RLG00000020238

CCAAT enhancer-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0008077
Physical Location & Seq
Reverse (-)
62719296 .. 62726343
7048 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020238

Sequence Viewer

Length: 3075 bp
ATGGCGGACAGAAAGAAATCTAAGAAACCCACAAACAACAACATCGAGCACCTCAAGACTGACATAGCCTCCTTTGCTTCCTCCCTCGGCCTCTCTACCTCTCTCCCTCCCTCTGATTCTTCAGGCTTCAACGATGTCGATTTCCGCAACCCCAAAAAACCCCAACAGAGGCCTAAACCCTCAAAACCCCAGAACCGAAACACCCAGAATTCCAAACCCCAAAATGGAAACACCCAGAACTTCAAAACCAATGAAAGGCCCAATCTTTCGAAACCCCCTTTTCCTTCACTCCCTGATGTCACCAGCAACAGTGAAAAAGCAAAGACCTTTGAGAATCTTCCGAAGCTGCCGTTGATTTCAACCACCAACATTGGAGTGTGGTACGAAGAAGCTGAAGAATTGGAAGGCAAAGTGGTTGGGAAGATGAAGAAAGCCGAGGCAAGGAGTGACAAGGAGTGGAGTGGTGAGGTGGCCAAGAAGCGAAAGCTTGGAGAGAGGTTGATGGCACAGTACACGGCGGATTACGAGGCTTCGAAAGGGAAGAGTGGGGATATTAAGCTGTTGCTGACCACACAGAGGTCAGGGACTGCTTCTGATAAGATTTCGGCGTTTTCGGTGTTGGTTGGGGATGATCCCATTGCCAATTTGAGGTCTTTGGATGCACTTTTAGGAATGGTAGCATCAAAAGTAGGGAAGCGATACGCATTTGCGGGTTTTGATGCATTGAGGGAGTTGTTTCTTACAAGTTTATTACCCGATCGTAAGCTTAAGAGCCTCTTACAGCGGCCTTTAAATGATCTTCCTGAGTCAAAAGATGGTTATTCTCTTCTGCTTCTGTGGTATTGGGAGGAATGCTTGAAACAAAGGTATGAACGTTTTGTTATTGCTCTTGAGGAAGCATCAAGAGATATGTTACCTGAACTCAAAAACAAGGCATTGAAGACTATATATGTATTACTAAAGAGTAAATCGGAGCAAGAGCGAAGATTACTGTCTGCCCTAGTTAATAAACTGGGAGATCCTAAAAATAAAGGTGCTTCAGATGCTGATTTTCACTTATCAAACCTTTTGCGTGACCATCCAAACATGAAGGCTGTGGTGATTGATGAGGTGGACTCTTTTCTCTTTCGGCCGCATTTAAACATACAAGCAAAGTACCATGCGGTTAACTTTTTGAGCCAAATTCAACTAAGAAATAAAGGAGATGGACCAAAGGTGGCAAAAAGTTTGGTAGATGTATATTTTGCACTTTTCAAGGTACTGATTTCTGAGGCAGGTGGAGGTGAAAGGACCGAAAAGAACGAGAAAGCAGGGGGTAAAAAACCAGCCGGTTCTCGTAAGGATGGCAAAGGCAATAGTTCGTCAGATTCTCATTTTGAATTGGATTCACGTCTTCTATCAGCTCTATTAATGGGAGTCAATAGAGCATTCCCATATGTTTCGAAGAATGAGGCTGATGACGTTGTTGAGGCCCAAACACCAACGCTTTTCCATTTGGTTCATTCTACTAACTTCAATGTAGGAGTTCAAGCACTGATGCTTCTTCATCATATCTCATCTAAGAATCAAATTGTCAGTGATAGGTTTTACCGAGCCTTGTACTCAAAACTACTCCTTCCAGCTGCCATGAATACTTCCAAGGCTGAAACATTTATTGGACTTCTTCTGAGAGCAATGAAATCTGATGTCAATGTGAAGCGTACAGCTGCTTTTGCAAAACGTCTACTGCAGGTTGCCCTTCAACAGCCGCCTCAATATGCATGTGGATGCCTCTTTCTTCTCTCTGAAGTTCTAAAAGCACGGCCCCCCTTGTGGAACATGGTGCTCCAAAATGAGTCAGTTGATGATGATCTTGAGCATTTTGAAGATGTGATAGAAGAAACCGATAACGAACCCAGCCCTGTCCTGGAGAAACAAGAAGTTGAACTTGTTCATAACAGTGATGAAAAAAGTGATACCGTCAATTCCAATCATGATTCTTCAGAAGATGATATTGACTCTTCCGCCTCATATTCTGAAGATGAAGCTTCCGATGAAGCAGATGAGTTTCATTTTAGAAATGATTCAAAGGACTCCAAGACGGTGCCTGATAGTAGCGTGCAGCAACAACAAGTAGTATCCTCTGAGAAGACTTCACTACCTGGAGGCTATGATCCACGACACAGAGAACCCTCTTACTGCAATGCAGATCGTGTAAGCTGGTGGGAGTTGACAGTACTTGCTTCACATGTGCACCCTTCAGTTTCTACCATGGCAAAGACACTTCTCTCTGGGGCGAATATTGTCTATAATGGAAACCCACTGAATGACCTATCACTTACTGCTTTTCTGGACAAGTTTATGGAGAAAAAACCAAAGGCAAGCACATGGCATGGTGGTTCGCAAATTGAACCTGCGAAAAAGCTTGACATGACCAACCGATTCATAGGACCAGAAATCCTCTCATTGGCTGAAGAAGATGTACCTGCAGAAGATCTCGTCTTTCACAAGTTCTACATGAATAAAATGAATACTTCAAAGAAACCAAAGAAGAAGAAGAAGAAGGCAACAACAGAAGATGAAGATGCCGCGGAGTTGTTTGATGTGGATGGTGGTGGTGGTGGTGATGATGAGAGTGATAATGAAGAGATTGACAATATGCTGGATTCTGCTGGTGTTGCCATGGATGCAGATGGCGACTATGATTATGATGATCTAGACCAAGTAGCCAATGACGACGATGAAGACTTGGTTGGTAATGTTAGTGATGTCAGTGATGCTGATCTTGACCTGCCCTCAGATATTGCAGAGGGTGAAGAATTTGATACCACTGCAAACAGTGATGAAAGTGATGATGGCGATGATGCTATTGATATAGGAGATGTTGATGAGGACGAGGTTGAGGATGAGGATGAGGATGTCCATATTGAGGGTGTCCAGGGGAAAAGTAAACGGAAGCGTGGGAAGGCTGCAGCATCCCCATTTGCGAGTCTGGAAGAATATGAGCATTTGTTTAACGAGGACGCCCCTGCTGAGAAGGAATCTAAAAGCAAGAAGAAATCCAAGCCCCGAAAGAAGAGAAAGTCGTCTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBF

Protein Analysis

1025

Amino Acids

113.8

Weight (kDa)

5.11

Isoelectric Point (pI)

42.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBF PF03914 509 - 752 1.3e-43 CBF/Mak21 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1265
Acc36I ACCTGC 5 cut(s) 1265, 1720, 2401, 2473, 2778
AccB1I GGYRCC 1 cut(s) 2083
AccI GTMKAC 1 cut(s) 1723
AccII CGCG 1 cut(s) 2570
AclI AACGTT 1 cut(s) 874
AclWI GGATC 3 cut(s) 626, 1013, 2147
AcoI YGGCCR 2 cut(s) 471, 1130
AcsI RAATTY 3 cut(s) 208, 1182, 2798
AcuI CTGAAG 8 cut(s) 105, 414, 1023, 1806, 1965, 2037, 2223, 2472
AcyI GRCGYC 1 cut(s) 3003
AfaI GTAC 8 cut(s) 383, 512, 1157, 1260, 1601, 1702, 2217, 2463
AflII CTTAAG 1 cut(s) 767
AflIII ACRYGT 1 cut(s) 2227
AjiI CACGTC 1 cut(s) 1391
AjnI CCWGG 3 cut(s) 1905, 2140, 2916
AjuI GAANNNNNNNTTGG 4 cut(s) 1638, 1670, 2715, 2747
Alw21I GWGCWC 3 cut(s) 51, 1827, 2235
Alw44I GTGCAC 1 cut(s) 2231
AlwI GGATC 3 cut(s) 626, 1013, 2147
AlwNI CAGNNNCTG 2 cut(s) 587, 1046
AoxI GGCC 8 cut(s) 88, 170, 257, 471, 785, 1130, 1470, 1802
ApaLI GTGCAC 1 cut(s) 2231
ApeKI GCWGC 6 cut(s) 346, 1622, 1706, 2101, 2948, 2951
