Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0001962

Physical Location & Seq

Genomic Coordinates Forward (+)

30422004 .. 30429579

Gene Structure 7576 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1257800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGAGCACCATCGCAAAGATGATGAGTTCATTTTCCGGTCCAAACTCCCCGATATTTACATCCCAAACCACCTCCCTCTTCACACCTACTGCTTCGAAAACATCTCTCAATTCATGGACCGCCCCTGCTTGATCAACGGCAACAACGGCGACACCTTCACCTACGCCGACGTCGAGCTCACCTCCCGCAAGGTCGCCTCGGGGCTCCACAAAATCGGCATTCACCAAACCGACGTCATCATGCTCCTCCTCCAAAACTGCCCTGAATTCGTCTTTGCATTTCTCGGCGCCTCCAATATCGGCGCAGTCGTCACCACTGCCAACCCCTTCTACACTCCGGCCGAGATGGCCAAGCAGACAAAAGCATCCAATGCCAAACTCATCATAACGCAGTCGGCTTACGTGGACAAGGTGAAGGACTTCGCACTTAAAAACGACGTCGAGATCATGGTCGTCGACAGCGCGGAAACTGAGGAAGACGGTAATACTTATCGTCACTTCTCGGAGATGACTTCGGCGGACGAGAATGACATCCCGGCGGTGAAAATAAACCCCGAAGACGTCGTTGCGCTGCCGTATTCTTCTGGGACGACGGGGCTACCTAAAGGAGTTATGCTGACGCACAAAGGGTTGGTGACGAGCGTGGCGCAACAGGTGGACGGAGAGAATCCGAATTTGTATTTCCACAGTGAGGACGTGATCCTCTGCGTGCTGCCCTTGTTCCATATCTACTCCCTCAATTCAGTGTTTCTCTGCGGACTCAGAGTTGGGGCGGCGATACTGATCATGCAGAAGTTTGAGATCACCAAGTTGTTGGAGCTGGTGGAGAAGTACAAGGTGACGATTGCGCCTTTTGTACCTCCGATCGTTTTGAGTATTGCCAAAAGCCCCGACTTAGACCGGTACGACTTGTCATCGATAAGGATGGTGATGTCCGGTGCGGCGCCGTTGGGGAAGGAGCTTGAGGATACAGTGAGGGCTAAGTTACCTAATGCCAAACTTGGACAGGGGTATGGAATGACAGAGGCTGGACCTGTGCTGTCAATGTGCTTAGCATTTGCAAAGGAACCATTTGAGATAAAATCAGGTGCGTGCGGGACTGTTGTAAGAAATGCAGAGATGAAAATTGTTGACCCTGATACGGGTGCTTCGCTTCCGCGAAATCAAGCTGGAGAGATTTGCATCAGAGGTAGCCAAATCATGAAAGGTTATCTTAATGATCCTGAAGCAACGGAGAGAACCGTAGACAAACAGGGATGGTTGCACACAGGTGATATAGGGTACATCGACGGTGATGACGAGCTCTTCATCGTCGACCGATTAAAGGAACTCATCAAATACAAAGGGTTCCAAGTGGCTCCGGCTGAGCTTGAAGCCATGCTGATTGCCCATCCCAACATCTCCGACGCTGCTGTTGTACCTATGAAGGATGAAGCTGCAGGTGAAATTCCTGTTGCATTTGTTGTGAGATCGAACAGTTCCAAGATCTCCGAAGATGACATCAAACAATACATCTCAAAACAGGTGGTCTTTTATAAGAGAATAGGTCGGGTTTTCTTCATAGACAAAATACCCAAGGCTCCTTCTGGCAAAATCTTGAGAAAAGACTTGAGAGCAAAGCTGGCTGCAGGCCTACCCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

548

Amino Acids

60.26

Weight (kDa)

5.57

Isoelectric Point (pI)

