4-coumarate-coa ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51680 AT1G51680 AT1G51680 AT3G21240 AT3G21240 AT3G21240 |
| fragaria_vesca | FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 |
| malus_domestica | MD13G1257800.v1.1 MD17G1229400.v1.1 |
| prunus_persica | Prupe.1G087900_v2.0.a1 Prupe.3G107300_v2.0.a1 |
| pyrus_communis | pycom13g22250 pycom17g23190 |
| rosa_chinensis | RchiOBHm_Chr2g0131501 RchiOBHm_Chr4g0402711 RchiOBHm_Chr5g0057551 |
| rosa_laevigata | RLG00000009052 RLG00000019189 |
| rosa_multiflora | Rmu_co7959539.1_g000001 Rmu_sc0000329.1_g000003 Rmu_sc0002230.1_g000020 Rmu_sc0002451.1_g000001 Rmu_sc0002808.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00112820 Rroxscaffold_5G00347470 |
| rosa_rugosa | Rorug02G0297600 Rorug04G0037900 |
| rosa_samantha | Rh2AG350900 Rh2BG357400 Rh2CG336600 Rh2DG375300 Rh4AG115500 Rh4CG122400 Rh4DG108000 |
| rosa_wichuraiana | Rw2G028470 Rw4G009230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1548 |
| AatII | GACGTC | 3 cut(s) | 237, 576, 711 |
| Acc36I | ACCTGC | 1 cut(s) | 655 |
| AccB1I | GGYRCC | 2 cut(s) | 140, 955 |
| AccBSI | CCGCTC | 1 cut(s) | 39 |
| AccI | GTMKAC | 1 cut(s) | 480 |
| AccII | CGCG | 3 cut(s) | 187, 300, 341 |
| AciI | CCGC | 8 cut(s) | 37, 300, 339, 341, 530, 728, 872, 1612 |
| AclWI | GGATC | 3 cut(s) | 340, 488, 1226 |
| AcoI | YGGCCR | 1 cut(s) | 438 |
| AcsI | RAATTY | 1 cut(s) | 266 |
| AcyI | GRCGYC | 3 cut(s) | 234, 573, 708 |
| AfaI | GTAC | 2 cut(s) | 164, 917 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 639, 1154, 1438 |
| AgeI | ACCGGT | 1 cut(s) | 146 |
| AgsI | TTSAA | 5 cut(s) | 751, 977, 1336, 1364, 1385 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 925 |
| AjnI | CCWGG | 2 cut(s) | 1096, 1180 |
| AleI | CACNNNNGTG | 1 cut(s) | 653 |
| Alw21I | GWGCWC | 4 cut(s) | 119, 180, 726, 942 |
| AlwI | GGATC | 3 cut(s) | 340, 488, 1226 |
| AoxI | GGCC | 6 cut(s) | 303, 438, 579, 657, 1042, 1368 |
| ApeKI | GCWGC | 6 cut(s) | 501, 785, 1078, 1273, 1421, 1448 |
| ApoI | RAATTY | 1 cut(s) | 266 |
| AsiGI | ACCGGT | 1 cut(s) | 146 |
| AsiSI | GCGATCGC | 1 cut(s) | 891 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 326, 806, 1581 |
| AspLEI | GCGC | 2 cut(s) | 187, 189 |
| AspS9I | GGNCC | 4 cut(s) | 303, 658, 1043, 1369 |
| AsuC2I | CCSGG | 2 cut(s) | 263, 598 |
| AsuHPI | GGTGA | 6 cut(s) | 161, 379, 634, 640, 1102, 1214 |
| BaeGI | GKGCMC | 1 cut(s) | 958 |
