Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001962

Physical Location & Seq

Genomic Coordinates Forward (+)

18843108 .. 18847877

Gene Structure 4770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00347470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGAGAACAAACAAGACAGTCACGAATTCATTTTCCGTTCAAAGCTGCCGGACATTTACATCCCGAACCACCTCCCTCTCCACACCTACTGCTTCGAGAACATCTCCCAATTCCATGACCGTCCCTGCCTGATCAACGGCAACACCGGCGAGACCTTCACTTATGCCGACGTCGAGCTCACCTCCCGCAGAGTCGCCGCCGGTCTCGACAAGCTCGGCATTCATCAGGGCGACGTCGTCATGCTCCTGCTCCAAAACTGTCCCGAGTTCGCCTTCGCATTCCTCGGCGCCTCTTACGTCGGAGGCATCATCACTACGGCGAACCCCTTCTACACTCCGGCCGAGGTCGCCAAGCAAGCCACTGCCTCCAACGCCAAGCTGATCATAACTCAAGCGGCCTACGTGGACAAGGTGAAGGACTTTGCCAAACTCAACAACGTTAAACTCATGTGCGTGGATGAGACTTCGTCGTTATCAGAGGATGTGTTTCATTTCTCCCAGCTGACGGCGGCTGACGAGAGCGAAACCCCGGCGGTGAAAATCAACCCGGACGACGTGGTGGCGCTGCCGTACTCGTCGGGGACGACGGGGCTGCCGAAAGGGGTGATGCTGACGCACAAGGGGTTGGTGACGAGCGTGGCGCAGCAGGTGGACGGCGAAAACCCAAACCTCTACTTTCACAAGGAGGACGTGATCCTCTGCGTGCTGCCGTTGTTCCACATCTACTCCCTCAACTCGGTGTTCCTCTGCGGACTCCGCGTCGGAGCGACGATCCTGATCATGCAGAGGTTTGAGATCAACAAGTTGTTGGAATTGGTGGAAAAGGAAAAGGTGACTATTGCGCCGTTTGTGCCTCCGATTGTTTTGAACATCGCCAAGAGTCCGGACCTGCACCGGTACGACTTGTCGTCGATTCGGATGGTGATGTCCGGGGCGGCTCCGATGGGGAAGGAACTCGAGGACACTGTCAGGGCTAAACTGCCCAATGCCAAACTCGGACAGGGTTATGGGATGACTGAGGCTGGACCAGTTCTATCCATGTGCTTGGCATTTGCAAAAGAACCCTATGAGATAAAATCAGGTGCGTGCGGGACCGTCGTAAGAAATGCTGAGATGAAGATCATCGACCCCGACACCAATGAATCCCTTCCCCGAAACCAATCAGGAGAGATTTGCATCCGAGGTAGCCAAATCATGAAAGGATATCTGAATGACCCTGAGGCGACTGAGAGGACCATAGACAAAGAAGGATGGTTACACACAGGTGATATAGGGTACATCGATGATGACGATGAGCTCTTCATCGTTGACCGTTTAAAAGAACTCATTAAATACAAAGGTTTCCAAGTCGCACCGGCTGAGCTCGAAGCCATGTTGATCTCCCATCCCAACCTTTCCGATGCTGCTGTAGTGCCGATGAAGGATGAGGCTGCAGGAGAGGTTCCTATTGCATTTGTTGTAAGATCAAACGGTTCCAAGATATCTGAGGATGACATTAAGCAATACATATCAAAACAGGTGGTGTTCTACAAGAGAATAAGTAGGGTTTTCTTCACAGACAAAATCCCAAAAGCTCCTTCTGGCAAAATATTGAGGAAAGACTTGAGAGCAAGGCTGGCTGCAGGCCTACCCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

545

Amino Acids

60.12

Weight (kDa)

5.58