ApoI RAATTY 3 cut(s) 208, 1182, 2798
AseI ATTAAT 1 cut(s) 1409
Asp700I GAANNNNTTC 2 cut(s) 1929, 2062
AspS9I GGNCC 6 cut(s) 258, 1208, 1290, 1471, 1803, 2429
AsuHPI GGTGA 6 cut(s) 292, 476, 1111, 1295, 2615, 2804
AsuII TTCGAA 3 cut(s) 269, 533, 1442
AvaII GGWCC 3 cut(s) 1208, 1290, 2429
BaeGI GKGCMC 1 cut(s) 2235
BalI TGGCCA 1 cut(s) 473
BanI GGYRCC 1 cut(s) 2083
BarI GAAGNNNNNNTAC 2 cut(s) 2445, 2477
BbsI GAAGAC 4 cut(s) 947, 1385, 2135, 2730
Bbv12I GWGCWC 3 cut(s) 51, 1827, 2235
BbvI GCAGC 6 cut(s) 333, 1609, 1693, 2113, 2935, 2963
BccI CCATC 8 cut(s) 496, 809, 1086, 1199, 1337, 2582, 2666, 2828
BceAI ACGGC 3 cut(s) 334, 531, 1817
BciT130I CCWGG 3 cut(s) 1907, 2142, 2918
BciVI GTATCC 1 cut(s) 2128
BfaI CTAG 2 cut(s) 1001, 2696
BfmI CTRYAG 3 cut(s) 1727, 2466, 2949
BfrI CTTAAG 1 cut(s) 767
BfuAI ACCTGC 5 cut(s) 1265, 1720, 2401, 2473, 2778
BfuI GTATCC 1 cut(s) 2128
BglII AGATCT 1 cut(s) 2473
BmcAI AGTACT 1 cut(s) 2217
Bme1390I CCNGG 3 cut(s) 1907, 2142, 2918
Bme18I GGWCC 3 cut(s) 1208, 1290, 2429
BmgBI CACGTC 1 cut(s) 1391
BmgT120I GGNCC 6 cut(s) 258, 1208, 1290, 1471, 1803, 2429
BmiI GGNNCC 2 cut(s) 1805, 2085
BmrFI CCNGG 3 cut(s) 1907, 2142, 2918
BmrI ACTGGG 1 cut(s) 1022
BmuI ACTGGG 1 cut(s) 1022
BpiI GAAGAC 4 cut(s) 947, 1385, 2135, 2730
BplI GAGNNNNNCTC 2 cut(s) 1100, 1132
BpmI CTGGAG 2 cut(s) 1928, 2163
Bpu14I TTCGAA 3 cut(s) 269, 533, 1442
BpuEI CTTGAG 3 cut(s) 38, 911, 1874
BsaBI GATNNNNATC 2 cut(s) 1848, 2760
BsaHI GRCGYC 1 cut(s) 3003
BsaJI CCNNGG 7 cut(s) 85, 435, 1638, 2250, 2568, 2661, 2917
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bse118I RCCGGY 1 cut(s) 1328
Bse1I ACTGG 1 cut(s) 1017
Bse3DI GCAATG 3 cut(s) 636, 1680, 2188
Bse8I GATNNNNATC 2 cut(s) 1848, 2760
BseBI CCWGG 3 cut(s) 1907, 2142, 2918
BseDI CCNNGG 7 cut(s) 85, 435, 1638, 2250, 2568, 2661, 2917
BseJI GATNNNNATC 2 cut(s) 1848, 2760
BseMI GCAATG 3 cut(s) 636, 1680, 2188
BseMII CTCAG 6 cut(s) 795, 1260, 1658, 2115, 2790, 3003
BseNI ACTGG 1 cut(s) 1017
BseSI GKGCMC 1 cut(s) 2235
BseX3I CGGCCG 1 cut(s) 1130
BseXI GCAGC 6 cut(s) 333, 1609, 1693, 2113, 2935, 2963
BseYI CCCAGC 1 cut(s) 1895
BsgI GTGCAG 1 cut(s) 2120
Bsh1236I CGCG 1 cut(s) 2570
Bsh1285I CGRYCG 2 cut(s) 760, 1133
