Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001962

Physical Location & Seq

Genomic Coordinates Forward (+)

38169974 .. 38175273

Gene Structure 5300 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00112820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGCAATCGAAACACCCCAAAGCGACATCATCTACCGATCCAAGCTCCCGGACATTCCCATTCCAAACCACCTCCCTCTCCATTCCTACATCTTCCAAAACAAATCCCACCTCAGCTCAAAGCCTTGCATCATCAATGGCACCACCGGCGAGGTCCACACCTACGCCGATGTCGAGCTCACCGCCCGGAAAGTCGCCTCCGGTCTCAACAAGCTCGGCATCAAGCAAGGCGACGTCGTCATGCTCCTCCTCCCCAACACTCCCGAATTCGTCTTCACCTTCTTGGGAGCCTCCTTCCGCGGCGCCATGACCACCGCCGCCAACCCTTTCTTCACTCCAGCGGAGATAGCCAAACAAGCGAAAGCATCGAAAGCCAAGCTGATCATCACTCTCGCTAGCTATTACGAAAAAGTTAAAGAGTTGTCATGCGACGAAGTTAAGTTGATGTGCATTGACTCCCCGCCACCCGACTCGTCTTGTCTCCATTTCTCCGAACTGACTCAGTCCAATGAGGACGACGTGCCGGAAGTTGACATCAGCCCGAACGACGTCGTGTTGTTACCCTACTCGTCCGGCACGACGGGGCTGCCGAAAGGGGTGATGCTGACGCACAAGGGCTTGGTGACGAGCGTGTCTCAGCAGGTTGACGGAGAGAATCCGAACTTGTACTACAACAGCGACGACGTCGTTCTGTGTGTGCTGCCGCTGTTTCACATTTACTCGCTGAACTCGGTCTTGCTATGTGGGTTGAGAGCCGGAGCTGCCATTCTGGTGATGCAGAAGTTTGAAATTGTTTCTCTTTTGGAGCTCATGCAGAAGCATAGAGTTAGTGTTGCGCCGGTCGCGCCTCCGATTGTTCTGGCGATCGCGAAGTTTCCCGATCTCGACAAGTACGATTTGGGGTCGATAAGGGTGCTGAAGAGTGGAGGAGCACCGTTGGGGAAGGAGCTTGAAGACACAGTCAGAGCCAAATTTCCCAATGTAACGCTTGGTCAGGGGTATGGGATGACGGAGGCAGGACCGGTTTTGACAATGTCATTGGCATTTGCAAAAGAACCCTTTGAGGTAAAACCAGGTGGGTGCGGAACTGTGGTCAGAAATGCAGAAATGAAGATCGTAGACCCTGAAACTGGTGCCTCTTTGCCGCACAACCAGCGTGGAGAGATTTGCATCAGAGGCCACCAGATCATGAAAGGTTACCTTAATGATCCGGAGGCCACAAGCACAACGATAGACAAGGAAGGATGGCTACACACAGGTGACATAGGCTTCATTGATGATGATGAAGAGCTCTTCATTGTTGATCGACTGAAGGAGATTATCAAATACAAAGGATTTCAGGTGGCTCCTGCTGAGCTTGAAGCCTTGCTCGTCACCCATCCTAACATTTCTGATGCCGCAGTTGTCTCAATGAAGGATGATGCTGCTGGCGAGGTTCCGGTTGCCTTTGTGGTGAGGTCAAACGGATCTCAGATCACTGAGGATGAAATCAAGCAATTTATTTCAAAACAGGTTATATACTACAAAAGAATAAAACGAGTATTCTTCATCGAAGCCATTCCCAAGTCACCATCTGGCAAGATCTTGCGGAAGGAGTTAAGAGCAAAGCTAGCTGCCGGCTCAGCAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016207 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

543

Amino Acids

59.15

Weight (kDa)

5.81

Isoelectric Point (pI)

