Rw2G037220

CCAAT enhancer-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0008077
Physical Location & Seq
Reverse (-)
61333899 .. 61340620
6722 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G037220.1

Sequence Viewer

Length: 3003 bp
ATGGCGGACAGAAAGAAATCGAAGAAACCCACAAACAACAACATCGAGCACCTCAAGACTGACATAGCCTCCTTCGCTTCCTCCCTCGGCCTCTCTACCTCCCTCCCTGCCTCTGATTCTTCAGGCTTCAACGATGTCGATTTCCGCAACCCCAAAAAACCCCAACAGAGGCCTAAACCCTCAAAACCCCAGAATTCCAAACCCCAAAATCGAAACACCCAGAACTTCAAACCCAATGAAAGGCCCAATCTTTCGAAACCCCCTTTTCCTTCAGTCCCTGATGTCACCAGCAACAGTGAAAAAGCAAAGACCTTTGAGAATCTTCCGAAGCTGCCGTTGATTTCAGCCACCAACATTGGAGTGTGGTACGAAGAAGCTGAAGAATTGGAAGGCAAAGTGGTCGGGAAGATGAAGAAAGCCGAGGCAAGGAGTGACAAGGAGTGGAGTGGTGAGGTGGCCAAGAAGCGAAAGCTTGGAGAGAGGTTGATGGCACAGTACACGGCGGATTACGAGGCTTCGAAAGGGAAGAGTGGGGATATCAAGCTGTTGCTGACCACACAGAGGTCAGGGACTGCTTCTGATAAGATTTCGGCGTTTTCGGTGTTGGTTGGGGATGATCCCATTGCCAATTTGAGGTCTTTGGATGCACTTTTAGGAATGGTAGCATCAAAAGTAGGGAAGCGATACGCATTTGCAGGTTTTGATGCATTGAGGGAGTTGTTTCTTACAAGTTTATTACCCGATCGTAAGCTTAAGAGCCTCTTACAGCGGCCTTTAAATGATCTTCCTGAGACAAAAGATGGTTATTCTCTTCTGCTTCTGTGGTATTGGGAGGAATGCTTGAAACAAAGGTATGAACGCTTTGTTATTGCTCTTGAGGAAGCATCAAGAGATATGTTACCTGAACTAAAAAACAAGGCATTGAAGACTATATATGTATTACTAAAGAGTAAATCGGAGCAAGAGCGAAGATTACTGTCTGCCCTAGTTAATAAACTGGGAGATCCTAAAAATAAGGGTGCTTCAGATGCTGATTTTCACTTATCAAACCTTTTGCGTGACCATCCAAACATGAAGGCTGTGGTGATTGATGAGGTGGACTCTTTTCTCTTTCGGCCGCATTTAAACATACAAGCAAAGTACCATGCGGTTAACTTTTTGAGCCAAATTCAACTAAGAAATAAAGGAGATGGACCAAAGGTGGCAAAAAGTTTGGTAGATGTATATTTTGCACTTTTCAAGGTACTGATTTCTGAGGCAGGTGGAGGTGAAAAGACCGAAAAGAACGAGAAAGTAGGGGGTAAAAAACCAGCCGGTTCTCGTAAGGATGGCAAAGGCAATAGTTCATCAGATTCTCATTTTGAATTGGATTCACGTCTTCTATCAGCTCTATTAATGGGAGTCAATAGAGCATTCCCATATGTTTCAAAGAATGAGGCTGATGATGTTGTTGAGGCCCAAACACCAACGCTTTTCCATTTGGTTCATTCTACTAACTTCAATGTAGGAGTTCAAGCACTGATGCTTCTTCATCATATCTCATCTAAGAATCAAATTGTCAGTGATAGGTTTTACCGAGCCTTGTACTCAAAACTACTCCTTCCAGCTGCCATGAATACTTCCAAGGCTGAAACATTTATTGGACTTCTTCTGAGAGCAATGAAATCTGATGTCAATGTGAAGCGTACAGCTGCTTTTGCAAAACGTCTACTGCAGGTCGCCCTTCAACAGCCGCCTCAATATGCATGTGGATGCCTCTTTCTTCTCTCTGAAGTTCTAAAAGCACGGCCCCCCTTGTGGAACATGGTGCTCCAAAATGAGTCAGTTGATGATGACCTTGAGCATTTTGAAGATGTGATAGAAGAAACCGATAACGAACCTAGCCCTGTCCTGGAGAAACAAGAAGTTGAACTTGTTCATAACAGTGATGAAAAAAGTGATACCGTCAATTCCGATCATGATTCTTCAGAAGATGATATTGACTCTTCCGCCTCATATTCTGAAGATGAAGCTTCCGATGAAGCAGATGATAGCGTGCAGCAACCACAAGTAGTATCCTCTGAGAAGACTTCACTACCTGGAGGCTATGATCCACGACACAGAGAGCCCTCTTACTGCAATGCAGATCGTGTAAGCTGGTGGGAGTTGACAGTACTTGCTTCACATGTGCACCCTTCAGTTTCTACCATGGCAAAGACACTTCTCTCTGGGGCGAATATTGTCTATAATGGAAACCCACTGAATGACCTATCACTTACTGCTTTTCTGGACAAGTTTATGGAGAAAAAACCAAAGGCAAGCACATGGCATGGTGGTTCGCAAATTGAACCTGTGAAAAAGCTTGACATGACCAACCGATTCATAGGACCAGAAATCCTCTCATTGGCTGAAGAAGATGTACCTGCAGAAGATCTCGTCTTTCACAAGTTCTACATGAATAAAATGAATACTTCGAAGAAACCAAAGAAGAAGAAGAAGAAGAAGGCAACAACAGAAGATGAAGATGCTGCGGAGTTGTTTGATGTGGATGGTGGTGGTGATGATGAGAGTGATAATGAAGAGATTGACAATATGCTGGATTCTGCTGGTATTGCCATGGATGCAGATGGCGACTATGATTATGATGATCTAGACCAAGTAGCCAATGACGACGATGAAGACTTGGTTGGTAATGTTAGTGATGTCAGTGATGCTGATCTTGACCTGCCCTCAGATATTGCAGAGGGTGAAGATTTTGATACCACTGCAGTTAGTGATGAAAGTGATGATGGCGATGATGCTATTGATATAGGAGATGTTGATGACGACGAGGTTGAGGACGAGGATGTCCATATTGAGAGTGTCCAGGGGAAAAGTAAACGGAAGCGTGGGAAGGCTGCAGCATCCCCATTTGCTAGTCTGGAAGAATATGAGCATTTGTTTAACGAGGACGCCCCTGCTGAGAAGGAATCTAAAAGCAAGAAGAAATCCAAGCCCCGAAAGAAGAGAAAGTCGTCTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBF

Protein Analysis

1000

Amino Acids

111.12

Weight (kDa)

5.12

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBF PF03914 504 - 731 4.5e-45 CBF/Mak21 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1250
AasI GACNNNNNNGTC 1 cut(s) 2825
Acc36I ACCTGC 5 cut(s) 686, 1250, 1705, 2410, 2712
AccI GTMKAC 1 cut(s) 1708
AciI CCGC 9 cut(s) 5, 145, 503, 769, 1118, 1148, 1733, 1989, 2510
AclWI GGATC 3 cut(s) 611, 998, 2084
AcoI YGGCCR 2 cut(s) 456, 1115
AcsI RAATTY 2 cut(s) 193, 1167
AcuI CTGAAG 9 cut(s) 105, 255, 399, 1008, 1791, 1950, 2022, 2160, 2409
AcyI GRCGYC 1 cut(s) 2931
AfaI GTAC 8 cut(s) 368, 497, 1142, 1245, 1586, 1687, 2154, 2400
AfiI CCNNNNNNNGG 8 cut(s) 168, 240, 426, 561, 633, 1797, 1891, 2383
AflII CTTAAG 1 cut(s) 752
AflIII ACRYGT 1 cut(s) 2164
AjiI CACGTC 1 cut(s) 1376
AjnI CCWGG 3 cut(s) 1890, 2077, 2844
AjuI GAANNNNNNNTTGG 4 cut(s) 1623, 1655, 2649, 2681
Alw21I GWGCWC 3 cut(s) 51, 1812, 2172
Alw26I GTCTC 1 cut(s) 785
Alw44I GTGCAC 1 cut(s) 2168
AlwI GGATC 3 cut(s) 611, 998, 2084
AlwNI CAGNNNCTG 3 cut(s) 278, 572, 1031
AoxI GGCC 8 cut(s) 88, 170, 242, 456, 770, 1115, 1455, 1787
ApaLI GTGCAC 1 cut(s) 2168
ApeKI GCWGC 7 cut(s) 331, 1607, 1691, 2038, 2507, 2876, 2879
ApoI RAATTY 2 cut(s) 193, 1167