BshFI GGCC 8 cut(s) 90, 172, 259, 473, 787, 1132, 1472, 1804
BshNI GGYRCC 1 cut(s) 2083
BsiEI CGRYCG 2 cut(s) 760, 1133
BsiHKAI GWGCWC 3 cut(s) 51, 1827, 2235
BsiSI CCGG 1 cut(s) 1329
BslFI GGGAC 1 cut(s) 598
BsmFI GGGAC 1 cut(s) 598
BsmI GAATGC 2 cut(s) 857, 1427
BsnI GGCC 8 cut(s) 90, 172, 259, 473, 787, 1132, 1472, 1804
Bsp119I TTCGAA 3 cut(s) 269, 533, 1442
Bsp1286I GDGCHC 3 cut(s) 51, 1827, 2235
Bsp19I CCATGG 2 cut(s) 2250, 2661
BspANI GGCC 8 cut(s) 90, 172, 259, 473, 787, 1132, 1472, 1804
BspCNI CTCAG 6 cut(s) 796, 1261, 1659, 2116, 2789, 3004
BspFNI CGCG 1 cut(s) 2570
BspHI TCATGA 1 cut(s) 1972
BspLI GGNNCC 2 cut(s) 1805, 2085
BspMAI CTGCAG 3 cut(s) 1731, 2470, 2953
BspMI ACCTGC 5 cut(s) 1265, 1720, 2401, 2473, 2778
BspPI GGATC 3 cut(s) 626, 1013, 2147
BspT104I TTCGAA 3 cut(s) 269, 533, 1442
BspT107I GGYRCC 1 cut(s) 2083
BspTI CTTAAG 1 cut(s) 767
BsrDI GCAATG 3 cut(s) 636, 1680, 2188
BsrFI RCCGGY 1 cut(s) 1328
BsrI ACTGG 1 cut(s) 1017
BssAI RCCGGY 1 cut(s) 1328
BssECI CCNNGG 7 cut(s) 85, 435, 1638, 2250, 2568, 2661, 2917
BssNI GRCGYC 1 cut(s) 3003
BssT1I CCWWGG 3 cut(s) 1638, 2250, 2661
Bst2UI CCWGG 3 cut(s) 1907, 2142, 2918
Bst4CI ACNGT 8 cut(s) 311, 510, 993, 1940, 1960, 2083, 2215, 2819
Bst6I CTCTTC 5 cut(s) 536, 831, 2005, 2619, 3050
BstACI GRCGYC 1 cut(s) 3003
BstAFI CTTAAG 1 cut(s) 767
BstBI TTCGAA 3 cut(s) 269, 533, 1442
BstC8I GCNNGC 2 cut(s) 2099, 2362
BstDEI CTNAG 9 cut(s) 21, 804, 1190, 1269, 1560, 1667, 2124, 2776, 3012
BstDSI CCRYGG 3 cut(s) 2250, 2568, 2661
BstFNI CGCG 1 cut(s) 2570
BstMCI CGRYCG 2 cut(s) 760, 1133
BstMWI GCNNNNNNNGC 5 cut(s) 74, 1043, 1712, 2657, 2666
BstNI CCWGG 3 cut(s) 1907, 2142, 2918
BstNSI RCATGY 2 cut(s) 1764, 2231
BstSCI CCNGG 3 cut(s) 1905, 2140, 2916
BstSFI CTRYAG 3 cut(s) 1727, 2466, 2949
BstSLI GKGCMC 1 cut(s) 2235
BstUI CGCG 1 cut(s) 2570
BstV1I GCAGC 6 cut(s) 333, 1609, 1693, 2113, 2935, 2963
BstV2I GAAGAC 4 cut(s) 947, 1385, 2135, 2730
BstX2I RGATCY 2 cut(s) 1018, 2473
BstYI RGATCY 2 cut(s) 1018, 2473
BstZI CGGCCG 1 cut(s) 1130
BsuI GTATCC 1 cut(s) 2128
BsuRI GGCC 8 cut(s) 90, 172, 259, 473, 787, 1132, 1472, 1804
BtgI CCRYGG 3 cut(s) 2250, 2568, 2661
BtgZI GCGATG 1 cut(s) 2853
BtrI CACGTC 1 cut(s) 1391
BtsI GCAGTG 1 cut(s) 2808