35.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	40 - 401	2.8e-96	AMP-binding enzyme
AMP-binding_C	PF13193	452 - 527	1.8e-18	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51680 AT1G51680 AT1G51680 AT3G21240 AT3G21240 AT3G21240
fragaria_vesca	FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940
malus_domestica	MD13G1257800.v1.1 MD17G1229400.v1.1
prunus_persica	Prupe.1G087900_v2.0.a1 Prupe.3G107300_v2.0.a1
pyrus_communis	pycom13g22250 pycom17g23190
rosa_chinensis	RchiOBHm_Chr2g0131501 RchiOBHm_Chr4g0402711 RchiOBHm_Chr5g0057551
rosa_laevigata	RLG00000009052 RLG00000019189
rosa_multiflora	Rmu_co7959539.1_g000001 Rmu_sc0000329.1_g000003 Rmu_sc0002230.1_g000020 Rmu_sc0002451.1_g000001 Rmu_sc0002808.1_g000009
rosa_roxburghii	Rroxscaffold_2G00112820 Rroxscaffold_5G00347470
rosa_rugosa	Rorug02G0297600 Rorug04G0037900
rosa_samantha	Rh2AG350900 Rh2BG357400 Rh2CG336600 Rh2DG375300 Rh4AG115500 Rh4CG122400 Rh4DG108000
rosa_wichuraiana	Rw2G028470 Rw4G009230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	631
AatII	GACGTC	3 cut(s)	237, 552, 687
Acc36I	ACCTGC	1 cut(s)	631
AccB1I	GGYRCC	3 cut(s)	140, 302, 1133
AccI	GTMKAC	1 cut(s)	1119
AccII	CGCG	3 cut(s)	300, 845, 869
AccIII	TCCGGA	1 cut(s)	1210
AclWI	GGATC	3 cut(s)	33, 1202, 1474
AcsI	RAATTY	2 cut(s)	266, 971
AcuI	CTGAAG	2 cut(s)	938, 1331
AcyI	GRCGYC	4 cut(s)	234, 303, 549, 684
AfaI	GTAC	2 cut(s)	668, 893
AfiI	CCNNNNNNNGG	1 cut(s)	1130
AgeI	ACCGGT	1 cut(s)	1021
AgsI	TTSAA	4 cut(s)	788, 953, 1361, 1506
AjiI	CACGTC	1 cut(s)	520
AjnI	CCWGG	1 cut(s)	1072
AjuI	GAANNNNNNNTTGG	2 cut(s)	314, 346
AleI	CACNNNNGTG	1 cut(s)	1257
Alw21I	GWGCWC	4 cut(s)	180, 810, 934, 1293
Alw26I	GTCTC	4 cut(s)	209, 485, 639, 1411
AlwI	GGATC	3 cut(s)	33, 1202, 1474
Aor13HI	TCCGGA	1 cut(s)	1210
AoxI	GGCC	2 cut(s)	1177, 1215
ApeKI	GCWGC	5 cut(s)	586, 700, 761, 1424, 1613
ApoI	RAATTY	2 cut(s)	266, 971
AsiGI	ACCGGT	1 cut(s)	1021
AsiSI	GCGATCGC	1 cut(s)	867
Asp700I	GAANNNNTTC	1 cut(s)	1557
AspLEI	GCGC	3 cut(s)	305, 838, 847
AspS9I	GGNCC	2 cut(s)	154, 1019
AsuC2I	CCSGG	2 cut(s)	50, 187
AsuHPI	GGTGA	9 cut(s)	172, 268, 610, 634, 784, 1271, 1366, 1465, 1560