Isoelectric Point (pI)

32.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	33 - 403	2.1e-101	AMP-binding enzyme
AMP-binding_C	PF13193	454 - 529	1.3e-16	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51680 AT1G51680 AT1G51680 AT3G21240 AT3G21240 AT3G21240
fragaria_vesca	FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940
malus_domestica	MD13G1257800.v1.1 MD17G1229400.v1.1
prunus_persica	Prupe.1G087900_v2.0.a1 Prupe.3G107300_v2.0.a1
pyrus_communis	pycom13g22250 pycom17g23190
rosa_chinensis	RchiOBHm_Chr2g0131501 RchiOBHm_Chr4g0402711 RchiOBHm_Chr5g0057551
rosa_laevigata	RLG00000009052 RLG00000019189
rosa_multiflora	Rmu_co7959539.1_g000001 Rmu_sc0000329.1_g000003 Rmu_sc0002230.1_g000020 Rmu_sc0002451.1_g000001 Rmu_sc0002808.1_g000009
rosa_roxburghii	Rroxscaffold_2G00112820 Rroxscaffold_5G00347470
rosa_rugosa	Rorug02G0297600 Rorug04G0037900
rosa_samantha	Rh2AG350900 Rh2BG357400 Rh2CG336600 Rh2DG375300 Rh4AG115500 Rh4CG122400 Rh4DG108000
rosa_wichuraiana	Rw2G028470 Rw4G009230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	637
AatII	GACGTC	2 cut(s)	174, 237
Acc36I	ACCTGC	2 cut(s)	637, 897
AccB1I	GGYRCC	1 cut(s)	287
AccII	CGCG	1 cut(s)	759
AccIII	TCCGGA	1 cut(s)	883
AciI	CCGC	9 cut(s)	187, 198, 395, 509, 533, 750, 757, 935, 1089
AclI	AACGTT	1 cut(s)	438
AclWI	GGATC	2 cut(s)	688, 766
AcoI	YGGCCR	1 cut(s)	339
AcsI	RAATTY	1 cut(s)	26
AcyI	GRCGYC	3 cut(s)	171, 234, 288
AfaI	GTAC	3 cut(s)	572, 899, 1277
AfiI	CCNNNNNNNGG	2 cut(s)	505, 736
AgeI	ACCGGT	1 cut(s)	894
AgsI	TTSAA	2 cut(s)	42, 868
AhdI	GACNNNNNGTC	2 cut(s)	758, 907
AjiI	CACGTC	2 cut(s)	556, 691
AjuI	GAANNNNNNNTTGG	2 cut(s)	1561, 1593
AleI	CACNNNNGTG	1 cut(s)	1263
AluBI	AGCT	8 cut(s)	46, 178, 214, 379, 502, 1297, 1363, 1574
AluI	AGCT	8 cut(s)	46, 178, 214, 379, 502, 1297, 1363, 1574
Alw21I	GWGCWC	3 cut(s)	180, 1299, 1365
Alw26I	GTCTC	3 cut(s)	146, 209, 455
AlwI	GGATC	2 cut(s)	688, 766
Ama87I	CYCGRG	2 cut(s)	263, 956
Aor13HI	TCCGGA	1 cut(s)	883
AoxI	GGCC	3 cut(s)	339, 396, 1624
ApeKI	GCWGC	8 cut(s)	46, 565, 592, 643, 706, 1403, 1430, 1619
