462, 525, 588, 693, 729, 797, 846, 981
MaeIII	GTNAC	7 cut(s)	44, 55, 143, 311, 521, 919, 1123
MboII	GAAGA	4 cut(s)	818, 1420, 1582, 1834
MflI	RGATCY	1 cut(s)	1587
MhlI	GDGCHC	3 cut(s)	471, 1248, 1656
MluCI	AATT	5 cut(s)	93, 118, 317, 401, 557
MluI	ACGCGT	1 cut(s)	52
Mly113I	GGCGCC	1 cut(s)	579
MlyI	GAGTC	3 cut(s)	492, 1038, 1180
MmeI	TCCRAC	4 cut(s)	571, 684, 1033, 1080
MroI	TCCGGA	2 cut(s)	1174, 1454
MroNI	GCCGGC	1 cut(s)	491
MroXI	GAANNNNTTC	2 cut(s)	617, 1437
MseI	TTAA	5 cut(s)	125, 732, 1607, 1620, 1788
MslI	CAYNNNNRTG	3 cut(s)	519, 743, 1554
MspA1I	CMGCKG	2 cut(s)	793, 1697
MspR9I	CCNGG	4 cut(s)	518, 821, 839, 1222
Mva1269I	GAATGC	2 cut(s)	510, 569
MvaI	CCWGG	1 cut(s)	518
MvnI	CGCG	2 cut(s)	54, 1050
MwoI	GCNNNNNNNGC	7 cut(s)	438, 638, 647, 662, 1047, 1141, 1907
NaeI	GCCGGC	1 cut(s)	493
NarI	GGCGCC	1 cut(s)	579
NciI	CCSGG	3 cut(s)	821, 839, 1222
NgoMIV	GCCGGC	1 cut(s)	491
NlaIII	CATG	7 cut(s)	410, 535, 742, 1075, 1333, 1489, 1666
NlaIV	GGNNCC	5 cut(s)	580, 1230, 1384, 1734, 1765
NmeAIII	GCCGAG	3 cut(s)	486, 555, 658
NmuCI	GTSAC	6 cut(s)	44, 143, 311, 521, 919, 1123
OliI	CACNNNNGTG	2 cut(s)	519, 1554
PaeR7I	CTCGAG	1 cut(s)	1247
PagI	TCATGA	1 cut(s)	1485
PcsI	WCGNNNNNNNCGW	3 cut(s)	872, 884, 1578
PctI	GAATGC	2 cut(s)	510, 569
PdiI	GCCGGC	1 cut(s)	493
PdmI	GAANNNNTTC	2 cut(s)	617, 1437
PfeI	GAWTC	1 cut(s)	1433
PflFI	GACNNNGTC	3 cut(s)	527, 757, 1256
PinAI	ACCGGT	1 cut(s)	1185
PleI	GAGTC	3 cut(s)	491, 1038, 1179
PluTI	GGCGCC	1 cut(s)	582
PpsI	GAGTC	3 cut(s)	491, 1038, 1179
Ppu21I	YACGTR	1 cut(s)	694
Psp124BI	GAGCTC	3 cut(s)	471, 1248, 1656
Psp1406I	AACGTT	1 cut(s)	729
Psp6I	CCWGG	1 cut(s)	516
PspFI	CCCAGC	1 cut(s)	789
PspGI	CCWGG	1 cut(s)	516
PspN4I	GGNNCC	5 cut(s)	580, 1230, 1384, 1734, 1765
PspPI	GGNCC	5 cut(s)	138, 1177, 1316, 1383, 1524
PspXI	VCTCGAGB	1 cut(s)	1247
PsrI	GAACNNNNNNTAC	2 cut(s)	605, 637
PstI	CTGCAG	2 cut(s)	1726, 1915
PsuI	RGATCY	1 cut(s)	1587
PsyI	GACNNNGTC	3 cut(s)	527, 757, 1256
PvuII	CAGCTG	1 cut(s)	793
RsaI	GTAC	3 cut(s)	863, 1190, 1568