BtsIMutI CAGTG 8 cut(s) 316, 1532, 1582, 1945, 2300, 2758, 2808, 2824
BveI ACCTGC 5 cut(s) 1265, 1720, 2401, 2473, 2778
Cac8I GCNNGC 2 cut(s) 2099, 2362
CaiI CAGNNNCTG 2 cut(s) 587, 1046
CciI TCATGA 1 cut(s) 1972
Cfr10I RCCGGY 1 cut(s) 1328
Cfr13I GGNCC 6 cut(s) 258, 1208, 1290, 1471, 1803, 2429
Cfr42I CCGCGG 1 cut(s) 2571
CseI GACGC 1 cut(s) 3011
Csp6I GTAC 8 cut(s) 382, 511, 1156, 1259, 1600, 1701, 2216, 2462
CspCI CAANNNNNGTGG 2 cut(s) 352, 387
CviQI GTAC 8 cut(s) 382, 511, 1156, 1259, 1600, 1701, 2216, 2462
DdeI CTNAG 9 cut(s) 21, 804, 1190, 1269, 1560, 1667, 2124, 2776, 3012
DraI TTTAAA 2 cut(s) 792, 1140
EaeI YGGCCR 2 cut(s) 471, 1130
EagI CGGCCG 1 cut(s) 1130
Eam1104I CTCTTC 5 cut(s) 536, 831, 2005, 2619, 3050
EarI CTCTTC 5 cut(s) 536, 831, 2005, 2619, 3050
EciI GGCGGA 3 cut(s) 20, 533, 1993
EclXI CGGCCG 1 cut(s) 1130
Eco130I CCWWGG 3 cut(s) 1638, 2250, 2661
Eco147I AGGCCT 1 cut(s) 172
Eco47I GGWCC 3 cut(s) 1208, 1290, 2429
Eco52I CGGCCG 1 cut(s) 1130
Eco57I CTGAAG 8 cut(s) 105, 414, 1023, 1806, 1965, 2037, 2223, 2472
EcoRI GAATTC 1 cut(s) 208
EcoRII CCWGG 3 cut(s) 1905, 2140, 2916
EcoT14I CCWWGG 3 cut(s) 1638, 2250, 2661
EcoT22I ATGCAT 2 cut(s) 724, 1762
ErhI CCWWGG 3 cut(s) 1638, 2250, 2661
FalI AAGNNNNNCTT 4 cut(s) 761, 793, 1911, 1943
FaqI GGGAC 1 cut(s) 598
FauI CCCGC 1 cut(s) 703
FauNDI CATATG 1 cut(s) 1435
FblI GTMKAC 1 cut(s) 1723
FspBI CTAG 2 cut(s) 1001, 2696
GsaI CCCAGC 1 cut(s) 1899
GsuI CTGGAG 2 cut(s) 1928, 2163
HaeIII GGCC 8 cut(s) 90, 172, 259, 473, 787, 1132, 1472, 1804
HapII CCGG 1 cut(s) 1329
HgaI GACGC 1 cut(s) 3011
Hin1I GRCGYC 1 cut(s) 3003
HincII GTYRAC 2 cut(s) 1168, 2211
HindII GTYRAC 2 cut(s) 1168, 2211
HindIII AAGCTT 4 cut(s) 485, 764, 2025, 2402
HpaI GTTAAC 1 cut(s) 1168
HpaII CCGG 1 cut(s) 1329
HphI GGTGA 6 cut(s) 292, 476, 1111, 1295, 2615, 2804
Hpy166II GTNNAC 7 cut(s) 513, 1114, 1168, 1724, 2211, 2233, 2930
Hpy8I GTNNAC 7 cut(s) 513, 1114, 1168, 1724, 2211, 2233, 2930
Hpy99I CGWCG 1 cut(s) 2720
HpyAV CCTTC 9 cut(s) 294, 398, 1084, 1625, 1748, 2247, 2536, 2938, 3010
HpyCH4III ACNGT 8 cut(s) 311, 510, 993, 1940, 1960, 2083, 2215, 2819
HpyCH4IV ACGT 4 cut(s) 874, 1390, 1461, 1720
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 1043, 1712, 2657, 2666
