4-coumarate-coa ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51680 AT1G51680 AT1G51680 AT3G21240 AT3G21240 AT3G21240 |
| fragaria_vesca | FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_4g09340 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 FvH4_6g27940 |
| malus_domestica | MD13G1257800.v1.1 MD17G1229400.v1.1 |
| prunus_persica | Prupe.1G087900_v2.0.a1 Prupe.3G107300_v2.0.a1 |
| pyrus_communis | pycom13g22250 pycom17g23190 |
| rosa_chinensis | RchiOBHm_Chr2g0131501 RchiOBHm_Chr4g0402711 RchiOBHm_Chr5g0057551 |
| rosa_laevigata | RLG00000009052 RLG00000019189 |
| rosa_multiflora | Rmu_co7959539.1_g000001 Rmu_sc0000329.1_g000003 Rmu_sc0002230.1_g000020 Rmu_sc0002451.1_g000001 Rmu_sc0002808.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00112820 Rroxscaffold_5G00347470 |
| rosa_rugosa | Rorug02G0297600 Rorug04G0037900 |
| rosa_samantha | Rh2AG350900 Rh2BG357400 Rh2CG336600 Rh2DG375300 Rh4AG115500 Rh4CG122400 Rh4DG108000 |
| rosa_wichuraiana | Rw2G028470 Rw4G009230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 3 cut(s) | 26, 780, 1052 |
| Acc36I | ACCTGC | 3 cut(s) | 1180, 1440, 2156 |
| AccB1I | GGYRCC | 1 cut(s) | 830 |
| AccI | GTMKAC | 2 cut(s) | 1194, 2170 |
| AccII | CGCG | 2 cut(s) | 306, 1302 |
| AccIII | TCCGGA | 2 cut(s) | 1426, 1706 |
| AciI | CCGC | 7 cut(s) | 469, 730, 741, 938, 1293, 1300, 1632 |
| AclI | AACGTT | 1 cut(s) | 981 |
| AclWI | GGATC | 2 cut(s) | 1231, 1309 |
| AcoI | YGGCCR | 2 cut(s) | 691, 738 |
| AcsI | RAATTY | 2 cut(s) | 370, 569 |
| AcvI | CACGTG | 1 cut(s) | 214 |
| AcyI | GRCGYC | 5 cut(s) | 12, 23, 777, 831, 1049 |
| AfaI | GTAC | 4 cut(s) | 218, 1115, 1442, 1820 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 454, 736, 811, 1279 |
| AflIII | ACRYGT | 5 cut(s) | 95, 211, 213, 304, 387 |
| AgeI | ACCGGT | 1 cut(s) | 1437 |
| AgsI | TTSAA | 2 cut(s) | 585, 1411 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1301, 1450 |
| AjiI | CACGTC | 4 cut(s) | 353, 390, 1099, 1234 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 132, 164 |
| AleI | CACNNNNGTG | 1 cut(s) | 1806 |
| Alw21I | GWGCWC | 4 cut(s) | 723, 1500, 1842, 1908 |
| Alw26I | GTCTC | 3 cut(s) | 197, 401, 752 |
| AlwI | GGATC | 2 cut(s) | 1231, 1309 |
| Ama87I | CYCGRG | 1 cut(s) | 1499 |
| Aor13HI | TCCGGA | 2 cut(s) | 1426, 1706 |
| AoxI | GGCC | 5 cut(s) | 691, 738, 813, 939, 1515 |
| ApeKI | GCWGC | 9 cut(s) | 589, 1108, 1135, 1186, 1249, 1478, 1946, 1973, 2162 |
| ApoI | RAATTY | 2 cut(s) | 370, 569 |
| AsiGI | ACCGGT | 1 cut(s) | 1437 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1689 |
