FvH4_6g35460

CCAAT enhancer-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0008077
Physical Location & Seq
Reverse (-)
27958078 .. 27965947
7870 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g35460.t2

Sequence Viewer

Length: 3018 bp
ATGGCGGACAGAAAGAAATCAAAGAAACCCTCAAACAAAACCAACAACATCGACCACCTCAAGACCGACATAGCCTCCTTCGCTTCCTCCCTCGGCCTCTCCACCTCTCTCCCGCCCTCCGATTCTTCCGGGGGCTTCAACGACGTCGATTTCCGCAACCCCAAAAAACCCACCCCAAAACCCTCAAAACCCCAAAACCGAAACACCCACAACTCCAAACCCAATCTCTCAAAACCCACTAAACCCCCTTTCCCTGATATCAACACCAACAATGACAAGGCCAAGAGCTTCGAGAATCTTCCCAAGCTGCCCTTGATTTCCGCCGTTAATATCGGAGTGTGGTACGAAGAAGCTGAGGAGTTGGAGGGGAAAGTGGCGGTGAAGATGAAGAGAGTGGAGGCGAGGAATGAGAGGGAGTGGAGTGTTGAGGTGGGGAAGAAGAGGAAGCTTGCGGAGAGGTTGATGGCGCAGTACACGGCGGATTACGAGGCTTCCAAAGGGAAGAGTGGGGATATTAAGCTGTTGCTTACCACACAGAGGTCTGGGACTGCCTCTGATAAGATTTCGGCGTTTTCGGTTTTGGTTGGGGATGATCCCATTGCCAATTTGAGGTCCTTGGATGCCCTTTTAGGAATGGTAGCATCGAAAGTAGGAAAGCGGTACGCATTTGCAGGTTTTGATGCATTGAGGGAATTGTTTCTTACAAGTTTATTACCTGATCGCAAGCTTAAGAGCCTCTTACAGCGGCCTGTAAATGATCTTCCTGAGACAAAAGATGGTTATTCTCTTCTGCTTCTCTGGTATTGGGAGGAATCCTTGAAACAAAGGTATGAACGCTTTGTTATTGCTCTTGAGGAAGCATCAAGAGATATGTTACCTGAACTTAAAAACAAGGCATTGAAGACTATATATGTGTTACTAAAGAGTAAATCAGAACAAGAACGAAGATTACTCTCTGCGATAGTTAATAAACTGGGAGATCCGAAAAATAAGGGTGCTTCAGATGCTGATTTTCACTTATCAAACCTTTTGCGTGACCATCCAAACATGAAGGCTGTGGTGATTGCTGAGGTGGACTCTTTTCTCTTTCGGCCGCATTTAAGCATACAAGCAAAATACCACGCGGTAAACTTTTTGAGCCAAATTCAACTTAGAAATACAGGAGATGGACCAAAGGTGGCAAAAAGTTTGGTAGATGTATACTTTGCACTTTTCAAGGTACTGATTTCTGAGGCTGGTGGTGGTGATAAGACAGAGAAGACTGATAAAGTAGGGGGTAAAAAACCACCCGGTTCTCTTAAGGATGGCAAAGGGAAGAAATCGTCAGATACTCATGTTGAATTGGATTCACGTCTTCTATCAGCTCTATTAATGGGAGTCAATAGAGCATTCCCATATGTTTCAAAGAATGAGGCTGATGACCTTGTTGAGGCCCAAACGCCAACACTGTTCCATTTGGTTCATTCTACTAACTTTAATGTTGGAGTTCAAGCACTAATGCTTCTTCATCATATCTCATCTAAGAATCAAATTGTCAGTGATAGGTTTTACCGAGCCTTGTACTCAAAACTACTGCTTCCAGCTGCCATGAATACTTCCAAGGCTGAAACATTTATTGGACTCCTTCTGAGAGCAATGAAATCTGATGTCAACGTGAAGCGTACAGCTGCTTTTGCAAAACGTTTACTGCAGGTTGCCCTTCAACAGCCGCCTCAATATGCATGTGGATGCCTTTTTCTTCTTTCTGAAGTTCTTAAAGCAAGGCCACCCTTATGGAACATGGTGCTCCAAAATGAGTCAGTTGATGATGACCTTGAGCATTTTGAAGATGTGATAGAAGAAACTGACAAGGAACCCAGCCCTGTCTCAGAGAAACAAGATGTCAAGCTTGTTCATAACAGTGATGAAACAAATGATACTGCCGATTCTGATCATGATTCTTCAGAAGATGACATCGAATCTCCTGCCTCGTATTCTGAGGATGAAGCTTCCGATGAAGGAGATGAGTTCCATTTTAAAAATGATTCAAAGCACTCCAAGACGGTTCCTAATAGTAGTGTGCAACAACCACAAGTAGTATCCTCTGAGAAGACCACACTACCTGGAGGCTATGATCCACGGCACAGAGAGCCCTCATACTGCAATGCAGATCGTGTAAGCTGGTGGGAGTTGACAGTACTTGCTTCACATGTGCACCCTTCAGTTTCTACCATGGCAAAGACACTTCTCTCTGGGGCGAATATCGTCTATAATGGAAACCCACTGAATGACCTATCACTTACTGCTTTCCTAGATAAGTTTATGGAGAAAAAACCTAAGGCAAGCACATGGCATGGTGGTTCGCAAATTGAACCTGCGAAAAAGCTTGACATGACCAACCGATTCATAGGGCCCGAAATCCTCTCATTGGCTGAAGAAGATGTGCCTGCAGAAGATCTTGTCTTTCACAAGTTCTACATGAATAAAATGAATACTTCGAATAAACCAAAAAAGAAGAAGAAGAAGGCAACAGCAGAAGATGAAGATGCCGCAGAGTTGTTTGATGTGGATGGTGGTGGTGATGATGAAAGTGATAACGAAGAGATTGACAATATGCTGGATTCTGCTGGTGTTGCCATGGATGCAGATGGCGACTATGATTATGATGATCTAGACCAAGTTGCCAATGACGATGACGAAGACTTGGTTGGTAACGCCAGCGATGTCAGTGATGATGATATCGACCTGCCATCTGATATTGGAGAGGGAGAAGATTTTGATGTCACTGCAAACAGTGATGAGAGTGATGATGATGATGCTATTGATATAGGAGATGCTGAGGATGAGGAGGAAGACGAAGATGAGAATGTCCATATTGAGTGTGTTCAGGGGAAAACTAAACGGAAGCGGGGGACTGCAGCATCCCCATTCGCTAGTATGGAAGAATATGAGCATCTGTTTAACGAGGACGCCCCTGCTGAGAAGGAATCTAAAAGCAAGAAGTCGAAGCCACGAAAGAAGAGAAAGTCATCTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBF

Protein Analysis

1006

Amino Acids

111.65

Weight (kDa)

5.13

Isoelectric Point (pI)

41.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBF PF03914 490 - 717 4.3e-40 CBF/Mak21 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 147
Acc36I ACCTGC 4 cut(s) 662, 1681, 2362, 2733
AccI GTMKAC 1 cut(s) 1200
AccII CGCG 1 cut(s) 1124
AclI AACGTT 1 cut(s) 1681
AclWI GGATC 3 cut(s) 587, 974, 2108
AcoI YGGCCR 1 cut(s) 1091
AcsI RAATTY 1 cut(s) 1143
AcuI CTGAAG 5 cut(s) 984, 1767, 1926, 2184, 2433
AcyI GRCGYC 2 cut(s) 144, 2949
AfaI GTAC 7 cut(s) 344, 473, 662, 1221, 1562, 1663, 2178
AfiI CCNNNNNNNGG 4 cut(s) 537, 609, 1429, 2407
AflII CTTAAG 2 cut(s) 728, 1298
AflIII ACRYGT 1 cut(s) 2188
AjiI CACGTC 1 cut(s) 1352
AjnI CCWGG 1 cut(s) 2101
AjuI GAANNNNNNNTTGG 4 cut(s) 1599, 1631, 2670, 2702
