4-coumarate-coa ligase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51680 AT1G51680 AT1G51680 AT3G21240 AT3G21240 AT3G21240 |
| fragaria_vesca | FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 |
| malus_domestica | MD13G1257800.v1.1 MD17G1229400.v1.1 |
| prunus_persica | Prupe.1G087900_v2.0.a1 Prupe.3G107300_v2.0.a1 |
| pyrus_communis | pycom13g22250 pycom17g23190 |
| rosa_chinensis | RchiOBHm_Chr2g0131501 RchiOBHm_Chr4g0402711 RchiOBHm_Chr5g0057551 |
| rosa_laevigata | RLG00000009052 RLG00000019189 |
| rosa_multiflora | Rmu_co7959539.1_g000001 Rmu_sc0000329.1_g000003 Rmu_sc0002230.1_g000020 Rmu_sc0002451.1_g000001 Rmu_sc0002808.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00112820 Rroxscaffold_5G00347470 |
| rosa_rugosa | Rorug02G0297600 Rorug04G0037900 |
| rosa_samantha | Rh2AG350900 Rh2BG357400 Rh2CG336600 Rh2DG375300 Rh4AG115500 Rh4CG122400 Rh4DG108000 |
| rosa_wichuraiana | Rw2G028470 Rw4G009230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 3 cut(s) | 234, 438, 555 |
| AccB1I | GGYRCC | 1 cut(s) | 934 |
| AccI | GTMKAC | 1 cut(s) | 402 |
| AccII | CGCG | 3 cut(s) | 194, 292, 317 |
| AclWI | GGATC | 2 cut(s) | 12, 685 |
| AcsI | RAATTY | 3 cut(s) | 263, 664, 1437 |
| AcyI | GRCGYC | 3 cut(s) | 231, 435, 552 |
| AdeI | CACNNNGTG | 1 cut(s) | 619 |
| AfaI | GTAC | 2 cut(s) | 896, 1410 |
| AfeI | AGCGCT | 1 cut(s) | 1247 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 733, 912, 1133 |
| AflIII | ACRYGT | 1 cut(s) | 474 |
| AgsI | TTSAA | 3 cut(s) | 112, 1315, 1364 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 475 |
| AjiI | CACGTC | 2 cut(s) | 475, 688 |
| AleI | CACNNNNGTG | 1 cut(s) | 1260 |
| Alw21I | GWGCWC | 2 cut(s) | 177, 1296 |
| Alw26I | GTCTC | 1 cut(s) | 143 |
| AlwI | GGATC | 2 cut(s) | 12, 685 |
| Ama87I | CYCGRG | 1 cut(s) | 281 |
| Aor51HI | AGCGCT | 1 cut(s) | 1247 |
| AoxI | GGCC | 4 cut(s) | 360, 1218, 1347, 1621 |
| ApeKI | GCWGC | 5 cut(s) | 562, 976, 1182, 1400, 1616 |
| ApoI | RAATTY | 3 cut(s) | 263, 664, 1437 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 323 |
| AspLEI | GCGC | 5 cut(s) | 294, 562, 640, 841, 1248 |
| AspS9I | GGNCC | 6 cut(s) | 36, 579, 1022, 1089, 1123, 1348 |
| AsuC2I | CCSGG | 5 cut(s) | 527, 545, 577, 881, 1162 |
| AsuHPI | GGTGA | 6 cut(s) | 11, 212, 637, 841, 931, 1274 |
| AsuII | TTCGAA | 1 cut(s) | 93 |
| AvaI | CYCGRG | 1 cut(s) | 281 |