| AspLEI | GCGC | 4 cut(s) | 833, 1108, 1186, 1387 |
| AspS9I | GGNCC | 5 cut(s) | 1429, 1515, 1568, 1635, 1776 |
| AsuC2I | CCSGG | 3 cut(s) | 1073, 1091, 1474 |
| AvaI | CYCGRG | 1 cut(s) | 1499 |
| AvaII | GGWCC | 4 cut(s) | 1429, 1568, 1635, 1776 |
| AxyI | CCTNAGG | 1 cut(s) | 1761 |
| BaeGI | GKGCMC | 1 cut(s) | 103 |
| BanI | GGYRCC | 1 cut(s) | 830 |
| BanII | GRGCYC | 4 cut(s) | 723, 1500, 1842, 1908 |
| BbrPI | CACGTG | 1 cut(s) | 214 |
| Bbv12I | GWGCWC | 4 cut(s) | 723, 1500, 1842, 1908 |
| BbvI | GCAGC | 9 cut(s) | 576, 1095, 1122, 1198, 1236, 1465, 1933, 1960, 2149 |
| BccI | CCATC | 7 cut(s) | 49, 415, 995, 1456, 1480, 1788, 1935 |
| BceAI | ACGGC | 6 cut(s) | 697, 876, 1096, 1213, 1237, 1372 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1117, 1151 |
| BciVI | GTATCC | 1 cut(s) | 1739 |
| BclI | TGATCA | 3 cut(s) | 675, 924, 1320 |
| BcnI | CCSGG | 3 cut(s) | 1073, 1091, 1474 |
| BcoDI | GTCTC | 3 cut(s) | 197, 401, 752 |
| BfaI | CTAG | 1 cut(s) | 2179 |
| BfmI | CTRYAG | 2 cut(s) | 1974, 2163 |
| BfoI | RGCGCY | 2 cut(s) | 834, 1109 |
| BfuAI | ACCTGC | 3 cut(s) | 1180, 1440, 2156 |
| BfuI | GTATCC | 1 cut(s) | 1739 |
| BlpI | GCTNAGC | 1 cut(s) | 1902 |
| Bme1390I | CCNGG | 3 cut(s) | 1073, 1091, 1474 |
| Bme18I | GGWCC | 4 cut(s) | 1429, 1568, 1635, 1776 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1301, 1450 |
| BmeT110I | CYCGRG | 1 cut(s) | 1499 |
| BmgBI | CACGTC | 4 cut(s) | 353, 390, 1099, 1234 |
| BmgT120I | GGNCC | 5 cut(s) | 1429, 1515, 1568, 1635, 1776 |
| BmiI | GGNNCC | 4 cut(s) | 832, 1636, 1986, 2017 |
| BmrFI | CCNGG | 3 cut(s) | 1073, 1091, 1474 |
| BmsI | GCATC | 4 cut(s) | 858, 1140, 1728, 1933 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 632, 664 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1902 |
| BpuEI | CTTGAG | 2 cut(s) | 918, 2167 |
| BpuMI | CCSGG | 3 cut(s) | 1073, 1091, 1474 |
| Bsa29I | ATCGAT | 1 cut(s) | 1824 |
| BsaAI | YACGTR | 3 cut(s) | 214, 946, 1750 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1319, 1661, 1718 |
| BsaHI | GRCGYC | 5 cut(s) | 12, 23, 777, 831, 1049 |
| BsaI | GGTCTC | 1 cut(s) | 752 |
| BsaJI | CCNNGG | 5 cut(s) | 826, 885, 1071, 1473, 1723 |
| BsaWI | WCCGGW | 4 cut(s) | 382, 1426, 1437, 1706 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 479, 509, 1253, 1283 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 454, 736, 811, 1279 |
| Bse118I | RCCGGY | 4 cut(s) | 689, 743, 1437, 1897 |
| Bse1I | ACTGG | 3 cut(s) | 393, 1571, 2128 |
| Bse21I | CCTNAGG | 1 cut(s) | 1761 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1319, 1661, 1718 |
| BseAI | TCCGGA | 2 cut(s) | 1426, 1706 |
| BseCI | ATCGAT | 1 cut(s) | 1824 |
| BseDI | CCNNGG | 5 cut(s) | 826, 885, 1071, 1473, 1723 |
| BseJI | GATNNNNATC | 3 cut(s) | 1319, 1661, 1718 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 454, 736, 811, 1279 |
| BseMII | CTCAG | 6 cut(s) | 1551, 1644, 1752, 1761, 1893, 2019 |
| BseNI | ACTGG | 3 cut(s) | 393, 1571, 2128 |
| BseRI | GAGGAG | 2 cut(s) | 779, 782 |
| BseSI | GKGCMC | 1 cut(s) | 103 |
| BseXI | GCAGC | 9 cut(s) | 576, 1095, 1122, 1198, 1236, 1465, 1933, 1960, 2149 |
| BseYI | CCCAGC | 1 cut(s) | 1041 |
| BsgI | GTGCAG | 1 cut(s) | 1418 |
| Bsh1236I | CGCG | 2 cut(s) | 306, 1302 |
| BshFI | GGCC | 5 cut(s) | 693, 740, 815, 941, 1517 |
| BshNI | GGYRCC | 1 cut(s) | 830 |
| BshTI | ACCGGT | 1 cut(s) | 1437 |
| BshVI | ATCGAT | 1 cut(s) | 1824 |
| BsiHKAI | GWGCWC | 4 cut(s) | 723, 1500, 1842, 1908 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1499 |
| BslFI | GGGAC | 4 cut(s) | 651, 1018, 1138, 1648 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 454, 736, 811, 1279 |
| BsmAI | GTCTC | 3 cut(s) | 197, 401, 752 |
| BsmFI | GGGAC | 4 cut(s) | 651, 1018, 1138, 1648 |
| BsmI | GAATGC | 2 cut(s) | 762, 821 |
| BsnI | GGCC | 5 cut(s) | 693, 740, 815, 941, 1517 |
| Bso31I | GGTCTC | 1 cut(s) | 752 |
| BsoBI | CYCGRG | 1 cut(s) | 1499 |
| Bsp1286I | GDGCHC | 5 cut(s) | 103, 723, 1500, 1842, 1908 |
| Bsp13I | TCCGGA | 2 cut(s) | 1426, 1706 |
| Bsp1407I | TGTACA | 1 cut(s) | 216 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1902 |
| BspACI | CCGC | 7 cut(s) | 469, 730, 741, 938, 1293, 1300, 1632 |
| BspANI | GGCC | 5 cut(s) | 693, 740, 815, 941, 1517 |
| BspCNI | CTCAG | 6 cut(s) | 1552, 1645, 1753, 1762, 1894, 2020 |
| BspDI | ATCGAT | 1 cut(s) | 1824 |
| BspEI | TCCGGA | 2 cut(s) | 1426, 1706 |
| BspFNI | CGCG | 2 cut(s) | 306, 1302 |
| BspHI | TCATGA | 1 cut(s) | 1737 |
| BspLI | GGNNCC | 4 cut(s) | 832, 1636, 1986, 2017 |
| BspMAI | CTGCAG | 2 cut(s) | 1978, 2167 |
| BspMI | ACCTGC | 3 cut(s) | 1180, 1440, 2156 |
| BspPI | GGATC | 2 cut(s) | 1231, 1309 |
| BspQI | GCTCTTC | 1 cut(s) | 1847 |
| BspT107I | GGYRCC | 1 cut(s) | 830 |
| BspTNI | GGTCTC | 1 cut(s) | 752 |
| BsrFI | RCCGGY | 4 cut(s) | 689, 743, 1437, 1897 |
| BsrGI | TGTACA | 1 cut(s) | 216 |
| BsrI | ACTGG | 3 cut(s) | 393, 1571, 2128 |
| BssAI | RCCGGY | 4 cut(s) | 689, 743, 1437, 1897 |
| BssECI | CCNNGG | 5 cut(s) | 826, 885, 1071, 1473, 1723 |
| BssNI | GRCGYC | 5 cut(s) | 12, 23, 777, 831, 1049 |