31.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	33 - 405	2e-100	AMP-binding enzyme
AMP-binding_C	PF13193	456 - 531	8.2e-17	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51680 AT1G51680 AT1G51680 AT3G21240 AT3G21240 AT3G21240
fragaria_vesca	FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940
malus_domestica	MD13G1257800.v1.1 MD17G1229400.v1.1
prunus_persica	Prupe.1G087900_v2.0.a1 Prupe.3G107300_v2.0.a1
pyrus_communis	pycom13g22250 pycom17g23190
rosa_chinensis	RchiOBHm_Chr2g0131501 RchiOBHm_Chr4g0402711 RchiOBHm_Chr5g0057551
rosa_laevigata	RLG00000009052 RLG00000019189
rosa_multiflora	Rmu_co7959539.1_g000001 Rmu_sc0000329.1_g000003 Rmu_sc0002230.1_g000020 Rmu_sc0002451.1_g000001 Rmu_sc0002808.1_g000009
rosa_roxburghii	Rroxscaffold_2G00112820 Rroxscaffold_5G00347470
rosa_rugosa	Rorug02G0297600 Rorug04G0037900
rosa_samantha	Rh2AG350900 Rh2BG357400 Rh2CG336600 Rh2DG375300 Rh4AG115500 Rh4CG122400 Rh4DG108000
rosa_wichuraiana	Rw2G028470 Rw4G009230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1536
AarI	CACCTGC	1 cut(s)	1430
AatII	GACGTC	4 cut(s)	174, 237, 441, 564
Acc36I	ACCTGC	1 cut(s)	1430
AccB1I	GGYRCC	2 cut(s)	287, 943
AccI	GTMKAC	3 cut(s)	456, 1245, 1314
AccII	CGCG	2 cut(s)	464, 1159
AclWI	GGATC	2 cut(s)	694, 1214
AcoI	YGGCCR	2 cut(s)	339, 348
AcsI	RAATTY	3 cut(s)	266, 673, 1446
AcuI	CTGAAG	1 cut(s)	1245
AcyI	GRCGYC	6 cut(s)	171, 234, 288, 438, 561, 944
AfaI	GTAC	5 cut(s)	833, 858, 905, 1283, 1419
AfiI	CCNNNNNNNGG	4 cut(s)	691, 1141, 1142, 1324
AgeI	ACCGGT	1 cut(s)	900
AgsI	TTSAA	1 cut(s)	1373
AjiI	CACGTC	1 cut(s)	697
AleI	CACNNNNGTG	1 cut(s)	1269
AluBI	AGCT	8 cut(s)	178, 820, 961, 1169, 1303, 1369, 1436, 1621
AluI	AGCT	8 cut(s)	178, 820, 961, 1169, 1303, 1369, 1436, 1621
Alw21I	GWGCWC	3 cut(s)	9, 180, 1305
AlwI	GGATC	2 cut(s)	694, 1214
AlwNI	CAGNNNCTG	1 cut(s)	1028
Ama87I	CYCGRG	1 cut(s)	199
AoxI	GGCC	3 cut(s)	339, 348, 1630
ApeKI	GCWGC	5 cut(s)	571, 712, 1409, 1436, 1625
ApoI	RAATTY	3 cut(s)	266, 673, 1446
AsiGI	ACCGGT	1 cut(s)	900
Asp700I	GAANNNNTTC	1 cut(s)	419