| AvaII | GGWCC | 5 cut(s) | 36, 579, 1022, 1089, 1123 |
| AxyI | CCTNAGG | 1 cut(s) | 1215 |
| BanI | GGYRCC | 1 cut(s) | 934 |
| BanII | GRGCYC | 5 cut(s) | 177, 204, 591, 881, 1296 |
| Bbv12I | GWGCWC | 2 cut(s) | 177, 1296 |
| BbvI | GCAGC | 5 cut(s) | 549, 963, 1194, 1387, 1603 |
| BccI | CCATC | 3 cut(s) | 644, 910, 934 |
| BceAI | ACGGC | 2 cut(s) | 151, 550 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 345, 379, 539, 573 |
| BclI | TGATCA | 2 cut(s) | 16, 774 |
| BcnI | CCSGG | 5 cut(s) | 527, 545, 577, 881, 1162 |
| BcoDI | GTCTC | 1 cut(s) | 143 |
| BfmI | CTRYAG | 1 cut(s) | 1617 |
| BfoI | RGCGCY | 1 cut(s) | 1249 |
| BglII | AGATCT | 1 cut(s) | 1476 |
| BlpI | GCTNAGC | 2 cut(s) | 1042, 1356 |
| Bme1390I | CCNGG | 5 cut(s) | 527, 545, 577, 881, 1162 |
| Bme18I | GGWCC | 5 cut(s) | 36, 579, 1022, 1089, 1123 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 475 |
| BmeT110I | CYCGRG | 1 cut(s) | 281 |
| BmgBI | CACGTC | 2 cut(s) | 475, 688 |
| BmgT120I | GGNCC | 6 cut(s) | 36, 579, 1022, 1089, 1123, 1348 |
| BmiI | GGNNCC | 9 cut(s) | 580, 590, 936, 1023, 1024, 1090, 1125, 1350, 1471 |
| BmrFI | CCNGG | 5 cut(s) | 527, 545, 577, 881, 1162 |
| BmrI | ACTGGG | 1 cut(s) | 100 |
| BmsI | GCATC | 5 cut(s) | 303, 898, 949, 1182, 1387 |
| BmuI | ACTGGG | 1 cut(s) | 100 |
| BpmI | CTGGAG | 1 cut(s) | 233 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1042, 1356 |
| Bpu14I | TTCGAA | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 3 cut(s) | 974, 1609, 1621 |
| BpuMI | CCSGG | 5 cut(s) | 527, 545, 577, 881, 1162 |
| Bsa29I | ATCGAT | 2 cut(s) | 1278, 1309 |
| BsaBI | GATNNNNATC | 3 cut(s) | 773, 1115, 1172 |
| BsaHI | GRCGYC | 3 cut(s) | 231, 435, 552 |
| BsaI | GGTCTC | 1 cut(s) | 143 |
| BsaJI | CCNNGG | 4 cut(s) | 280, 339, 582, 1161 |
| BsaWI | WCCGGW | 1 cut(s) | 33 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 733, 912, 1133 |
| Bse118I | RCCGGY | 1 cut(s) | 143 |
| Bse1I | ACTGG | 3 cut(s) | 22, 106, 1138 |
| Bse21I | CCTNAGG | 1 cut(s) | 1215 |
| Bse3DI | GCAATG | 1 cut(s) | 834 |
| Bse8I | GATNNNNATC | 3 cut(s) | 773, 1115, 1172 |
| BseCI | ATCGAT | 2 cut(s) | 1278, 1309 |
| BseDI | CCNNGG | 4 cut(s) | 280, 339, 582, 1161 |
| BseGI | GGATG | 5 cut(s) | 57, 572, 655, 921, 964 |
| BseJI | GATNNNNATC | 3 cut(s) | 773, 1115, 1172 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 733, 912, 1133 |
