MD09G1175700.v1.1

CCAAT enhancer-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0008077
Physical Location & Seq
Forward (+)
14975062 .. 14983601
8540 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1175700.v1.1.491

Sequence Viewer

Length: 3129 bp
ATGGCGGATTCTAAATCAAAGAAATCCGCTAGCAACCCAGAAGACATAGAGCACCTCCGGTCCGACGTAGCCTCCTTCGCTTCCTCTCTCGGTCTCGCAACCTCTCTCCCTTCCTCCGGCTTCAACGATGTCGATTTTCGCAATCCCGGTCCCAAAAAACCCCAAAGGAAGTCCAAACCAGCTCCAATCCCAAACCCCACCAAAAACCAGAAGTCAAACAAGCCGAATTTCAAACCCAATGAAAACCAGAAGCCGAAACTCACACTTTCTTCACTGGAGGAAAACAGCAGCAAGGACAAAGCGAGAAACTTCGAGAAGTTCAAGAACCTCCCGAAGCTGCCATTGATGTCGGCGAACAAATTGGGGGTGTGGTATGAGGAAGCTGAGGAATTGGAAGGCAAAGTGCTTGTGGGTGGGAAGAAAGTGGAGGTGAAGAATGCGGAGGAGTGGAAGGGTGTGGTGGCAAAGAAGAGAGAGCTTGGAGAGAGGTTAATGGCGCAGTACGTAGCGGACTACGAGTCATCGAAAGGGAAGAGTGGGGATATTAAGCTTTTGCTTACCACACAGAGGTCCGGAACTGCATCGGATAAGATATCGGCATTTTCGGTGTTGGTTGGGGATAATCCCATTGCCAACATGAGGTCCCTTGACGCACTTATAGGAATGGTGACATCCAAAGTGGGAAAGCGATATGCATTTGCAGGTTTTGAAGCATTGAGAGAATTGTTTCTTACAAGCTTATTACCTGATCGCAAGCTTAAGAACCTCATGCAGCGGCCATTAAATCATGTTCCTGAAACAAAAGATGGTTATTCTCTTCTTCTTCTATGGTATTGGGAGGAGTGCTTGAAACAAAGGTATGAACGCTATGTTTTTGCTCTTGAGGAGGCATCAAAAGATATGTTACCTGAACTTAAAAACAAGGCATTGAAGACTATATACGTGCTGCTAAAGAATAAATCAGAGCAGGAGCGTAGATTACTGTCTGCGCTAGTTAACAAACTGGGAGATCCTAAAAATAAGGGGGCATCTGATGCTGATTTTCACTTATCAAACCTTTTGTCCGATCATCCAAACATGAAGGCAGTGGTGATCGACGAGGTGGACTCTTTTCTCTTTCGCCCACGTTTGACTCCACAAGCAAAATATCATGCAGTTAACTTTCTGAGCCAAATGCGTCTAACTCATAAAGGAGATGGACCAAAGGTGGCAAAACGTTTAATTGATGTTTATTTTTCACTTTTCAAGGTACTTATTAATGAGGCTGCTGCTGGTGAAAAGATGGATAAAAAAGGGAAAGCATGGTCTAAAAAGCCACTCAGTTCTAATGAGGATAAGAGTTCATCGGATTCTCATGTTGAATTGGATTCGCGCCTTCTGTCAGCTCTACTGGTGGGAGTCAATAGAGCATTTCCCTTTGTCTCTAGCAATGAGGCTGATGACATTGTTGAGGTCCAAACACCAATGCTTTTCCAGCTGGTCCATTCTAAGAATTTTAATGTAGGAGTTCAAGCATTGATGCTTCTCGATAAGATCTCTTCTAAGAATCAAATCGTCAGTGATAGGTTTTACAGGGCCTTGTACTCAAAACTACTACTTCCAGCTGCCATGAATACTTCCAAGGCAGAAATGTTTATCGGACTTATTCTGAGAGCAATGAAAAATGATCTGAACTTGAAGCGTGCAGCTGCTTTCGCAAAGCGTGTATTGCAGGTTGCGCTTCAGCAGCCACCTCAATATGCATGTGGATGCCTCTTCCTCCTTTCAGAAGTTCTTAAGGCAAGACCCCCATTATGGAACATGGTGCTCCAGAATGAGTCACTTGATGATGAACTTGAGCATTTTGAAGATGTTCGAGAAGAAACTGATGATAACCCCACCCCTGTCCCAGAGAAACAGGAACTCGATGTTGAGCTTGTACACAGCAATGATGCTGCCAATTCTGACCATGATTCTTCAGAAGATGATAACGAATCCACTGCCTCTTATTCTGAAGGTGAAGGTTCTGATGAAGCAGAGGAGTTTTTTGTGACAAAAGATCGAAATGATTCCAAACCAATCCCTGCTAGTAATGTGCAACCACCACAAGCATCATCTGAGAAGCCTCGCTTGCCTGGAGGCTATGATCCACGACGCAGAGAACCTTCTTATTGTAATGCGGATCGTGTGAGCTGGTGGGAGCTGACAGTACTTGCTTCACATGTGCACCCTTCGGTTTCAACCATGGCAAAGACCCTACTCTCTGGGGCGAACATTGTCTACAATGGAAACCCGCTGAATGACCTATCACTTGCTGCTTTTCTGGACAAGTTTATGGAGAAGAAACCAAAGCAAGGCGCATGGCATGGTGGTTCACAAATTGAACCTGTGAAAAAGCTTGACATGACCAACCAATTAATCGGATCAGAGATACTCTCATTGGCTGAGGAAGATGTAGCCCCGGAAGATCTTGTCTTCCACAAGTTCTATATGAACAAGATGAATTCTTCAAAGAAACCAAAGAAGAAAAAGAAGAAGGCAGCAGAAGATGAAGGCGCTGCAGATTTGTTCGACGTGGATGGTGGTGGTGGTGATGACAGCGATAACGAAGAGATTGACAATATGCTGGATTCCGCTGGTGTTTCTATTGAAGCAGATGGTGACTATGATTACGATGATCTGGACCAAGTTGCCAATGAAGATGATGAAGACTTGGTTGCTAATCTCAGTGATACTGAGCCGGACCTGCCCTCAGACTGCGGGGAGGGAGAAGACTTTGATGGCATTGTGGACGATAGCCAGAGTGACGATGACGACAACATTGATATAGGAGATGTAGACGACAACGACATTGACATAGGTGATGCAGACGACGACGACATTGACATAGGTGATGCAGACGATGACGACATTGACATAGGTGATGCAGACGACGACGACATTGACATAGGTGATGCAGATGACGGCATTGACGAGGATGAGGGGAAGAATGTGAAAAGCAAAAGTAAACGGAAGCGAGGGAAGTCTGGAGCATCCCCGTTTGCTAGTCTTGAAGAATATGAGCATCTGATGAACGACCACGTTCCTGCTGATAAGGAATCTAGAAAAAAGAAGCCGAAATCACGAAAGAAGAGAAAGTCATCCGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBF

Protein Analysis

1043

Amino Acids

115.79

Weight (kDa)

4.92

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBF PF03914 503 - 743 1.8e-43 CBF/Mak21 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 692, 1702, 2733
AccI GTMKAC 2 cut(s) 2259, 2817
AccII CGCG 1 cut(s) 1372
AccIII TCCGGA 1 cut(s) 572
AciI CCGC 9 cut(s) 5, 27, 440, 509, 775, 2159, 2273, 2613, 2739
AclI AACGTT 1 cut(s) 1216
AclWI GGATC 4 cut(s) 1004, 2120, 2169, 2410
AcoI YGGCCR 1 cut(s) 776
AcsI RAATTY 3 cut(s) 226, 1492, 2482
AcuI CTGAAG 3 cut(s) 1706, 1941, 2013
AfaI GTAC 5 cut(s) 503, 1251, 1583, 1920, 2190
AfiI CCNNNNNNNGG 5 cut(s) 116, 567, 639, 1794, 2333
AflII CTTAAG 2 cut(s) 758, 1775
AflIII ACRYGT 1 cut(s) 2200
AhdI GACNNNNNGTC 1 cut(s) 517
AjiI CACGTC 1 cut(s) 2554
AjnI CCWGG 1 cut(s) 2113