AspLEI	GCGC	7 cut(s)	290, 305, 464, 571, 649, 850, 946
AspS9I	GGNCC	3 cut(s)	39, 118, 1031
AsuC2I	CCSGG	1 cut(s)	536
AsuII	TTCGAA	1 cut(s)	96
AvaI	CYCGRG	1 cut(s)	199
AvaII	GGWCC	3 cut(s)	39, 118, 1031
BalI	TGGCCA	1 cut(s)	350
BanI	GGYRCC	2 cut(s)	287, 943
BanII	GRGCYC	3 cut(s)	180, 207, 1305
BbsI	GAAGAC	2 cut(s)	483, 564
Bbv12I	GWGCWC	3 cut(s)	9, 180, 1305
BbvI	GCAGC	5 cut(s)	558, 699, 1396, 1423, 1612
BccI	CCATC	5 cut(s)	18, 340, 919, 1251, 1398
BceAI	ACGGC	4 cut(s)	154, 163, 559, 931
BciVI	GTATCC	1 cut(s)	961
BclI	TGATCA	2 cut(s)	132, 783
BcnI	CCSGG	1 cut(s)	536
BfmI	CTRYAG	2 cut(s)	1437, 1626
BfoI	RGCGCY	2 cut(s)	291, 947
BfuAI	ACCTGC	1 cut(s)	1430
BfuI	GTATCC	1 cut(s)	961
BglI	GCCNNNNNGGC	1 cut(s)	347
BglII	AGATCT	1 cut(s)	1485
BisI	GCNGC	7 cut(s)	572, 713, 774, 942, 1410, 1437, 1626
BlpI	GCTNAGC	2 cut(s)	1051, 1365
BlsI	GCNGC	7 cut(s)	573, 714, 775, 943, 1411, 1438, 1627
Bme1390I	CCNGG	1 cut(s)	536
Bme18I	GGWCC	3 cut(s)	39, 118, 1031
BmeT110I	CYCGRG	1 cut(s)	199
BmgBI	CACGTC	1 cut(s)	697
BmgT120I	GGNCC	3 cut(s)	39, 118, 1031
BmiI	GGNNCC	7 cut(s)	206, 289, 945, 1068, 1349, 1359, 1581
BmrFI	CCNGG	1 cut(s)	536
BmsI	GCATC	2 cut(s)	374, 1191
BpiI	GAAGAC	2 cut(s)	483, 564
BplI	GAGNNNNNCTC	2 cut(s)	167, 199
BpmI	CTGGAG	1 cut(s)	1191
Bpu1102I	GCTNAGC	2 cut(s)	1051, 1365
Bpu14I	TTCGAA	1 cut(s)	96
BpuEI	CTTGAG	3 cut(s)	983, 1618, 1630
BpuMI	CCSGG	1 cut(s)	536
Bsa29I	ATCGAT	1 cut(s)	917
BsaAI	YACGTR	1 cut(s)	403
BsaBI	GATNNNNATC	2 cut(s)	782, 1181
BsaHI	GRCGYC	6 cut(s)	171, 234, 288, 438, 561, 944
BsaJI	CCNNGG	2 cut(s)	198, 1575
BsaWI	WCCGGW	3 cut(s)	36, 900, 935
Bsc4I	CCNNNNNNNGG	4 cut(s)	691, 1141, 1142, 1324
Bse118I	RCCGGY	1 cut(s)	900
Bse8I	GATNNNNATC	2 cut(s)	782, 1181
BseCI	ATCGAT	1 cut(s)	917
BseDI	CCNNGG	2 cut(s)	198, 1575
BseGI	GGATG	7 cut(s)	60, 365, 531, 930, 1262, 1390, 1435
BseJI	GATNNNNATC	2 cut(s)	782, 1181
BseLI	CCNNNNNNNGG	4 cut(s)	691, 1141, 1142, 1324
BseMII	CTCAG	3 cut(s)	462, 775, 1356
BseRI	GAGGAG	2 cut(s)	236, 239
BseX3I	CGGCCG	1 cut(s)	339
BseXI	GCAGC	5 cut(s)	558, 699, 1396, 1423, 1612