HpyF3I CTNAG 9 cut(s) 21, 804, 1190, 1269, 1560, 1667, 2124, 2776, 3012
HpySE526I ACGT 4 cut(s) 874, 1390, 1461, 1720
Hsp92I GRCGYC 1 cut(s) 3003
KspAI GTTAAC 1 cut(s) 1168
KspI CCGCGG 1 cut(s) 2571
LmnI GCTCC 2 cut(s) 973, 1830
Lsp1109I GCAGC 6 cut(s) 333, 1609, 1693, 2113, 2935, 2963
MaeI CTAG 2 cut(s) 1001, 2696
MaeII ACGT 4 cut(s) 874, 1390, 1461, 1720
MaeIII GTNAC 4 cut(s) 298, 446, 912, 1073
MflI RGATCY 2 cut(s) 1018, 2473
MhlI GDGCHC 3 cut(s) 51, 1827, 2235
MlsI TGGCCA 1 cut(s) 473
MluCI AATT 9 cut(s) 208, 398, 643, 1182, 1379, 1569, 1963, 2385, 2798
MluNI TGGCCA 1 cut(s) 473
MlyI GAGTC 7 cut(s) 815, 1109, 1425, 1844, 1991, 2066, 2977
Mox20I TGGCCA 1 cut(s) 473
Mph1103I ATGCAT 2 cut(s) 724, 1762
MroXI GAANNNNTTC 2 cut(s) 1929, 2062
MscI TGGCCA 1 cut(s) 473
MseI TTAA 9 cut(s) 555, 768, 791, 1005, 1139, 1167, 1409, 2994, 3073
MslI CAYNNNNRTG 3 cut(s) 374, 1765, 1938
Msp20I TGGCCA 1 cut(s) 473
MspA1I CMGCKG 4 cut(s) 784, 1622, 1706, 2570
MspCI CTTAAG 1 cut(s) 767
MspI CCGG 1 cut(s) 1329
MspR9I CCNGG 3 cut(s) 1907, 2142, 2918
Mva1269I GAATGC 2 cut(s) 857, 1427
MvaI CCWGG 3 cut(s) 1907, 2142, 2918
MvnI CGCG 1 cut(s) 2570
MwoI GCNNNNNNNGC 5 cut(s) 74, 1043, 1712, 2657, 2666
NcoI CCATGG 2 cut(s) 2250, 2661
NdeI CATATG 1 cut(s) 1435
NlaIV GGNNCC 2 cut(s) 1805, 2085
NmeAIII GCCGAG 2 cut(s) 66, 460
NmuCI GTSAC 3 cut(s) 298, 446, 1073
NsiI ATGCAT 2 cut(s) 724, 1762
NspI RCATGY 2 cut(s) 1764, 2231
NspV TTCGAA 3 cut(s) 269, 533, 1442
PagI TCATGA 1 cut(s) 1972
PaqCI CACCTGC 1 cut(s) 1265
PceI AGGCCT 1 cut(s) 172
PciI ACATGT 1 cut(s) 2227
PctI GAATGC 2 cut(s) 857, 1427
PdmI GAANNNNTTC 2 cut(s) 1929, 2062
PfoI TCCNGGA 1 cut(s) 1905
Ple19I CGATCG 1 cut(s) 760
PleI GAGTC 7 cut(s) 814, 1109, 1424, 1843, 1991, 2066, 2976
PpsI GAGTC 7 cut(s) 814, 1109, 1424, 1843, 1991, 2066, 2976
PscI ACATGT 1 cut(s) 2227
PshBI ATTAAT 1 cut(s) 1409
Psp1406I AACGTT 1 cut(s) 874
Psp6I CCWGG 3 cut(s) 1905, 2140, 2916
PspFI CCCAGC 1 cut(s) 1895
PspGI CCWGG 3 cut(s) 1905, 2140, 2916
PspN4I GGNNCC 2 cut(s) 1805, 2085
PspPI GGNCC 6 cut(s) 258, 1208, 1290, 1471, 1803, 2429
PstI CTGCAG 3 cut(s) 1731, 2470, 2953
PstNI CAGNNNCTG 2 cut(s) 587, 1046
PsuI RGATCY 2 cut(s) 1018, 2473
PvuI CGATCG 1 cut(s) 760
PvuII CAGCTG 2 cut(s) 1622, 1706