| BanI | GGYRCC | 2 cut(s) | 140, 955 |
| BanII | GRGCYC | 4 cut(s) | 119, 180, 207, 645 |
| BbsI | GAAGAC | 2 cut(s) | 85, 265 |
| Bbv12I | GWGCWC | 4 cut(s) | 119, 180, 726, 942 |
| BbvCI | CCTCAGC | 1 cut(s) | 316 |
| BbvI | GCAGC | 6 cut(s) | 488, 772, 1090, 1260, 1408, 1460 |
| BccI | CCATC | 5 cut(s) | 68, 665, 872, 1410, 1603 |
| BceAI | ACGGC | 1 cut(s) | 154 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 592, 626, 919, 953 |
| BciT130I | CCWGG | 2 cut(s) | 1098, 1182 |
| BcnI | CCSGG | 2 cut(s) | 263, 598 |
| BfaI | CTAG | 1 cut(s) | 1407 |
| BfuAI | ACCTGC | 1 cut(s) | 655 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 371 |
| BisI | GCNGC | 7 cut(s) | 502, 786, 872, 1079, 1274, 1422, 1449 |
| BlpI | GCTNAGC | 1 cut(s) | 1377 |
| BlsI | GCNGC | 7 cut(s) | 503, 787, 873, 1080, 1275, 1423, 1450 |
| Bme1390I | CCNGG | 4 cut(s) | 263, 598, 1098, 1182 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 925 |
| BmgT120I | GGNCC | 4 cut(s) | 303, 658, 1043, 1369 |
| BmiI | GGNNCC | 5 cut(s) | 142, 304, 957, 1371, 1461 |
| BmrFI | CCNGG | 4 cut(s) | 263, 598, 1098, 1182 |
| BmrI | ACTGGG | 2 cut(s) | 1040, 1650 |
| BmsI | GCATC | 2 cut(s) | 138, 1408 |
| BmuI | ACTGGG | 2 cut(s) | 1040, 1650 |
| BpiI | GAAGAC | 2 cut(s) | 85, 265 |
| BpmI | CTGGAG | 4 cut(s) | 801, 1176, 1203, 1473 |
| Bpu10I | CCTNAGC | 1 cut(s) | 316 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1377 |
| BpuEI | CTTGAG | 3 cut(s) | 133, 926, 1642 |
| BpuMI | CCSGG | 2 cut(s) | 263, 598 |
| BsaHI | GRCGYC | 3 cut(s) | 234, 573, 708 |
| BsaJI | CCNNGG | 5 cut(s) | 261, 283, 339, 390, 1097 |
| BsaWI | WCCGGW | 2 cut(s) | 146, 1462 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 101, 131 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 639, 1154, 1438 |
| Bse118I | RCCGGY | 2 cut(s) | 146, 440 |
| Bse1I | ACTGG | 3 cut(s) | 1046, 1159, 1645 |
| BseBI | CCWGG | 2 cut(s) | 1098, 1182 |
| BseDI | CCNNGG | 5 cut(s) | 261, 283, 339, 390, 1097 |
| BseGI | GGATG | 7 cut(s) | 54, 60, 538, 1109, 1402, 1447, 1513 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 639, 1154, 1438 |
| BseMII | CTCAG | 6 cut(s) | 330, 507, 1227, 1368, 1494, 1508 |
| BseNI | ACTGG | 3 cut(s) | 1046, 1159, 1645 |
| BsePI | GCGCGC | 1 cut(s) | 185 |
| BseSI | GKGCMC | 1 cut(s) | 958 |
| BseX3I | CGGCCG | 1 cut(s) | 438 |
| BseXI | GCAGC | 6 cut(s) | 488, 772, 1090, 1260, 1408, 1460 |
| BseYI | CCCAGC | 2 cut(s) | 497, 660 |