Bsh1236I	CGCG	2 cut(s)	464, 1159
Bsh1285I	CGRYCG	3 cut(s)	342, 867, 1318
BshFI	GGCC	3 cut(s)	341, 350, 1632
BshNI	GGYRCC	2 cut(s)	287, 943
BshTI	ACCGGT	1 cut(s)	900
BshVI	ATCGAT	1 cut(s)	917
BsiEI	CGRYCG	3 cut(s)	342, 867, 1318
BsiHKAI	GWGCWC	3 cut(s)	9, 180, 1305
BsiHKCI	CYCGRG	1 cut(s)	199
BsiSI	CCGG	6 cut(s)	37, 338, 536, 901, 936, 1361
BslFI	GGGAC	2 cut(s)	601, 1111
BslI	CCNNNNNNNGG	4 cut(s)	691, 1141, 1142, 1324
BsmFI	GGGAC	2 cut(s)	601, 1111
BsmI	GAATGC	1 cut(s)	219
BsnI	GGCC	3 cut(s)	341, 350, 1632
BsoBI	CYCGRG	1 cut(s)	199
Bsp119I	TTCGAA	1 cut(s)	96
Bsp1286I	GDGCHC	4 cut(s)	9, 180, 207, 1305
Bsp143I	GATC	9 cut(s)	132, 444, 699, 783, 801, 864, 1219, 1469, 1485
Bsp1720I	GCTNAGC	2 cut(s)	1051, 1365
BspANI	GGCC	3 cut(s)	341, 350, 1632
BspCNI	CTCAG	3 cut(s)	463, 774, 1357
BspDI	ATCGAT	1 cut(s)	917
BspFNI	CGCG	2 cut(s)	464, 1159
BspHI	TCATGA	1 cut(s)	1200
BspLI	GGNNCC	7 cut(s)	206, 289, 945, 1068, 1349, 1359, 1581
BspMAI	CTGCAG	2 cut(s)	1441, 1630
BspMI	ACCTGC	1 cut(s)	1430
BspPI	GGATC	2 cut(s)	694, 1214
BspQI	GCTCTTC	1 cut(s)	1310
BspT104I	TTCGAA	1 cut(s)	96
BspT107I	GGYRCC	2 cut(s)	287, 943
BsrFI	RCCGGY	1 cut(s)	900
BssAI	RCCGGY	1 cut(s)	900
BssECI	CCNNGG	2 cut(s)	198, 1575
BssMI	GATC	9 cut(s)	132, 444, 699, 783, 801, 864, 1219, 1469, 1485
BssNI	GRCGYC	6 cut(s)	171, 234, 288, 438, 561, 944
BssT1I	CCWWGG	1 cut(s)	1575
Bst4CI	ACNGT	7 cut(s)	482, 689, 973, 1102, 1243, 1292, 1478
Bst6I	CTCTTC	2 cut(s)	84, 1310
BstACI	GRCGYC	6 cut(s)	171, 234, 288, 438, 561, 944
BstAPI	GCANNNNNTGC	1 cut(s)	371
BstBAI	YACGTR	1 cut(s)	403
BstBI	TTCGAA	1 cut(s)	96
BstC8I	GCNNGC	4 cut(s)	710, 1093, 1623, 1630
BstDEI	CTNAG	6 cut(s)	471, 761, 895, 981, 1051, 1365
BstF5I	GGATG	7 cut(s)	60, 365, 531, 930, 1262, 1390, 1435
BstFNI	CGCG	2 cut(s)	464, 1159
BstH2I	RGCGCY	2 cut(s)	291, 947
BstHHI	GCGC	7 cut(s)	290, 305, 464, 571, 649, 850, 946
BstKTI	GATC	9 cut(s)	135, 447, 702, 786, 804, 867, 1222, 1472, 1488
BstMBI	GATC	9 cut(s)	132, 444, 699, 783, 801, 864, 1219, 1469, 1485
BstMCI	CGRYCG	3 cut(s)	342, 867, 1318