Alw21I GWGCWC 2 cut(s) 1788, 2196
Alw26I GTCTC 2 cut(s) 761, 1870
Alw44I GTGCAC 1 cut(s) 2192
AlwI GGATC 3 cut(s) 587, 974, 2108
AlwNI CAGNNNCTG 1 cut(s) 1007
AoxI GGCC 7 cut(s) 94, 279, 746, 1091, 1431, 1763, 2390
ApaI GGGCCC 1 cut(s) 2394
ApaLI GTGCAC 1 cut(s) 2192
ApeKI GCWGC 4 cut(s) 307, 1583, 1667, 2897
ApoI RAATTY 1 cut(s) 1143
AseI ATTAAT 1 cut(s) 1370
Asp700I GAANNNNTTC 1 cut(s) 696
AspLEI GCGC 1 cut(s) 469
AspS9I GGNCC 5 cut(s) 612, 1169, 1432, 2390, 2391
AsuC2I CCSGG 2 cut(s) 130, 1290
AsuHPI GGTGA 4 cut(s) 391, 1072, 1256, 2570
AsuII TTCGAA 1 cut(s) 2477
AvaII GGWCC 2 cut(s) 612, 1169
AxyI CCTNAGG 1 cut(s) 2316
BaeGI GKGCMC 2 cut(s) 2196, 2394
BaeI ACNNNNGTAYC 2 cut(s) 1320, 1353
BanII GRGCYC 2 cut(s) 2133, 2394
BarI GAAGNNNNNNTAC 2 cut(s) 744, 776
BbsI GAAGAC 6 cut(s) 908, 1265, 1346, 2096, 2685, 2838
Bbv12I GWGCWC 2 cut(s) 1788, 2196
BbvCI CCTCAGC 3 cut(s) 354, 1068, 2817
BbvI GCAGC 4 cut(s) 294, 1570, 1654, 2909
BccI CCATC 8 cut(s) 457, 770, 1047, 1160, 1298, 2543, 2621, 2737
BceAI ACGGC 3 cut(s) 308, 492, 2135
BcgI CGANNNNNNTGC 2 cut(s) 1946, 1980
BciT130I CCWGG 1 cut(s) 2103
BciVI GTATCC 1 cut(s) 2089
BclI TGATCA 1 cut(s) 1930
BcnI CCSGG 2 cut(s) 130, 1290
BcoDI GTCTC 2 cut(s) 761, 1870
BfaI CTAG 3 cut(s) 2291, 2651, 2913
BfmI CTRYAG 3 cut(s) 1688, 2427, 2895
BfrI CTTAAG 2 cut(s) 728, 1298
BfuAI ACCTGC 4 cut(s) 662, 1681, 2362, 2733
BfuI GTATCC 1 cut(s) 2089
BglII AGATCT 1 cut(s) 2434
BisI GCNGC 8 cut(s) 308, 746, 1094, 1584, 1668, 1709, 2529, 2898
BlsI GCNGC 8 cut(s) 309, 747, 1095, 1585, 1669, 1710, 2530, 2899
BmcAI AGTACT 1 cut(s) 2178
Bme1390I CCNGG 3 cut(s) 130, 1290, 2103
Bme18I GGWCC 2 cut(s) 612, 1169
BmgBI CACGTC 1 cut(s) 1352
BmgT120I GGNCC 5 cut(s) 612, 1169, 1432, 2390, 2391
BmiI GGNNCC 3 cut(s) 1854, 2046, 2392
BmrFI CCNGG 3 cut(s) 130, 1290, 2103
BmrI ACTGGG 1 cut(s) 983
BmuI ACTGGG 1 cut(s) 983
BpiI GAAGAC 6 cut(s) 908, 1265, 1346, 2096, 2685, 2838
BplI GAGNNNNNCTC 2 cut(s) 1061, 1093
BpmI CTGGAG 1 cut(s) 2124
Bpu10I CCTNAGC 3 cut(s) 354, 1068, 2817
Bpu14I TTCGAA 1 cut(s) 2477
BpuEI CTTGAG 3 cut(s) 44, 872, 1835