AsuNHI	GCTAGC	2 cut(s)	395, 1609
AvaII	GGWCC	2 cut(s)	154, 1019
BanI	GGYRCC	3 cut(s)	140, 302, 1133
BanII	GRGCYC	3 cut(s)	180, 810, 1293
BarI	GAAGNNNNNNTAC	2 cut(s)	1233, 1265
BbsI	GAAGAC	2 cut(s)	265, 960
Bbv12I	GWGCWC	4 cut(s)	180, 810, 934, 1293
BbvCI	CCTCAGC	1 cut(s)	113
BbvI	GCAGC	5 cut(s)	573, 687, 748, 1411, 1600
BccI	CCATC	3 cut(s)	1239, 1386, 1579
BcgI	CGANNNNNNTGC	4 cut(s)	568, 602, 895, 929
BciT130I	CCWGG	1 cut(s)	1074
BclI	TGATCA	1 cut(s)	381
BcnI	CCSGG	2 cut(s)	50, 187
BcoDI	GTCTC	4 cut(s)	209, 485, 639, 1411
BfaI	CTAG	2 cut(s)	396, 1610
BfoI	RGCGCY	1 cut(s)	306
BfuAI	ACCTGC	1 cut(s)	631
BglII	AGATCT	1 cut(s)	1581
BlpI	GCTNAGC	2 cut(s)	1353, 1621
Bme1390I	CCNGG	3 cut(s)	50, 187, 1074
Bme18I	GGWCC	2 cut(s)	154, 1019
BmgBI	CACGTC	1 cut(s)	520
BmgT120I	GGNCC	2 cut(s)	154, 1019
BmiI	GGNNCC	6 cut(s)	142, 289, 304, 1135, 1347, 1437
BmrFI	CCNGG	3 cut(s)	50, 187, 1074
BmsI	GCATC	8 cut(s)	138, 228, 374, 591, 765, 1179, 1384, 1411
BmtI	GCTAGC	2 cut(s)	399, 1613
BpiI	GAAGAC	2 cut(s)	265, 960
BplI	GAGNNNNNCTC	2 cut(s)	619, 651
BpmI	CTGGAG	1 cut(s)	321
Bpu10I	CCTNAGC	1 cut(s)	113
Bpu1102I	GCTNAGC	2 cut(s)	1353, 1621
BpuMI	CCSGG	2 cut(s)	50, 187
BsaBI	GATNNNNATC	1 cut(s)	1169
BsaHI	GRCGYC	4 cut(s)	234, 303, 549, 684
BsaI	GGTCTC	1 cut(s)	209
BsaJI	CCNNGG	1 cut(s)	298
BsaWI	WCCGGW	4 cut(s)	200, 1021, 1210, 1438
Bsc4I	CCNNNNNNNGG	1 cut(s)	1130
Bse118I	RCCGGY	4 cut(s)	146, 838, 1021, 1616
Bse1I	ACTGG	1 cut(s)	1135
Bse8I	GATNNNNATC	1 cut(s)	1169
BseAI	TCCGGA	1 cut(s)	1210
BseBI	CCWGG	1 cut(s)	1074
BseDI	CCNNGG	1 cut(s)	298
BseGI	GGATG	5 cut(s)	1011, 1250, 1378, 1423, 1489
BseJI	GATNNNNATC	1 cut(s)	1169
BseLI	CCNNNNNNNGG	1 cut(s)	1130
BseMII	CTCAG	6 cut(s)	127, 515, 650, 1344, 1470, 1484
BseNI	ACTGG	1 cut(s)	1135
BseRI	GAGGAG	3 cut(s)	236, 239, 942
BseXI	GCAGC	5 cut(s)	573, 687, 748, 1411, 1600
Bsh1236I	CGCG	3 cut(s)	300, 845, 869
Bsh1285I	CGRYCG	2 cut(s)	843, 867
BshFI	GGCC	2 cut(s)	1179, 1217
BshNI	GGYRCC	3 cut(s)	140, 302, 1133
BshTI	ACCGGT	1 cut(s)	1021
BsiEI	CGRYCG	2 cut(s)	843, 867
BsiHKAI	GWGCWC	4 cut(s)	180, 810, 934, 1293
BslI	CCNNNNNNNGG	1 cut(s)	1130
BsmAI	GTCTC	4 cut(s)	209, 485, 639, 1411