BstMWI	GCNNNNNNNGC	4 cut(s)	147, 347, 371, 1622
BstSCI	CCNGG	1 cut(s)	534
BstSFI	CTRYAG	2 cut(s)	1437, 1626
BstUI	CGCG	2 cut(s)	464, 1159
BstV1I	GCAGC	5 cut(s)	558, 699, 1396, 1423, 1612
BstV2I	GAAGAC	2 cut(s)	483, 564
BstX2I	RGATCY	1 cut(s)	1485
BstXI	CCANNNNNNTGG	1 cut(s)	814
BstYI	RGATCY	1 cut(s)	1485
BstZI	CGGCCG	1 cut(s)	339
Bsu15I	ATCGAT	1 cut(s)	917
BsuI	GTATCC	1 cut(s)	961
BsuRI	GGCC	3 cut(s)	341, 350, 1632
BsuTUI	ATCGAT	1 cut(s)	917
BtrI	CACGTC	1 cut(s)	697
BtsCI	GGATG	7 cut(s)	60, 365, 531, 930, 1262, 1390, 1435
BtsI	GCAGTG	1 cut(s)	315
BtsIMutI	CAGTG	4 cut(s)	315, 694, 750, 978
BveI	ACCTGC	1 cut(s)	1430
Cac8I	GCNNGC	4 cut(s)	710, 1093, 1623, 1630
CaiI	CAGNNNCTG	1 cut(s)	1028
CciI	TCATGA	1 cut(s)	1200
CfoI	GCGC	7 cut(s)	290, 305, 464, 571, 649, 850, 946
Cfr10I	RCCGGY	1 cut(s)	900
Cfr13I	GGNCC	3 cut(s)	39, 118, 1031
ClaI	ATCGAT	1 cut(s)	917
CseI	GACGC	2 cut(s)	628, 1415
Csp6I	GTAC	5 cut(s)	832, 857, 904, 1282, 1418
CspAI	ACCGGT	1 cut(s)	900
CspCI	CAANNNNNGTGG	2 cut(s)	1506, 1541
CviAII	CATG	6 cut(s)	115, 241, 448, 787, 1201, 1378
CviQI	GTAC	5 cut(s)	832, 857, 904, 1282, 1418
DdeI	CTNAG	6 cut(s)	471, 761, 895, 981, 1051, 1365
DinI	GGCGCC	2 cut(s)	289, 945
DpnI	GATC	9 cut(s)	134, 446, 701, 785, 803, 866, 1221, 1471, 1487
DpnII	GATC	9 cut(s)	132, 444, 699, 783, 801, 864, 1219, 1469, 1485
EaeI	YGGCCR	2 cut(s)	339, 348
EagI	CGGCCG	1 cut(s)	339
Eam1104I	CTCTTC	2 cut(s)	84, 1310
EarI	CTCTTC	2 cut(s)	84, 1310
EciI	GGCGGA	1 cut(s)	533
Ecl136II	GAGCTC	2 cut(s)	178, 1303
EclXI	CGGCCG	1 cut(s)	339
Eco130I	CCWWGG	1 cut(s)	1575
Eco147I	AGGCCT	1 cut(s)	1632
Eco24I	GRGCYC	3 cut(s)	180, 207, 1305
Eco47I	GGWCC	3 cut(s)	39, 118, 1031
Eco52I	CGGCCG	1 cut(s)	339
Eco53kI	GAGCTC	2 cut(s)	178, 1303
Eco57I	CTGAAG	1 cut(s)	1245
Eco88I	CYCGRG	1 cut(s)	199
EcoICRI	GAGCTC	2 cut(s)	178, 1303
EcoRI	GAATTC	1 cut(s)	266
EcoT14I	CCWWGG	1 cut(s)	1575
EcoT38I	GRGCYC	3 cut(s)	180, 207, 1305
EgeI	GGCGCC	2 cut(s)	289, 945
EheI	GGCGCC	2 cut(s)	289, 945
ErhI	CCWWGG	1 cut(s)	1575
FaeI	CATG	6 cut(s)	118, 244, 451, 790, 1204, 1381