ApoI	RAATTY	1 cut(s)	26
AsiGI	ACCGGT	1 cut(s)	894
Asp700I	GAANNNNTTC	2 cut(s)	326, 1146
AspLEI	GCGC	4 cut(s)	290, 565, 643, 844
AspS9I	GGNCC	4 cut(s)	886, 1025, 1092, 1233
AsuC2I	CCSGG	3 cut(s)	530, 548, 931
AsuHPI	GGTGA	8 cut(s)	172, 424, 547, 616, 640, 844, 934, 1277
AvaI	CYCGRG	2 cut(s)	263, 956
AvaII	GGWCC	4 cut(s)	886, 1025, 1092, 1233
AxyI	CCTNAGG	1 cut(s)	1218
BanI	GGYRCC	1 cut(s)	287
BanII	GRGCYC	3 cut(s)	180, 1299, 1365
BarI	GAAGNNNNNNTAC	2 cut(s)	1239, 1271
Bbv12I	GWGCWC	3 cut(s)	180, 1299, 1365
BbvI	GCAGC	8 cut(s)	33, 552, 579, 655, 693, 1390, 1417, 1606
BccI	CCATC	4 cut(s)	913, 937, 1245, 1392
BceAI	ACGGC	7 cut(s)	154, 333, 522, 553, 670, 694, 829
BcgI	CGANNNNNNTGC	2 cut(s)	574, 608
BclI	TGATCA	3 cut(s)	132, 381, 777
BcnI	CCSGG	3 cut(s)	530, 548, 931
BcoDI	GTCTC	3 cut(s)	146, 209, 455
BfaI	CTAG	1 cut(s)	1636
BfmI	CTRYAG	3 cut(s)	1407, 1431, 1620
BfoI	RGCGCY	2 cut(s)	291, 566
BfuAI	ACCTGC	2 cut(s)	637, 897
BlpI	GCTNAGC	1 cut(s)	1359
Bme1390I	CCNGG	3 cut(s)	530, 548, 931
Bme18I	GGWCC	4 cut(s)	886, 1025, 1092, 1233
BmeRI	GACNNNNNGTC	2 cut(s)	758, 907
BmeT110I	CYCGRG	2 cut(s)	263, 956
BmgBI	CACGTC	2 cut(s)	556, 691
BmgT120I	GGNCC	4 cut(s)	886, 1025, 1092, 1233
BmiI	GGNNCC	5 cut(s)	289, 939, 1093, 1443, 1474
BmrFI	CCNGG	3 cut(s)	530, 548, 931
BmsI	GCATC	4 cut(s)	315, 597, 1185, 1390
BplI	GAGNNNNNCTC	4 cut(s)	89, 121, 167, 199
Bpu1102I	GCTNAGC	1 cut(s)	1359
BpuEI	CTTGAG	2 cut(s)	375, 1624
BpuMI	CCSGG	3 cut(s)	530, 548, 931
Bsa29I	ATCGAT	1 cut(s)	1281
BsaAI	YACGTR	1 cut(s)	403
BsaBI	GATNNNNATC	3 cut(s)	776, 1118, 1175
BsaHI	GRCGYC	3 cut(s)	171, 234, 288
BsaI	GGTCTC	2 cut(s)	146, 209
BsaJI	CCNNGG	5 cut(s)	283, 342, 528, 930, 1180
BsaWI	WCCGGW	2 cut(s)	883, 894
BsaXI	ACNNNNNCTCC	2 cut(s)	710, 740
Bsc4I	CCNNNNNNNGG	2 cut(s)	505, 736
Bse118I	RCCGGY	4 cut(s)	146, 200, 894, 1354
Bse1I	ACTGG	1 cut(s)	1028
Bse21I	CCTNAGG	1 cut(s)	1218
Bse8I	GATNNNNATC	3 cut(s)	776, 1118, 1175
BseAI	TCCGGA	1 cut(s)	883
BseCI	ATCGAT	1 cut(s)	1281
BseDI	CCNNGG	5 cut(s)	283, 342, 528, 930, 1180