| Bsh1236I | CGCG | 3 cut(s) | 187, 300, 341 |
| Bsh1285I | CGRYCG | 3 cut(s) | 441, 879, 891 |
| BshFI | GGCC | 6 cut(s) | 305, 440, 581, 659, 1044, 1370 |
| BshNI | GGYRCC | 2 cut(s) | 140, 955 |
| BshTI | ACCGGT | 1 cut(s) | 146 |
| BsiEI | CGRYCG | 3 cut(s) | 441, 879, 891 |
| BsiHKAI | GWGCWC | 4 cut(s) | 119, 180, 726, 942 |
| BsiSI | CCGG | 6 cut(s) | 147, 263, 441, 548, 597, 1463 |
| BslFI | GGGAC | 2 cut(s) | 613, 1415 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 639, 1154, 1438 |
| BsmFI | GGGAC | 2 cut(s) | 613, 1415 |
| BsnI | GGCC | 6 cut(s) | 305, 440, 581, 659, 1044, 1370 |
| Bsp1286I | GDGCHC | 7 cut(s) | 119, 180, 207, 645, 726, 942, 958 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1377 |
| BspACI | CCGC | 8 cut(s) | 37, 300, 339, 341, 530, 728, 872, 1612 |
| BspANI | GGCC | 6 cut(s) | 305, 440, 581, 659, 1044, 1370 |
| BspCNI | CTCAG | 6 cut(s) | 329, 508, 1228, 1369, 1495, 1507 |
| BspFNI | CGCG | 3 cut(s) | 187, 300, 341 |
| BspHI | TCATGA | 3 cut(s) | 445, 457, 1212 |
| BspLI | GGNNCC | 5 cut(s) | 142, 304, 957, 1371, 1461 |
| BspMI | ACCTGC | 1 cut(s) | 655 |
| BspPI | GGATC | 3 cut(s) | 340, 488, 1226 |
| BspQI | GCTCTTC | 1 cut(s) | 1305 |
| BspT107I | GGYRCC | 2 cut(s) | 140, 955 |
| BsrBI | CCGCTC | 1 cut(s) | 39 |
| BsrFI | RCCGGY | 2 cut(s) | 146, 440 |
| BsrI | ACTGG | 3 cut(s) | 1046, 1159, 1645 |
| BssAI | RCCGGY | 2 cut(s) | 146, 440 |
| BssECI | CCNNGG | 5 cut(s) | 261, 283, 339, 390, 1097 |
| BssHII | GCGCGC | 1 cut(s) | 185 |
| BssNI | GRCGYC | 3 cut(s) | 234, 573, 708 |
| BssT1I | CCWWGG | 1 cut(s) | 390 |
| Bst2UI | CCWGG | 2 cut(s) | 1098, 1182 |
| Bst4CI | ACNGT | 2 cut(s) | 985, 1114 |
| Bst6I | CTCTTC | 1 cut(s) | 1305 |
| BstACI | GRCGYC | 3 cut(s) | 234, 573, 708 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1634 |
| BstC8I | GCNNGC | 7 cut(s) | 187, 357, 506, 722, 885, 1042, 1635 |
| BstDEI | CTNAG | 7 cut(s) | 316, 516, 773, 1236, 1377, 1494, 1503 |
| BstDSI | CCRYGG | 1 cut(s) | 339 |
| BstEII | GGTNACC | 1 cut(s) | 1202 |
| BstF5I | GGATG | 7 cut(s) | 54, 60, 538, 1109, 1402, 1447, 1513 |
| BstFNI | CGCG | 3 cut(s) | 187, 300, 341 |
| BstHHI | GCGC | 2 cut(s) | 187, 189 |
| BstMCI | CGRYCG | 3 cut(s) | 441, 879, 891 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 184, 211, 371, 769, 785, 880, 1290, 1634 |
| BstNI | CCWGG | 2 cut(s) | 1098, 1182 |
| BstNSI | RCATGY | 2 cut(s) | 399, 547 |