BsnI	GGCC	2 cut(s)	1179, 1217
Bso31I	GGTCTC	1 cut(s)	209
Bsp1286I	GDGCHC	4 cut(s)	180, 810, 934, 1293
Bsp13I	TCCGGA	1 cut(s)	1210
Bsp1720I	GCTNAGC	2 cut(s)	1353, 1621
Bsp68I	TCGCGA	1 cut(s)	869
BspANI	GGCC	2 cut(s)	1179, 1217
BspCNI	CTCAG	6 cut(s)	126, 514, 649, 1345, 1471, 1483
BspEI	TCCGGA	1 cut(s)	1210
BspFNI	CGCG	3 cut(s)	300, 845, 869
BspHI	TCATGA	1 cut(s)	1188
BspLI	GGNNCC	6 cut(s)	142, 289, 304, 1135, 1347, 1437
BspMI	ACCTGC	1 cut(s)	631
BspOI	GCTAGC	2 cut(s)	399, 1613
BspPI	GGATC	3 cut(s)	33, 1202, 1474
BspQI	GCTCTTC	2 cut(s)	1281, 1298
BspT107I	GGYRCC	3 cut(s)	140, 302, 1133
BspTNI	GGTCTC	1 cut(s)	209
BsrFI	RCCGGY	4 cut(s)	146, 838, 1021, 1616
BsrI	ACTGG	1 cut(s)	1135
BssAI	RCCGGY	4 cut(s)	146, 838, 1021, 1616
BssECI	CCNNGG	1 cut(s)	298
BssNI	GRCGYC	4 cut(s)	234, 303, 549, 684
Bst2UI	CCWGG	1 cut(s)	1074
Bst4CI	ACNGT	3 cut(s)	936, 961, 1090
Bst6I	CTCTTC	3 cut(s)	914, 1281, 1298
BstACI	GRCGYC	4 cut(s)	234, 303, 549, 684
BstC8I	GCNNGC	4 cut(s)	397, 1429, 1611, 1618
BstDEI	CTNAG	7 cut(s)	113, 501, 636, 1353, 1470, 1479, 1621
BstDSI	CCRYGG	1 cut(s)	298
BstEII	GGTNACC	1 cut(s)	1196
BstF5I	GGATG	5 cut(s)	1011, 1250, 1378, 1423, 1489
BstFNI	CGCG	3 cut(s)	300, 845, 869
BstH2I	RGCGCY	1 cut(s)	306
BstHHI	GCGC	3 cut(s)	305, 838, 847
BstMAI	GTCTC	4 cut(s)	209, 485, 639, 1411
BstMCI	CGRYCG	2 cut(s)	843, 867
BstNI	CCWGG	1 cut(s)	1074
BstPI	GGTNACC	1 cut(s)	1196
BstSCI	CCNGG	3 cut(s)	48, 185, 1072
BstUI	CGCG	3 cut(s)	300, 845, 869
BstV1I	GCAGC	5 cut(s)	573, 687, 748, 1411, 1600
BstV2I	GAAGAC	2 cut(s)	265, 960
BstX2I	RGATCY	2 cut(s)	1466, 1581
BstYI	RGATCY	2 cut(s)	1466, 1581
BsuRI	GGCC	2 cut(s)	1179, 1217
BtgI	CCRYGG	1 cut(s)	298
BtrI	CACGTC	1 cut(s)	520
BtsCI	GGATG	5 cut(s)	1011, 1250, 1378, 1423, 1489
BtsIMutI	CAGTG	1 cut(s)	1476
BtuMI	TCGCGA	1 cut(s)	869
BveI	ACCTGC	1 cut(s)	631
Cac8I	GCNNGC	4 cut(s)	397, 1429, 1611, 1618
CciI	TCATGA	1 cut(s)	1188
CfoI	GCGC	3 cut(s)	305, 838, 847
Cfr10I	RCCGGY	4 cut(s)	146, 838, 1021, 1616
Cfr13I	GGNCC	2 cut(s)	154, 1019
Cfr42I	CCGCGG	1 cut(s)	301
CseI	GACGC	1 cut(s)	616
CsiI	ACCWGGT	1 cut(s)	1072
Csp6I	GTAC	2 cut(s)	667, 892
