Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001962

Physical Location & Seq

Genomic Coordinates Forward (+)

21358984 .. 21363802

Gene Structure 4819 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ37448

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGAGAACAAACAAGACAGTCACGAATTCATTTTCCGTTCAAAGCTGCCGGACATTTACATCCCGAACCACCTCCCTCTCCACACCTACTGCTTCGAGAACATCTCCCAATTCCATGACCGTCCCTGCCTGATCAACGGCAACACCGGCGAGACCTTCACCTATGCCGACGTCGAGCTCACCTCCCGCAGAGTCGCCGCCGGTCTCGACAAGCTCGGCATTCATCAGGGCGACGTCGTCATGCTCCTCCTCCAAAACTGCCCTGAATTCGCCTTCGCATTCCTCGGCGCCTCTTACGTCGGAGGCATCATCACTACGGCGAACCCCTTCTACACTCCTGCCGAGGTCGCCAAGCAAGCCACTGCCTCCAACGCCAAGCTGATCATAACTCAAGCGGCCTACGTGGACAAGGTGAAGGACTTTGCCAAACTCAACAACGTTAGACTCATGTGCGTGGACGAGACTTCGTCGTCATCATCAGAGGATGTGTTGCATTTCTCCCAGCTGTCGTCGGCAGACGAGAGCGAAACCCCGGCGGTGAAAATCAACCCGGACGACGTGGTGGCGCTGCCTTACTCGTCGGGGACGACGGGGCTGCCGAAAGGGGTGATGCTGACGCACAAGGGGTTGGTGACGAGCGTGGCGCAGCAGGTCGACGGCGAAAACCCAAACCTCTACTTTCACAAGGAGGACGTGATCCTCTGCGTGCTGCCGTTGTTCCACATCTACTCCCTCAACTCGGTGTTCCTCTGCGGACTCCGCGTCGGAGCGACGATCCTGATCATGCAGAAGTTTGAGATCAACAAGTTGTTGGAGTTGGTGGAAAAGGAAAAGGTGACTATAGCGCCGTTTGTGCCTCCGATTGTTTTGAACATCGCCAAGAGTCCGGACCTGCACCGGTACGACTTGTCGTCGATTAGGATGGTGATGTCCGGCGCGGCTCCGATGGGGAAGGAGCTCGAGGACACTGTCAGGGCTAAACTGCCCGATGCCAAACTCGGACAGGGTTATGGGATGACCGAGGCTGGACCAGTTCTATCCATGTGCTTGGCATTTGCAAAAGAACCCTACGAGATAAAATCAGGTGCGTGCGGGACCGTCGTAAGAAATGCTGAGATGAAGATCATCGACCCCGACACCAATGAATCCCTTCCCCGAAACCAATCCGGAGAGATTTGCATCCGAGGTAGCCAAATCATGAAAGGATACCTGAATGACCCTGAGGCGACTGAGAGGACCATAGACAAAGAAGGATGGTTGCACACAGGTGATATAGGGTACATCGATGACGACGATGAGATCTTCATCGTTGACCGTTTAAAAGAACTCATTAAATACAAAGGTTTCCAAGTCGCACCGGCTGAGCTCGAAGCCATGTTGATCTCCCATCCCAACCTCTCCGATGCCGCTGTTGTGCCGATGAAGGATGAGGCTGCAGGAGAGGTTCCCATTGCATTTGTTGTAAGATCAAACGGTTCCAAGATATCTGAGGATGACATTAAGCAATACATATCAAAACAGGTGGTGTTCTACAAGAGAATAAGTAGGGTTTTCTTCACAGACAAAATCCCAAAAGCTCCTTCTGGCAAAATATTGAGGAAAGACTTGAGAGCAAGGCTGGCTGCAGGTCTACCCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

546

Amino Acids

60.15

Weight (kDa)

5.5

Isoelectric Point (pI)

33.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	33 - 404	4.3e-101	AMP-binding enzyme
AMP-binding_C	PF13193	455 - 530	1.4e-16	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51680 AT1G51680 AT1G51680 AT3G21240 AT3G21240 AT3G21240
