Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001880.1

Orthogroup ID

OG0008077

Physical Location & Seq

Genomic Coordinates Forward (+)

152899 .. 158592

Gene Structure 5694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001880.1_g000035.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2598 bp

atggcggacagaaagaaatctaagaaacccacaaacaacaacatcgagcacctcaagactgacatagcctccttcgcttcctccctcggcctctctacctctctccctccctctgattcttcaggcttcaacgatgtcgatttccacaaccccaaaaaaccccaacagaggcctaaaccctcaaaaccccagaattccaaaccccaaaatcgaaacacccagaacttcaaacccaatgaaaggcccaatctttcgaaacccccttttccttcagtccctgatgtcaccagcaacagtgaaaaagcaaagacctttgagaatcttccgaagctgccgttgatttcagccaccaacattggagtgtggtacgaagaagctgaagaatttgattcatatctcaggtatgaacgctttgttattgctcttgaggaagcatcaagagatatgttacctgaactaaaaaacaaggcattgaagactatatatgtattactaaagagtaaatcggagcaagagcgaagattactgtctgccctagttaataaactgggagatcctaaaaataagggtgcttcagatgctgattttcacttatcaaaccttttgcgtgaccatccaaacatgaaggctgtggtgattgatgaggtggactcttttctctttcggccgcatttaaacatacaagcaaagtaccatgcggttaactttttgagccaaattcaactaagaaataaaggagatggaccaaaggtggcaaaaagtttggtagatgtatattttgcacttttcaaggtactgatttctgaggcaggtggaggtgaaaagaccgaaaagaacgagaaagtagggggtaaaaaaccagccggttctcgtaaggatggcaaaggcaatagttcatcagattctcattttgaactggattcacgtcttctatcagctctattaatgggagtcaatagagcattcccatatgtttcaaagaatgaggctgatgatgttgttgaggcccaaacaccaacgcttttccatttggttcattctactaacttcaatgtaggagttcaagcactgatgcttcttcatcatatctcatctaagaatcaaattgtcagtgataggttttaccgagccttgtactcaaaactactccttccagctgccatgaatacttccaaggctgaaacatttattggacttcttctgagagcaatgaaatctgatgtcaatgtgaagcgtacagctgcttttgcaaaacgtctactgcaggtcgcccttcaacagccgcctcaatatgcatgtggatgcctctttcttctctctgaagttctaaaagcacggccccccttgtggaacatggtgctccaaaatgagtcagttgatgatgaccttgagcattttgaagatgtgatagaagaaaccgataacgaacccagccctgtcctggagaaacaagaagttgaacttgttcataagagtgatgaaaaaagtgataccgtcaattccgatcatgattcttcagaagatgatattgactcttccgcctcatattctgaagatgaagcttccgatgaagcagatgagtttcattttagaaatgattcaaaggactccaagacggtgcctgatagtagcgtgcagcaaccacaagtagtgtcctctgagaagacttcactacctggaggctatgatccacgacacagagagccctcttactgcaatgcagatcgtgtaagctggtgggagttgacagtacttgcttcacatgtgcacccttcagtttctaccatggcaaagacacttctctctggggcgaatattgtctataatggaaacccactgaatgacctatcacttactgcttttctggacaagtttatggagaaaaaaccaaaggcaagcacatggcatggtggttcgcaaattgaacctgtgaaaaagcttgacatgaccaaccgattcataggaccagaaatcctctcattggctgaagaagatgtacctgcagaagatctcgtctttcacaagttctacatgaataaaatgaatacttcgaagaaaccaaagaagaagaagaagaaggcaacaacagaagatgaagatgccgcgaagttgtttgatgtggatggtggtggtgatgatgagagtgataatgaagagattgacaatatgctggattctgctggtattgccatggatgcagatggcgactatgattatgatgatctagaccaagtagccaatgacgacgatgaagacttggttagtgatgtcagtgatgtcagtgatgctgatcttgacctgccctcagatattgcagagggtgaagattttgataccactgcagttagtgatgaaagtgatgatggcgatgatgctattgatataggagatgttgatgacgacgaggttgaggacgaggatgtccatattgagagtgtccaggggaaaagtaaacggaagcgtgggaaggctgcagcatccccatttgctagtctggaagaatatgagcatttgtttaacgaggacgcccctgctgagaaggaatctaaaagcaagaagaaatccaagccccgaaagaagagaaagtcgtctgattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBF

Protein Analysis

865

Amino Acids

96.29

Weight (kDa)

4.96

Isoelectric Point (pI)

45.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72440
fragaria_vesca	FvH4_6g35460 FvH4_6g35460
malus_domestica	MD09G1175700.v1.1 MD17G1151100.v1.1
prunus_persica	Prupe.3G034700_v2.0.a1 Prupe.3G034700_v2.0.a1 Prupe.3G034700_v2.0.a1
pyrus_communis	pycom09g09340 pycom09g09350 pycom17g14440
rosa_chinensis	RchiOBHm_Chr2g0147011
rosa_laevigata	RLG00000020238
rosa_multiflora	Rmu_co8429717.1_g000001 Rmu_sc0001880.1_g000035
rosa_roxburghii	Rroxscaffold_2G00099760
rosa_rugosa	Rorug02G0398000
rosa_samantha	Rh2AG455000 Rh2BG467300 Rh2CG442400 Rh2DG476500 Rh7BG367700
rosa_wichuraiana	Rw2G037120 Rw2G037220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	800
AasI	GACNNNNNNGTC	1 cut(s)	2420
Acc36I	ACCTGC	4 cut(s)	800, 1255, 2008, 2307
AccB1I	GGYRCC	1 cut(s)	1618
AccI	GTMKAC	1 cut(s)	1258
AccII	CGCG	1 cut(s)	2105
AciI	CCGC	6 cut(s)	5, 668, 698, 1283, 1539, 2103
AclWI	GGATC	2 cut(s)	548, 1682
AcoI	YGGCCR	1 cut(s)	665
AcsI	RAATTY	3 cut(s)	193, 383, 717
AcuI	CTGAAG	9 cut(s)	105, 255, 399, 558, 1341, 1500, 1572, 1758, 2007
AcyI	GRCGYC	1 cut(s)	2526
AfaI	GTAC	7 cut(s)	368, 692, 795, 1136, 1237, 1752, 1998
AfiI	CCNNNNNNNGG	5 cut(s)	168, 240, 1347, 1441, 1981
AflIII	ACRYGT	1 cut(s)	1762
AjiI	CACGTC	1 cut(s)	926
AjnI	CCWGG	3 cut(s)	1440, 1675, 2439
AjuI	GAANNNNNNNTTGG	2 cut(s)	1173, 1205
AluBI	AGCT	8 cut(s)	331, 377, 938, 1157, 1241, 1562, 1734, 1939
AluI	AGCT	8 cut(s)	331, 377, 938, 1157, 1241, 1562, 1734, 1939
Alw21I	GWGCWC	3 cut(s)	51, 1362, 1770
Alw44I	GTGCAC	1 cut(s)	1766
AlwI	GGATC	2 cut(s)	548, 1682
AlwNI	CAGNNNCTG	2 cut(s)	278, 581
AoxI	GGCC	6 cut(s)	88, 170, 242, 665, 1005, 1337
ApaLI	GTGCAC	1 cut(s)	1766
ApeKI	GCWGC	6 cut(s)	331, 1157, 1241, 1636, 2471, 2474
ApoI	RAATTY	3 cut(s)	193, 383, 717
AseI	ATTAAT	1 cut(s)	944
Asp700I	GAANNNNTTC	2 cut(s)	1464, 1597
AspS9I	GGNCC	5 cut(s)	243, 743, 1006, 1338, 1964
AsuHPI	GGTGA	5 cut(s)	277, 646, 830, 2144, 2333
AsuII	TTCGAA	2 cut(s)	254, 2051
AvaII	GGWCC	2 cut(s)	743, 1964
BaeGI	GKGCMC	1 cut(s)	1770
BanI	GGYRCC	1 cut(s)	1618
BanII	GRGCYC	1 cut(s)	1707
BarI	GAAGNNNNNNTAC	2 cut(s)	1980, 2012
BbsI	GAAGAC	4 cut(s)	482, 920, 1670, 2259
Bbv12I	GWGCWC	3 cut(s)	51, 1362, 1770
BbvI	GCAGC	6 cut(s)	318, 1144, 1228, 1648, 2458, 2486