AseI ATTAAT 1 cut(s) 1394
Asp700I GAANNNNTTC 1 cut(s) 1914
AspS9I GGNCC 5 cut(s) 243, 1193, 1456, 1788, 2366
AsuHPI GGTGA 6 cut(s) 277, 461, 1096, 1280, 2549, 2738
AsuII TTCGAA 3 cut(s) 254, 518, 2453
AvaII GGWCC 2 cut(s) 1193, 2366
BaeGI GKGCMC 1 cut(s) 2172
BalI TGGCCA 1 cut(s) 458
BanII GRGCYC 1 cut(s) 2109
BarI GAAGNNNNNNTAC 2 cut(s) 2382, 2414
BbsI GAAGAC 4 cut(s) 932, 1370, 2072, 2664
Bbv12I GWGCWC 3 cut(s) 51, 1812, 2172
BbvI GCAGC 7 cut(s) 318, 1594, 1678, 2050, 2494, 2863, 2891
BccI CCATC 8 cut(s) 481, 794, 1071, 1184, 1322, 2522, 2600, 2762
BceAI ACGGC 3 cut(s) 319, 516, 1802
BcgI CGANNNNNNTGC 2 cut(s) 382, 416
BciT130I CCWGG 3 cut(s) 1892, 2079, 2846
BciVI GTATCC 1 cut(s) 2065
BcoDI GTCTC 1 cut(s) 785
BfaI CTAG 4 cut(s) 986, 1881, 2630, 2895
BfmI CTRYAG 4 cut(s) 1712, 2403, 2745, 2877
BfrI CTTAAG 1 cut(s) 752
BfuAI ACCTGC 5 cut(s) 686, 1250, 1705, 2410, 2712
BfuI GTATCC 1 cut(s) 2065
BglII AGATCT 1 cut(s) 2410
BmcAI AGTACT 1 cut(s) 2154
Bme1390I CCNGG 3 cut(s) 1892, 2079, 2846
Bme18I GGWCC 2 cut(s) 1193, 2366
BmgBI CACGTC 1 cut(s) 1376
BmgT120I GGNCC 5 cut(s) 243, 1193, 1456, 1788, 2366
BmiI GGNNCC 1 cut(s) 1790
BmrFI CCNGG 3 cut(s) 1892, 2079, 2846
BmrI ACTGGG 1 cut(s) 1007
BmuI ACTGGG 1 cut(s) 1007
BpiI GAAGAC 4 cut(s) 932, 1370, 2072, 2664
BplI GAGNNNNNCTC 2 cut(s) 1085, 1117
BpmI CTGGAG 2 cut(s) 1913, 2100
Bpu14I TTCGAA 3 cut(s) 254, 518, 2453
BpuEI CTTGAG 3 cut(s) 38, 896, 1859
BsaBI GATNNNNATC 1 cut(s) 2694
BsaHI GRCGYC 1 cut(s) 2931
BsaJI CCNNGG 6 cut(s) 85, 420, 1623, 2187, 2595, 2845
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bsc4I CCNNNNNNNGG 8 cut(s) 168, 240, 426, 561, 633, 1797, 1891, 2383
Bse118I RCCGGY 1 cut(s) 1313
Bse1I ACTGG 1 cut(s) 1002
Bse3DI GCAATG 3 cut(s) 621, 1665, 2125
Bse8I GATNNNNATC 1 cut(s) 2694
BseBI CCWGG 3 cut(s) 1892, 2079, 2846
BseDI CCNNGG 6 cut(s) 85, 420, 1623, 2187, 2595, 2845
BseGI GGATG 9 cut(s) 619, 649, 1063, 1333, 1757, 2533, 2605, 2830, 2882
BseJI GATNNNNATC 1 cut(s) 2694
BseLI CCNNNNNNNGG 8 cut(s) 168, 240, 426, 561, 633, 1797, 1891, 2383
BseMI GCAATG 3 cut(s) 621, 1665, 2125
BseMII CTCAG 6 cut(s) 780, 1245, 1643, 2052, 2724, 2931
BseNI ACTGG 1 cut(s) 1002
BseSI GKGCMC 1 cut(s) 2172
BseX3I CGGCCG 1 cut(s) 1115
BseXI GCAGC 7 cut(s) 318, 1594, 1678, 2050, 2494, 2863, 2891