fragaria_vesca	FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940
malus_domestica	MD13G1257800.v1.1 MD17G1229400.v1.1
prunus_persica	Prupe.1G087900_v2.0.a1 Prupe.3G107300_v2.0.a1
pyrus_communis	pycom13g22250 pycom17g23190
rosa_chinensis	RchiOBHm_Chr2g0131501 RchiOBHm_Chr4g0402711 RchiOBHm_Chr5g0057551
rosa_laevigata	RLG00000009052 RLG00000019189
rosa_multiflora	Rmu_co7959539.1_g000001 Rmu_sc0000329.1_g000003 Rmu_sc0002230.1_g000020 Rmu_sc0002451.1_g000001 Rmu_sc0002808.1_g000009
rosa_roxburghii	Rroxscaffold_2G00112820 Rroxscaffold_5G00347470
rosa_rugosa	Rorug02G0297600 Rorug04G0037900
rosa_samantha	Rh2AG350900 Rh2BG357400 Rh2CG336600 Rh2DG375300 Rh4AG115500 Rh4CG122400 Rh4DG108000
rosa_wichuraiana	Rw2G028470 Rw4G009230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	469
AatII	GACGTC	2 cut(s)	174, 237
Acc36I	ACCTGC	3 cut(s)	640, 900, 1616
AccB1I	GGYRCC	1 cut(s)	287
AccI	GTMKAC	2 cut(s)	654, 1630
AccII	CGCG	2 cut(s)	762, 938
AccIII	TCCGGA	2 cut(s)	886, 1166
AciI	CCGC	9 cut(s)	187, 198, 395, 536, 753, 760, 938, 1092, 1407
AclI	AACGTT	1 cut(s)	438
AclWI	GGATC	2 cut(s)	691, 769
AcsI	RAATTY	2 cut(s)	26, 266
AcyI	GRCGYC	3 cut(s)	171, 234, 288
AfaI	GTAC	2 cut(s)	902, 1280
AfiI	CCNNNNNNNGG	1 cut(s)	739
AgeI	ACCGGT	1 cut(s)	897
AgsI	TTSAA	2 cut(s)	42, 871
AhdI	GACNNNNNGTC	2 cut(s)	761, 910
AjiI	CACGTC	2 cut(s)	559, 694
AjuI	GAANNNNNNNTTGG	2 cut(s)	1564, 1596
AleI	CACNNNNGTG	1 cut(s)	1266
AluBI	AGCT	8 cut(s)	46, 178, 214, 379, 505, 958, 1366, 1577
AluI	AGCT	8 cut(s)	46, 178, 214, 379, 505, 958, 1366, 1577
Alw21I	GWGCWC	3 cut(s)	180, 960, 1368
Alw26I	GTCTC	3 cut(s)	146, 209, 455
AlwI	GGATC	2 cut(s)	691, 769
Ama87I	CYCGRG	1 cut(s)	959
Aor13HI	TCCGGA	2 cut(s)	886, 1166
AoxI	GGCC	1 cut(s)	396
ApeKI	GCWGC	7 cut(s)	46, 568, 595, 646, 709, 1433, 1622
ApoI	RAATTY	2 cut(s)	26, 266
AsiGI	ACCGGT	1 cut(s)	897
Asp700I	GAANNNNTTC	2 cut(s)	326, 1149
AspLEI	GCGC	5 cut(s)	290, 568, 646, 847, 938
AspS9I	GGNCC	4 cut(s)	889, 1028, 1095, 1236
AsuC2I	CCSGG	2 cut(s)	533, 551
AsuHPI	GGTGA	9 cut(s)	151, 172, 424, 550, 619, 643, 847, 937, 1280
AvaI	CYCGRG	1 cut(s)	959
AvaII	GGWCC	4 cut(s)	889, 1028, 1095, 1236
AxyI	CCTNAGG	1 cut(s)	1221
BanI	GGYRCC	1 cut(s)	287