| BstPI | GGTNACC | 1 cut(s) | 1202 |
| BstSCI | CCNGG | 4 cut(s) | 261, 596, 1096, 1180 |
| BstSLI | GKGCMC | 1 cut(s) | 958 |
| BstUI | CGCG | 3 cut(s) | 187, 300, 341 |
| BstV1I | GCAGC | 6 cut(s) | 488, 772, 1090, 1260, 1408, 1460 |
| BstV2I | GAAGAC | 2 cut(s) | 85, 265 |
| BstX2I | RGATCY | 1 cut(s) | 345 |
| BstYI | RGATCY | 1 cut(s) | 345 |
| BstZI | CGGCCG | 1 cut(s) | 438 |
| BsuRI | GGCC | 6 cut(s) | 305, 440, 581, 659, 1044, 1370 |
| BtgI | CCRYGG | 1 cut(s) | 339 |
| BtsCI | GGATG | 7 cut(s) | 54, 60, 538, 1109, 1402, 1447, 1513 |
| BtsI | GCAGTG | 1 cut(s) | 706 |
| BtsIMutI | CAGTG | 4 cut(s) | 706, 1053, 1110, 1500 |
| BveI | ACCTGC | 1 cut(s) | 655 |
| Cac8I | GCNNGC | 7 cut(s) | 187, 357, 506, 722, 885, 1042, 1635 |
| CciI | TCATGA | 3 cut(s) | 445, 457, 1212 |
| CfoI | GCGC | 2 cut(s) | 187, 189 |
| Cfr10I | RCCGGY | 2 cut(s) | 146, 440 |
| Cfr13I | GGNCC | 4 cut(s) | 303, 658, 1043, 1369 |
| Cfr42I | CCGCGG | 1 cut(s) | 342 |
| CseI | GACGC | 1 cut(s) | 466 |
| Csp6I | GTAC | 2 cut(s) | 163, 916 |
| CspAI | ACCGGT | 1 cut(s) | 146 |
| CviAII | CATG | 8 cut(s) | 241, 307, 396, 446, 458, 472, 544, 1213 |
| CviQI | GTAC | 2 cut(s) | 163, 916 |
| DdeI | CTNAG | 7 cut(s) | 316, 516, 773, 1236, 1377, 1494, 1503 |
| DriI | GACNNNNNGTC | 1 cut(s) | 925 |
| EaeI | YGGCCR | 1 cut(s) | 438 |
| EagI | CGGCCG | 1 cut(s) | 438 |
| Eam1104I | CTCTTC | 1 cut(s) | 1305 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 925 |
| EarI | CTCTTC | 1 cut(s) | 1305 |
| Ecl136II | GAGCTC | 2 cut(s) | 117, 178 |
| EclXI | CGGCCG | 1 cut(s) | 438 |
| Eco130I | CCWWGG | 1 cut(s) | 390 |
| Eco24I | GRGCYC | 4 cut(s) | 119, 180, 207, 645 |
| Eco52I | CGGCCG | 1 cut(s) | 438 |
| Eco53kI | GAGCTC | 2 cut(s) | 117, 178 |
| Eco91I | GGTNACC | 1 cut(s) | 1202 |
| EcoICRI | GAGCTC | 2 cut(s) | 117, 178 |
| EcoO65I | GGTNACC | 1 cut(s) | 1202 |
| EcoRII | CCWGG | 2 cut(s) | 1096, 1180 |
| EcoT14I | CCWWGG | 1 cut(s) | 390 |
| EcoT38I | GRGCYC | 4 cut(s) | 119, 180, 207, 645 |
| ErhI | CCWWGG | 1 cut(s) | 390 |
| FaeI | CATG | 8 cut(s) | 244, 310, 399, 449, 461, 475, 547, 1216 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 95, 127, 905, 937, 1067, 1099, 1209, 1241 |
| FaqI | GGGAC | 2 cut(s) | 613, 1415 |
| FatI | CATG | 8 cut(s) | 240, 306, 395, 445, 457, 471, 543, 1212 |
| FauI | CCCGC | 3 cut(s) | 293, 346, 735 |
| FblI | GTMKAC | 1 cut(s) | 480 |
| Fnu4HI | GCNGC | 7 cut(s) | 502, 786, 872, 1079, 1274, 1422, 1449 |