BseJI	GATNNNNATC	3 cut(s)	776, 1118, 1175
BseLI	CCNNNNNNNGG	2 cut(s)	505, 736
BseMII	CTCAG	6 cut(s)	1008, 1101, 1209, 1218, 1350, 1476
BseNI	ACTGG	1 cut(s)	1028
BseX3I	CGGCCG	1 cut(s)	339
BseXI	GCAGC	8 cut(s)	33, 552, 579, 655, 693, 1390, 1417, 1606
BseYI	CCCAGC	1 cut(s)	498
BsgI	GTGCAG	1 cut(s)	875
Bsh1236I	CGCG	1 cut(s)	759
Bsh1285I	CGRYCG	1 cut(s)	342
BshFI	GGCC	3 cut(s)	341, 398, 1626
BshNI	GGYRCC	1 cut(s)	287
BshTI	ACCGGT	1 cut(s)	894
BshVI	ATCGAT	1 cut(s)	1281
BsiEI	CGRYCG	1 cut(s)	342
BsiHKAI	GWGCWC	3 cut(s)	180, 1299, 1365
BsiHKCI	CYCGRG	2 cut(s)	263, 956
BslFI	GGGAC	4 cut(s)	108, 246, 595, 1105
BslI	CCNNNNNNNGG	2 cut(s)	505, 736
BsmAI	GTCTC	3 cut(s)	146, 209, 455
BsmFI	GGGAC	4 cut(s)	108, 246, 595, 1105
BsmI	GAATGC	2 cut(s)	219, 278
BsnI	GGCC	3 cut(s)	341, 398, 1626
Bso31I	GGTCTC	2 cut(s)	146, 209
BsoBI	CYCGRG	2 cut(s)	263, 956
Bsp1286I	GDGCHC	3 cut(s)	180, 1299, 1365
Bsp13I	TCCGGA	1 cut(s)	883
Bsp143I	GATC	9 cut(s)	132, 381, 693, 771, 777, 795, 1119, 1377, 1463
Bsp1720I	GCTNAGC	1 cut(s)	1359
BspACI	CCGC	9 cut(s)	187, 198, 395, 509, 533, 750, 757, 935, 1089
BspANI	GGCC	3 cut(s)	341, 398, 1626
BspCNI	CTCAG	6 cut(s)	1009, 1102, 1210, 1219, 1351, 1477
BspDI	ATCGAT	1 cut(s)	1281
BspEI	TCCGGA	1 cut(s)	883
BspFNI	CGCG	1 cut(s)	759
BspHI	TCATGA	1 cut(s)	1194
BspLI	GGNNCC	5 cut(s)	289, 939, 1093, 1443, 1474
BspMAI	CTGCAG	2 cut(s)	1435, 1624
BspMI	ACCTGC	2 cut(s)	637, 897
BspPI	GGATC	2 cut(s)	688, 766
BspQI	GCTCTTC	1 cut(s)	1304
BspT107I	GGYRCC	1 cut(s)	287
BspTNI	GGTCTC	2 cut(s)	146, 209
BsrFI	RCCGGY	4 cut(s)	146, 200, 894, 1354
BsrI	ACTGG	1 cut(s)	1028
BssAI	RCCGGY	4 cut(s)	146, 200, 894, 1354
BssECI	CCNNGG	5 cut(s)	283, 342, 528, 930, 1180
BssMI	GATC	9 cut(s)	132, 381, 693, 771, 777, 795, 1119, 1377, 1463
BssNI	GRCGYC	3 cut(s)	171, 234, 288
Bst4CI	ACNGT	7 cut(s)	20, 122, 260, 967, 1096, 1313, 1472
Bst6I	CTCTTC	1 cut(s)	1304
BstACI	GRCGYC	3 cut(s)	171, 234, 288
BstBAI	YACGTR	1 cut(s)	403
BstC8I	GCNNGC	5 cut(s)	357, 704, 1087, 1617, 1624
BstDEI	CTNAG	6 cut(s)	1017, 1110, 1218, 1227, 1359, 1485