| Bst4CI | ACNGT | 6 cut(s) | 563, 665, 1510, 1639, 1856, 2015 |
| Bst6I | CTCTTC | 1 cut(s) | 1847 |
| BstACI | GRCGYC | 5 cut(s) | 12, 23, 777, 831, 1049 |
| BstAUI | TGTACA | 1 cut(s) | 216 |
| BstBAI | YACGTR | 3 cut(s) | 214, 946, 1750 |
| BstC8I | GCNNGC | 4 cut(s) | 900, 1247, 1630, 2160 |
| BstDEI | CTNAG | 7 cut(s) | 188, 1560, 1653, 1761, 1770, 1902, 2028 |
| BstFNI | CGCG | 2 cut(s) | 306, 1302 |
| BstH2I | RGCGCY | 2 cut(s) | 834, 1109 |
| BstHHI | GCGC | 4 cut(s) | 833, 1108, 1186, 1387 |
| BstMAI | GTCTC | 3 cut(s) | 197, 401, 752 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 468, 690, 890, 899, 914, 1299, 1393, 2159 |
| BstSCI | CCNGG | 3 cut(s) | 1071, 1089, 1472 |
| BstSFI | CTRYAG | 2 cut(s) | 1974, 2163 |
| BstSLI | GKGCMC | 1 cut(s) | 103 |
| BstUI | CGCG | 2 cut(s) | 306, 1302 |
| BstV1I | GCAGC | 9 cut(s) | 576, 1095, 1122, 1198, 1236, 1465, 1933, 1960, 2149 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1588 |
| Bsu15I | ATCGAT | 1 cut(s) | 1824 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1761 |
| BsuI | GTATCC | 1 cut(s) | 1739 |
| BsuRI | GGCC | 5 cut(s) | 693, 740, 815, 941, 1517 |
| BsuTUI | ATCGAT | 1 cut(s) | 1824 |
| BtgZI | GCGATG | 1 cut(s) | 1399 |
| BtrI | CACGTC | 4 cut(s) | 353, 390, 1099, 1234 |
| BtsI | GCAGTG | 2 cut(s) | 903, 1083 |
| BtsIMutI | CAGTG | 3 cut(s) | 903, 1083, 1506 |
| BveI | ACCTGC | 3 cut(s) | 1180, 1440, 2156 |
| Cac8I | GCNNGC | 4 cut(s) | 900, 1247, 1630, 2160 |
| CciI | TCATGA | 1 cut(s) | 1737 |
| CfoI | GCGC | 4 cut(s) | 833, 1108, 1186, 1387 |
| Cfr10I | RCCGGY | 4 cut(s) | 689, 743, 1437, 1897 |
| Cfr13I | GGNCC | 5 cut(s) | 1429, 1515, 1568, 1635, 1776 |
| ClaI | ATCGAT | 1 cut(s) | 1824 |
| CseI | GACGC | 5 cut(s) | 20, 43, 312, 1165, 1291 |
| Csp6I | GTAC | 4 cut(s) | 217, 1114, 1441, 1819 |
| CspAI | ACCGGT | 1 cut(s) | 1437 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2043, 2078 |
| CviAII | CATG | 7 cut(s) | 659, 784, 991, 1324, 1582, 1738, 1915 |
| CviQI | GTAC | 4 cut(s) | 217, 1114, 1441, 1819 |
| DdeI | CTNAG | 7 cut(s) | 188, 1560, 1653, 1761, 1770, 1902, 2028 |
| DinI | GGCGCC | 1 cut(s) | 832 |
| DraI | TTTAAA | 1 cut(s) | 1860 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1301, 1450 |
| EaeI | YGGCCR | 2 cut(s) | 691, 738 |
| Eam1104I | CTCTTC | 1 cut(s) | 1847 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1301, 1450 |
| EarI | CTCTTC | 1 cut(s) | 1847 |
| Ecl136II | GAGCTC | 4 cut(s) | 721, 1498, 1840, 1906 |
| Eco24I | GRGCYC | 4 cut(s) | 723, 1500, 1842, 1908 |
| Eco31I | GGTCTC | 1 cut(s) | 752 |