| FokI | GGATG | 7 cut(s) | 41, 47, 545, 1116, 1389, 1454, 1520 |
| FriOI | GRGCYC | 4 cut(s) | 119, 180, 207, 645 |
| Fsp4HI | GCNGC | 7 cut(s) | 502, 786, 872, 1079, 1274, 1422, 1449 |
| FspBI | CTAG | 1 cut(s) | 1407 |
| GlaI | GCGC | 2 cut(s) | 186, 188 |
| GluI | GCNGC | 7 cut(s) | 502, 786, 872, 1079, 1274, 1422, 1449 |
| GsaI | CCCAGC | 2 cut(s) | 501, 664 |
| GsuI | CTGGAG | 4 cut(s) | 801, 1176, 1203, 1473 |
| HaeIII | GGCC | 6 cut(s) | 305, 440, 581, 659, 1044, 1370 |
| HapII | CCGG | 6 cut(s) | 147, 263, 441, 548, 597, 1463 |
| HgaI | GACGC | 1 cut(s) | 466 |
| HhaI | GCGC | 2 cut(s) | 187, 189 |
| Hin1I | GRCGYC | 3 cut(s) | 234, 573, 708 |
| Hin1II | CATG | 8 cut(s) | 244, 310, 399, 449, 461, 475, 547, 1216 |
| Hin6I | GCGC | 2 cut(s) | 185, 187 |
| HinP1I | GCGC | 2 cut(s) | 185, 187 |
| HincII | GTYRAC | 4 cut(s) | 481, 630, 1053, 1144 |
| HindII | GTYRAC | 4 cut(s) | 481, 630, 1053, 1144 |
| HindIII | AAGCTT | 1 cut(s) | 1631 |
| HinfI | GANTC | 6 cut(s) | 192, 219, 482, 679, 931, 1238 |
| HpaI | GTTAAC | 1 cut(s) | 630 |
| HpaII | CCGG | 6 cut(s) | 147, 263, 441, 548, 597, 1463 |
| HphI | GGTGA | 6 cut(s) | 161, 379, 634, 640, 1102, 1214 |
| Hpy166II | GTNNAC | 7 cut(s) | 34, 481, 556, 630, 1053, 1144, 1242 |
| Hpy188I | TCNGA | 8 cut(s) | 169, 218, 287, 517, 1121, 1417, 1497, 1587 |
| Hpy188III | TCNNGA | 8 cut(s) | 446, 458, 811, 838, 908, 1135, 1213, 1235 |
| Hpy8I | GTNNAC | 7 cut(s) | 34, 481, 556, 630, 1053, 1144, 1242 |
| Hpy99I | CGWCG | 8 cut(s) | 236, 482, 575, 578, 607, 710, 713, 931 |
| HpyAV | CCTTC | 7 cut(s) | 289, 409, 961, 1259, 1330, 1432, 1609 |
| HpyCH4III | ACNGT | 2 cut(s) | 985, 1114 |
| HpyCH4IV | ACGT | 3 cut(s) | 234, 573, 708 |
| HpyCH4V | TGCA | 6 cut(s) | 129, 508, 1127, 1194, 1276, 1469 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 184, 211, 371, 769, 785, 880, 1290, 1634 |
| HpyF3I | CTNAG | 7 cut(s) | 316, 516, 773, 1236, 1377, 1494, 1503 |
| HpySE526I | ACGT | 3 cut(s) | 234, 573, 708 |
| Hsp92I | GRCGYC | 3 cut(s) | 234, 573, 708 |
| Hsp92II | CATG | 8 cut(s) | 244, 310, 399, 449, 461, 475, 547, 1216 |
| HspAI | GCGC | 2 cut(s) | 185, 187 |
| KspAI | GTTAAC | 1 cut(s) | 630 |
| KspI | CCGCGG | 1 cut(s) | 342 |
| LguI | GCTCTTC | 1 cut(s) | 1305 |
| LmnI | GCTCC | 9 cut(s) | 44, 122, 175, 255, 287, 729, 782, 970, 1157 |
| Lsp1109I | GCAGC | 6 cut(s) | 488, 772, 1090, 1260, 1408, 1460 |
| LweI | GCATC | 2 cut(s) | 138, 1408 |