BstFNI	CGCG	1 cut(s)	759
BstH2I	RGCGCY	2 cut(s)	291, 566
BstHHI	GCGC	4 cut(s)	290, 565, 643, 844
BstKTI	GATC	9 cut(s)	135, 384, 696, 774, 780, 798, 1122, 1380, 1466
BstMAI	GTCTC	3 cut(s)	146, 209, 455
BstMBI	GATC	9 cut(s)	132, 381, 693, 771, 777, 795, 1119, 1377, 1463
BstMCI	CGRYCG	1 cut(s)	342
BstMWI	GCNNNNNNNGC	7 cut(s)	147, 347, 356, 371, 756, 850, 1616
BstSCI	CCNGG	3 cut(s)	528, 546, 929
BstSFI	CTRYAG	3 cut(s)	1407, 1431, 1620
BstUI	CGCG	1 cut(s)	759
BstV1I	GCAGC	8 cut(s)	33, 552, 579, 655, 693, 1390, 1417, 1606
BstXI	CCANNNNNNTGG	1 cut(s)	1045
BstZI	CGGCCG	1 cut(s)	339
Bsu15I	ATCGAT	1 cut(s)	1281
Bsu36I	CCTNAGG	1 cut(s)	1218
BsuRI	GGCC	3 cut(s)	341, 398, 1626
BsuTUI	ATCGAT	1 cut(s)	1281
BtgZI	GCGATG	1 cut(s)	856
BtrI	CACGTC	2 cut(s)	556, 691
BtsI	GCAGTG	1 cut(s)	360
BtsIMutI	CAGTG	2 cut(s)	360, 963
BveI	ACCTGC	2 cut(s)	637, 897
Cac8I	GCNNGC	5 cut(s)	357, 704, 1087, 1617, 1624
CciI	TCATGA	1 cut(s)	1194
CfoI	GCGC	4 cut(s)	290, 565, 643, 844
Cfr10I	RCCGGY	4 cut(s)	146, 200, 894, 1354
Cfr13I	GGNCC	4 cut(s)	886, 1025, 1092, 1233
ClaI	ATCGAT	1 cut(s)	1281
CseI	GACGC	2 cut(s)	622, 748
Csp6I	GTAC	3 cut(s)	571, 898, 1276
CspAI	ACCGGT	1 cut(s)	894
CspCI	CAANNNNNGTGG	2 cut(s)	1500, 1535
CviAII	CATG	7 cut(s)	116, 241, 448, 781, 1039, 1195, 1372
CviQI	GTAC	3 cut(s)	571, 898, 1276
DdeI	CTNAG	6 cut(s)	1017, 1110, 1218, 1227, 1359, 1485
DinI	GGCGCC	1 cut(s)	289
DpnI	GATC	9 cut(s)	134, 383, 695, 773, 779, 797, 1121, 1379, 1465
DpnII	GATC	9 cut(s)	132, 381, 693, 771, 777, 795, 1119, 1377, 1463
DraI	TTTAAA	1 cut(s)	1317
DriI	GACNNNNNGTC	2 cut(s)	758, 907
EaeI	YGGCCR	1 cut(s)	339
EagI	CGGCCG	1 cut(s)	339
Eam1104I	CTCTTC	1 cut(s)	1304
Eam1105I	GACNNNNNGTC	2 cut(s)	758, 907
EarI	CTCTTC	1 cut(s)	1304
Ecl136II	GAGCTC	3 cut(s)	178, 1297, 1363
EclXI	CGGCCG	1 cut(s)	339
Eco147I	AGGCCT	1 cut(s)	1626
Eco24I	GRGCYC	3 cut(s)	180, 1299, 1365
Eco31I	GGTCTC	2 cut(s)	146, 209
Eco32I	GATATC	2 cut(s)	1205, 1482
Eco47I	GGWCC	4 cut(s)	886, 1025, 1092, 1233
Eco52I	CGGCCG	1 cut(s)	339