Alw21I GWGCWC 3 cut(s) 54, 1809, 2208
Alw26I GTCTC 2 cut(s) 98, 1426
Alw44I GTGCAC 1 cut(s) 2204
AlwI GGATC 4 cut(s) 1004, 2120, 2169, 2410
Aor13HI TCCGGA 1 cut(s) 572
AoxI GGCC 2 cut(s) 776, 1575
ApaLI GTGCAC 1 cut(s) 2204
ApoI RAATTY 3 cut(s) 226, 1492, 2482
ArsI GACNNNNNNTTYG 2 cut(s) 1046, 1078
AseI ATTAAT 2 cut(s) 1257, 2396
Asp700I GAANNNNTTC 3 cut(s) 726, 1851, 2047
AspLEI GCGC 6 cut(s) 499, 991, 1374, 1720, 2339, 2537
AsuC2I CCSGG 2 cut(s) 147, 2441
AsuNHI GCTAGC 1 cut(s) 29
AvaII GGWCC 9 cut(s) 60, 149, 570, 642, 1199, 1453, 1480, 2662, 2722
BaeGI GKGCMC 1 cut(s) 2208
BarI GAAGNNNNNNTAC 2 cut(s) 923, 955
BbsI GAAGAC 5 cut(s) 48, 938, 2446, 2694, 2757
Bbv12I GWGCWC 3 cut(s) 54, 1809, 2208
BbvCI CCTCAGC 2 cut(s) 384, 2424
BccI CCATC 6 cut(s) 800, 1190, 1276, 2552, 2630, 2753
BceAI ACGGC 1 cut(s) 2959
BcgI CGANNNNNNTGC 2 cut(s) 1961, 1995
BciT130I CCWGG 1 cut(s) 2115
BcnI CCSGG 2 cut(s) 147, 2441
BcoDI GTCTC 2 cut(s) 98, 1426
BfaI CTAG 6 cut(s) 30, 992, 1425, 2067, 3024, 3081
BfmI CTRYAG 1 cut(s) 2538
BfoI RGCGCY 1 cut(s) 2538
BfrI CTTAAG 2 cut(s) 758, 1775
BfuAI ACCTGC 3 cut(s) 692, 1702, 2733
BglII AGATCT 2 cut(s) 1533, 2446
BmcAI AGTACT 1 cut(s) 2190
Bme1390I CCNGG 3 cut(s) 147, 2115, 2441
Bme18I GGWCC 9 cut(s) 60, 149, 570, 642, 1199, 1453, 1480, 2662, 2722
BmeRI GACNNNNNGTC 1 cut(s) 517
BmgBI CACGTC 1 cut(s) 2554
BmiI GGNNCC 2 cut(s) 151, 644
BmrFI CCNGG 3 cut(s) 147, 2115, 2441
BmrI ACTGGG 1 cut(s) 1013
BmtI GCTAGC 1 cut(s) 33
BmuI ACTGGG 1 cut(s) 1013
BpiI GAAGAC 5 cut(s) 48, 938, 2446, 2694, 2757
BplI GAGNNNNNCTC 4 cut(s) 1091, 1123, 2399, 2431
BpmI CTGGAG 4 cut(s) 296, 1793, 2136, 3027
Bpu10I CCTNAGC 2 cut(s) 384, 2424
BpuEI CTTGAG 2 cut(s) 902, 1856
BpuMI CCSGG 2 cut(s) 147, 2441
BsaAI YACGTR 2 cut(s) 505, 943
BsaI GGTCTC 1 cut(s) 98
BsaJI CCNNGG 3 cut(s) 1620, 2223, 2439
BsaWI WCCGGW 2 cut(s) 57, 572
BsaXI ACNNNNNCTCC 2 cut(s) 56, 86
Bsc4I CCNNNNNNNGG 5 cut(s) 116, 567, 639, 1794, 2333
Bse1I ACTGG 3 cut(s) 279, 1008, 1395
Bse3DI GCAATG 4 cut(s) 627, 1435, 1662, 1933
BseAI TCCGGA 1 cut(s) 572
BseBI CCWGG 1 cut(s) 2115
BseDI CCNNGG 3 cut(s) 1620, 2223, 2439