| BseMI | GCAATG | 1 cut(s) | 834 |
| BseMII | CTCAG | 4 cut(s) | 766, 1098, 1206, 1347 |
| BseNI | ACTGG | 3 cut(s) | 22, 106, 1138 |
| BseRI | GAGGAG | 3 cut(s) | 233, 236, 695 |
| BseXI | GCAGC | 5 cut(s) | 549, 963, 1194, 1387, 1603 |
| BseYI | CCCAGC | 1 cut(s) | 463 |
| Bsh1236I | CGCG | 3 cut(s) | 194, 292, 317 |
| Bsh1285I | CGRYCG | 1 cut(s) | 858 |
| BshFI | GGCC | 4 cut(s) | 362, 1220, 1349, 1623 |
| BshNI | GGYRCC | 1 cut(s) | 934 |
| BshVI | ATCGAT | 2 cut(s) | 1278, 1309 |
| BsiEI | CGRYCG | 1 cut(s) | 858 |
| BsiHKAI | GWGCWC | 2 cut(s) | 177, 1296 |
| BsiHKCI | CYCGRG | 1 cut(s) | 281 |
| BsiSI | CCGG | 7 cut(s) | 34, 144, 527, 545, 576, 881, 1161 |
| BslFI | GGGAC | 4 cut(s) | 445, 592, 1035, 1102 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 733, 912, 1133 |
| BsmAI | GTCTC | 1 cut(s) | 143 |
| BsmFI | GGGAC | 4 cut(s) | 445, 592, 1035, 1102 |
| BsmI | GAATGC | 2 cut(s) | 216, 275 |
| BsnI | GGCC | 4 cut(s) | 362, 1220, 1349, 1623 |
| Bso31I | GGTCTC | 1 cut(s) | 143 |
| BsoBI | CYCGRG | 1 cut(s) | 281 |
| Bsp119I | TTCGAA | 1 cut(s) | 93 |
| Bsp1286I | GDGCHC | 5 cut(s) | 177, 204, 591, 881, 1296 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1042, 1356 |
| BspANI | GGCC | 4 cut(s) | 362, 1220, 1349, 1623 |
| BspCNI | CTCAG | 4 cut(s) | 765, 1099, 1207, 1348 |
| BspDI | ATCGAT | 2 cut(s) | 1278, 1309 |
| BspFNI | CGCG | 3 cut(s) | 194, 292, 317 |
| BspHI | TCATGA | 2 cut(s) | 676, 1191 |
| BspLI | GGNNCC | 9 cut(s) | 580, 590, 936, 1023, 1024, 1090, 1125, 1350, 1471 |
| BspMAI | CTGCAG | 1 cut(s) | 1621 |
| BspPI | GGATC | 2 cut(s) | 12, 685 |
| BspQI | GCTCTTC | 1 cut(s) | 1301 |
| BspT104I | TTCGAA | 1 cut(s) | 93 |
| BspT107I | GGYRCC | 1 cut(s) | 934 |
| BspTNI | GGTCTC | 1 cut(s) | 143 |
| BsrDI | GCAATG | 1 cut(s) | 834 |
| BsrFI | RCCGGY | 1 cut(s) | 143 |
| BsrI | ACTGG | 3 cut(s) | 22, 106, 1138 |
| BssAI | RCCGGY | 1 cut(s) | 143 |
| BssECI | CCNNGG | 4 cut(s) | 280, 339, 582, 1161 |
| BssNI | GRCGYC | 3 cut(s) | 231, 435, 552 |
| Bst4CI | ACNGT | 2 cut(s) | 1093, 1469 |
| Bst6I | CTCTTC | 2 cut(s) | 1301, 1479 |
| BstACI | GRCGYC | 3 cut(s) | 231, 435, 552 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 619 |
| BstBI | TTCGAA | 1 cut(s) | 93 |
| BstC8I | GCNNGC | 6 cut(s) | 336, 354, 800, 1084, 1614, 1621 |
| BstDEI | CTNAG | 6 cut(s) | 752, 972, 1042, 1107, 1215, 1356 |
| BstDSI | CCRYGG | 1 cut(s) | 582 |