BanII	GRGCYC	3 cut(s)	180, 960, 1368
Bbv12I	GWGCWC	3 cut(s)	180, 960, 1368
BbvI	GCAGC	7 cut(s)	33, 555, 582, 658, 696, 1420, 1609
BccI	CCATC	4 cut(s)	916, 940, 1248, 1395
BceAI	ACGGC	5 cut(s)	154, 333, 673, 697, 832
BcgI	CGANNNNNNTGC	2 cut(s)	577, 611
BciVI	GTATCC	1 cut(s)	1199
BclI	TGATCA	3 cut(s)	132, 381, 780
BcnI	CCSGG	2 cut(s)	533, 551
BcoDI	GTCTC	3 cut(s)	146, 209, 455
BfaI	CTAG	1 cut(s)	1639
BfmI	CTRYAG	3 cut(s)	840, 1434, 1623
BfoI	RGCGCY	3 cut(s)	291, 569, 848
BfuAI	ACCTGC	3 cut(s)	640, 900, 1616
BfuI	GTATCC	1 cut(s)	1199
BglII	AGATCT	1 cut(s)	1299
BlpI	GCTNAGC	1 cut(s)	1362
Bme1390I	CCNGG	2 cut(s)	533, 551
Bme18I	GGWCC	4 cut(s)	889, 1028, 1095, 1236
BmeRI	GACNNNNNGTC	2 cut(s)	761, 910
BmeT110I	CYCGRG	1 cut(s)	959
BmgBI	CACGTC	2 cut(s)	559, 694
BmgT120I	GGNCC	4 cut(s)	889, 1028, 1095, 1236
BmiI	GGNNCC	5 cut(s)	289, 942, 1096, 1446, 1477
BmrFI	CCNGG	2 cut(s)	533, 551
BmsI	GCATC	5 cut(s)	315, 600, 979, 1188, 1393
BplI	GAGNNNNNCTC	4 cut(s)	89, 121, 167, 199
Bpu1102I	GCTNAGC	1 cut(s)	1362
BpuEI	CTTGAG	2 cut(s)	375, 1627
BpuMI	CCSGG	2 cut(s)	533, 551
Bsa29I	ATCGAT	1 cut(s)	1284
BsaAI	YACGTR	1 cut(s)	403
BsaBI	GATNNNNATC	4 cut(s)	779, 1121, 1178, 1304
BsaHI	GRCGYC	3 cut(s)	171, 234, 288
BsaI	GGTCTC	2 cut(s)	146, 209
BsaJI	CCNNGG	5 cut(s)	283, 342, 531, 1020, 1183
BsaWI	WCCGGW	3 cut(s)	886, 897, 1166
BsaXI	ACNNNNNCTCC	2 cut(s)	713, 743
Bsc4I	CCNNNNNNNGG	1 cut(s)	739
Bse118I	RCCGGY	4 cut(s)	146, 200, 897, 1357
Bse1I	ACTGG	1 cut(s)	1031
Bse21I	CCTNAGG	1 cut(s)	1221
Bse3DI	GCAATG	1 cut(s)	1449
Bse8I	GATNNNNATC	4 cut(s)	779, 1121, 1178, 1304
BseAI	TCCGGA	2 cut(s)	886, 1166
BseCI	ATCGAT	1 cut(s)	1284
BseDI	CCNNGG	5 cut(s)	283, 342, 531, 1020, 1183
BseGI	GGATG	9 cut(s)	60, 490, 927, 1020, 1179, 1259, 1387, 1432, 1498
BseJI	GATNNNNATC	4 cut(s)	779, 1121, 1178, 1304
BseLI	CCNNNNNNNGG	1 cut(s)	739
BseMI	GCAATG	1 cut(s)	1449
BseMII	CTCAG	5 cut(s)	1104, 1212, 1221, 1353, 1479
BseNI	ACTGG	1 cut(s)	1031
BseRI	GAGGAG	2 cut(s)	236, 239
BseXI	GCAGC	7 cut(s)	33, 555, 582, 658, 696, 1420, 1609
BseYI	CCCAGC	1 cut(s)	501
BsgI	GTGCAG	1 cut(s)	878
Bsh1236I	CGCG	2 cut(s)	762, 938
BshFI	GGCC	1 cut(s)	398
BshNI	GGYRCC	1 cut(s)	287
BshTI	ACCGGT	1 cut(s)	897
BshVI	ATCGAT	1 cut(s)	1284