BseGI GGATG 7 cut(s) 671, 1069, 1754, 2563, 2962, 3011, 3119
BseLI CCNNNNNNNGG 5 cut(s) 116, 567, 639, 1794, 2333
BseMI GCAATG 4 cut(s) 627, 1435, 1662, 1933
BseMII CTCAG 9 cut(s) 375, 1157, 1333, 1640, 2088, 2415, 2706, 2719, 2745
BseNI ACTGG 3 cut(s) 279, 1008, 1395
BseRI GAGGAG 4 cut(s) 458, 854, 899, 2033
BseSI GKGCMC 1 cut(s) 2208
BsgI GTGCAG 1 cut(s) 1704
Bsh1236I CGCG 1 cut(s) 1372
BshFI GGCC 2 cut(s) 778, 1577
BsiHKAI GWGCWC 3 cut(s) 54, 1809, 2208
BsiSI CCGG 6 cut(s) 58, 117, 147, 573, 2441, 2720
BslFI GGGAC 3 cut(s) 135, 628, 1871
BslI CCNNNNNNNGG 5 cut(s) 116, 567, 639, 1794, 2333
BsmAI GTCTC 2 cut(s) 98, 1426
BsmFI GGGAC 3 cut(s) 135, 628, 1871
BsmI GAATGC 1 cut(s) 442
BsnI GGCC 2 cut(s) 778, 1577
Bso31I GGTCTC 1 cut(s) 98
Bsp1286I GDGCHC 3 cut(s) 54, 1809, 2208
Bsp13I TCCGGA 1 cut(s) 572
Bsp1407I TGTACA 1 cut(s) 1918
Bsp19I CCATGG 1 cut(s) 2223
BspACI CCGC 9 cut(s) 5, 27, 440, 509, 775, 2159, 2273, 2613, 2739
BspANI GGCC 2 cut(s) 778, 1577
BspCNI CTCAG 9 cut(s) 376, 1158, 1332, 1641, 2089, 2416, 2707, 2718, 2744
BspEI TCCGGA 1 cut(s) 572
BspFNI CGCG 1 cut(s) 1372
BspLI GGNNCC 2 cut(s) 151, 644
BspMAI CTGCAG 1 cut(s) 2542
BspMI ACCTGC 3 cut(s) 692, 1702, 2733
BspOI GCTAGC 1 cut(s) 33
BspPI GGATC 4 cut(s) 1004, 2120, 2169, 2410
BspTI CTTAAG 2 cut(s) 758, 1775
BspTNI GGTCTC 1 cut(s) 98
BsrDI GCAATG 4 cut(s) 627, 1435, 1662, 1933
BsrGI TGTACA 1 cut(s) 1918
BsrI ACTGG 3 cut(s) 279, 1008, 1395
BssECI CCNNGG 3 cut(s) 1620, 2223, 2439
BssT1I CCWWGG 2 cut(s) 1620, 2223
Bst2UI CCWGG 1 cut(s) 2115
Bst4CI ACNGT 2 cut(s) 984, 2188
Bst6I CTCTTC 7 cut(s) 464, 527, 822, 1543, 1760, 2583, 3104
BstAFI CTTAAG 2 cut(s) 758, 1775
BstAPI GCANNNNNTGC 1 cut(s) 1034
BstAUI TGTACA 1 cut(s) 1918
BstBAI YACGTR 2 cut(s) 505, 943
BstC8I GCNNGC 4 cut(s) 31, 755, 1683, 2111
BstDSI CCRYGG 1 cut(s) 2223
BstF5I GGATG 7 cut(s) 671, 1069, 1754, 2563, 2962, 3011, 3119
BstFNI CGCG 1 cut(s) 1372
BstH2I RGCGCY 1 cut(s) 2538
BstHHI GCGC 6 cut(s) 499, 991, 1374, 1720, 2339, 2537
BstMAI GTCTC 2 cut(s) 98, 1426
BstMWI GCNNNNNNNGC 9 cut(s) 77, 1034, 1474, 1694, 1708, 1717, 1726, 2110, 2725
BstNI CCWGG 1 cut(s) 2115