BpuMI CCSGG 2 cut(s) 130, 1290
BsaBI GATNNNNATC 1 cut(s) 1929
BsaHI GRCGYC 2 cut(s) 144, 2949
BsaJI CCNNGG 7 cut(s) 91, 129, 615, 1599, 2117, 2211, 2616
BsaXI ACNNNNNCTCC 2 cut(s) 59, 89
Bsc4I CCNNNNNNNGG 4 cut(s) 537, 609, 1429, 2407
Bse1I ACTGG 1 cut(s) 978
Bse21I CCTNAGG 1 cut(s) 2316
Bse3DI GCAATG 3 cut(s) 597, 1641, 2149
Bse8I GATNNNNATC 1 cut(s) 1929
BseBI CCWGG 1 cut(s) 2103
BseDI CCNNGG 7 cut(s) 91, 129, 615, 1599, 2117, 2211, 2616
BseJI GATNNNNATC 1 cut(s) 1929
BseLI CCNNNNNNNGG 4 cut(s) 537, 609, 1429, 2407
BseMI GCAATG 3 cut(s) 597, 1641, 2149
BseNI ACTGG 1 cut(s) 978
BseRI GAGGAG 2 cut(s) 371, 2840
BseSI GKGCMC 2 cut(s) 2196, 2394
BseX3I CGGCCG 1 cut(s) 1091
BseXI GCAGC 4 cut(s) 294, 1570, 1654, 2909
BseYI CCCAGC 1 cut(s) 1856
Bsh1236I CGCG 1 cut(s) 1124
Bsh1285I CGRYCG 1 cut(s) 1094
BshFI GGCC 7 cut(s) 96, 281, 748, 1093, 1433, 1765, 2392
BsiEI CGRYCG 1 cut(s) 1094
BsiHKAI GWGCWC 2 cut(s) 1788, 2196
BsiSI CCGG 2 cut(s) 129, 1290
BslFI GGGAC 2 cut(s) 559, 2905
BslI CCNNNNNNNGG 4 cut(s) 537, 609, 1429, 2407
BsmAI GTCTC 2 cut(s) 761, 1870
BsmFI GGGAC 2 cut(s) 559, 2905
BsmI GAATGC 1 cut(s) 1388
BsnI GGCC 7 cut(s) 96, 281, 748, 1093, 1433, 1765, 2392
Bsp119I TTCGAA 1 cut(s) 2477
Bsp120I GGGCCC 1 cut(s) 2390
Bsp1286I GDGCHC 4 cut(s) 1788, 2133, 2196, 2394
Bsp143I GATC 9 cut(s) 592, 718, 757, 979, 1930, 2113, 2149, 2434, 2647
Bsp19I CCATGG 2 cut(s) 2211, 2616
BspANI GGCC 7 cut(s) 96, 281, 748, 1093, 1433, 1765, 2392
BspFNI CGCG 1 cut(s) 1124
BspHI TCATGA 1 cut(s) 1933
BspLI GGNNCC 3 cut(s) 1854, 2046, 2392
BspMAI CTGCAG 3 cut(s) 1692, 2431, 2899
BspMI ACCTGC 4 cut(s) 662, 1681, 2362, 2733
BspPI GGATC 3 cut(s) 587, 974, 2108
BspT104I TTCGAA 1 cut(s) 2477
BspTI CTTAAG 2 cut(s) 728, 1298
BsrDI GCAATG 3 cut(s) 597, 1641, 2149
BsrI ACTGG 1 cut(s) 978
BssECI CCNNGG 7 cut(s) 91, 129, 615, 1599, 2117, 2211, 2616
BssMI GATC 9 cut(s) 592, 718, 757, 979, 1930, 2113, 2149, 2434, 2647
BssNAI GTATAC 1 cut(s) 1201
BssNI GRCGYC 2 cut(s) 144, 2949
BssT1I CCWWGG 4 cut(s) 615, 1599, 2211, 2616
Bst1107I GTATAC 1 cut(s) 1201