BsgI GTGCAG 1 cut(s) 2057
Bsh1285I CGRYCG 2 cut(s) 745, 1118
BshFI GGCC 8 cut(s) 90, 172, 244, 458, 772, 1117, 1457, 1789
BsiEI CGRYCG 2 cut(s) 745, 1118
BsiHKAI GWGCWC 3 cut(s) 51, 1812, 2172
BsiSI CCGG 1 cut(s) 1314
BslFI GGGAC 2 cut(s) 260, 583
BslI CCNNNNNNNGG 8 cut(s) 168, 240, 426, 561, 633, 1797, 1891, 2383
BsmAI GTCTC 1 cut(s) 785
BsmFI GGGAC 2 cut(s) 260, 583
BsmI GAATGC 2 cut(s) 842, 1412
BsnI GGCC 8 cut(s) 90, 172, 244, 458, 772, 1117, 1457, 1789
Bsp119I TTCGAA 3 cut(s) 254, 518, 2453
Bsp1286I GDGCHC 4 cut(s) 51, 1812, 2109, 2172
Bsp19I CCATGG 2 cut(s) 2187, 2595
BspACI CCGC 9 cut(s) 5, 145, 503, 769, 1118, 1148, 1733, 1989, 2510
BspANI GGCC 8 cut(s) 90, 172, 244, 458, 772, 1117, 1457, 1789
BspCNI CTCAG 6 cut(s) 781, 1246, 1644, 2053, 2723, 2932
BspHI TCATGA 1 cut(s) 1957
BspLI GGNNCC 1 cut(s) 1790
BspMAI CTGCAG 4 cut(s) 1716, 2407, 2749, 2881
BspMI ACCTGC 5 cut(s) 686, 1250, 1705, 2410, 2712
BspPI GGATC 3 cut(s) 611, 998, 2084
BspT104I TTCGAA 3 cut(s) 254, 518, 2453
BspTI CTTAAG 1 cut(s) 752
BsrDI GCAATG 3 cut(s) 621, 1665, 2125
BsrFI RCCGGY 1 cut(s) 1313
BsrI ACTGG 1 cut(s) 1002
BssAI RCCGGY 1 cut(s) 1313
BssECI CCNNGG 6 cut(s) 85, 420, 1623, 2187, 2595, 2845
BssNI GRCGYC 1 cut(s) 2931
BssT1I CCWWGG 3 cut(s) 1623, 2187, 2595
Bst2UI CCWGG 3 cut(s) 1892, 2079, 2846
Bst4CI ACNGT 6 cut(s) 296, 495, 978, 1925, 1945, 2152
Bst6I CTCTTC 5 cut(s) 521, 816, 1990, 2553, 2978
BstACI GRCGYC 1 cut(s) 2931
BstAFI CTTAAG 1 cut(s) 752
BstBI TTCGAA 3 cut(s) 254, 518, 2453
BstC8I GCNNGC 2 cut(s) 2036, 2299
BstDEI CTNAG 8 cut(s) 789, 1175, 1254, 1545, 1652, 2061, 2710, 2940
BstDSI CCRYGG 2 cut(s) 2187, 2595
BstF5I GGATG 9 cut(s) 619, 649, 1063, 1333, 1757, 2533, 2605, 2830, 2882
BstMAI GTCTC 1 cut(s) 785
BstMCI CGRYCG 2 cut(s) 745, 1118
BstMWI GCNNNNNNNGC 5 cut(s) 74, 1028, 1697, 2591, 2600
BstNI CCWGG 3 cut(s) 1892, 2079, 2846
BstNSI RCATGY 2 cut(s) 1749, 2168
BstSCI CCNGG 3 cut(s) 1890, 2077, 2844
BstSFI CTRYAG 4 cut(s) 1712, 2403, 2745, 2877
BstSLI GKGCMC 1 cut(s) 2172
BstV1I GCAGC 7 cut(s) 318, 1594, 1678, 2050, 2494, 2863, 2891
BstV2I GAAGAC 4 cut(s) 932, 1370, 2072, 2664
BstX2I RGATCY 2 cut(s) 1003, 2410
BstYI RGATCY 2 cut(s) 1003, 2410
BstZI CGGCCG 1 cut(s) 1115
BsuI GTATCC 1 cut(s) 2065
BsuRI GGCC 8 cut(s) 90, 172, 244, 458, 772, 1117, 1457, 1789