| MaeI | CTAG | 1 cut(s) | 1407 |
| MaeII | ACGT | 3 cut(s) | 234, 573, 708 |
| MaeIII | GTNAC | 7 cut(s) | 149, 398, 646, 701, 1006, 1202, 1396 |
| MbiI | CCGCTC | 1 cut(s) | 39 |
| MboII | GAAGA | 5 cut(s) | 85, 265, 322, 989, 1322 |
| MflI | RGATCY | 1 cut(s) | 345 |
| MhlI | GDGCHC | 7 cut(s) | 119, 180, 207, 645, 726, 942, 958 |
| MluCI | AATT | 3 cut(s) | 266, 1520, 1651 |
| MlyI | GAGTC | 4 cut(s) | 201, 228, 476, 1247 |
| MmeI | TCCRAC | 1 cut(s) | 247 |
| MroXI | GAANNNNTTC | 3 cut(s) | 326, 806, 1581 |
| MseI | TTAA | 4 cut(s) | 465, 629, 1227, 1556 |
| MslI | CAYNNNNRTG | 5 cut(s) | 87, 450, 653, 794, 1407 |
| MspA1I | CMGCKG | 3 cut(s) | 341, 501, 1451 |
| MspI | CCGG | 6 cut(s) | 147, 263, 441, 548, 597, 1463 |
| MspR9I | CCNGG | 4 cut(s) | 263, 598, 1098, 1182 |
| MvaI | CCWGG | 2 cut(s) | 1098, 1182 |
| MvnI | CGCG | 3 cut(s) | 187, 300, 341 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 184, 211, 371, 769, 785, 880, 1290, 1634 |
| NciI | CCSGG | 2 cut(s) | 263, 598 |
| NlaIII | CATG | 8 cut(s) | 244, 310, 399, 449, 461, 475, 547, 1216 |
| NlaIV | GGNNCC | 5 cut(s) | 142, 304, 957, 1371, 1461 |
| NmuCI | GTSAC | 5 cut(s) | 149, 646, 701, 1006, 1202 |
| NspI | RCATGY | 2 cut(s) | 399, 547 |
| OliI | CACNNNNGTG | 1 cut(s) | 653 |
| PagI | TCATGA | 3 cut(s) | 445, 457, 1212 |
| PauI | GCGCGC | 1 cut(s) | 185 |
| PciSI | GCTCTTC | 1 cut(s) | 1305 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 317, 567, 599, 611, 651, 717, 915 |
| PdmI | GAANNNNTTC | 3 cut(s) | 326, 806, 1581 |
| PfeI | GAWTC | 2 cut(s) | 679, 931 |
| PflFI | GACNNNGTC | 2 cut(s) | 707, 1057 |
| PfoI | TCCNGGA | 1 cut(s) | 596 |
| PinAI | ACCGGT | 1 cut(s) | 146 |
| PkrI | GCNGC | 7 cut(s) | 503, 787, 873, 1080, 1275, 1423, 1450 |
| Ple19I | CGATCG | 2 cut(s) | 879, 891 |
| PleI | GAGTC | 4 cut(s) | 200, 227, 476, 1246 |
| PpsI | GAGTC | 4 cut(s) | 200, 227, 476, 1246 |
| PsiI | TTATAA | 1 cut(s) | 1548 |
| Psp124BI | GAGCTC | 2 cut(s) | 119, 180 |
| Psp6I | CCWGG | 2 cut(s) | 1096, 1180 |
| PspEI | GGTNACC | 1 cut(s) | 1202 |
| PspFI | CCCAGC | 2 cut(s) | 497, 660 |
| PspGI | CCWGG | 2 cut(s) | 1096, 1180 |
| PspN4I | GGNNCC | 5 cut(s) | 142, 304, 957, 1371, 1461 |
| PspPI | GGNCC | 4 cut(s) | 303, 658, 1043, 1369 |
| PsuI | RGATCY | 1 cut(s) | 345 |
| PsyI | GACNNNGTC | 2 cut(s) | 707, 1057 |
| PteI | GCGCGC | 1 cut(s) | 185 |
| PvuI | CGATCG | 2 cut(s) | 879, 891 |
| PvuII | CAGCTG | 2 cut(s) | 501, 1451 |