BstNSI RCATGY 2 cut(s) 1746, 2204
BstSCI CCNGG 3 cut(s) 145, 2113, 2439
BstSFI CTRYAG 1 cut(s) 2538
BstSLI GKGCMC 1 cut(s) 2208
BstSNI TACGTA 1 cut(s) 505
BstUI CGCG 1 cut(s) 1372
BstV2I GAAGAC 5 cut(s) 48, 938, 2446, 2694, 2757
BstX2I RGATCY 3 cut(s) 1009, 1533, 2446
BstYI RGATCY 3 cut(s) 1009, 1533, 2446
BsuRI GGCC 2 cut(s) 778, 1577
BtgI CCRYGG 1 cut(s) 2223
BtrI CACGTC 1 cut(s) 2554
BtsCI GGATG 7 cut(s) 671, 1069, 1754, 2563, 2962, 3011, 3119
BtsI GCAGTG 2 cut(s) 1092, 1977
BtsIMutI CAGTG 5 cut(s) 272, 1092, 1564, 1977, 2713
BveI ACCTGC 3 cut(s) 692, 1702, 2733
Cac8I GCNNGC 4 cut(s) 31, 755, 1683, 2111
CfoI GCGC 6 cut(s) 499, 991, 1374, 1720, 2339, 2537
CpoI CGGWCCG 1 cut(s) 60
CseI GACGC 3 cut(s) 659, 1166, 2142
Csp6I GTAC 5 cut(s) 502, 1250, 1582, 1919, 2189
CspI CGGWCCG 1 cut(s) 60
CviQI GTAC 5 cut(s) 502, 1250, 1582, 1919, 2189
DriI GACNNNNNGTC 1 cut(s) 517
EaeI YGGCCR 1 cut(s) 776
Eam1104I CTCTTC 7 cut(s) 464, 527, 822, 1543, 1760, 2583, 3104
Eam1105I GACNNNNNGTC 1 cut(s) 517
EarI CTCTTC 7 cut(s) 464, 527, 822, 1543, 1760, 2583, 3104
EciI GGCGGA 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 505
Eco130I CCWWGG 2 cut(s) 1620, 2223
Eco31I GGTCTC 1 cut(s) 98
Eco32I GATATC 1 cut(s) 594
Eco47I GGWCC 9 cut(s) 60, 149, 570, 642, 1199, 1453, 1480, 2662, 2722
Eco57I CTGAAG 3 cut(s) 1706, 1941, 2013
EcoO109I RGGNCCY 2 cut(s) 642, 1575
EcoRI GAATTC 1 cut(s) 2482
EcoRII CCWGG 1 cut(s) 2113
EcoRV GATATC 1 cut(s) 594
EcoT14I CCWWGG 2 cut(s) 1620, 2223
EcoT22I ATGCAT 2 cut(s) 697, 1744
ErhI CCWWGG 2 cut(s) 1620, 2223
FalI AAGNNNNNCTT 2 cut(s) 2093, 2125
FaqI GGGAC 3 cut(s) 135, 628, 1871
FauI CCCGC 2 cut(s) 2280, 2732
FblI GTMKAC 2 cut(s) 2259, 2817
FokI GGATG 7 cut(s) 658, 1056, 1761, 2570, 2969, 2998, 3106
FspBI CTAG 6 cut(s) 30, 992, 1425, 2067, 3024, 3081
GlaI GCGC 6 cut(s) 498, 990, 1373, 1719, 2338, 2536
GsuI CTGGAG 4 cut(s) 296, 1793, 2136, 3027
HaeII RGCGCY 1 cut(s) 2538
HaeIII GGCC 2 cut(s) 778, 1577
HapII CCGG 6 cut(s) 58, 117, 147, 573, 2441, 2720
HgaI GACGC 3 cut(s) 659, 1166, 2142
HhaI GCGC 6 cut(s) 499, 991, 1374, 1720, 2339, 2537
Hin6I GCGC 6 cut(s) 497, 989, 1372, 1718, 2337, 2535