Bst2UI CCWGG 1 cut(s) 2103
Bst4CI ACNGT 5 cut(s) 1449, 1901, 2044, 2176, 2774
Bst6I CTCTTC 6 cut(s) 383, 434, 497, 792, 2574, 2993
BstACI GRCGYC 2 cut(s) 144, 2949
BstAFI CTTAAG 2 cut(s) 728, 1298
BstBI TTCGAA 1 cut(s) 2477
BstC8I GCNNGC 5 cut(s) 450, 725, 2323, 2427, 2698
BstDSI CCRYGG 3 cut(s) 2117, 2211, 2616
BstENI CCTNNNNNAGG 1 cut(s) 1427
BstFNI CGCG 1 cut(s) 1124
BstHHI GCGC 1 cut(s) 469
BstKTI GATC 9 cut(s) 595, 721, 760, 982, 1933, 2116, 2152, 2437, 2650
BstMAI GTCTC 2 cut(s) 761, 1870
BstMBI GATC 9 cut(s) 592, 718, 757, 979, 1930, 2113, 2149, 2434, 2647
BstMCI CGRYCG 1 cut(s) 1094
BstMWI GCNNNNNNNGC 6 cut(s) 80, 1004, 1673, 2128, 2612, 2621
BstNI CCWGG 1 cut(s) 2103
BstNSI RCATGY 2 cut(s) 1725, 2192
BstSCI CCNGG 3 cut(s) 128, 1288, 2101
BstSFI CTRYAG 3 cut(s) 1688, 2427, 2895
BstSLI GKGCMC 2 cut(s) 2196, 2394
BstUI CGCG 1 cut(s) 1124
BstV1I GCAGC 4 cut(s) 294, 1570, 1654, 2909
BstV2I GAAGAC 6 cut(s) 908, 1265, 1346, 2096, 2685, 2838
BstX2I RGATCY 2 cut(s) 979, 2434
BstXI CCANNNNNNTGG 1 cut(s) 1773
BstYI RGATCY 2 cut(s) 979, 2434
BstZ17I GTATAC 1 cut(s) 1201
BstZI CGGCCG 1 cut(s) 1091
Bsu36I CCTNAGG 1 cut(s) 2316
BsuI GTATCC 1 cut(s) 2089
BsuRI GGCC 7 cut(s) 96, 281, 748, 1093, 1433, 1765, 2392
BtgI CCRYGG 3 cut(s) 2117, 2211, 2616
BtgZI GCGATG 1 cut(s) 2715
BtrI CACGTC 1 cut(s) 1352
BtsI GCAGTG 1 cut(s) 2763
BtsIMutI CAGTG 7 cut(s) 1445, 1543, 1906, 2261, 2713, 2763, 2779
BveI ACCTGC 4 cut(s) 662, 1681, 2362, 2733
Cac8I GCNNGC 5 cut(s) 450, 725, 2323, 2427, 2698
CaiI CAGNNNCTG 1 cut(s) 1007
CciI TCATGA 1 cut(s) 1933
CfoI GCGC 1 cut(s) 469
Cfr13I GGNCC 5 cut(s) 612, 1169, 1432, 2390, 2391
CseI GACGC 1 cut(s) 2957
Csp6I GTAC 7 cut(s) 343, 472, 661, 1220, 1561, 1662, 2177
CviQI GTAC 7 cut(s) 343, 472, 661, 1220, 1561, 1662, 2177
DpnI GATC 9 cut(s) 594, 720, 759, 981, 1932, 2115, 2151, 2436, 2649
DpnII GATC 9 cut(s) 592, 718, 757, 979, 1930, 2113, 2149, 2434, 2647
DraI TTTAAA 1 cut(s) 2017
EaeI YGGCCR 1 cut(s) 1091
EagI CGGCCG 1 cut(s) 1091
Eam1104I CTCTTC 6 cut(s) 383, 434, 497, 792, 2574, 2993
EarI CTCTTC 6 cut(s) 383, 434, 497, 792, 2574, 2993