RsaNI	GTAC	3 cut(s)	862, 1189, 1567
RseI	CAYNNNNRTG	3 cut(s)	519, 743, 1554
SacI	GAGCTC	3 cut(s)	471, 1248, 1656
SalI	GTCGAC	1 cut(s)	941
SaqAI	TTAA	5 cut(s)	125, 732, 1607, 1620, 1788
Sau96I	GGNCC	5 cut(s)	138, 1177, 1316, 1383, 1524
SchI	GAGTC	3 cut(s)	492, 1038, 1180
ScrFI	CCNGG	4 cut(s)	518, 821, 839, 1222
SduI	GDGCHC	3 cut(s)	471, 1248, 1656
SfaNI	GCATC	6 cut(s)	89, 606, 888, 1267, 1476, 1681
SfcI	CTRYAG	3 cut(s)	1128, 1722, 1911
SfoI	GGCGCC	1 cut(s)	580
Sfr274I	CTCGAG	1 cut(s)	1247
SgrAI	CRCCGGYG	1 cut(s)	437
SinI	GGWCC	5 cut(s)	138, 1177, 1316, 1383, 1524
SlaI	CTCGAG	1 cut(s)	1247
SmiMI	CAYNNNNRTG	3 cut(s)	519, 743, 1554
SmlI	CTYRAG	3 cut(s)	681, 1247, 1894
SmoI	CTYRAG	3 cut(s)	681, 1247, 1894
Sse9I	AATT	5 cut(s)	93, 118, 317, 401, 557
SspDI	GGCGCC	1 cut(s)	578
SspI	AATATT	1 cut(s)	1881
SspMI	CTAG	1 cut(s)	1927
SstI	GAGCTC	3 cut(s)	471, 1248, 1656
StyD4I	CCNGG	4 cut(s)	516, 819, 837, 1220
TaaI	ACNGT	6 cut(s)	311, 413, 1258, 1387, 1604, 1763
TaiI	ACGT	9 cut(s)	17, 465, 528, 591, 696, 732, 800, 849, 984
TaqI	TCGA	9 cut(s)	387, 465, 498, 942, 1202, 1248, 1416, 1572, 1656
TaqII	GACCGA	1 cut(s)	1322
TasI	AATT	5 cut(s)	93, 118, 317, 401, 557
TauI	GCSGC	4 cut(s)	491, 689, 1229, 1697
TfiI	GAWTC	1 cut(s)	1433
Tru1I	TTAA	5 cut(s)	125, 732, 1607, 1620, 1788
Tru9I	TTAA	5 cut(s)	125, 732, 1607, 1620, 1788
TscAI	CASTG	3 cut(s)	658, 1261, 1558
TseFI	GTSAC	6 cut(s)	44, 143, 311, 521, 919, 1123
TseI	GCWGC	7 cut(s)	337, 856, 883, 934, 997, 1721, 1910
Tsp45I	GTSAC	6 cut(s)	44, 143, 311, 521, 919, 1123
TspDTI	ATGAA	7 cut(s)	17, 310, 1421, 1446, 1502, 1582, 1724
TspGWI	ACGGA	2 cut(s)	264, 317
TspRI	CASTG	3 cut(s)	658, 1261, 1558
Tth111I	GACNNNGTC	3 cut(s)	527, 757, 1256
VpaK11BI	GGWCC	5 cut(s)	138, 1177, 1316, 1383, 1524
XapI	RAATTY	3 cut(s)	118, 317, 557
XhoI	CTCGAG	1 cut(s)	1247
XmiI	GTMKAC	2 cut(s)	942, 1918
XmnI	GAANNNNTTC	2 cut(s)	617, 1437
XspI	CTAG	1 cut(s)	1927
ZraI	GACGTC	3 cut(s)	463, 526, 798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.