BccI	CCATC	6 cut(s)	621, 734, 872, 2117, 2195, 2357
BceAI	ACGGC	2 cut(s)	319, 1352
BciT130I	CCWGG	3 cut(s)	1442, 1677, 2441
BfaI	CTAG	3 cut(s)	536, 2225, 2490
BfmI	CTRYAG	4 cut(s)	1262, 2001, 2340, 2472
BfuAI	ACCTGC	4 cut(s)	800, 1255, 2008, 2307
BglII	AGATCT	1 cut(s)	2008
BisI	GCNGC	9 cut(s)	332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
BlsI	GCNGC	9 cut(s)	333, 669, 1159, 1243, 1284, 1638, 2104, 2473, 2476
BmcAI	AGTACT	1 cut(s)	1752
Bme1390I	CCNGG	3 cut(s)	1442, 1677, 2441
Bme18I	GGWCC	2 cut(s)	743, 1964
BmgBI	CACGTC	1 cut(s)	926
BmgT120I	GGNCC	5 cut(s)	243, 743, 1006, 1338, 1964
BmiI	GGNNCC	2 cut(s)	1340, 1620
BmrFI	CCNGG	3 cut(s)	1442, 1677, 2441
BmrI	ACTGGG	1 cut(s)	557
BmsI	GCATC	9 cut(s)	443, 568, 1062, 1292, 2089, 2185, 2275, 2362, 2486
BmuI	ACTGGG	1 cut(s)	557
BpiI	GAAGAC	4 cut(s)	482, 920, 1670, 2259
BplI	GAGNNNNNCTC	2 cut(s)	635, 667
BpmI	CTGGAG	2 cut(s)	1463, 1698
Bpu14I	TTCGAA	2 cut(s)	254, 2051
BpuEI	CTTGAG	3 cut(s)	38, 446, 1409
BsaBI	GATNNNNATC	2 cut(s)	393, 2289
BsaHI	GRCGYC	1 cut(s)	2526
BsaJI	CCNNGG	5 cut(s)	85, 1173, 1785, 2190, 2440
BsaXI	ACNNNNNCTCC	2 cut(s)	53, 83
Bsc4I	CCNNNNNNNGG	5 cut(s)	168, 240, 1347, 1441, 1981
Bse118I	RCCGGY	1 cut(s)	863
Bse1I	ACTGG	2 cut(s)	552, 921
Bse3DI	GCAATG	2 cut(s)	1215, 1723
Bse8I	GATNNNNATC	2 cut(s)	393, 2289
BseBI	CCWGG	3 cut(s)	1442, 1677, 2441
BseDI	CCNNGG	5 cut(s)	85, 1173, 1785, 2190, 2440
BseGI	GGATG	7 cut(s)	613, 883, 1307, 2128, 2200, 2425, 2477
BseJI	GATNNNNATC	2 cut(s)	393, 2289
BseLI	CCNNNNNNNGG	5 cut(s)	168, 240, 1347, 1441, 1981
BseMI	GCAATG	2 cut(s)	1215, 1723
BseMII	CTCAG	6 cut(s)	412, 795, 1193, 1650, 2319, 2526
BseNI	ACTGG	2 cut(s)	552, 921
BseSI	GKGCMC	1 cut(s)	1770
BseX3I	CGGCCG	1 cut(s)	665
BseXI	GCAGC	6 cut(s)	318, 1144, 1228, 1648, 2458, 2486
BseYI	CCCAGC	1 cut(s)	1430
BsgI	GTGCAG	1 cut(s)	1655
Bsh1236I	CGCG	1 cut(s)	2105
Bsh1285I	CGRYCG	1 cut(s)	668
BshFI	GGCC	6 cut(s)	90, 172, 244, 667, 1007, 1339
BshNI	GGYRCC	1 cut(s)	1618
BsiEI	CGRYCG	1 cut(s)	668
BsiHKAI	GWGCWC	3 cut(s)	51, 1362, 1770
BsiSI	CCGG	1 cut(s)	864
BslFI	GGGAC	1 cut(s)	260
BslI	CCNNNNNNNGG	5 cut(s)	168, 240, 1347, 1441, 1981
BsmFI	GGGAC	1 cut(s)	260
BsmI	GAATGC	1 cut(s)	962
BsnI	GGCC	6 cut(s)	90, 172, 244, 667, 1007, 1339
Bsp119I	TTCGAA	2 cut(s)	254, 2051