CspAI	ACCGGT	1 cut(s)	1021
CspCI	CAANNNNNGTGG	2 cut(s)	1138, 1173
CviAII	CATG	5 cut(s)	241, 307, 426, 811, 1189
CviQI	GTAC	2 cut(s)	667, 892
DdeI	CTNAG	7 cut(s)	113, 501, 636, 1353, 1470, 1479, 1621
DinI	GGCGCC	1 cut(s)	304
DrdI	GACNNNNNNGTC	1 cut(s)	631
DseDI	GACNNNNNNGTC	1 cut(s)	631
Eam1104I	CTCTTC	3 cut(s)	914, 1281, 1298
EarI	CTCTTC	3 cut(s)	914, 1281, 1298
Ecl136II	GAGCTC	3 cut(s)	178, 808, 1291
Eco24I	GRGCYC	3 cut(s)	180, 810, 1293
Eco31I	GGTCTC	1 cut(s)	209
Eco47I	GGWCC	2 cut(s)	154, 1019
Eco53kI	GAGCTC	3 cut(s)	178, 808, 1291
Eco57I	CTGAAG	2 cut(s)	938, 1331
Eco91I	GGTNACC	1 cut(s)	1196
EcoICRI	GAGCTC	3 cut(s)	178, 808, 1291
EcoO65I	GGTNACC	1 cut(s)	1196
EcoRI	GAATTC	1 cut(s)	266
EcoRII	CCWGG	1 cut(s)	1072
EcoT38I	GRGCYC	3 cut(s)	180, 810, 1293
EgeI	GGCGCC	1 cut(s)	304
EheI	GGCGCC	1 cut(s)	304
FaeI	CATG	5 cut(s)	244, 310, 429, 814, 1192
FalI	AAGNNNNNCTT	2 cut(s)	1185, 1217
FatI	CATG	5 cut(s)	240, 306, 425, 810, 1188
FauI	CCCGC	1 cut(s)	468
FbaI	TGATCA	1 cut(s)	381
FblI	GTMKAC	1 cut(s)	1119
FokI	GGATG	5 cut(s)	1018, 1257, 1365, 1430, 1496
FriOI	GRGCYC	3 cut(s)	180, 810, 1293
FspBI	CTAG	2 cut(s)	396, 1610
GlaI	GCGC	3 cut(s)	304, 837, 846
GsuI	CTGGAG	1 cut(s)	321
HaeII	RGCGCY	1 cut(s)	306
HaeIII	GGCC	2 cut(s)	1179, 1217
HgaI	GACGC	1 cut(s)	616
HhaI	GCGC	3 cut(s)	305, 838, 847
Hin1I	GRCGYC	4 cut(s)	234, 303, 549, 684
Hin1II	CATG	5 cut(s)	244, 310, 429, 814, 1192
Hin6I	GCGC	3 cut(s)	303, 836, 845
HinP1I	GCGC	3 cut(s)	303, 836, 845
HincII	GTYRAC	2 cut(s)	532, 646
HindII	GTYRAC	2 cut(s)	532, 646
HinfI	GANTC	4 cut(s)	455, 470, 499, 655
HphI	GGTGA	9 cut(s)	172, 268, 610, 634, 784, 1271, 1366, 1465, 1560
Hpy166II	GTNNAC	4 cut(s)	157, 532, 646, 1120
Hpy188I	TCNGA	8 cut(s)	493, 660, 852, 965, 1097, 1175, 1393, 1473
Hpy188III	TCNNGA	6 cut(s)	263, 868, 878, 884, 1189, 1211
Hpy8I	GTNNAC	4 cut(s)	157, 532, 646, 1120
HpyAV	CCTTC	7 cut(s)	289, 304, 937, 1235, 1306, 1408, 1585
HpyCH4III	ACNGT	3 cut(s)	936, 961, 1090
HpyCH4IV	ACGT	4 cut(s)	234, 519, 549, 684
HpyCH4V	TGCA	7 cut(s)	129, 450, 778, 814, 1049, 1103, 1170
HpyF3I	CTNAG	7 cut(s)	113, 501, 636, 1353, 1470, 1479, 1621