| Eco32I | GATATC | 1 cut(s) | 2025 |
| Eco47I | GGWCC | 4 cut(s) | 1429, 1568, 1635, 1776 |
| Eco53kI | GAGCTC | 4 cut(s) | 721, 1498, 1840, 1906 |
| Eco72I | CACGTG | 1 cut(s) | 214 |
| Eco81I | CCTNAGG | 1 cut(s) | 1761 |
| Eco88I | CYCGRG | 1 cut(s) | 1499 |
| EcoICRI | GAGCTC | 4 cut(s) | 721, 1498, 1840, 1906 |
| EcoRI | GAATTC | 1 cut(s) | 569 |
| EcoRV | GATATC | 1 cut(s) | 2025 |
| EcoT38I | GRGCYC | 4 cut(s) | 723, 1500, 1842, 1908 |
| EgeI | GGCGCC | 1 cut(s) | 832 |
| EheI | GGCGCC | 1 cut(s) | 832 |
| FaeI | CATG | 7 cut(s) | 662, 787, 994, 1327, 1585, 1741, 1918 |
| FaqI | GGGAC | 4 cut(s) | 651, 1018, 1138, 1648 |
| FatI | CATG | 7 cut(s) | 658, 783, 990, 1323, 1581, 1737, 1914 |
| FauI | CCCGC | 2 cut(s) | 737, 1625 |
| FbaI | TGATCA | 3 cut(s) | 675, 924, 1320 |
| FblI | GTMKAC | 2 cut(s) | 1194, 2170 |
| FriOI | GRGCYC | 4 cut(s) | 723, 1500, 1842, 1908 |
| FspBI | CTAG | 1 cut(s) | 2179 |
| GlaI | GCGC | 4 cut(s) | 832, 1107, 1185, 1386 |
| GsaI | CCCAGC | 1 cut(s) | 1045 |
| HaeII | RGCGCY | 2 cut(s) | 834, 1109 |
| HaeIII | GGCC | 5 cut(s) | 693, 740, 815, 941, 1517 |
| HgaI | GACGC | 5 cut(s) | 20, 43, 312, 1165, 1291 |
| HhaI | GCGC | 4 cut(s) | 833, 1108, 1186, 1387 |
| Hin1I | GRCGYC | 5 cut(s) | 12, 23, 777, 831, 1049 |
| Hin1II | CATG | 7 cut(s) | 662, 787, 994, 1327, 1585, 1741, 1918 |
| Hin6I | GCGC | 4 cut(s) | 831, 1106, 1184, 1385 |
| HinP1I | GCGC | 4 cut(s) | 831, 1106, 1184, 1385 |
| HincII | GTYRAC | 3 cut(s) | 270, 1195, 1852 |
| HindII | GTYRAC | 3 cut(s) | 270, 1195, 1852 |
| HinfI | GANTC | 6 cut(s) | 88, 148, 1296, 1423, 1456, 1685 |
| Hpy166II | GTNNAC | 8 cut(s) | 175, 217, 264, 270, 949, 1195, 1852, 2171 |
| Hpy188III | TCNNGA | 8 cut(s) | 566, 607, 640, 749, 1318, 1427, 1707, 1738 |
| Hpy8I | GTNNAC | 8 cut(s) | 175, 217, 264, 270, 949, 1195, 1852, 2171 |
| HpyCH4III | ACNGT | 6 cut(s) | 563, 665, 1510, 1639, 1856, 2015 |
| HpyCH4V | TGCA | 9 cut(s) | 1033, 1327, 1435, 1598, 1719, 1801, 1976, 1994, 2165 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 468, 690, 890, 899, 914, 1299, 1393, 2159 |
| HpyF3I | CTNAG | 7 cut(s) | 188, 1560, 1653, 1761, 1770, 1902, 2028 |
| Hsp92I | GRCGYC | 5 cut(s) | 12, 23, 777, 831, 1049 |
| Hsp92II | CATG | 7 cut(s) | 662, 787, 994, 1327, 1585, 1741, 1918 |
| HspAI | GCGC | 4 cut(s) | 831, 1106, 1184, 1385 |
| KasI | GGCGCC | 1 cut(s) | 830 |
| Kpn2I | TCCGGA | 2 cut(s) | 1426, 1706 |
| Ksp22I | TGATCA | 3 cut(s) | 675, 924, 1320 |
| LguI | GCTCTTC | 1 cut(s) | 1847 |
| LmnI | GCTCC | 5 cut(s) | 792, 1307, 1486, 1495, 2122 |