| BstEII | GGTNACC | 4 cut(s) | 307, 625, 829, 1199 |
| BstF5I | GGATG | 5 cut(s) | 57, 572, 655, 921, 964 |
| BstFNI | CGCG | 3 cut(s) | 194, 292, 317 |
| BstH2I | RGCGCY | 1 cut(s) | 1249 |
| BstHHI | GCGC | 5 cut(s) | 294, 562, 640, 841, 1248 |
| BstMAI | GTCTC | 1 cut(s) | 143 |
| BstMCI | CGRYCG | 1 cut(s) | 858 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 144, 208, 619, 808, 847, 1179, 1252, 1613 |
| BstNSI | RCATGY | 1 cut(s) | 1086 |
| BstPI | GGTNACC | 4 cut(s) | 307, 625, 829, 1199 |
| BstSCI | CCNGG | 5 cut(s) | 525, 543, 575, 879, 1160 |
| BstSFI | CTRYAG | 1 cut(s) | 1617 |
| BstUI | CGCG | 3 cut(s) | 194, 292, 317 |
| BstV1I | GCAGC | 5 cut(s) | 549, 963, 1194, 1387, 1603 |
| BstX2I | RGATCY | 1 cut(s) | 1476 |
| BstYI | RGATCY | 1 cut(s) | 1476 |
| Bsu15I | ATCGAT | 2 cut(s) | 1278, 1309 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1215 |
| BsuRI | GGCC | 4 cut(s) | 362, 1220, 1349, 1623 |
| BsuTUI | ATCGAT | 2 cut(s) | 1278, 1309 |
| BtgI | CCRYGG | 1 cut(s) | 582 |
| BtrI | CACGTC | 2 cut(s) | 475, 688 |
| BtsCI | GGATG | 5 cut(s) | 57, 572, 655, 921, 964 |
| Cac8I | GCNNGC | 6 cut(s) | 336, 354, 800, 1084, 1614, 1621 |
| CciI | TCATGA | 2 cut(s) | 676, 1191 |
| CfoI | GCGC | 5 cut(s) | 294, 562, 640, 841, 1248 |
| Cfr10I | RCCGGY | 1 cut(s) | 143 |
| Cfr13I | GGNCC | 6 cut(s) | 36, 579, 1022, 1089, 1123, 1348 |
| ClaI | ATCGAT | 2 cut(s) | 1278, 1309 |
| CseI | GACGC | 1 cut(s) | 619 |
| Csp6I | GTAC | 2 cut(s) | 895, 1409 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1497, 1532 |
| CviAII | CATG | 7 cut(s) | 238, 445, 677, 778, 1083, 1192, 1369 |
| CviQI | GTAC | 2 cut(s) | 895, 1409 |
| DdeI | CTNAG | 6 cut(s) | 752, 972, 1042, 1107, 1215, 1356 |
| DraIII | CACNNNGTG | 1 cut(s) | 619 |
| DriI | GACNNNNNGTC | 1 cut(s) | 475 |
| Eam1104I | CTCTTC | 2 cut(s) | 1301, 1479 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 475 |
| EarI | CTCTTC | 2 cut(s) | 1301, 1479 |
| Ecl136II | GAGCTC | 2 cut(s) | 175, 1294 |
| Eco147I | AGGCCT | 2 cut(s) | 362, 1623 |
| Eco24I | GRGCYC | 5 cut(s) | 177, 204, 591, 881, 1296 |
| Eco31I | GGTCTC | 1 cut(s) | 143 |
| Eco47I | GGWCC | 5 cut(s) | 36, 579, 1022, 1089, 1123 |
| Eco47III | AGCGCT | 1 cut(s) | 1247 |
| Eco53kI | GAGCTC | 2 cut(s) | 175, 1294 |
| Eco81I | CCTNAGG | 1 cut(s) | 1215 |
| Eco88I | CYCGRG | 1 cut(s) | 281 |
| Eco91I | GGTNACC | 4 cut(s) | 307, 625, 829, 1199 |