Bsp1286I	GDGCHC	4 cut(s)	51, 1362, 1707, 1770
Bsp143I	GATC	7 cut(s)	553, 1504, 1687, 1723, 2008, 2221, 2290
Bsp19I	CCATGG	2 cut(s)	1785, 2190
BspACI	CCGC	6 cut(s)	5, 668, 698, 1283, 1539, 2103
BspANI	GGCC	6 cut(s)	90, 172, 244, 667, 1007, 1339
BspCNI	CTCAG	6 cut(s)	411, 796, 1194, 1651, 2318, 2527
BspFNI	CGCG	1 cut(s)	2105
BspHI	TCATGA	1 cut(s)	1507
BspLI	GGNNCC	2 cut(s)	1340, 1620
BspMAI	CTGCAG	4 cut(s)	1266, 2005, 2344, 2476
BspMI	ACCTGC	4 cut(s)	800, 1255, 2008, 2307
BspPI	GGATC	2 cut(s)	548, 1682
BspT104I	TTCGAA	2 cut(s)	254, 2051
BspT107I	GGYRCC	1 cut(s)	1618
BsrDI	GCAATG	2 cut(s)	1215, 1723
BsrFI	RCCGGY	1 cut(s)	863
BsrI	ACTGG	2 cut(s)	552, 921
BssAI	RCCGGY	1 cut(s)	863
BssECI	CCNNGG	5 cut(s)	85, 1173, 1785, 2190, 2440
BssMI	GATC	7 cut(s)	553, 1504, 1687, 1723, 2008, 2221, 2290
BssNI	GRCGYC	1 cut(s)	2526
BssT1I	CCWWGG	3 cut(s)	1173, 1785, 2190
Bst2UI	CCWGG	3 cut(s)	1442, 1677, 2441
Bst4CI	ACNGT	5 cut(s)	296, 528, 1495, 1618, 1750
Bst6I	CTCTTC	3 cut(s)	1540, 2148, 2573
BstACI	GRCGYC	1 cut(s)	2526
BstBI	TTCGAA	2 cut(s)	254, 2051
BstC8I	GCNNGC	2 cut(s)	1634, 1897
BstDEI	CTNAG	9 cut(s)	21, 398, 725, 804, 1095, 1202, 1659, 2305, 2535
BstDSI	CCRYGG	2 cut(s)	1785, 2190
BstF5I	GGATG	7 cut(s)	613, 883, 1307, 2128, 2200, 2425, 2477
BstFNI	CGCG	1 cut(s)	2105
BstKTI	GATC	7 cut(s)	556, 1507, 1690, 1726, 2011, 2224, 2293
BstMBI	GATC	7 cut(s)	553, 1504, 1687, 1723, 2008, 2221, 2290
BstMCI	CGRYCG	1 cut(s)	668
BstMWI	GCNNNNNNNGC	5 cut(s)	74, 578, 1247, 2186, 2195
BstNI	CCWGG	3 cut(s)	1442, 1677, 2441
BstNSI	RCATGY	2 cut(s)	1299, 1766
BstSCI	CCNGG	3 cut(s)	1440, 1675, 2439
BstSFI	CTRYAG	4 cut(s)	1262, 2001, 2340, 2472
BstSLI	GKGCMC	1 cut(s)	1770
BstUI	CGCG	1 cut(s)	2105
BstV1I	GCAGC	6 cut(s)	318, 1144, 1228, 1648, 2458, 2486
BstV2I	GAAGAC	4 cut(s)	482, 920, 1670, 2259
BstX2I	RGATCY	2 cut(s)	553, 2008
BstYI	RGATCY	2 cut(s)	553, 2008
BstZI	CGGCCG	1 cut(s)	665
BsuRI	GGCC	6 cut(s)	90, 172, 244, 667, 1007, 1339
BtgI	CCRYGG	2 cut(s)	1785, 2190
BtgZI	GCGATG	1 cut(s)	2382
BtrI	CACGTC	1 cut(s)	926
BtsCI	GGATG	7 cut(s)	613, 883, 1307, 2128, 2200, 2425, 2477
BtsI	GCAGTG	1 cut(s)	2337
BtsIMutI	CAGTG	7 cut(s)	301, 1067, 1117, 1835, 2278, 2287, 2337
BveI	ACCTGC	4 cut(s)	800, 1255, 2008, 2307
Cac8I	GCNNGC	2 cut(s)	1634, 1897
CaiI	CAGNNNCTG	2 cut(s)	278, 581
CciI	TCATGA	1 cut(s)	1507