HinP1I GCGC 6 cut(s) 497, 989, 1372, 1718, 2337, 2535
HincII GTYRAC 2 cut(s) 997, 1159
HindII GTYRAC 2 cut(s) 997, 1159
HindIII AAGCTT 4 cut(s) 548, 736, 755, 2375
HpaI GTTAAC 2 cut(s) 997, 1159
HpaII CCGG 6 cut(s) 58, 117, 147, 573, 2441, 2720
Hpy99I CGWCG 8 cut(s) 68, 1100, 2136, 2555, 2855, 2858, 2915, 2918
HpyCH4III ACNGT 2 cut(s) 984, 2188
HpyCH4IV ACGT 7 cut(s) 66, 504, 942, 1126, 1216, 2553, 3060
HpyF10VI GCNNNNNNNGC 9 cut(s) 77, 1034, 1474, 1694, 1708, 1717, 1726, 2110, 2725
HpySE526I ACGT 7 cut(s) 66, 504, 942, 1126, 1216, 2553, 3060
HspAI GCGC 6 cut(s) 497, 989, 1372, 1718, 2337, 2535
Kpn2I TCCGGA 1 cut(s) 572
KspAI GTTAAC 2 cut(s) 997, 1159
LmnI GCTCC 5 cut(s) 187, 970, 1812, 2179, 3008
MaeI CTAG 6 cut(s) 30, 992, 1425, 2067, 3024, 3081
MaeII ACGT 7 cut(s) 66, 504, 942, 1126, 1216, 2553, 3060
MaeIII GTNAC 6 cut(s) 667, 903, 1818, 2029, 2639, 2783
MflI RGATCY 3 cut(s) 1009, 1533, 2446
MhlI GDGCHC 3 cut(s) 54, 1809, 2208
MlyI GAGTC 5 cut(s) 527, 1100, 1126, 1407, 1826
MmeI TCCRAC 1 cut(s) 87
Mph1103I ATGCAT 2 cut(s) 697, 1744
MroI TCCGGA 1 cut(s) 572
MroXI GAANNNNTTC 3 cut(s) 726, 1851, 2047
MslI CAYNNNNRTG 2 cut(s) 1747, 1926
MspA1I CMGCKG 6 cut(s) 775, 1477, 1604, 1688, 2275, 2615
MspCI CTTAAG 2 cut(s) 758, 1775
MspI CCGG 6 cut(s) 58, 117, 147, 573, 2441, 2720
MspR9I CCNGG 3 cut(s) 147, 2115, 2441
Mva1269I GAATGC 1 cut(s) 442
MvaI CCWGG 1 cut(s) 2115
MvnI CGCG 1 cut(s) 1372
MwoI GCNNNNNNNGC 9 cut(s) 77, 1034, 1474, 1694, 1708, 1717, 1726, 2110, 2725
NciI CCSGG 2 cut(s) 147, 2441
NcoI CCATGG 1 cut(s) 2223
NheI GCTAGC 1 cut(s) 29
NlaIV GGNNCC 2 cut(s) 151, 644
NmuCI GTSAC 5 cut(s) 667, 1818, 2029, 2639, 2783
NsiI ATGCAT 2 cut(s) 697, 1744
NspI RCATGY 2 cut(s) 1746, 2204
PciI ACATGT 1 cut(s) 2200
PcsI WCGNNNNNNNCGW 1 cut(s) 2949
PctI GAATGC 1 cut(s) 442
PdmI GAANNNNTTC 3 cut(s) 726, 1851, 2047
PfeI GAWTC 9 cut(s) 8, 1349, 1367, 1546, 1952, 1973, 2048, 2609, 3077
PleI GAGTC 5 cut(s) 526, 1100, 1126, 1406, 1825
PpsI GAGTC 5 cut(s) 526, 1100, 1126, 1406, 1825
Ppu21I YACGTR 2 cut(s) 505, 943
PpuMI RGGWCCY 1 cut(s) 642
PscI ACATGT 1 cut(s) 2200
PshBI ATTAAT 2 cut(s) 1257, 2396