FalI	AAGNNNNNCTT	2 cut(s)	1197, 1229
FaqI	GGGAC	2 cut(s)	601, 1111
FatI	CATG	6 cut(s)	114, 240, 447, 786, 1200, 1377
FauI	CCCGC	2 cut(s)	194, 1088
FbaI	TGATCA	2 cut(s)	132, 783
FblI	GTMKAC	3 cut(s)	456, 1245, 1314
Fnu4HI	GCNGC	7 cut(s)	572, 713, 774, 942, 1410, 1437, 1626
FokI	GGATG	7 cut(s)	47, 352, 518, 937, 1269, 1377, 1442
FriOI	GRGCYC	3 cut(s)	180, 207, 1305
Fsp4HI	GCNGC	7 cut(s)	572, 713, 774, 942, 1410, 1437, 1626
GlaI	GCGC	7 cut(s)	289, 304, 463, 570, 648, 849, 945
GluI	GCNGC	7 cut(s)	572, 713, 774, 942, 1410, 1437, 1626
GsuI	CTGGAG	1 cut(s)	1191
HaeII	RGCGCY	2 cut(s)	291, 947
HaeIII	GGCC	3 cut(s)	341, 350, 1632
HapII	CCGG	6 cut(s)	37, 338, 536, 901, 936, 1361
HgaI	GACGC	2 cut(s)	628, 1415
HhaI	GCGC	7 cut(s)	290, 305, 464, 571, 649, 850, 946
Hin1I	GRCGYC	6 cut(s)	171, 234, 288, 438, 561, 944
Hin1II	CATG	6 cut(s)	118, 244, 451, 790, 1204, 1381
Hin6I	GCGC	7 cut(s)	288, 303, 462, 569, 647, 848, 944
HinP1I	GCGC	7 cut(s)	288, 303, 462, 569, 647, 848, 944
HincII	GTYRAC	3 cut(s)	457, 1132, 1315
HindII	GTYRAC	3 cut(s)	457, 1132, 1315
HinfI	GANTC	2 cut(s)	667, 759
HpaII	CCGG	6 cut(s)	37, 338, 536, 901, 936, 1361
Hpy166II	GTNNAC	6 cut(s)	406, 457, 658, 1132, 1246, 1315
Hpy188I	TCNGA	7 cut(s)	505, 672, 764, 864, 1187, 1405, 1492
Hpy188III	TCNNGA	4 cut(s)	442, 1201, 1223, 1597
Hpy8I	GTNNAC	6 cut(s)	406, 457, 658, 1132, 1246, 1315
HpyAV	CCTTC	6 cut(s)	166, 337, 409, 949, 1420, 1593
HpyCH4III	ACNGT	7 cut(s)	482, 689, 973, 1102, 1243, 1292, 1478
HpyCH4IV	ACGT	6 cut(s)	171, 234, 402, 438, 561, 696
HpyCH4V	TGCA	9 cut(s)	278, 790, 1061, 1115, 1182, 1264, 1439, 1457, 1628
HpyF10VI	GCNNNNNNNGC	4 cut(s)	147, 347, 371, 1622
HpyF3I	CTNAG	6 cut(s)	471, 761, 895, 981, 1051, 1365
HpySE526I	ACGT	6 cut(s)	171, 234, 402, 438, 561, 696
Hsp92I	GRCGYC	6 cut(s)	171, 234, 288, 438, 561, 944
Hsp92II	CATG	6 cut(s)	118, 244, 451, 790, 1204, 1381
HspAI	GCGC	7 cut(s)	288, 303, 462, 569, 647, 848, 944
KasI	GGCGCC	2 cut(s)	287, 943
Ksp22I	TGATCA	2 cut(s)	132, 783
Kzo9I	GATC	9 cut(s)	132, 444, 699, 783, 801, 864, 1219, 1469, 1485
LguI	GCTCTTC	1 cut(s)	1310