BsiHKAI	GWGCWC	3 cut(s)	180, 960, 1368
BsiHKCI	CYCGRG	1 cut(s)	959
BslFI	GGGAC	3 cut(s)	108, 598, 1108
BslI	CCNNNNNNNGG	1 cut(s)	739
BsmAI	GTCTC	3 cut(s)	146, 209, 455
BsmFI	GGGAC	3 cut(s)	108, 598, 1108
BsmI	GAATGC	2 cut(s)	219, 278
BsnI	GGCC	1 cut(s)	398
Bso31I	GGTCTC	2 cut(s)	146, 209
BsoBI	CYCGRG	1 cut(s)	959
Bsp1286I	GDGCHC	3 cut(s)	180, 960, 1368
Bsp13I	TCCGGA	2 cut(s)	886, 1166
Bsp1720I	GCTNAGC	1 cut(s)	1362
BspACI	CCGC	9 cut(s)	187, 198, 395, 536, 753, 760, 938, 1092, 1407
BspANI	GGCC	1 cut(s)	398
BspCNI	CTCAG	5 cut(s)	1105, 1213, 1222, 1354, 1480
BspDI	ATCGAT	1 cut(s)	1284
BspEI	TCCGGA	2 cut(s)	886, 1166
BspFNI	CGCG	2 cut(s)	762, 938
BspHI	TCATGA	1 cut(s)	1197
BspLI	GGNNCC	5 cut(s)	289, 942, 1096, 1446, 1477
BspMAI	CTGCAG	2 cut(s)	1438, 1627
BspMI	ACCTGC	3 cut(s)	640, 900, 1616
BspPI	GGATC	2 cut(s)	691, 769
BspT107I	GGYRCC	1 cut(s)	287
BspTNI	GGTCTC	2 cut(s)	146, 209
BsrDI	GCAATG	1 cut(s)	1449
BsrFI	RCCGGY	4 cut(s)	146, 200, 897, 1357
BsrI	ACTGG	1 cut(s)	1031
BssAI	RCCGGY	4 cut(s)	146, 200, 897, 1357
BssECI	CCNNGG	5 cut(s)	283, 342, 531, 1020, 1183
BssNI	GRCGYC	3 cut(s)	171, 234, 288
Bst4CI	ACNGT	6 cut(s)	20, 122, 970, 1099, 1316, 1475
BstACI	GRCGYC	3 cut(s)	171, 234, 288
BstBAI	YACGTR	1 cut(s)	403
BstC8I	GCNNGC	4 cut(s)	357, 707, 1090, 1620
BstDEI	CTNAG	5 cut(s)	1113, 1221, 1230, 1362, 1488
BstF5I	GGATG	9 cut(s)	60, 490, 927, 1020, 1179, 1259, 1387, 1432, 1498
BstFNI	CGCG	2 cut(s)	762, 938
BstH2I	RGCGCY	3 cut(s)	291, 569, 848
BstHHI	GCGC	5 cut(s)	290, 568, 646, 847, 938
BstMAI	GTCTC	3 cut(s)	146, 209, 455
BstMWI	GCNNNNNNNGC	7 cut(s)	147, 347, 356, 371, 759, 853, 1619
BstSCI	CCNGG	2 cut(s)	531, 549
BstSFI	CTRYAG	3 cut(s)	840, 1434, 1623
BstUI	CGCG	2 cut(s)	762, 938
BstV1I	GCAGC	7 cut(s)	33, 555, 582, 658, 696, 1420, 1609
BstX2I	RGATCY	1 cut(s)	1299
BstXI	CCANNNNNNTGG	1 cut(s)	1048
BstYI	RGATCY	1 cut(s)	1299
Bsu15I	ATCGAT	1 cut(s)	1284
Bsu36I	CCTNAGG	1 cut(s)	1221
BsuI	GTATCC	1 cut(s)	1199
BsuRI	GGCC	1 cut(s)	398
BsuTUI	ATCGAT	1 cut(s)	1284
BtgZI	GCGATG	1 cut(s)	859
BtrI	CACGTC	2 cut(s)	559, 694
BtsCI	GGATG	9 cut(s)	60, 490, 927, 1020, 1179, 1259, 1387, 1432, 1498
BtsI	GCAGTG	1 cut(s)	360
BtsIMutI	CAGTG	2 cut(s)	360, 966
BveI	ACCTGC	3 cut(s)	640, 900, 1616
Cac8I	GCNNGC	4 cut(s)	357, 707, 1090, 1620