Psp1406I AACGTT 1 cut(s) 1216
Psp5II RGGWCCY 1 cut(s) 642
Psp6I CCWGG 1 cut(s) 2113
PspGI CCWGG 1 cut(s) 2113
PspN4I GGNNCC 2 cut(s) 151, 644
PspPPI RGGWCCY 1 cut(s) 642
PsrI GAACNNNNNNTAC 2 cut(s) 2243, 2275
PstI CTGCAG 1 cut(s) 2542
PsuI RGATCY 3 cut(s) 1009, 1533, 2446
PvuII CAGCTG 3 cut(s) 1477, 1604, 1688
RsaI GTAC 5 cut(s) 503, 1251, 1583, 1920, 2190
RsaNI GTAC 5 cut(s) 502, 1250, 1582, 1919, 2189
RseI CAYNNNNRTG 2 cut(s) 1747, 1926
Rsr2I CGGWCCG 1 cut(s) 60
RsrII CGGWCCG 1 cut(s) 60
ScaI AGTACT 1 cut(s) 2190
SchI GAGTC 5 cut(s) 527, 1100, 1126, 1407, 1826
ScrFI CCNGG 3 cut(s) 147, 2115, 2441
SduI GDGCHC 3 cut(s) 54, 1809, 2208
SfcI CTRYAG 1 cut(s) 2538
SinI GGWCC 9 cut(s) 60, 149, 570, 642, 1199, 1453, 1480, 2662, 2722
SmiMI CAYNNNNRTG 2 cut(s) 1747, 1926
SmlI CTYRAG 4 cut(s) 758, 881, 1775, 1835
SmoI CTYRAG 4 cut(s) 758, 881, 1775, 1835
SnaBI TACGTA 1 cut(s) 505
SsiI CCGC 9 cut(s) 5, 27, 440, 509, 775, 2159, 2273, 2613, 2739
SspMI CTAG 6 cut(s) 30, 992, 1425, 2067, 3024, 3081
StyD4I CCNGG 3 cut(s) 145, 2113, 2439
StyI CCWWGG 2 cut(s) 1620, 2223
TaaI ACNGT 2 cut(s) 984, 2188
TaiI ACGT 7 cut(s) 69, 507, 945, 1129, 1219, 2556, 3063
TaqI TCGA 9 cut(s) 132, 312, 524, 1095, 1527, 1855, 1905, 2041, 2550
TaqII GACCGA 1 cut(s) 80
TatI WGTACW 3 cut(s) 1581, 1918, 2188
TauI GCSGC 1 cut(s) 778
TfiI GAWTC 9 cut(s) 8, 1349, 1367, 1546, 1952, 1973, 2048, 2609, 3077
TscAI CASTG 5 cut(s) 279, 1092, 1564, 1984, 2713
TseFI GTSAC 5 cut(s) 667, 1818, 2029, 2639, 2783
Tsp45I GTSAC 5 cut(s) 667, 1818, 2029, 2639, 2783
TspGWI ACGGA 1 cut(s) 3004
TspRI CASTG 5 cut(s) 279, 1092, 1564, 1984, 2713
Vha464I CTTAAG 2 cut(s) 758, 1775
VneI GTGCAC 1 cut(s) 2204
VpaK11BI GGWCC 9 cut(s) 60, 149, 570, 642, 1199, 1453, 1480, 2662, 2722
VspI ATTAAT 2 cut(s) 1257, 2396
XapI RAATTY 3 cut(s) 226, 1492, 2482
XbaI TCTAGA 1 cut(s) 3080
XceI RCATGY 2 cut(s) 1746, 2204
XmiI GTMKAC 2 cut(s) 2259, 2817
XmnI GAANNNNTTC 3 cut(s) 726, 1851, 2047
XspI CTAG 6 cut(s) 30, 992, 1425, 2067, 3024, 3081
ZrmI AGTACT 1 cut(s) 2190
Zsp2I ATGCAT 2 cut(s) 697, 1744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.