| EcoICRI | GAGCTC | 2 cut(s) | 175, 1294 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1022 |
| EcoO65I | GGTNACC | 4 cut(s) | 307, 625, 829, 1199 |
| EcoRI | GAATTC | 1 cut(s) | 263 |
| EcoT38I | GRGCYC | 5 cut(s) | 177, 204, 591, 881, 1296 |
| FaeI | CATG | 7 cut(s) | 241, 448, 680, 781, 1086, 1195, 1372 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1188, 1220 |
| FaqI | GGGAC | 4 cut(s) | 445, 592, 1035, 1102 |
| FatI | CATG | 7 cut(s) | 237, 444, 676, 777, 1082, 1191, 1368 |
| FauI | CCCGC | 5 cut(s) | 190, 343, 1012, 1079, 1360 |
| FbaI | TGATCA | 2 cut(s) | 16, 774 |
| FblI | GTMKAC | 1 cut(s) | 402 |
| FokI | GGATG | 5 cut(s) | 44, 559, 662, 928, 971 |
| FriOI | GRGCYC | 5 cut(s) | 177, 204, 591, 881, 1296 |
| GlaI | GCGC | 5 cut(s) | 293, 561, 639, 840, 1247 |
| GsaI | CCCAGC | 1 cut(s) | 467 |
| GsuI | CTGGAG | 1 cut(s) | 233 |
| HaeII | RGCGCY | 1 cut(s) | 1249 |
| HaeIII | GGCC | 4 cut(s) | 362, 1220, 1349, 1623 |
| HapII | CCGG | 7 cut(s) | 34, 144, 527, 545, 576, 881, 1161 |
| HgaI | GACGC | 1 cut(s) | 619 |
| HhaI | GCGC | 5 cut(s) | 294, 562, 640, 841, 1248 |
| Hin1I | GRCGYC | 3 cut(s) | 231, 435, 552 |
| Hin1II | CATG | 7 cut(s) | 241, 448, 680, 781, 1086, 1195, 1372 |
| Hin6I | GCGC | 5 cut(s) | 292, 560, 638, 839, 1246 |
| HinP1I | GCGC | 5 cut(s) | 292, 560, 638, 839, 1246 |
| HincII | GTYRAC | 3 cut(s) | 403, 454, 609 |
| HindII | GTYRAC | 3 cut(s) | 403, 454, 609 |
| HinfI | GANTC | 2 cut(s) | 458, 750 |
| HpaII | CCGG | 7 cut(s) | 34, 144, 527, 545, 576, 881, 1161 |
| HphI | GGTGA | 6 cut(s) | 11, 212, 637, 841, 931, 1274 |
| Hpy166II | GTNNAC | 4 cut(s) | 403, 454, 609, 1123 |
| Hpy188I | TCNGA | 6 cut(s) | 496, 755, 855, 1178, 1396, 1483 |
| Hpy188III | TCNNGA | 6 cut(s) | 250, 439, 592, 677, 1192, 1588 |
| Hpy8I | GTNNAC | 4 cut(s) | 403, 454, 609, 1123 |
| HpyAV | CCTTC | 4 cut(s) | 80, 940, 1309, 1584 |
| HpyCH4III | ACNGT | 2 cut(s) | 1093, 1469 |
| HpyCH4IV | ACGT | 7 cut(s) | 168, 231, 399, 435, 474, 552, 687 |
| HpyCH4V | TGCA | 8 cut(s) | 781, 889, 1052, 1082, 1173, 1255, 1448, 1619 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 144, 208, 619, 808, 847, 1179, 1252, 1613 |
| HpyF3I | CTNAG | 6 cut(s) | 752, 972, 1042, 1107, 1215, 1356 |
| HpySE526I | ACGT | 7 cut(s) | 168, 231, 399, 435, 474, 552, 687 |
| Hsp92I | GRCGYC | 3 cut(s) | 231, 435, 552 |