CciI	TCATGA	1 cut(s)	1197
CfoI	GCGC	5 cut(s)	290, 568, 646, 847, 938
Cfr10I	RCCGGY	4 cut(s)	146, 200, 897, 1357
Cfr13I	GGNCC	4 cut(s)	889, 1028, 1095, 1236
ClaI	ATCGAT	1 cut(s)	1284
CseI	GACGC	2 cut(s)	625, 751
Csp6I	GTAC	2 cut(s)	901, 1279
CspAI	ACCGGT	1 cut(s)	897
CspCI	CAANNNNNGTGG	2 cut(s)	1503, 1538
CviAII	CATG	7 cut(s)	116, 241, 448, 784, 1042, 1198, 1375
CviQI	GTAC	2 cut(s)	901, 1279
DdeI	CTNAG	5 cut(s)	1113, 1221, 1230, 1362, 1488
DinI	GGCGCC	1 cut(s)	289
DraI	TTTAAA	1 cut(s)	1320
DrdI	GACNNNNNNGTC	1 cut(s)	469
DriI	GACNNNNNGTC	2 cut(s)	761, 910
DseDI	GACNNNNNNGTC	1 cut(s)	469
Eam1105I	GACNNNNNGTC	2 cut(s)	761, 910
Ecl136II	GAGCTC	3 cut(s)	178, 958, 1366
Eco24I	GRGCYC	3 cut(s)	180, 960, 1368
Eco31I	GGTCTC	2 cut(s)	146, 209
Eco32I	GATATC	1 cut(s)	1485
Eco47I	GGWCC	4 cut(s)	889, 1028, 1095, 1236
Eco53kI	GAGCTC	3 cut(s)	178, 958, 1366
Eco81I	CCTNAGG	1 cut(s)	1221
Eco88I	CYCGRG	1 cut(s)	959
EcoICRI	GAGCTC	3 cut(s)	178, 958, 1366
EcoRI	GAATTC	2 cut(s)	26, 266
EcoRV	GATATC	1 cut(s)	1485
EcoT38I	GRGCYC	3 cut(s)	180, 960, 1368
EgeI	GGCGCC	1 cut(s)	289
EheI	GGCGCC	1 cut(s)	289
FaeI	CATG	7 cut(s)	119, 244, 451, 787, 1045, 1201, 1378
FaqI	GGGAC	3 cut(s)	108, 598, 1108
FatI	CATG	7 cut(s)	115, 240, 447, 783, 1041, 1197, 1374
FauI	CCCGC	2 cut(s)	194, 1085
FbaI	TGATCA	3 cut(s)	132, 381, 780
FblI	GTMKAC	2 cut(s)	654, 1630
FokI	GGATG	9 cut(s)	47, 497, 934, 1027, 1166, 1266, 1374, 1439, 1505
FriOI	GRGCYC	3 cut(s)	180, 960, 1368
FspBI	CTAG	1 cut(s)	1639
GlaI	GCGC	5 cut(s)	289, 567, 645, 846, 937
GsaI	CCCAGC	1 cut(s)	505
HaeII	RGCGCY	3 cut(s)	291, 569, 848
HaeIII	GGCC	1 cut(s)	398
HgaI	GACGC	2 cut(s)	625, 751
HhaI	GCGC	5 cut(s)	290, 568, 646, 847, 938
Hin1I	GRCGYC	3 cut(s)	171, 234, 288
Hin1II	CATG	7 cut(s)	119, 244, 451, 787, 1045, 1201, 1378
Hin6I	GCGC	5 cut(s)	288, 566, 644, 845, 936
HinP1I	GCGC	5 cut(s)	288, 566, 644, 845, 936
HincII	GTYRAC	2 cut(s)	655, 1312
HindII	GTYRAC	2 cut(s)	655, 1312
HinfI	GANTC	5 cut(s)	192, 444, 756, 883, 1145
HphI	GGTGA	9 cut(s)	151, 172, 424, 550, 619, 643, 847, 937, 1280
Hpy166II	GTNNAC	5 cut(s)	406, 457, 655, 1312, 1631
Hpy188I	TCNGA	9 cut(s)	302, 481, 767, 861, 945, 1001, 1184, 1402, 1489
Hpy188III	TCNNGA	8 cut(s)	23, 64, 97, 206, 778, 887, 1167, 1198