HpySE526I	ACGT	4 cut(s)	234, 519, 549, 684
Hsp92I	GRCGYC	4 cut(s)	234, 303, 549, 684
Hsp92II	CATG	5 cut(s)	244, 310, 429, 814, 1192
HspAI	GCGC	3 cut(s)	303, 836, 845
KasI	GGCGCC	1 cut(s)	302
Kpn2I	TCCGGA	1 cut(s)	1210
KroI	GCCGGC	1 cut(s)	1616
KroNI	GCCGGC	1 cut(s)	1618
Ksp22I	TGATCA	1 cut(s)	381
KspI	CCGCGG	1 cut(s)	301
LguI	GCTCTTC	2 cut(s)	1281, 1298
LmnI	GCTCC	8 cut(s)	51, 249, 287, 758, 805, 929, 946, 1351
Lsp1109I	GCAGC	5 cut(s)	573, 687, 748, 1411, 1600
LweI	GCATC	8 cut(s)	138, 228, 374, 591, 765, 1179, 1384, 1411
MabI	ACCWGGT	1 cut(s)	1072
MaeI	CTAG	2 cut(s)	396, 1610
MaeII	ACGT	4 cut(s)	234, 519, 549, 684
MaeIII	GTNAC	7 cut(s)	558, 622, 982, 1196, 1259, 1372, 1566
MboII	GAAGA	9 cut(s)	85, 265, 322, 931, 965, 1123, 1285, 1298, 1537
MflI	RGATCY	2 cut(s)	1466, 1581
MhlI	GDGCHC	4 cut(s)	180, 810, 934, 1293
MluCI	AATT	5 cut(s)	266, 789, 971, 1496, 1627
Mly113I	GGCGCC	1 cut(s)	303
MlyI	GAGTC	3 cut(s)	449, 464, 493
MroI	TCCGGA	1 cut(s)	1210
MroNI	GCCGGC	1 cut(s)	1616
MroXI	GAANNNNTTC	1 cut(s)	1557
MseI	TTAA	4 cut(s)	414, 438, 1203, 1598
MslI	CAYNNNNRTG	2 cut(s)	770, 1257
MspA1I	CMGCKG	3 cut(s)	300, 341, 706
MspR9I	CCNGG	3 cut(s)	50, 187, 1074
MvaI	CCWGG	1 cut(s)	1074
MvnI	CGCG	3 cut(s)	300, 845, 869
NaeI	GCCGGC	1 cut(s)	1618
NarI	GGCGCC	1 cut(s)	303
NciI	CCSGG	2 cut(s)	50, 187
NgoMIV	GCCGGC	1 cut(s)	1616
NheI	GCTAGC	2 cut(s)	395, 1609
NlaIII	CATG	5 cut(s)	244, 310, 429, 814, 1192
NlaIV	GGNNCC	6 cut(s)	142, 289, 304, 1135, 1347, 1437
NmeAIII	GCCGAG	1 cut(s)	195
NmuCI	GTSAC	4 cut(s)	622, 1259, 1372, 1566
NruI	TCGCGA	1 cut(s)	869
OliI	CACNNNNGTG	1 cut(s)	1257
PagI	TCATGA	1 cut(s)	1188
PciSI	GCTCTTC	2 cut(s)	1281, 1298
PcsI	WCGNNNNNNNCGW	4 cut(s)	171, 575, 587, 891
PdiI	GCCGGC	1 cut(s)	1618
PdmI	GAANNNNTTC	1 cut(s)	1557
PfeI	GAWTC	1 cut(s)	655
PflFI	GACNNNGTC	5 cut(s)	236, 502, 683, 959, 1033
PfoI	TCCNGGA	1 cut(s)	48
PinAI	ACCGGT	1 cut(s)	1021
Ple19I	CGATCG	1 cut(s)	867
PleI	GAGTC	3 cut(s)	449, 464, 493
PluTI	GGCGCC	1 cut(s)	306
PpsI	GAGTC	3 cut(s)	449, 464, 493
Psp124BI	GAGCTC	3 cut(s)	180, 810, 1293
Psp6I	CCWGG	1 cut(s)	1072
PspEI	GGTNACC	1 cut(s)	1196
PspGI	CCWGG	1 cut(s)	1072