| RgaI | GCGATCGC | 1 cut(s) | 891 |
| RsaI | GTAC | 2 cut(s) | 164, 917 |
| RsaNI | GTAC | 2 cut(s) | 163, 916 |
| RseI | CAYNNNNRTG | 5 cut(s) | 87, 450, 653, 794, 1407 |
| SacI | GAGCTC | 2 cut(s) | 119, 180 |
| SacII | CCGCGG | 1 cut(s) | 342 |
| SalI | GTCGAC | 1 cut(s) | 479 |
| SapI | GCTCTTC | 1 cut(s) | 1305 |
| SaqAI | TTAA | 4 cut(s) | 465, 629, 1227, 1556 |
| SatI | GCNGC | 7 cut(s) | 502, 786, 872, 1079, 1274, 1422, 1449 |
| Sau96I | GGNCC | 4 cut(s) | 303, 658, 1043, 1369 |
| SchI | GAGTC | 4 cut(s) | 201, 228, 476, 1247 |
| ScrFI | CCNGG | 4 cut(s) | 263, 598, 1098, 1182 |
| SduI | GDGCHC | 7 cut(s) | 119, 180, 207, 645, 726, 942, 958 |
| SfaAI | GCGATCGC | 1 cut(s) | 891 |
| SfaNI | GCATC | 2 cut(s) | 138, 1408 |
| Sfr303I | CCGCGG | 1 cut(s) | 342 |
| SgfI | GCGATCGC | 1 cut(s) | 891 |
| SgrAI | CRCCGGYG | 1 cut(s) | 146 |
| SgrBI | CCGCGG | 1 cut(s) | 342 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 87, 450, 653, 794, 1407 |
| SmlI | CTYRAG | 3 cut(s) | 112, 941, 1621 |
| SmoI | CTYRAG | 3 cut(s) | 112, 941, 1621 |
| Sse9I | AATT | 3 cut(s) | 266, 1520, 1651 |
| SsiI | CCGC | 8 cut(s) | 37, 300, 339, 341, 530, 728, 872, 1612 |
| SspMI | CTAG | 1 cut(s) | 1407 |
| SstI | GAGCTC | 2 cut(s) | 119, 180 |
| StyD4I | CCNGG | 4 cut(s) | 261, 596, 1096, 1180 |
| StyI | CCWWGG | 1 cut(s) | 390 |
| TaaI | ACNGT | 2 cut(s) | 985, 1114 |
| TaiI | ACGT | 3 cut(s) | 237, 576, 711 |
| TaqI | TCGA | 8 cut(s) | 480, 561, 810, 837, 909, 929, 1561, 1575 |
| TasI | AATT | 3 cut(s) | 266, 1520, 1651 |
| TauI | GCSGC | 1 cut(s) | 874 |
| TfiI | GAWTC | 2 cut(s) | 679, 931 |
| Tru1I | TTAA | 4 cut(s) | 465, 629, 1227, 1556 |
| Tru9I | TTAA | 4 cut(s) | 465, 629, 1227, 1556 |
| TscAI | CASTG | 4 cut(s) | 706, 1053, 1117, 1507 |
| TseFI | GTSAC | 5 cut(s) | 149, 646, 701, 1006, 1202 |
| TseI | GCWGC | 6 cut(s) | 501, 785, 1078, 1273, 1421, 1448 |
| Tsp45I | GTSAC | 5 cut(s) | 149, 646, 701, 1006, 1202 |
| TspDTI | ATGAA | 9 cut(s) | 446, 549, 815, 1229, 1285, 1309, 1451, 1524, 1561 |
| TspRI | CASTG | 4 cut(s) | 706, 1053, 1117, 1507 |
| Tth111I | GACNNNGTC | 2 cut(s) | 707, 1057 |
| XapI | RAATTY | 1 cut(s) | 266 |
| XceI | RCATGY | 2 cut(s) | 399, 547 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 668 |
| XmiI | GTMKAC | 1 cut(s) | 480 |
| XmnI | GAANNNNTTC | 3 cut(s) | 326, 806, 1581 |
| XspI | CTAG | 1 cut(s) | 1407 |
| ZraI | GACGTC | 3 cut(s) | 235, 574, 709 |