Hpy8I	GTNNAC	5 cut(s)	406, 457, 655, 1312, 1631
HpyAV	CCTTC	9 cut(s)	166, 283, 337, 409, 946, 1160, 1244, 1417, 1590
HpyCH4III	ACNGT	6 cut(s)	20, 122, 970, 1099, 1316, 1475
HpyCH4IV	ACGT	7 cut(s)	171, 234, 297, 402, 438, 558, 693
HpyCH4V	TGCA	9 cut(s)	493, 787, 895, 1058, 1179, 1261, 1436, 1454, 1625
HpyF10VI	GCNNNNNNNGC	7 cut(s)	147, 347, 356, 371, 759, 853, 1619
HpyF3I	CTNAG	5 cut(s)	1113, 1221, 1230, 1362, 1488
HpySE526I	ACGT	7 cut(s)	171, 234, 297, 402, 438, 558, 693
Hsp92I	GRCGYC	3 cut(s)	171, 234, 288
Hsp92II	CATG	7 cut(s)	119, 244, 451, 787, 1045, 1201, 1378
HspAI	GCGC	5 cut(s)	288, 566, 644, 845, 936
KasI	GGCGCC	1 cut(s)	287
Kpn2I	TCCGGA	2 cut(s)	886, 1166
Ksp22I	TGATCA	3 cut(s)	132, 381, 780
LmnI	GCTCC	5 cut(s)	249, 767, 946, 955, 1582
Lsp1109I	GCAGC	7 cut(s)	33, 555, 582, 658, 696, 1420, 1609
LweI	GCATC	5 cut(s)	315, 600, 979, 1188, 1393
MaeI	CTAG	1 cut(s)	1639
MaeII	ACGT	7 cut(s)	171, 234, 297, 402, 438, 558, 693
MaeIII	GTNAC	3 cut(s)	20, 631, 835
MboII	GAAGA	3 cut(s)	1132, 1294, 1546
MflI	RGATCY	1 cut(s)	1299
MhlI	GDGCHC	3 cut(s)	180, 960, 1368
MluCI	AATT	3 cut(s)	26, 110, 266
Mly113I	GGCGCC	1 cut(s)	288
MlyI	GAGTC	4 cut(s)	201, 438, 750, 892
MmeI	TCCRAC	4 cut(s)	280, 393, 745, 792
MroI	TCCGGA	2 cut(s)	886, 1166
MroXI	GAANNNNTTC	2 cut(s)	326, 1149
MseI	TTAA	3 cut(s)	1319, 1332, 1500
MslI	CAYNNNNRTG	2 cut(s)	452, 1266
MspA1I	CMGCKG	2 cut(s)	505, 1409
MspR9I	CCNGG	2 cut(s)	533, 551
Mva1269I	GAATGC	2 cut(s)	219, 278
MvnI	CGCG	2 cut(s)	762, 938
MwoI	GCNNNNNNNGC	7 cut(s)	147, 347, 356, 371, 759, 853, 1619
NarI	GGCGCC	1 cut(s)	288
NciI	CCSGG	2 cut(s)	533, 551
NlaIII	CATG	7 cut(s)	119, 244, 451, 787, 1045, 1201, 1378
NlaIV	GGNNCC	5 cut(s)	289, 942, 1096, 1446, 1477
NmeAIII	GCCGAG	3 cut(s)	195, 264, 367
NmuCI	GTSAC	3 cut(s)	20, 631, 835
OliI	CACNNNNGTG	1 cut(s)	1266
PaeR7I	CTCGAG	1 cut(s)	959
PagI	TCATGA	1 cut(s)	1197
PcsI	WCGNNNNNNNCGW	3 cut(s)	584, 596, 1290
PctI	GAATGC	2 cut(s)	219, 278
PdmI	GAANNNNTTC	2 cut(s)	326, 1149
PfeI	GAWTC	1 cut(s)	1145
PflFI	GACNNNGTC	3 cut(s)	236, 466, 968
PinAI	ACCGGT	1 cut(s)	897
PleI	GAGTC	4 cut(s)	200, 438, 750, 891
PluTI	GGCGCC	1 cut(s)	291
PpsI	GAGTC	4 cut(s)	200, 438, 750, 891
Ppu21I	YACGTR	1 cut(s)	403
Psp124BI	GAGCTC	3 cut(s)	180, 960, 1368