LmnI	GCTCC	7 cut(s)	4, 210, 249, 817, 958, 1363, 1585
Lsp1109I	GCAGC	5 cut(s)	558, 699, 1396, 1423, 1612
LweI	GCATC	2 cut(s)	374, 1191
MaeII	ACGT	6 cut(s)	171, 234, 402, 438, 561, 696
MaeIII	GTNAC	5 cut(s)	310, 494, 634, 838, 984
MalI	GATC	9 cut(s)	134, 446, 701, 785, 803, 866, 1221, 1471, 1487
MboI	GATC	9 cut(s)	132, 444, 699, 783, 801, 864, 1219, 1469, 1485
MboII	GAAGA	7 cut(s)	71, 488, 569, 573, 1297, 1505, 1549
MflI	RGATCY	1 cut(s)	1485
MhlI	GDGCHC	4 cut(s)	9, 180, 207, 1305
MlsI	TGGCCA	1 cut(s)	350
MluCI	AATT	7 cut(s)	110, 266, 673, 739, 1125, 1446, 1639
MluNI	TGGCCA	1 cut(s)	350
Mly113I	GGCGCC	2 cut(s)	288, 944
MlyI	GAGTC	1 cut(s)	753
MmeI	TCCRAC	2 cut(s)	795, 1428
Mox20I	TGGCCA	1 cut(s)	350
MroXI	GAANNNNTTC	1 cut(s)	419
MscI	TGGCCA	1 cut(s)	350
MseI	TTAA	3 cut(s)	429, 1215, 1322
MslI	CAYNNNNRTG	1 cut(s)	1269
Msp20I	TGGCCA	1 cut(s)	350
MspI	CCGG	6 cut(s)	37, 338, 536, 901, 936, 1361
MspR9I	CCNGG	1 cut(s)	536
Mva1269I	GAATGC	1 cut(s)	219
MvnI	CGCG	2 cut(s)	464, 1159
MwoI	GCNNNNNNNGC	4 cut(s)	147, 347, 371, 1622
NarI	GGCGCC	2 cut(s)	288, 944
NciI	CCSGG	1 cut(s)	536
NdeII	GATC	9 cut(s)	132, 444, 699, 783, 801, 864, 1219, 1469, 1485
NlaIII	CATG	6 cut(s)	118, 244, 451, 790, 1204, 1381
NlaIV	GGNNCC	7 cut(s)	206, 289, 945, 1068, 1349, 1359, 1581
NmeAIII	GCCGAG	2 cut(s)	264, 367
NmuCI	GTSAC	4 cut(s)	310, 494, 634, 838
NspV	TTCGAA	1 cut(s)	96
OliI	CACNNNNGTG	1 cut(s)	1269
PagI	TCATGA	1 cut(s)	1200
PaqCI	CACCTGC	1 cut(s)	1430
PceI	AGGCCT	1 cut(s)	1632
PciSI	GCTCTTC	1 cut(s)	1310
PcsI	WCGNNNNNNNCGW	3 cut(s)	171, 306, 1296
PctI	GAATGC	1 cut(s)	219
PdmI	GAANNNNTTC	1 cut(s)	419
PfeI	GAWTC	1 cut(s)	667
PinAI	ACCGGT	1 cut(s)	900
PkrI	GCNGC	7 cut(s)	573, 714, 775, 943, 1411, 1438, 1627
Ple19I	CGATCG	1 cut(s)	867
PleI	GAGTC	1 cut(s)	753
PluTI	GGCGCC	2 cut(s)	291, 947
PpsI	GAGTC	1 cut(s)	753
Ppu21I	YACGTR	1 cut(s)	403
PsiI	TTATAA	1 cut(s)	1536
Psp124BI	GAGCTC	2 cut(s)	180, 1305
PspN4I	GGNNCC	7 cut(s)	206, 289, 945, 1068, 1349, 1359, 1581
PspPI	GGNCC	3 cut(s)	39, 118, 1031
PstI	CTGCAG	2 cut(s)	1441, 1630