Eco53kI	GAGCTC	3 cut(s)	178, 1297, 1363
Eco81I	CCTNAGG	1 cut(s)	1218
Eco88I	CYCGRG	2 cut(s)	263, 956
EcoICRI	GAGCTC	3 cut(s)	178, 1297, 1363
EcoRI	GAATTC	1 cut(s)	26
EcoRV	GATATC	2 cut(s)	1205, 1482
EcoT38I	GRGCYC	3 cut(s)	180, 1299, 1365
EgeI	GGCGCC	1 cut(s)	289
EheI	GGCGCC	1 cut(s)	289
FaeI	CATG	7 cut(s)	119, 244, 451, 784, 1042, 1198, 1375
FaqI	GGGAC	4 cut(s)	108, 246, 595, 1105
FatI	CATG	7 cut(s)	115, 240, 447, 780, 1038, 1194, 1371
FauI	CCCGC	2 cut(s)	194, 1082
FbaI	TGATCA	3 cut(s)	132, 381, 777
FriOI	GRGCYC	3 cut(s)	180, 1299, 1365
FspBI	CTAG	1 cut(s)	1636
GlaI	GCGC	4 cut(s)	289, 564, 642, 843
GsaI	CCCAGC	1 cut(s)	502
HaeII	RGCGCY	2 cut(s)	291, 566
HaeIII	GGCC	3 cut(s)	341, 398, 1626
HgaI	GACGC	2 cut(s)	622, 748
HhaI	GCGC	4 cut(s)	290, 565, 643, 844
Hin1I	GRCGYC	3 cut(s)	171, 234, 288
Hin1II	CATG	7 cut(s)	119, 244, 451, 784, 1042, 1198, 1375
Hin6I	GCGC	4 cut(s)	288, 563, 641, 842
HinP1I	GCGC	4 cut(s)	288, 563, 641, 842
HincII	GTYRAC	1 cut(s)	1309
HindII	GTYRAC	1 cut(s)	1309
HinfI	GANTC	5 cut(s)	192, 753, 880, 913, 1142
HphI	GGTGA	8 cut(s)	172, 424, 547, 616, 640, 844, 934, 1277
Hpy166II	GTNNAC	3 cut(s)	406, 652, 1309
Hpy188III	TCNNGA	9 cut(s)	23, 64, 97, 206, 263, 775, 884, 1164, 1195
Hpy8I	GTNNAC	3 cut(s)	406, 652, 1309
HpyAV	CCTTC	9 cut(s)	166, 283, 337, 409, 943, 1157, 1241, 1414, 1587
HpyCH4III	ACNGT	7 cut(s)	20, 122, 260, 967, 1096, 1313, 1472
HpyCH4IV	ACGT	7 cut(s)	171, 234, 297, 402, 438, 555, 690
HpyCH4V	TGCA	7 cut(s)	784, 892, 1055, 1176, 1433, 1451, 1622
HpyF10VI	GCNNNNNNNGC	7 cut(s)	147, 347, 356, 371, 756, 850, 1616
HpyF3I	CTNAG	6 cut(s)	1017, 1110, 1218, 1227, 1359, 1485
HpySE526I	ACGT	7 cut(s)	171, 234, 297, 402, 438, 555, 690
Hsp92I	GRCGYC	3 cut(s)	171, 234, 288
Hsp92II	CATG	7 cut(s)	119, 244, 451, 784, 1042, 1198, 1375
HspAI	GCGC	4 cut(s)	288, 563, 641, 842
KasI	GGCGCC	1 cut(s)	287
Kpn2I	TCCGGA	1 cut(s)	883
Ksp22I	TGATCA	3 cut(s)	132, 381, 777
Kzo9I	GATC	9 cut(s)	132, 381, 693, 771, 777, 795, 1119, 1377, 1463
LguI	GCTCTTC	1 cut(s)	1304