Cfr10I	RCCGGY	1 cut(s)	863
Cfr13I	GGNCC	5 cut(s)	243, 743, 1006, 1338, 1964
CseI	GACGC	1 cut(s)	2534
Csp6I	GTAC	7 cut(s)	367, 691, 794, 1135, 1236, 1751, 1997
CspCI	CAANNNNNGTGG	2 cut(s)	337, 372
CviQI	GTAC	7 cut(s)	367, 691, 794, 1135, 1236, 1751, 1997
DdeI	CTNAG	9 cut(s)	21, 398, 725, 804, 1095, 1202, 1659, 2305, 2535
DpnI	GATC	7 cut(s)	555, 1506, 1689, 1725, 2010, 2223, 2292
DpnII	GATC	7 cut(s)	553, 1504, 1687, 1723, 2008, 2221, 2290
DraI	TTTAAA	1 cut(s)	675
DrdI	GACNNNNNNGTC	1 cut(s)	2420
DseDI	GACNNNNNNGTC	1 cut(s)	2420
EaeI	YGGCCR	1 cut(s)	665
EagI	CGGCCG	1 cut(s)	665
Eam1104I	CTCTTC	3 cut(s)	1540, 2148, 2573
EarI	CTCTTC	3 cut(s)	1540, 2148, 2573
EciI	GGCGGA	2 cut(s)	20, 1528
EclXI	CGGCCG	1 cut(s)	665
Eco130I	CCWWGG	3 cut(s)	1173, 1785, 2190
Eco147I	AGGCCT	1 cut(s)	172
Eco24I	GRGCYC	1 cut(s)	1707
Eco47I	GGWCC	2 cut(s)	743, 1964
Eco52I	CGGCCG	1 cut(s)	665
Eco57I	CTGAAG	9 cut(s)	105, 255, 399, 558, 1341, 1500, 1572, 1758, 2007
EcoRI	GAATTC	1 cut(s)	193
EcoRII	CCWGG	3 cut(s)	1440, 1675, 2439
EcoT14I	CCWWGG	3 cut(s)	1173, 1785, 2190
EcoT22I	ATGCAT	1 cut(s)	1297
EcoT38I	GRGCYC	1 cut(s)	1707
ErhI	CCWWGG	3 cut(s)	1173, 1785, 2190
FalI	AAGNNNNNCTT	2 cut(s)	1446, 1478
FaqI	GGGAC	1 cut(s)	260
FauNDI	CATATG	1 cut(s)	970
FblI	GTMKAC	1 cut(s)	1258
Fnu4HI	GCNGC	9 cut(s)	332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
FokI	GGATG	7 cut(s)	600, 890, 1314, 2135, 2207, 2432, 2464
FriOI	GRGCYC	1 cut(s)	1707
Fsp4HI	GCNGC	9 cut(s)	332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
FspBI	CTAG	3 cut(s)	536, 2225, 2490
GluI	GCNGC	9 cut(s)	332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
GsaI	CCCAGC	1 cut(s)	1434
GsuI	CTGGAG	2 cut(s)	1463, 1698
HaeIII	GGCC	6 cut(s)	90, 172, 244, 667, 1007, 1339
HapII	CCGG	1 cut(s)	864
HgaI	GACGC	1 cut(s)	2534
Hin1I	GRCGYC	1 cut(s)	2526
HincII	GTYRAC	2 cut(s)	703, 1746
HindII	GTYRAC	2 cut(s)	703, 1746
HindIII	AAGCTT	2 cut(s)	1560, 1937
HpaI	GTTAAC	1 cut(s)	703
HpaII	CCGG	1 cut(s)	864
HphI	GGTGA	5 cut(s)	277, 646, 830, 2144, 2333
Hpy166II	GTNNAC	6 cut(s)	649, 703, 1259, 1746, 1768, 2453
Hpy188III	TCNNGA	8 cut(s)	55, 425, 438, 1508, 1865, 2225, 2294, 2495
Hpy8I	GTNNAC	6 cut(s)	649, 703, 1259, 1746, 1768, 2453
Hpy99I	CGWCG	2 cut(s)	2249, 2405
HpyAV	CCTTC	9 cut(s)	82, 279, 619, 1160, 1283, 1782, 2071, 2461, 2533