| Lsp1109I | GCAGC | 9 cut(s) | 576, 1095, 1122, 1198, 1236, 1465, 1933, 1960, 2149 |
| LweI | GCATC | 4 cut(s) | 858, 1140, 1728, 1933 |
| MaeI | CTAG | 1 cut(s) | 2179 |
| MaeIII | GTNAC | 8 cut(s) | 8, 24, 207, 296, 307, 563, 1171, 1375 |
| MboII | GAAGA | 5 cut(s) | 143, 496, 1672, 1834, 2086 |
| MfeI | CAATTG | 2 cut(s) | 345, 1989 |
| MhlI | GDGCHC | 5 cut(s) | 103, 723, 1500, 1842, 1908 |
| MluCI | AATT | 6 cut(s) | 345, 370, 569, 653, 809, 1989 |
| MluI | ACGCGT | 1 cut(s) | 304 |
| Mly113I | GGCGCC | 1 cut(s) | 831 |
| MlyI | GAGTC | 3 cut(s) | 97, 1290, 1432 |
| MmeI | TCCRAC | 6 cut(s) | 56, 116, 823, 936, 1285, 1332 |
| MroI | TCCGGA | 2 cut(s) | 1426, 1706 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1689 |
| MseI | TTAA | 5 cut(s) | 377, 984, 1859, 1872, 2040 |
| MslI | CAYNNNNRTG | 2 cut(s) | 995, 1806 |
| MspA1I | CMGCKG | 1 cut(s) | 1045 |
| MspR9I | CCNGG | 3 cut(s) | 1073, 1091, 1474 |
| MunI | CAATTG | 2 cut(s) | 345, 1989 |
| Mva1269I | GAATGC | 2 cut(s) | 762, 821 |
| MvnI | CGCG | 2 cut(s) | 306, 1302 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 468, 690, 890, 899, 914, 1299, 1393, 2159 |
| NarI | GGCGCC | 1 cut(s) | 831 |
| NciI | CCSGG | 3 cut(s) | 1073, 1091, 1474 |
| NlaIII | CATG | 7 cut(s) | 662, 787, 994, 1327, 1585, 1741, 1918 |
| NlaIV | GGNNCC | 4 cut(s) | 832, 1636, 1986, 2017 |
| NmeAIII | GCCGAG | 3 cut(s) | 738, 807, 910 |
| NmuCI | GTSAC | 7 cut(s) | 8, 24, 207, 296, 563, 1171, 1375 |
| OliI | CACNNNNGTG | 1 cut(s) | 1806 |
| PaeR7I | CTCGAG | 1 cut(s) | 1499 |
| PagI | TCATGA | 1 cut(s) | 1737 |
| PciSI | GCTCTTC | 1 cut(s) | 1847 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 29, 92, 1124, 1136, 1830 |
| PctI | GAATGC | 2 cut(s) | 762, 821 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1689 |
| PfeI | GAWTC | 3 cut(s) | 148, 1456, 1685 |
| PflFI | GACNNNGTC | 3 cut(s) | 779, 1009, 1508 |
| PinAI | ACCGGT | 1 cut(s) | 1437 |
| PleI | GAGTC | 3 cut(s) | 96, 1290, 1431 |
| PluTI | GGCGCC | 1 cut(s) | 834 |
| PmaCI | CACGTG | 1 cut(s) | 214 |
| PmlI | CACGTG | 1 cut(s) | 214 |
| PpsI | GAGTC | 3 cut(s) | 96, 1290, 1431 |
| Ppu21I | YACGTR | 3 cut(s) | 214, 946, 1750 |
| Psp124BI | GAGCTC | 4 cut(s) | 723, 1500, 1842, 1908 |
| Psp1406I | AACGTT | 1 cut(s) | 981 |
| PspCI | CACGTG | 1 cut(s) | 214 |
| PspFI | CCCAGC | 1 cut(s) | 1041 |
| PspN4I | GGNNCC | 4 cut(s) | 832, 1636, 1986, 2017 |
| PspPI | GGNCC | 5 cut(s) | 1429, 1515, 1568, 1635, 1776 |
| PspXI | VCTCGAGB | 1 cut(s) | 1499 |
| PstI | CTGCAG | 2 cut(s) | 1978, 2167 |
| PsyI | GACNNNGTC | 3 cut(s) | 779, 1009, 1508 |