LmnI	GCTCC	5 cut(s)	249, 255, 764, 943, 1579
Lsp1109I	GCAGC	8 cut(s)	33, 552, 579, 655, 693, 1390, 1417, 1606
LweI	GCATC	4 cut(s)	315, 597, 1185, 1390
MaeI	CTAG	1 cut(s)	1636
MaeII	ACGT	7 cut(s)	171, 234, 297, 402, 438, 555, 690
MaeIII	GTNAC	4 cut(s)	20, 628, 832, 1254
MalI	GATC	9 cut(s)	134, 383, 695, 773, 779, 797, 1121, 1379, 1465
MboI	GATC	9 cut(s)	132, 381, 693, 771, 777, 795, 1119, 1377, 1463
MboII	GAAGA	3 cut(s)	1129, 1291, 1543
MhlI	GDGCHC	3 cut(s)	180, 1299, 1365
MluCI	AATT	3 cut(s)	26, 110, 812
Mly113I	GGCGCC	1 cut(s)	288
MlyI	GAGTC	3 cut(s)	201, 747, 889
MmeI	TCCRAC	4 cut(s)	280, 393, 742, 789
MroI	TCCGGA	1 cut(s)	883
MroXI	GAANNNNTTC	2 cut(s)	326, 1146
MseI	TTAA	4 cut(s)	441, 1316, 1329, 1497
MslI	CAYNNNNRTG	2 cut(s)	452, 1263
MspA1I	CMGCKG	1 cut(s)	502
MspR9I	CCNGG	3 cut(s)	530, 548, 931
Mva1269I	GAATGC	2 cut(s)	219, 278
MvnI	CGCG	1 cut(s)	759
MwoI	GCNNNNNNNGC	7 cut(s)	147, 347, 356, 371, 756, 850, 1616
NarI	GGCGCC	1 cut(s)	288
NciI	CCSGG	3 cut(s)	530, 548, 931
NdeII	GATC	9 cut(s)	132, 381, 693, 771, 777, 795, 1119, 1377, 1463
NlaIII	CATG	7 cut(s)	119, 244, 451, 784, 1042, 1198, 1375
NlaIV	GGNNCC	5 cut(s)	289, 939, 1093, 1443, 1474
NmeAIII	GCCGAG	3 cut(s)	195, 264, 367
NmuCI	GTSAC	3 cut(s)	20, 628, 832
OliI	CACNNNNGTG	1 cut(s)	1263
PaeR7I	CTCGAG	1 cut(s)	956
PagI	TCATGA	1 cut(s)	1194
PaqCI	CACCTGC	1 cut(s)	637
PceI	AGGCCT	1 cut(s)	1626
PciSI	GCTCTTC	1 cut(s)	1304
PcsI	WCGNNNNNNNCGW	3 cut(s)	581, 593, 1287
PctI	GAATGC	2 cut(s)	219, 278
PdmI	GAANNNNTTC	2 cut(s)	326, 1146
PfeI	GAWTC	2 cut(s)	913, 1142
PflFI	GACNNNGTC	3 cut(s)	236, 466, 965
PinAI	ACCGGT	1 cut(s)	894
PleI	GAGTC	3 cut(s)	200, 747, 888
PluTI	GGCGCC	1 cut(s)	291
PpsI	GAGTC	3 cut(s)	200, 747, 888
Ppu21I	YACGTR	1 cut(s)	403
Psp124BI	GAGCTC	3 cut(s)	180, 1299, 1365
Psp1406I	AACGTT	1 cut(s)	438
PspFI	CCCAGC	1 cut(s)	498
PspN4I	GGNNCC	5 cut(s)	289, 939, 1093, 1443, 1474
PspPI	GGNCC	4 cut(s)	886, 1025, 1092, 1233
PspXI	VCTCGAGB	1 cut(s)	956
PsrI	GAACNNNNNNTAC	2 cut(s)	314, 346
PstI	CTGCAG	2 cut(s)	1435, 1624
PsyI	GACNNNGTC	3 cut(s)	236, 466, 965