| Hsp92II | CATG | 7 cut(s) | 241, 448, 680, 781, 1086, 1195, 1372 |
| HspAI | GCGC | 5 cut(s) | 292, 560, 638, 839, 1246 |
| KflI | GGGWCCC | 1 cut(s) | 1022 |
| Ksp22I | TGATCA | 2 cut(s) | 16, 774 |
| LguI | GCTCTTC | 1 cut(s) | 1301 |
| LmnI | GCTCC | 5 cut(s) | 246, 496, 594, 808, 949 |
| Lsp1109I | GCAGC | 5 cut(s) | 549, 963, 1194, 1387, 1603 |
| LweI | GCATC | 5 cut(s) | 303, 898, 949, 1182, 1387 |
| MaeII | ACGT | 7 cut(s) | 168, 231, 399, 435, 474, 552, 687 |
| MaeIII | GTNAC | 4 cut(s) | 307, 625, 829, 1199 |
| MboII | GAAGA | 4 cut(s) | 1126, 1288, 1496, 1540 |
| MflI | RGATCY | 1 cut(s) | 1476 |
| MhlI | GDGCHC | 5 cut(s) | 177, 204, 591, 881, 1296 |
| MluCI | AATT | 6 cut(s) | 263, 664, 730, 1437, 1533, 1630 |
| MlyI | GAGTC | 2 cut(s) | 467, 744 |
| MmeI | TCCRAC | 1 cut(s) | 786 |
| MroXI | GAANNNNTTC | 1 cut(s) | 323 |
| MseI | TTAA | 2 cut(s) | 132, 1206 |
| MslI | CAYNNNNRTG | 2 cut(s) | 12, 1260 |
| MspA1I | CMGCKG | 2 cut(s) | 509, 1355 |
| MspI | CCGG | 7 cut(s) | 34, 144, 527, 545, 576, 881, 1161 |
| MspR9I | CCNGG | 5 cut(s) | 527, 545, 577, 881, 1162 |
| Mva1269I | GAATGC | 2 cut(s) | 216, 275 |
| MvnI | CGCG | 3 cut(s) | 194, 292, 317 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 144, 208, 619, 808, 847, 1179, 1252, 1613 |
| NciI | CCSGG | 5 cut(s) | 527, 545, 577, 881, 1162 |
| NlaIII | CATG | 7 cut(s) | 241, 448, 680, 781, 1086, 1195, 1372 |
| NlaIV | GGNNCC | 9 cut(s) | 580, 590, 936, 1023, 1024, 1090, 1125, 1350, 1471 |
| NmeAIII | GCCGAG | 2 cut(s) | 192, 364 |
| NmuCI | GTSAC | 2 cut(s) | 625, 829 |
| NspI | RCATGY | 1 cut(s) | 1086 |
| NspV | TTCGAA | 1 cut(s) | 93 |
| OliI | CACNNNNGTG | 1 cut(s) | 1260 |
| PaeI | GCATGC | 1 cut(s) | 1086 |
| PagI | TCATGA | 2 cut(s) | 676, 1191 |
| PceI | AGGCCT | 2 cut(s) | 362, 1623 |
| PciSI | GCTCTTC | 1 cut(s) | 1301 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 168, 590 |
| PctI | GAATGC | 2 cut(s) | 216, 275 |
| PdmI | GAANNNNTTC | 1 cut(s) | 323 |
| PflFI | GACNNNGTC | 3 cut(s) | 233, 407, 551 |
| PfoI | TCCNGGA | 1 cut(s) | 575 |
| Ple19I | CGATCG | 1 cut(s) | 858 |
| PleI | GAGTC | 2 cut(s) | 466, 744 |
| PpsI | GAGTC | 2 cut(s) | 466, 744 |
| PpuMI | RGGWCCY | 1 cut(s) | 1022 |
| Psp124BI | GAGCTC | 2 cut(s) | 177, 1296 |
| Psp5II | RGGWCCY | 1 cut(s) | 1022 |
| PspEI | GGTNACC | 4 cut(s) | 307, 625, 829, 1199 |
| PspFI | CCCAGC | 1 cut(s) | 463 |