| PvuII | CAGCTG | 1 cut(s) | 1045 |
| RsaI | GTAC | 4 cut(s) | 218, 1115, 1442, 1820 |
| RsaNI | GTAC | 4 cut(s) | 217, 1114, 1441, 1819 |
| RseI | CAYNNNNRTG | 2 cut(s) | 995, 1806 |
| SacI | GAGCTC | 4 cut(s) | 723, 1500, 1842, 1908 |
| SalI | GTCGAC | 1 cut(s) | 1193 |
| SapI | GCTCTTC | 1 cut(s) | 1847 |
| SaqAI | TTAA | 5 cut(s) | 377, 984, 1859, 1872, 2040 |
| Sau96I | GGNCC | 5 cut(s) | 1429, 1515, 1568, 1635, 1776 |
| SchI | GAGTC | 3 cut(s) | 97, 1290, 1432 |
| ScrFI | CCNGG | 3 cut(s) | 1073, 1091, 1474 |
| SduI | GDGCHC | 5 cut(s) | 103, 723, 1500, 1842, 1908 |
| SfaNI | GCATC | 4 cut(s) | 858, 1140, 1728, 1933 |
| SfcI | CTRYAG | 2 cut(s) | 1974, 2163 |
| SfoI | GGCGCC | 1 cut(s) | 832 |
| Sfr274I | CTCGAG | 1 cut(s) | 1499 |
| SinI | GGWCC | 4 cut(s) | 1429, 1568, 1635, 1776 |
| SlaI | CTCGAG | 1 cut(s) | 1499 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 995, 1806 |
| SmlI | CTYRAG | 3 cut(s) | 933, 1499, 2146 |
| SmoI | CTYRAG | 3 cut(s) | 933, 1499, 2146 |
| Sse9I | AATT | 6 cut(s) | 345, 370, 569, 653, 809, 1989 |
| SsiI | CCGC | 7 cut(s) | 469, 730, 741, 938, 1293, 1300, 1632 |
| SspDI | GGCGCC | 1 cut(s) | 830 |
| SspI | AATATT | 1 cut(s) | 2133 |
| SspMI | CTAG | 1 cut(s) | 2179 |
| SstI | GAGCTC | 4 cut(s) | 723, 1500, 1842, 1908 |
| StyD4I | CCNGG | 3 cut(s) | 1071, 1089, 1472 |
| TaaI | ACNGT | 6 cut(s) | 563, 665, 1510, 1639, 1856, 2015 |
| TaqI | TCGA | 9 cut(s) | 86, 639, 750, 1194, 1454, 1500, 1668, 1824, 1908 |
| TasI | AATT | 6 cut(s) | 345, 370, 569, 653, 809, 1989 |
| TatI | WGTACW | 1 cut(s) | 216 |
| TauI | GCSGC | 2 cut(s) | 743, 941 |
| TfiI | GAWTC | 3 cut(s) | 148, 1456, 1685 |
| Tru1I | TTAA | 5 cut(s) | 377, 984, 1859, 1872, 2040 |
| Tru9I | TTAA | 5 cut(s) | 377, 984, 1859, 1872, 2040 |
| TscAI | CASTG | 3 cut(s) | 910, 1083, 1513 |
| TseFI | GTSAC | 7 cut(s) | 8, 24, 207, 296, 563, 1171, 1375 |
| TseI | GCWGC | 9 cut(s) | 589, 1108, 1135, 1186, 1249, 1478, 1946, 1973, 2162 |
| Tsp45I | GTSAC | 7 cut(s) | 8, 24, 207, 296, 563, 1171, 1375 |
| TspDTI | ATGAA | 9 cut(s) | 215, 269, 562, 755, 1673, 1698, 1754, 1834, 1976 |
| TspGWI | ACGGA | 1 cut(s) | 569 |
| TspRI | CASTG | 3 cut(s) | 910, 1083, 1513 |
| Tth111I | GACNNNGTC | 3 cut(s) | 779, 1009, 1508 |
| VpaK11BI | GGWCC | 4 cut(s) | 1429, 1568, 1635, 1776 |
| XapI | RAATTY | 2 cut(s) | 370, 569 |
| XhoI | CTCGAG | 1 cut(s) | 1499 |
| XmiI | GTMKAC | 2 cut(s) | 1194, 2170 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1689 |
| XspI | CTAG | 1 cut(s) | 2179 |
| ZraI | GACGTC | 3 cut(s) | 24, 778, 1050 |