EciI GGCGGA 3 cut(s) 20, 310, 494
EclXI CGGCCG 1 cut(s) 1091
Eco130I CCWWGG 4 cut(s) 615, 1599, 2211, 2616
Eco24I GRGCYC 2 cut(s) 2133, 2394
Eco32I GATATC 2 cut(s) 259, 2719
Eco47I GGWCC 2 cut(s) 612, 1169
Eco52I CGGCCG 1 cut(s) 1091
Eco57I CTGAAG 5 cut(s) 984, 1767, 1926, 2184, 2433
Eco81I CCTNAGG 1 cut(s) 2316
EcoNI CCTNNNNNAGG 1 cut(s) 1427
EcoO109I RGGNCCY 2 cut(s) 612, 2390
EcoRII CCWGG 1 cut(s) 2101
EcoRV GATATC 2 cut(s) 259, 2719
EcoT14I CCWWGG 4 cut(s) 615, 1599, 2211, 2616
EcoT22I ATGCAT 2 cut(s) 685, 1723
EcoT38I GRGCYC 2 cut(s) 2133, 2394
ErhI CCWWGG 4 cut(s) 615, 1599, 2211, 2616
FalI AAGNNNNNCTT 4 cut(s) 296, 328, 722, 754
FaqI GGGAC 2 cut(s) 559, 2905
FauI CCCGC 2 cut(s) 120, 2880
FauNDI CATATG 1 cut(s) 1396
FbaI TGATCA 1 cut(s) 1930
FblI GTMKAC 1 cut(s) 1200
Fnu4HI GCNGC 8 cut(s) 308, 746, 1094, 1584, 1668, 1709, 2529, 2898
FriOI GRGCYC 2 cut(s) 2133, 2394
Fsp4HI GCNGC 8 cut(s) 308, 746, 1094, 1584, 1668, 1709, 2529, 2898
FspBI CTAG 3 cut(s) 2291, 2651, 2913
GlaI GCGC 1 cut(s) 468
GluI GCNGC 8 cut(s) 308, 746, 1094, 1584, 1668, 1709, 2529, 2898
GsaI CCCAGC 1 cut(s) 1860
GsuI CTGGAG 1 cut(s) 2124
HaeIII GGCC 7 cut(s) 96, 281, 748, 1093, 1433, 1765, 2392
HapII CCGG 2 cut(s) 129, 1290
HgaI GACGC 1 cut(s) 2957
HhaI GCGC 1 cut(s) 469
Hin1I GRCGYC 2 cut(s) 144, 2949
Hin6I GCGC 1 cut(s) 467
HinP1I GCGC 1 cut(s) 467
HincII GTYRAC 2 cut(s) 1651, 2172
HindII GTYRAC 2 cut(s) 1651, 2172
HindIII AAGCTT 5 cut(s) 446, 725, 1886, 1986, 2363
HpaII CCGG 2 cut(s) 129, 1290
HphI GGTGA 4 cut(s) 391, 1072, 1256, 2570
Hpy166II GTNNAC 8 cut(s) 474, 1075, 1129, 1201, 1651, 1685, 2172, 2194
Hpy188III TCNNGA 7 cut(s) 61, 292, 764, 851, 864, 1934, 2651
Hpy8I GTNNAC 8 cut(s) 474, 1075, 1129, 1201, 1651, 1685, 2172, 2194
Hpy99I CGWCG 2 cut(s) 146, 149
HpyAV CCTTC 8 cut(s) 88, 1045, 1634, 1709, 1991, 2208, 2497, 2956
HpyCH4III ACNGT 5 cut(s) 1449, 1901, 2044, 2176, 2774
HpyCH4IV ACGT 4 cut(s) 144, 1351, 1653, 1681
HpyF10VI GCNNNNNNNGC 6 cut(s) 80, 1004, 1673, 2128, 2612, 2621
HpySE526I ACGT 4 cut(s) 144, 1351, 1653, 1681