| PspN4I | GGNNCC | 9 cut(s) | 580, 590, 936, 1023, 1024, 1090, 1125, 1350, 1471 |
| PspPI | GGNCC | 6 cut(s) | 36, 579, 1022, 1089, 1123, 1348 |
| PspPPI | RGGWCCY | 1 cut(s) | 1022 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 311, 343 |
| PstI | CTGCAG | 1 cut(s) | 1621 |
| PsuI | RGATCY | 1 cut(s) | 1476 |
| PsyI | GACNNNGTC | 3 cut(s) | 233, 407, 551 |
| PvuI | CGATCG | 1 cut(s) | 858 |
| RsaI | GTAC | 2 cut(s) | 896, 1410 |
| RsaNI | GTAC | 2 cut(s) | 895, 1409 |
| RseI | CAYNNNNRTG | 2 cut(s) | 12, 1260 |
| SacI | GAGCTC | 2 cut(s) | 177, 1296 |
| SalI | GTCGAC | 1 cut(s) | 401 |
| SapI | GCTCTTC | 1 cut(s) | 1301 |
| SaqAI | TTAA | 2 cut(s) | 132, 1206 |
| Sau96I | GGNCC | 6 cut(s) | 36, 579, 1022, 1089, 1123, 1348 |
| SchI | GAGTC | 2 cut(s) | 467, 744 |
| ScrFI | CCNGG | 5 cut(s) | 527, 545, 577, 881, 1162 |
| SduI | GDGCHC | 5 cut(s) | 177, 204, 591, 881, 1296 |
| SfaNI | GCATC | 5 cut(s) | 303, 898, 949, 1182, 1387 |
| SfcI | CTRYAG | 1 cut(s) | 1617 |
| SfuI | TTCGAA | 1 cut(s) | 93 |
| SgrAI | CRCCGGYG | 1 cut(s) | 143 |
| SinI | GGWCC | 5 cut(s) | 36, 579, 1022, 1089, 1123 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 12, 1260 |
| SmlI | CTYRAG | 3 cut(s) | 953, 1588, 1600 |
| SmoI | CTYRAG | 3 cut(s) | 953, 1588, 1600 |
| SphI | GCATGC | 1 cut(s) | 1086 |
| Sse9I | AATT | 6 cut(s) | 263, 664, 730, 1437, 1533, 1630 |
| SseBI | AGGCCT | 2 cut(s) | 362, 1623 |
| SstI | GAGCTC | 2 cut(s) | 177, 1296 |
| StuI | AGGCCT | 2 cut(s) | 362, 1623 |
| StyD4I | CCNGG | 5 cut(s) | 525, 543, 575, 879, 1160 |
| TaaI | ACNGT | 2 cut(s) | 1093, 1469 |
| TaiI | ACGT | 7 cut(s) | 171, 234, 402, 438, 477, 555, 690 |
| TaqI | TCGA | 8 cut(s) | 93, 171, 204, 365, 402, 908, 1278, 1309 |
| TasI | AATT | 6 cut(s) | 263, 664, 730, 1437, 1533, 1630 |
| TauI | GCSGC | 5 cut(s) | 197, 305, 767, 935, 1430 |
| Tru1I | TTAA | 2 cut(s) | 132, 1206 |
| Tru9I | TTAA | 2 cut(s) | 132, 1206 |
| TseFI | GTSAC | 2 cut(s) | 625, 829 |
| TseI | GCWGC | 5 cut(s) | 562, 976, 1182, 1400, 1616 |
| Tsp45I | GTSAC | 2 cut(s) | 625, 829 |
| TspGWI | ACGGA | 1 cut(s) | 928 |
| Tth111I | GACNNNGTC | 3 cut(s) | 233, 407, 551 |
| VpaK11BI | GGWCC | 5 cut(s) | 36, 579, 1022, 1089, 1123 |
| XapI | RAATTY | 3 cut(s) | 263, 664, 1437 |
| XceI | RCATGY | 1 cut(s) | 1086 |
| XmiI | GTMKAC | 1 cut(s) | 402 |
| XmnI | GAANNNNTTC | 1 cut(s) | 323 |
| ZraI | GACGTC | 3 cut(s) | 232, 436, 553 |