BtgI CCRYGG 2 cut(s) 2187, 2595
BtgZI GCGATG 1 cut(s) 2787
BtrI CACGTC 1 cut(s) 1376
BtsCI GGATG 9 cut(s) 619, 649, 1063, 1333, 1757, 2533, 2605, 2830, 2882
BtsI GCAGTG 1 cut(s) 2742
BtsIMutI CAGTG 7 cut(s) 301, 1517, 1567, 1930, 2237, 2692, 2742
BveI ACCTGC 5 cut(s) 686, 1250, 1705, 2410, 2712
Cac8I GCNNGC 2 cut(s) 2036, 2299
CaiI CAGNNNCTG 3 cut(s) 278, 572, 1031
CciI TCATGA 1 cut(s) 1957
Cfr10I RCCGGY 1 cut(s) 1313
Cfr13I GGNCC 5 cut(s) 243, 1193, 1456, 1788, 2366
CseI GACGC 1 cut(s) 2939
Csp6I GTAC 8 cut(s) 367, 496, 1141, 1244, 1585, 1686, 2153, 2399
CspCI CAANNNNNGTGG 2 cut(s) 337, 372
CviQI GTAC 8 cut(s) 367, 496, 1141, 1244, 1585, 1686, 2153, 2399
DdeI CTNAG 8 cut(s) 789, 1175, 1254, 1545, 1652, 2061, 2710, 2940
DraI TTTAAA 2 cut(s) 777, 1125
DrdI GACNNNNNNGTC 1 cut(s) 2825
DseDI GACNNNNNNGTC 1 cut(s) 2825
EaeI YGGCCR 2 cut(s) 456, 1115
EagI CGGCCG 1 cut(s) 1115
Eam1104I CTCTTC 5 cut(s) 521, 816, 1990, 2553, 2978
EarI CTCTTC 5 cut(s) 521, 816, 1990, 2553, 2978
EciI GGCGGA 3 cut(s) 20, 518, 1978
EclXI CGGCCG 1 cut(s) 1115
Eco130I CCWWGG 3 cut(s) 1623, 2187, 2595
Eco147I AGGCCT 1 cut(s) 172
Eco24I GRGCYC 1 cut(s) 2109
Eco32I GATATC 1 cut(s) 538
Eco47I GGWCC 2 cut(s) 1193, 2366
Eco52I CGGCCG 1 cut(s) 1115
Eco57I CTGAAG 9 cut(s) 105, 255, 399, 1008, 1791, 1950, 2022, 2160, 2409
EcoRI GAATTC 1 cut(s) 193
EcoRII CCWGG 3 cut(s) 1890, 2077, 2844
EcoRV GATATC 1 cut(s) 538
EcoT14I CCWWGG 3 cut(s) 1623, 2187, 2595
EcoT22I ATGCAT 2 cut(s) 709, 1747
EcoT38I GRGCYC 1 cut(s) 2109
ErhI CCWWGG 3 cut(s) 1623, 2187, 2595
FalI AAGNNNNNCTT 4 cut(s) 746, 778, 1896, 1928
FaqI GGGAC 2 cut(s) 260, 583
FauNDI CATATG 1 cut(s) 1420
FblI GTMKAC 1 cut(s) 1708
FokI GGATG 9 cut(s) 626, 656, 1050, 1340, 1764, 2540, 2612, 2837, 2869
FriOI GRGCYC 1 cut(s) 2109
FspBI CTAG 4 cut(s) 986, 1881, 2630, 2895
GsuI CTGGAG 2 cut(s) 1913, 2100
HaeIII GGCC 8 cut(s) 90, 172, 244, 458, 772, 1117, 1457, 1789
HapII CCGG 1 cut(s) 1314
HgaI GACGC 1 cut(s) 2939
Hin1I GRCGYC 1 cut(s) 2931
HincII GTYRAC 2 cut(s) 1153, 2148
HindII GTYRAC 2 cut(s) 1153, 2148
HindIII AAGCTT 4 cut(s) 470, 749, 2010, 2339
HpaI GTTAAC 1 cut(s) 1153
HpaII CCGG 1 cut(s) 1314
HphI GGTGA 6 cut(s) 277, 461, 1096, 1280, 2549, 2738
Hpy166II GTNNAC 7 cut(s) 498, 1099, 1153, 1709, 2148, 2170, 2858