Hsp92I GRCGYC 2 cut(s) 144, 2949
HspAI GCGC 1 cut(s) 467
Ksp22I TGATCA 1 cut(s) 1930
Kzo9I GATC 9 cut(s) 592, 718, 757, 979, 1930, 2113, 2149, 2434, 2647
LmnI GCTCC 1 cut(s) 1791
Lsp1109I GCAGC 4 cut(s) 294, 1570, 1654, 2909
MaeI CTAG 3 cut(s) 2291, 2651, 2913
MaeII ACGT 4 cut(s) 144, 1351, 1653, 1681
MaeIII GTNAC 5 cut(s) 873, 915, 1034, 2690, 2761
MalI GATC 9 cut(s) 594, 720, 759, 981, 1932, 2115, 2151, 2436, 2649
MboI GATC 9 cut(s) 592, 718, 757, 979, 1930, 2113, 2149, 2434, 2647
MflI RGATCY 2 cut(s) 979, 2434
MhlI GDGCHC 4 cut(s) 1788, 2133, 2196, 2394
MluCI AATT 6 cut(s) 604, 692, 1143, 1340, 1530, 2346
MlyI GAGTC 4 cut(s) 1070, 1386, 1614, 1805
MmeI TCCRAC 2 cut(s) 342, 1462
Mph1103I ATGCAT 2 cut(s) 685, 1723
MroXI GAANNNNTTC 1 cut(s) 696
MslI CAYNNNNRTG 3 cut(s) 1726, 1771, 1899
MspA1I CMGCKG 3 cut(s) 745, 1583, 1667
MspCI CTTAAG 2 cut(s) 728, 1298
MspI CCGG 2 cut(s) 129, 1290
MspR9I CCNGG 3 cut(s) 130, 1290, 2103
Mva1269I GAATGC 1 cut(s) 1388
MvaI CCWGG 1 cut(s) 2103
MvnI CGCG 1 cut(s) 1124
MwoI GCNNNNNNNGC 6 cut(s) 80, 1004, 1673, 2128, 2612, 2621
NciI CCSGG 2 cut(s) 130, 1290
NcoI CCATGG 2 cut(s) 2211, 2616
NdeI CATATG 1 cut(s) 1396
NdeII GATC 9 cut(s) 592, 718, 757, 979, 1930, 2113, 2149, 2434, 2647
NlaIV GGNNCC 3 cut(s) 1854, 2046, 2392
NmeAIII GCCGAG 1 cut(s) 72
NmuCI GTSAC 2 cut(s) 1034, 2761
NsiI ATGCAT 2 cut(s) 685, 1723
NspI RCATGY 2 cut(s) 1725, 2192
NspV TTCGAA 1 cut(s) 2477
PagI TCATGA 1 cut(s) 1933
PciI ACATGT 1 cut(s) 2188
PctI GAATGC 1 cut(s) 1388
PdmI GAANNNNTTC 1 cut(s) 696
PkrI GCNGC 8 cut(s) 309, 747, 1095, 1585, 1669, 1710, 2530, 2899
PleI GAGTC 4 cut(s) 1070, 1385, 1614, 1804
PpsI GAGTC 4 cut(s) 1070, 1385, 1614, 1804
PpuMI RGGWCCY 1 cut(s) 612
PscI ACATGT 1 cut(s) 2188
PshBI ATTAAT 1 cut(s) 1370
Psp1406I AACGTT 1 cut(s) 1681
Psp5II RGGWCCY 1 cut(s) 612
Psp6I CCWGG 1 cut(s) 2101
PspFI CCCAGC 1 cut(s) 1856
PspGI CCWGG 1 cut(s) 2101
PspN4I GGNNCC 3 cut(s) 1854, 2046, 2392
PspOMI GGGCCC 1 cut(s) 2390
PspPI GGNCC 5 cut(s) 612, 1169, 1432, 2390, 2391
PspPPI RGGWCCY 1 cut(s) 612
PsrI GAACNNNNNNTAC 2 cut(s) 933, 965