RsaI GTAC 8 cut(s) 383, 512, 1157, 1260, 1601, 1702, 2217, 2463
RsaNI GTAC 8 cut(s) 382, 511, 1156, 1259, 1600, 1701, 2216, 2462
RseI CAYNNNNRTG 3 cut(s) 374, 1765, 1938
SacII CCGCGG 1 cut(s) 2571
SaqAI TTAA 9 cut(s) 555, 768, 791, 1005, 1139, 1167, 1409, 2994, 3073
Sau96I GGNCC 6 cut(s) 258, 1208, 1290, 1471, 1803, 2429
ScaI AGTACT 1 cut(s) 2217
SchI GAGTC 7 cut(s) 815, 1109, 1425, 1844, 1991, 2066, 2977
ScrFI CCNGG 3 cut(s) 1907, 2142, 2918
SduI GDGCHC 3 cut(s) 51, 1827, 2235
SfcI CTRYAG 3 cut(s) 1727, 2466, 2949
Sfr303I CCGCGG 1 cut(s) 2571
SfuI TTCGAA 3 cut(s) 269, 533, 1442
SgrBI CCGCGG 1 cut(s) 2571
SinI GGWCC 3 cut(s) 1208, 1290, 2429
SmiMI CAYNNNNRTG 3 cut(s) 374, 1765, 1938
SmlI CTYRAG 4 cut(s) 53, 767, 890, 1853
SmoI CTYRAG 4 cut(s) 53, 767, 890, 1853
Sse9I AATT 9 cut(s) 208, 398, 643, 1182, 1379, 1569, 1963, 2385, 2798
SseBI AGGCCT 1 cut(s) 172
SspI AATATT 1 cut(s) 2281
SspMI CTAG 2 cut(s) 1001, 2696
StuI AGGCCT 1 cut(s) 172
StyD4I CCNGG 3 cut(s) 1905, 2140, 2916
StyI CCWWGG 3 cut(s) 1638, 2250, 2661
TaaI ACNGT 8 cut(s) 311, 510, 993, 1940, 1960, 2083, 2215, 2819
TaiI ACGT 4 cut(s) 877, 1393, 1464, 1723
TaqI TCGA 5 cut(s) 45, 138, 269, 533, 1442
TaqII GACCGA 1 cut(s) 1307
TasI AATT 9 cut(s) 208, 398, 643, 1182, 1379, 1569, 1963, 2385, 2798
TatI WGTACW 3 cut(s) 510, 1599, 2215
TauI GCSGC 4 cut(s) 787, 1135, 1750, 2570
Tru1I TTAA 9 cut(s) 555, 768, 791, 1005, 1139, 1167, 1409, 2994, 3073
Tru9I TTAA 9 cut(s) 555, 768, 791, 1005, 1139, 1167, 1409, 2994, 3073
TscAI CASTG 8 cut(s) 316, 1539, 1582, 1945, 2307, 2758, 2815, 2824
TseFI GTSAC 3 cut(s) 298, 446, 1073
TseI GCWGC 6 cut(s) 346, 1622, 1706, 2101, 2948, 2951
Tsp45I GTSAC 3 cut(s) 298, 446, 1073
TspGWI ACGGA 1 cut(s) 2947
TspRI CASTG 8 cut(s) 316, 1539, 1582, 1945, 2307, 2758, 2815, 2824
Vha464I CTTAAG 1 cut(s) 767
VneI GTGCAC 1 cut(s) 2231
VpaK11BI GGWCC 3 cut(s) 1208, 1290, 2429
VspI ATTAAT 1 cut(s) 1409
XapI RAATTY 3 cut(s) 208, 1182, 2798
XbaI TCTAGA 1 cut(s) 2695
XceI RCATGY 2 cut(s) 1764, 2231
XcmI CCANNNNNNNNNTGG 1 cut(s) 1903
XmiI GTMKAC 1 cut(s) 1723
XmnI GAANNNNTTC 2 cut(s) 1929, 2062
XspI CTAG 2 cut(s) 1001, 2696
ZrmI AGTACT 1 cut(s) 2217
Zsp2I ATGCAT 2 cut(s) 724, 1762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.