Hpy8I GTNNAC 7 cut(s) 498, 1099, 1153, 1709, 2148, 2170, 2858
Hpy99I CGWCG 2 cut(s) 2654, 2810
HpyCH4III ACNGT 6 cut(s) 296, 495, 978, 1925, 1945, 2152
HpyCH4IV ACGT 2 cut(s) 1375, 1705
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 1028, 1697, 2591, 2600
HpyF3I CTNAG 8 cut(s) 789, 1175, 1254, 1545, 1652, 2061, 2710, 2940
HpySE526I ACGT 2 cut(s) 1375, 1705
Hsp92I GRCGYC 1 cut(s) 2931
KspAI GTTAAC 1 cut(s) 1153
LmnI GCTCC 2 cut(s) 958, 1815
Lsp1109I GCAGC 7 cut(s) 318, 1594, 1678, 2050, 2494, 2863, 2891
MaeI CTAG 4 cut(s) 986, 1881, 2630, 2895
MaeII ACGT 2 cut(s) 1375, 1705
MaeIII GTNAC 4 cut(s) 283, 431, 897, 1058
MflI RGATCY 2 cut(s) 1003, 2410
MhlI GDGCHC 4 cut(s) 51, 1812, 2109, 2172
MlsI TGGCCA 1 cut(s) 458
MluCI AATT 8 cut(s) 193, 383, 628, 1167, 1364, 1554, 1948, 2322
MluNI TGGCCA 1 cut(s) 458
MlyI GAGTC 4 cut(s) 1094, 1410, 1829, 1976
Mox20I TGGCCA 1 cut(s) 458
Mph1103I ATGCAT 2 cut(s) 709, 1747
MroXI GAANNNNTTC 1 cut(s) 1914
MscI TGGCCA 1 cut(s) 458
MseI TTAA 8 cut(s) 753, 776, 990, 1124, 1152, 1394, 2922, 3001
MslI CAYNNNNRTG 3 cut(s) 359, 1750, 1923
Msp20I TGGCCA 1 cut(s) 458
MspA1I CMGCKG 3 cut(s) 769, 1607, 1691
MspCI CTTAAG 1 cut(s) 752
MspI CCGG 1 cut(s) 1314
MspR9I CCNGG 3 cut(s) 1892, 2079, 2846
Mva1269I GAATGC 2 cut(s) 842, 1412
MvaI CCWGG 3 cut(s) 1892, 2079, 2846
MwoI GCNNNNNNNGC 5 cut(s) 74, 1028, 1697, 2591, 2600
NcoI CCATGG 2 cut(s) 2187, 2595
NdeI CATATG 1 cut(s) 1420
NlaIV GGNNCC 1 cut(s) 1790
NmeAIII GCCGAG 2 cut(s) 66, 445
NmuCI GTSAC 3 cut(s) 283, 431, 1058
NsiI ATGCAT 2 cut(s) 709, 1747
NspI RCATGY 2 cut(s) 1749, 2168
NspV TTCGAA 3 cut(s) 254, 518, 2453
PagI TCATGA 1 cut(s) 1957
PaqCI CACCTGC 1 cut(s) 1250
PceI AGGCCT 1 cut(s) 172
PciI ACATGT 1 cut(s) 2164
PctI GAATGC 2 cut(s) 842, 1412
PdmI GAANNNNTTC 1 cut(s) 1914
PfeI GAWTC 9 cut(s) 116, 319, 1352, 1370, 1549, 1961, 2358, 2579, 2948
PfoI TCCNGGA 1 cut(s) 1890
Ple19I CGATCG 1 cut(s) 745
PleI GAGTC 4 cut(s) 1094, 1409, 1828, 1976
PpsI GAGTC 4 cut(s) 1094, 1409, 1828, 1976
PscI ACATGT 1 cut(s) 2164
PshBI ATTAAT 1 cut(s) 1394
Psp6I CCWGG 3 cut(s) 1890, 2077, 2844
PspGI CCWGG 3 cut(s) 1890, 2077, 2844
PspN4I GGNNCC 1 cut(s) 1790
PspPI GGNCC 5 cut(s) 243, 1193, 1456, 1788, 2366
PstI CTGCAG 4 cut(s) 1716, 2407, 2749, 2881
PstNI CAGNNNCTG 3 cut(s) 278, 572, 1031