HpyCH4III	ACNGT	5 cut(s)	296, 528, 1495, 1618, 1750
HpyCH4IV	ACGT	2 cut(s)	925, 1255
HpyF10VI	GCNNNNNNNGC	5 cut(s)	74, 578, 1247, 2186, 2195
HpyF3I	CTNAG	9 cut(s)	21, 398, 725, 804, 1095, 1202, 1659, 2305, 2535
HpySE526I	ACGT	2 cut(s)	925, 1255
Hsp92I	GRCGYC	1 cut(s)	2526
KspAI	GTTAAC	1 cut(s)	703
Kzo9I	GATC	7 cut(s)	553, 1504, 1687, 1723, 2008, 2221, 2290
LmnI	GCTCC	2 cut(s)	508, 1365
Lsp1109I	GCAGC	6 cut(s)	318, 1144, 1228, 1648, 2458, 2486
LweI	GCATC	9 cut(s)	443, 568, 1062, 1292, 2089, 2185, 2275, 2362, 2486
MaeI	CTAG	3 cut(s)	536, 2225, 2490
MaeII	ACGT	2 cut(s)	925, 1255
MaeIII	GTNAC	3 cut(s)	283, 447, 608
MalI	GATC	7 cut(s)	555, 1506, 1689, 1725, 2010, 2223, 2292
MboI	GATC	7 cut(s)	553, 1504, 1687, 1723, 2008, 2221, 2290
MflI	RGATCY	2 cut(s)	553, 2008
MhlI	GDGCHC	4 cut(s)	51, 1362, 1707, 1770
MluCI	AATT	6 cut(s)	193, 383, 717, 1104, 1498, 1920
MlyI	GAGTC	5 cut(s)	644, 960, 1379, 1526, 1601
Mph1103I	ATGCAT	1 cut(s)	1297
MroXI	GAANNNNTTC	2 cut(s)	1464, 1597
MseI	TTAA	6 cut(s)	540, 674, 702, 944, 2517, 2596
MslI	CAYNNNNRTG	3 cut(s)	359, 1300, 1473
MspA1I	CMGCKG	2 cut(s)	1157, 1241
MspI	CCGG	1 cut(s)	864
MspR9I	CCNGG	3 cut(s)	1442, 1677, 2441
Mva1269I	GAATGC	1 cut(s)	962
MvaI	CCWGG	3 cut(s)	1442, 1677, 2441
MvnI	CGCG	1 cut(s)	2105
MwoI	GCNNNNNNNGC	5 cut(s)	74, 578, 1247, 2186, 2195
NcoI	CCATGG	2 cut(s)	1785, 2190
NdeI	CATATG	1 cut(s)	970
NdeII	GATC	7 cut(s)	553, 1504, 1687, 1723, 2008, 2221, 2290
NlaIV	GGNNCC	2 cut(s)	1340, 1620
NmeAIII	GCCGAG	1 cut(s)	66
NmuCI	GTSAC	2 cut(s)	283, 608
NsiI	ATGCAT	1 cut(s)	1297
NspI	RCATGY	2 cut(s)	1299, 1766
NspV	TTCGAA	2 cut(s)	254, 2051
PagI	TCATGA	1 cut(s)	1507
PaqCI	CACCTGC	1 cut(s)	800
PceI	AGGCCT	1 cut(s)	172
PciI	ACATGT	1 cut(s)	1762
PctI	GAATGC	1 cut(s)	962
PdmI	GAANNNNTTC	2 cut(s)	1464, 1597
PfoI	TCCNGGA	1 cut(s)	1440
PkrI	GCNGC	9 cut(s)	333, 669, 1159, 1243, 1284, 1638, 2104, 2473, 2476
PleI	GAGTC	5 cut(s)	644, 959, 1378, 1526, 1601
PpsI	GAGTC	5 cut(s)	644, 959, 1378, 1526, 1601
PscI	ACATGT	1 cut(s)	1762
PshBI	ATTAAT	1 cut(s)	944
Psp6I	CCWGG	3 cut(s)	1440, 1675, 2439
PspFI	CCCAGC	1 cut(s)	1430
PspGI	CCWGG	3 cut(s)	1440, 1675, 2439
PspN4I	GGNNCC	2 cut(s)	1340, 1620
PspPI	GGNCC	5 cut(s)	243, 743, 1006, 1338, 1964
PstI	CTGCAG	4 cut(s)	1266, 2005, 2344, 2476
PstNI	CAGNNNCTG	2 cut(s)	278, 581