PstI CTGCAG 3 cut(s) 1692, 2431, 2899
PstNI CAGNNNCTG 1 cut(s) 1007
PsuI RGATCY 2 cut(s) 979, 2434
PvuII CAGCTG 2 cut(s) 1583, 1667
RsaI GTAC 7 cut(s) 344, 473, 662, 1221, 1562, 1663, 2178
RsaNI GTAC 7 cut(s) 343, 472, 661, 1220, 1561, 1662, 2177
RseI CAYNNNNRTG 3 cut(s) 1726, 1771, 1899
SatI GCNGC 8 cut(s) 308, 746, 1094, 1584, 1668, 1709, 2529, 2898
Sau3AI GATC 9 cut(s) 592, 718, 757, 979, 1930, 2113, 2149, 2434, 2647
Sau96I GGNCC 5 cut(s) 612, 1169, 1432, 2390, 2391
ScaI AGTACT 1 cut(s) 2178
SchI GAGTC 4 cut(s) 1070, 1386, 1614, 1805
ScrFI CCNGG 3 cut(s) 130, 1290, 2103
SduI GDGCHC 4 cut(s) 1788, 2133, 2196, 2394
SfcI CTRYAG 3 cut(s) 1688, 2427, 2895
SfuI TTCGAA 1 cut(s) 2477
SinI GGWCC 2 cut(s) 612, 1169
SmiMI CAYNNNNRTG 3 cut(s) 1726, 1771, 1899
SmlI CTYRAG 5 cut(s) 59, 728, 851, 1298, 1814
SmoI CTYRAG 5 cut(s) 59, 728, 851, 1298, 1814
Sse9I AATT 6 cut(s) 604, 692, 1143, 1340, 1530, 2346
SspMI CTAG 3 cut(s) 2291, 2651, 2913
StyD4I CCNGG 3 cut(s) 128, 1288, 2101
StyI CCWWGG 4 cut(s) 615, 1599, 2211, 2616
TaaI ACNGT 5 cut(s) 1449, 1901, 2044, 2176, 2774
TaiI ACGT 4 cut(s) 147, 1354, 1656, 1684
TaqI TCGA 8 cut(s) 51, 147, 291, 644, 1956, 2477, 2721, 2984
TaqII GACCGA 1 cut(s) 80
TasI AATT 6 cut(s) 604, 692, 1143, 1340, 1530, 2346
TatI WGTACW 3 cut(s) 471, 1560, 2176
TauI GCSGC 4 cut(s) 748, 1096, 1711, 2531
TscAI CASTG 7 cut(s) 1452, 1543, 1906, 2268, 2713, 2770, 2779
TseFI GTSAC 2 cut(s) 1034, 2761
TseI GCWGC 4 cut(s) 307, 1583, 1667, 2897
Tsp45I GTSAC 2 cut(s) 1034, 2761
TspGWI ACGGA 1 cut(s) 2896
TspRI CASTG 7 cut(s) 1452, 1543, 1906, 2268, 2713, 2770, 2779
Vha464I CTTAAG 2 cut(s) 728, 1298
VneI GTGCAC 1 cut(s) 2192
VpaK11BI GGWCC 2 cut(s) 612, 1169
VspI ATTAAT 1 cut(s) 1370
XagI CCTNNNNNAGG 1 cut(s) 1427
XapI RAATTY 1 cut(s) 1143
XbaI TCTAGA 1 cut(s) 2650
XceI RCATGY 2 cut(s) 1725, 2192
XmiI GTMKAC 1 cut(s) 1200
XmnI GAANNNNTTC 1 cut(s) 696
XspI CTAG 3 cut(s) 2291, 2651, 2913
ZraI GACGTC 1 cut(s) 145
ZrmI AGTACT 1 cut(s) 2178
Zsp2I ATGCAT 2 cut(s) 685, 1723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.