PsuI RGATCY 2 cut(s) 1003, 2410
PvuI CGATCG 1 cut(s) 745
PvuII CAGCTG 2 cut(s) 1607, 1691
RsaI GTAC 8 cut(s) 368, 497, 1142, 1245, 1586, 1687, 2154, 2400
RsaNI GTAC 8 cut(s) 367, 496, 1141, 1244, 1585, 1686, 2153, 2399
RseI CAYNNNNRTG 3 cut(s) 359, 1750, 1923
SaqAI TTAA 8 cut(s) 753, 776, 990, 1124, 1152, 1394, 2922, 3001
Sau96I GGNCC 5 cut(s) 243, 1193, 1456, 1788, 2366
ScaI AGTACT 1 cut(s) 2154
SchI GAGTC 4 cut(s) 1094, 1410, 1829, 1976
ScrFI CCNGG 3 cut(s) 1892, 2079, 2846
SduI GDGCHC 4 cut(s) 51, 1812, 2109, 2172
SfcI CTRYAG 4 cut(s) 1712, 2403, 2745, 2877
SfuI TTCGAA 3 cut(s) 254, 518, 2453
SinI GGWCC 2 cut(s) 1193, 2366
SmiMI CAYNNNNRTG 3 cut(s) 359, 1750, 1923
SmlI CTYRAG 4 cut(s) 53, 752, 875, 1838
SmoI CTYRAG 4 cut(s) 53, 752, 875, 1838
Sse9I AATT 8 cut(s) 193, 383, 628, 1167, 1364, 1554, 1948, 2322
SseBI AGGCCT 1 cut(s) 172
SsiI CCGC 9 cut(s) 5, 145, 503, 769, 1118, 1148, 1733, 1989, 2510
SspI AATATT 1 cut(s) 2218
SspMI CTAG 4 cut(s) 986, 1881, 2630, 2895
StuI AGGCCT 1 cut(s) 172
StyD4I CCNGG 3 cut(s) 1890, 2077, 2844
StyI CCWWGG 3 cut(s) 1623, 2187, 2595
TaaI ACNGT 6 cut(s) 296, 495, 978, 1925, 1945, 2152
TaiI ACGT 2 cut(s) 1378, 1708
TaqI TCGA 7 cut(s) 20, 45, 138, 211, 254, 518, 2453
TaqII GACCGA 1 cut(s) 1292
TasI AATT 8 cut(s) 193, 383, 628, 1167, 1364, 1554, 1948, 2322
TatI WGTACW 3 cut(s) 495, 1584, 2152
TauI GCSGC 3 cut(s) 772, 1120, 1735
TfiI GAWTC 9 cut(s) 116, 319, 1352, 1370, 1549, 1961, 2358, 2579, 2948
Tru1I TTAA 8 cut(s) 753, 776, 990, 1124, 1152, 1394, 2922, 3001
Tru9I TTAA 8 cut(s) 753, 776, 990, 1124, 1152, 1394, 2922, 3001
TscAI CASTG 7 cut(s) 301, 1524, 1567, 1930, 2244, 2692, 2749
TseFI GTSAC 3 cut(s) 283, 431, 1058
TseI GCWGC 7 cut(s) 331, 1607, 1691, 2038, 2507, 2876, 2879
Tsp45I GTSAC 3 cut(s) 283, 431, 1058
TspGWI ACGGA 1 cut(s) 2875
TspRI CASTG 7 cut(s) 301, 1524, 1567, 1930, 2244, 2692, 2749
Vha464I CTTAAG 1 cut(s) 752
VneI GTGCAC 1 cut(s) 2168
VpaK11BI GGWCC 2 cut(s) 1193, 2366
VspI ATTAAT 1 cut(s) 1394
XapI RAATTY 2 cut(s) 193, 1167
XbaI TCTAGA 1 cut(s) 2629
XceI RCATGY 2 cut(s) 1749, 2168
XmiI GTMKAC 1 cut(s) 1708
XmnI GAANNNNTTC 1 cut(s) 1914
XspI CTAG 4 cut(s) 986, 1881, 2630, 2895
ZrmI AGTACT 1 cut(s) 2154
Zsp2I ATGCAT 2 cut(s) 709, 1747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.