PvuII	CAGCTG	1 cut(s)	502
RsaI	GTAC	3 cut(s)	572, 899, 1277
RsaNI	GTAC	3 cut(s)	571, 898, 1276
RseI	CAYNNNNRTG	2 cut(s)	452, 1263
SacI	GAGCTC	3 cut(s)	180, 1299, 1365
SapI	GCTCTTC	1 cut(s)	1304
SaqAI	TTAA	4 cut(s)	441, 1316, 1329, 1497
Sau3AI	GATC	9 cut(s)	132, 381, 693, 771, 777, 795, 1119, 1377, 1463
Sau96I	GGNCC	4 cut(s)	886, 1025, 1092, 1233
SchI	GAGTC	3 cut(s)	201, 747, 889
ScrFI	CCNGG	3 cut(s)	530, 548, 931
SduI	GDGCHC	3 cut(s)	180, 1299, 1365
SfaNI	GCATC	4 cut(s)	315, 597, 1185, 1390
SfcI	CTRYAG	3 cut(s)	1407, 1431, 1620
SfoI	GGCGCC	1 cut(s)	289
Sfr274I	CTCGAG	1 cut(s)	956
SgrAI	CRCCGGYG	1 cut(s)	146
SinI	GGWCC	4 cut(s)	886, 1025, 1092, 1233
SlaI	CTCGAG	1 cut(s)	956
SmiMI	CAYNNNNRTG	2 cut(s)	452, 1263
SmlI	CTYRAG	3 cut(s)	390, 956, 1603
SmoI	CTYRAG	3 cut(s)	390, 956, 1603
Sse9I	AATT	3 cut(s)	26, 110, 812
SseBI	AGGCCT	1 cut(s)	1626
SsiI	CCGC	9 cut(s)	187, 198, 395, 509, 533, 750, 757, 935, 1089
SspDI	GGCGCC	1 cut(s)	287
SspI	AATATT	1 cut(s)	1590
SspMI	CTAG	1 cut(s)	1636
SstI	GAGCTC	3 cut(s)	180, 1299, 1365
StuI	AGGCCT	1 cut(s)	1626
StyD4I	CCNGG	3 cut(s)	528, 546, 929
TaaI	ACNGT	7 cut(s)	20, 122, 260, 967, 1096, 1313, 1472
TaiI	ACGT	7 cut(s)	174, 237, 300, 405, 441, 558, 693
TaqI	TCGA	8 cut(s)	96, 174, 207, 911, 957, 1125, 1281, 1365
TasI	AATT	3 cut(s)	26, 110, 812
TauI	GCSGC	4 cut(s)	200, 398, 512, 938
TfiI	GAWTC	2 cut(s)	913, 1142
Tru1I	TTAA	4 cut(s)	441, 1316, 1329, 1497
Tru9I	TTAA	4 cut(s)	441, 1316, 1329, 1497
TscAI	CASTG	2 cut(s)	367, 970
TseFI	GTSAC	3 cut(s)	20, 628, 832
TseI	GCWGC	8 cut(s)	46, 565, 592, 643, 706, 1403, 1430, 1619
Tsp45I	GTSAC	3 cut(s)	20, 628, 832
TspDTI	ATGAA	8 cut(s)	19, 212, 479, 1130, 1155, 1211, 1291, 1433
TspGWI	ACGGA	1 cut(s)	26
TspRI	CASTG	2 cut(s)	367, 970
Tth111I	GACNNNGTC	3 cut(s)	236, 466, 965
VpaK11BI	GGWCC	4 cut(s)	886, 1025, 1092, 1233
XapI	RAATTY	1 cut(s)	26
XhoI	CTCGAG	1 cut(s)	956
XmnI	GAANNNNTTC	2 cut(s)	326, 1146
XspI	CTAG	1 cut(s)	1636
ZraI	GACGTC	2 cut(s)	172, 235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.