PspN4I	GGNNCC	6 cut(s)	142, 289, 304, 1135, 1347, 1437
PspPI	GGNCC	2 cut(s)	154, 1019
PsrI	GAACNNNNNNTAC	2 cut(s)	653, 685
PsuI	RGATCY	2 cut(s)	1466, 1581
PsyI	GACNNNGTC	5 cut(s)	236, 502, 683, 959, 1033
PvuI	CGATCG	1 cut(s)	867
RgaI	GCGATCGC	1 cut(s)	867
RruI	TCGCGA	1 cut(s)	869
RsaI	GTAC	2 cut(s)	668, 893
RsaNI	GTAC	2 cut(s)	667, 892
RseI	CAYNNNNRTG	2 cut(s)	770, 1257
SacI	GAGCTC	3 cut(s)	180, 810, 1293
SacII	CCGCGG	1 cut(s)	301
SapI	GCTCTTC	2 cut(s)	1281, 1298
SaqAI	TTAA	4 cut(s)	414, 438, 1203, 1598
Sau96I	GGNCC	2 cut(s)	154, 1019
SchI	GAGTC	3 cut(s)	449, 464, 493
ScrFI	CCNGG	3 cut(s)	50, 187, 1074
SduI	GDGCHC	4 cut(s)	180, 810, 934, 1293
SexAI	ACCWGGT	1 cut(s)	1072
SfaAI	GCGATCGC	1 cut(s)	867
SfaNI	GCATC	8 cut(s)	138, 228, 374, 591, 765, 1179, 1384, 1411
SfoI	GGCGCC	1 cut(s)	304
Sfr303I	CCGCGG	1 cut(s)	301
SgfI	GCGATCGC	1 cut(s)	867
SgrAI	CRCCGGYG	1 cut(s)	146
SgrBI	CCGCGG	1 cut(s)	301
SinI	GGWCC	2 cut(s)	154, 1019
SmiMI	CAYNNNNRTG	2 cut(s)	770, 1257
Sse9I	AATT	5 cut(s)	266, 789, 971, 1496, 1627
SspDI	GGCGCC	1 cut(s)	302
SspMI	CTAG	2 cut(s)	396, 1610
SstI	GAGCTC	3 cut(s)	180, 810, 1293
StyD4I	CCNGG	3 cut(s)	48, 185, 1072
TaaI	ACNGT	3 cut(s)	936, 961, 1090
TaiI	ACGT	4 cut(s)	237, 522, 552, 687
TaqI	TCGA	7 cut(s)	9, 174, 368, 885, 905, 1306, 1551
TaqII	GACCGA	1 cut(s)	721
TasI	AATT	5 cut(s)	266, 789, 971, 1496, 1627
TatI	WGTACW	1 cut(s)	666
TauI	GCSGC	5 cut(s)	303, 320, 706, 1147, 1400
TfiI	GAWTC	1 cut(s)	655
Tru1I	TTAA	4 cut(s)	414, 438, 1203, 1598
Tru9I	TTAA	4 cut(s)	414, 438, 1203, 1598
TscAI	CASTG	1 cut(s)	1483
TseFI	GTSAC	4 cut(s)	622, 1259, 1372, 1566
TseI	GCWGC	5 cut(s)	586, 700, 761, 1424, 1613
Tsp45I	GTSAC	4 cut(s)	622, 1259, 1372, 1566
TspDTI	ATGAA	8 cut(s)	1124, 1205, 1261, 1285, 1299, 1427, 1500, 1537
TspGWI	ACGGA	3 cut(s)	663, 1025, 1479
TspRI	CASTG	1 cut(s)	1483
Tth111I	GACNNNGTC	5 cut(s)	236, 502, 683, 959, 1033
VpaK11BI	GGWCC	2 cut(s)	154, 1019
XapI	RAATTY	2 cut(s)	266, 971
XmiI	GTMKAC	1 cut(s)	1119
XmnI	GAANNNNTTC	1 cut(s)	1557
XspI	CTAG	2 cut(s)	396, 1610
ZraI	GACGTC	3 cut(s)	235, 550, 685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.