Psp1406I	AACGTT	1 cut(s)	438
PspFI	CCCAGC	1 cut(s)	501
PspN4I	GGNNCC	5 cut(s)	289, 942, 1096, 1446, 1477
PspPI	GGNCC	4 cut(s)	889, 1028, 1095, 1236
PspXI	VCTCGAGB	1 cut(s)	959
PsrI	GAACNNNNNNTAC	2 cut(s)	314, 346
PstI	CTGCAG	2 cut(s)	1438, 1627
PsuI	RGATCY	1 cut(s)	1299
PsyI	GACNNNGTC	3 cut(s)	236, 466, 968
PvuII	CAGCTG	1 cut(s)	505
RsaI	GTAC	2 cut(s)	902, 1280
RsaNI	GTAC	2 cut(s)	901, 1279
RseI	CAYNNNNRTG	2 cut(s)	452, 1266
SacI	GAGCTC	3 cut(s)	180, 960, 1368
SalI	GTCGAC	1 cut(s)	653
SaqAI	TTAA	3 cut(s)	1319, 1332, 1500
Sau96I	GGNCC	4 cut(s)	889, 1028, 1095, 1236
SchI	GAGTC	4 cut(s)	201, 438, 750, 892
ScrFI	CCNGG	2 cut(s)	533, 551
SduI	GDGCHC	3 cut(s)	180, 960, 1368
SfaNI	GCATC	5 cut(s)	315, 600, 979, 1188, 1393
SfcI	CTRYAG	3 cut(s)	840, 1434, 1623
SfoI	GGCGCC	1 cut(s)	289
Sfr274I	CTCGAG	1 cut(s)	959
SgrAI	CRCCGGYG	1 cut(s)	146
SinI	GGWCC	4 cut(s)	889, 1028, 1095, 1236
SlaI	CTCGAG	1 cut(s)	959
SmiMI	CAYNNNNRTG	2 cut(s)	452, 1266
SmlI	CTYRAG	3 cut(s)	390, 959, 1606
SmoI	CTYRAG	3 cut(s)	390, 959, 1606
Sse9I	AATT	3 cut(s)	26, 110, 266
SsiI	CCGC	9 cut(s)	187, 198, 395, 536, 753, 760, 938, 1092, 1407
SspDI	GGCGCC	1 cut(s)	287
SspI	AATATT	1 cut(s)	1593
SspMI	CTAG	1 cut(s)	1639
SstI	GAGCTC	3 cut(s)	180, 960, 1368
StyD4I	CCNGG	2 cut(s)	531, 549
TaaI	ACNGT	6 cut(s)	20, 122, 970, 1099, 1316, 1475
TaiI	ACGT	7 cut(s)	174, 237, 300, 405, 441, 561, 696
TaqI	TCGA	9 cut(s)	96, 174, 207, 654, 914, 960, 1128, 1284, 1368
TaqII	GACCGA	1 cut(s)	1034
TasI	AATT	3 cut(s)	26, 110, 266
TauI	GCSGC	4 cut(s)	200, 398, 941, 1409
TfiI	GAWTC	1 cut(s)	1145
Tru1I	TTAA	3 cut(s)	1319, 1332, 1500
Tru9I	TTAA	3 cut(s)	1319, 1332, 1500
TscAI	CASTG	2 cut(s)	367, 973
TseFI	GTSAC	3 cut(s)	20, 631, 835
TseI	GCWGC	7 cut(s)	46, 568, 595, 646, 709, 1433, 1622
Tsp45I	GTSAC	3 cut(s)	20, 631, 835
TspDTI	ATGAA	7 cut(s)	19, 212, 1133, 1158, 1214, 1294, 1436
TspGWI	ACGGA	1 cut(s)	26
TspRI	CASTG	2 cut(s)	367, 973
Tth111I	GACNNNGTC	3 cut(s)	236, 466, 968
VpaK11BI	GGWCC	4 cut(s)	889, 1028, 1095, 1236
XapI	RAATTY	2 cut(s)	26, 266
XhoI	CTCGAG	1 cut(s)	959
XmiI	GTMKAC	2 cut(s)	654, 1630
XmnI	GAANNNNTTC	2 cut(s)	326, 1149
XspI	CTAG	1 cut(s)	1639
ZraI	GACGTC	2 cut(s)	172, 235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.