PsuI	RGATCY	2 cut(s)	553, 2008
PvuII	CAGCTG	2 cut(s)	1157, 1241
RsaI	GTAC	7 cut(s)	368, 692, 795, 1136, 1237, 1752, 1998
RsaNI	GTAC	7 cut(s)	367, 691, 794, 1135, 1236, 1751, 1997
RseI	CAYNNNNRTG	3 cut(s)	359, 1300, 1473
SaqAI	TTAA	6 cut(s)	540, 674, 702, 944, 2517, 2596
SatI	GCNGC	9 cut(s)	332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
Sau3AI	GATC	7 cut(s)	553, 1504, 1687, 1723, 2008, 2221, 2290
Sau96I	GGNCC	5 cut(s)	243, 743, 1006, 1338, 1964
ScaI	AGTACT	1 cut(s)	1752
SchI	GAGTC	5 cut(s)	644, 960, 1379, 1526, 1601
ScrFI	CCNGG	3 cut(s)	1442, 1677, 2441
SduI	GDGCHC	4 cut(s)	51, 1362, 1707, 1770
SfaNI	GCATC	9 cut(s)	443, 568, 1062, 1292, 2089, 2185, 2275, 2362, 2486
SfcI	CTRYAG	4 cut(s)	1262, 2001, 2340, 2472
SfuI	TTCGAA	2 cut(s)	254, 2051
SinI	GGWCC	2 cut(s)	743, 1964
SmiMI	CAYNNNNRTG	3 cut(s)	359, 1300, 1473
SmlI	CTYRAG	3 cut(s)	53, 425, 1388
SmoI	CTYRAG	3 cut(s)	53, 425, 1388
Sse9I	AATT	6 cut(s)	193, 383, 717, 1104, 1498, 1920
SseBI	AGGCCT	1 cut(s)	172
SsiI	CCGC	6 cut(s)	5, 668, 698, 1283, 1539, 2103
SspI	AATATT	1 cut(s)	1816
SspMI	CTAG	3 cut(s)	536, 2225, 2490
StuI	AGGCCT	1 cut(s)	172
StyD4I	CCNGG	3 cut(s)	1440, 1675, 2439
StyI	CCWWGG	3 cut(s)	1173, 1785, 2190
TaaI	ACNGT	5 cut(s)	296, 528, 1495, 1618, 1750
TaiI	ACGT	2 cut(s)	928, 1258
TaqI	TCGA	5 cut(s)	45, 138, 211, 254, 2051
TaqII	GACCGA	1 cut(s)	842
TasI	AATT	6 cut(s)	193, 383, 717, 1104, 1498, 1920
TatI	WGTACW	2 cut(s)	1134, 1750
TauI	GCSGC	3 cut(s)	670, 1285, 2105
Tru1I	TTAA	6 cut(s)	540, 674, 702, 944, 2517, 2596
Tru9I	TTAA	6 cut(s)	540, 674, 702, 944, 2517, 2596
TscAI	CASTG	7 cut(s)	301, 1074, 1117, 1842, 2278, 2287, 2344
TseFI	GTSAC	2 cut(s)	283, 608
TseI	GCWGC	6 cut(s)	331, 1157, 1241, 1636, 2471, 2474
Tsp45I	GTSAC	2 cut(s)	283, 608
TspGWI	ACGGA	1 cut(s)	2470
TspRI	CASTG	7 cut(s)	301, 1074, 1117, 1842, 2278, 2287, 2344
VneI	GTGCAC	1 cut(s)	1766
VpaK11BI	GGWCC	2 cut(s)	743, 1964
VspI	ATTAAT	1 cut(s)	944
XapI	RAATTY	3 cut(s)	193, 383, 717
XbaI	TCTAGA	1 cut(s)	2224
XceI	RCATGY	2 cut(s)	1299, 1766
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1438
XmiI	GTMKAC	1 cut(s)	1258
XmnI	GAANNNNTTC	2 cut(s)	1464, 1597
XspI	CTAG	3 cut(s)	536, 2225, 2490
ZrmI	AGTACT	1 cut(s)	1752
Zsp2I	ATGCAT	1 cut(s)	1297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.