PstNI	CAGNNNCTG	1 cut(s)	1028
PsuI	RGATCY	1 cut(s)	1485
PvuI	CGATCG	1 cut(s)	867
RsaI	GTAC	5 cut(s)	833, 858, 905, 1283, 1419
RsaNI	GTAC	5 cut(s)	832, 857, 904, 1282, 1418
RseI	CAYNNNNRTG	1 cut(s)	1269
SacI	GAGCTC	2 cut(s)	180, 1305
SalI	GTCGAC	2 cut(s)	455, 1313
SapI	GCTCTTC	1 cut(s)	1310
SaqAI	TTAA	3 cut(s)	429, 1215, 1322
SatI	GCNGC	7 cut(s)	572, 713, 774, 942, 1410, 1437, 1626
Sau3AI	GATC	9 cut(s)	132, 444, 699, 783, 801, 864, 1219, 1469, 1485
Sau96I	GGNCC	3 cut(s)	39, 118, 1031
SchI	GAGTC	1 cut(s)	753
ScrFI	CCNGG	1 cut(s)	536
SduI	GDGCHC	4 cut(s)	9, 180, 207, 1305
SfaNI	GCATC	2 cut(s)	374, 1191
SfcI	CTRYAG	2 cut(s)	1437, 1626
SfiI	GGCCNNNNNGGCC	1 cut(s)	347
SfoI	GGCGCC	2 cut(s)	289, 945
SfuI	TTCGAA	1 cut(s)	96
SinI	GGWCC	3 cut(s)	39, 118, 1031
SmiMI	CAYNNNNRTG	1 cut(s)	1269
SmlI	CTYRAG	3 cut(s)	962, 1597, 1609
SmoI	CTYRAG	3 cut(s)	962, 1597, 1609
Sse9I	AATT	7 cut(s)	110, 266, 673, 739, 1125, 1446, 1639
SseBI	AGGCCT	1 cut(s)	1632
SspDI	GGCGCC	2 cut(s)	287, 943
SstI	GAGCTC	2 cut(s)	180, 1305
StuI	AGGCCT	1 cut(s)	1632
StyD4I	CCNGG	1 cut(s)	534
StyI	CCWWGG	1 cut(s)	1575
TaaI	ACNGT	7 cut(s)	482, 689, 973, 1102, 1243, 1292, 1478
TaiI	ACGT	6 cut(s)	174, 237, 405, 441, 564, 699
TaqI	TCGA	8 cut(s)	96, 174, 441, 456, 917, 1287, 1314, 1472
TaqII	GACCGA	1 cut(s)	1332
TasI	AATT	7 cut(s)	110, 266, 673, 739, 1125, 1446, 1639
TatI	WGTACW	1 cut(s)	831
TauI	GCSGC	2 cut(s)	776, 944
TfiI	GAWTC	1 cut(s)	667
Tru1I	TTAA	3 cut(s)	429, 1215, 1322
Tru9I	TTAA	3 cut(s)	429, 1215, 1322
TscAI	CASTG	4 cut(s)	322, 694, 750, 978
TseFI	GTSAC	4 cut(s)	310, 494, 634, 838
TseI	GCWGC	5 cut(s)	571, 712, 1409, 1436, 1625
Tsp45I	GTSAC	4 cut(s)	310, 494, 634, 838
TspDTI	ATGAA	8 cut(s)	19, 103, 1136, 1217, 1297, 1439, 1446, 1549
TspGWI	ACGGA	2 cut(s)	675, 1247
TspRI	CASTG	4 cut(s)	322, 694, 750, 978
VpaK11BI	GGWCC	3 cut(s)	39, 118, 1031
XapI	RAATTY	3 cut(s)	266, 673, 1446
XmiI	GTMKAC	3 cut(s)	456, 1245, 1314
XmnI	GAANNNNTTC	1 cut(s)	419
ZraI	GACGTC	4 cut(s)	172, 235, 439, 562

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.