Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0003765

Physical Location & Seq

Genomic Coordinates Forward (+)

5587317 .. 5606682

Gene Structure 19366 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g05280.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3252 bp

ATGTCGAGCGGCAGTGAGGATGAGGACGAGCTCCTCCAGATGGCTCTCAAGGAGCAATCTCAGAGAGATGTGAATTATCAGAAGGCAGCCTCGAATCGGAGACCCGTTGCGAATTACGTCCAAGCCCCTCCGCCTCCTCCCAACAAGAAGCCTCCGGCGCAGCAGCAGAAGCGGCGCGTGGTTGACGAGGACGACGAATCCGATGTCGATATGCTGAGCATATCCAGCGGCGATGAGGACTCCACCTCCCGAGATCAGCAACGCGTGCGCTTCCGCGGCTCTTCTGGTGCTTCCCGACCCAAAGACGACGACGCTGCTCCCTGGGACGGCGACGAGCCCGGTTGCTGGAAGCACGTCGACGAGGCCGAGCTTGCTCGCAGGGTTCGTGGAATGCGAGAGACGAGAGCAGCGCCGGTGGCCATTAAAGTTGAGCGTAAAGTGTCTTCTAATGCAGTTTTGGCCAGGAAGGGACTAAGCACATTGCAGTCCTTCCCTCGTGGCATGGAGTGCATTGATCCCCTCGGCCTCGGCATTATAGATAACAAAACTTTAAGACTCATAACCGAATCCTCCGACTATTCTCCAACCAAGGATGACAAATTGGATAACACCCTTCGTGAGAAGTTGTTGTATTTCTCTGAGAAATTTGATGCCAAGCTCTTCATCTCCCGGATACACCAAGTAACAAGTGCAGCTGATTTGGAGGCTGGTGCTCTCGCTCTTAAAAGTGATCTTATAGGACGCACTCAGCAGAGAAAGCAATTGGTCAAAGACAATTTTGACTGCTTCGTCTCTTGCAAAACCACAATTGATGATATCGAGTCAAAATTAAAACGGATTGAAGAAGATCCTGAAGGTTCAGGGACTGCTCATTTGTTCAAATGTATGGAAGGAGTCAGTTCATTGGCTAATCGTGCTTTCCAGCATCTGTTCGAGAGACAGGCCGAGGCTGAAAAGATTAGGTCAGTCCAGGGAATGCTCCAGAGGTTCCGAACGCTATTCAACTTGCCCAGTACAATTCGTGGTAGCATAAGCAAGGGTGAATATGACTTGGCTGTTAGGGAATACAAGAAGGCGAAGTCAATTGCTCTCCCTTCTCATGTGGGAATACTCAAACGTGTTCTTGAAGAGGTTGAAAAAGTGATGCATGAGTTTAAAGGCACTCTATACAAGTCTATGGAAGATCCACAAATAGATCTAACCAATCTTGAAAATACAGTAAGACTGCTGTTGGAGCTGGAGCCTGAGTCAGATCCTGTTTGGCATTATTTAAACATACAGAATAACAGAATTCGAGGTTTGCTTGAAAAGTGCACATTAGATCATGAAGCTAGAATGGAGACTCTACATAATGTTTTACGTGAAAGGGCTCTGTTTGATGCAAGGTGGAAGCAGATTCAACAAGATACTAATCATTCTTCAGACGCTGTTACTTCTGAAAACAACAATCTTCTGGTTGATTCTGTGGCGGTCGACTTGACTGGTGAAGAAGTTGATGCTCTCAGAGGGAGGTATATTCGTAGATTGACTGCTGTACTTACACATCACATACCAGCATTCTGGAAAGTTGCACTTTCTGTTTTCAGCGGAAAATTCACAAAGTCATCCCAAGTTTCTTCGGAATCAAATGCTACTACTCCAGCAAATAAATCTGAGGAAAAAGTTGGAGATGGGAAATACTCTACTCATTCACTTGAAGAAGTTTCTGTAATGATACGCAATACTATAACAGCATATGAAGTGAAGGTTTGCAATACCTTTCGTGATCTTGAAGAATCAAATATTCTGCAACCATATATGAGTGATGCAATAATTGAAATATCCAAAGCTTGTGAAGCCTTTGAAGCGAAGGAATCATCTCCATCTATTGCTGTAATTGCAACTCGAGCACTTCAGTCCGAGATTACAAAGATCTACATCCTAAGGCTTTGCTCATGGATGCGGGCATCAACGGTGGAGATTTCAAAAGATGAGGCATGGGTTCCAGTTTCAGTTCTTGAAAGGAATAAATCTCCCTATACAATATCTTACTTGCCGCTAGCTTTCCGTAGTGTTATGACCTCAGCAATGGATCAGATCAAATTGATGATTCAGAGATTAAGGAGTGAGGCAACGAGGTCAGAGGATATGTTTGCGCAACTCCAAGACATACAAGAATCTGTCAGACTTGCATTCTTGAACTGTATTTTAGATTTTGCAGGTCACCTGGAGCGTATAGGTAGTGAGCTTGCTCAAAACAGATCAGGCAAAGGAAGCTCACATGTAGAAAATGGATATCCACAGAACTTGGAAGAGAATCTAATATTTGATCTCAGGGGAAGTGTCGTGGGTCCACATCAAAAGTTGTTAATAGTCTTAAGTAATATTGGCTATTGCAAAGACGAGCTTTCTTATGAGCTGTACAACAACTACAAACATATCTGGCTACAGTCGAGGGAAAGAGAGGAAGAGGATAGTGACGTACAAGATTTAGTGATGTCTTTTTCTGGGCTGGAAGAGAACGTTCTTGAACAGTATACATTTGCTAAGGCGAATTTGATTAGAACAGCTGCTTCGAACTATTTCTTAGATTCTGGTGTTCAATGGGGAGCAGCACCTGCTGTAAAAGGTGTACGTGATGCTGCTGTTGAGTTGCTGCACACTTTGGTAGCTGTACATGCAGAGGTTTTTTCTGGGGCTAAGCCTCTTCTGGACAGGACACTTGGCATTCTTGTAGAAGGTCTGATTGATACTTTTATCAGCCTGGTCCACGAAAACAGTACAAAAGAGCTTAGGTCCCTTGACGCGAATGGTTTCTGCCAGCTCATGCTTGAGCTTGAATATTTCGAGACGATTTTAAATCCATATTTTACACCTGATGCAAGAGAGGCTCTGAAGTCTTTACAAGGTCTGCTTCTGAATAAAGCAACTGAAACTGTGACTGAAAATGTGGAGAATCCAGGGCACAACCGGCGAGCGACGCGTGGGAGTGAAGATGCAGTTACAGATGATAAACCGCCAGGGATGACTATGTCACCAGATGATCTGATTGCTCATGCCCAGCAGTATAGCTCTGAGTTACTTCAAGCAGAGCTTGAGAGGACTCACATCAATACAGCATGCTTTGTTGAGTCAATTCCATTGGACTCAGCACCAGAATCAGCCAAACGCGCTTATGCTTCCTTTAGGGGGTCACTGGATTCTCCCAGTAGAAACTATAGAGGCACACAAGGAACAGCATCTCCAAGCTACGCCAGGAATAGGCGTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0001927 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0007154 GO:0008037 GO:0008150 GO:0009506 GO:0009856 GO:0009875 GO:0009987 GO:0016020 GO:0016043 GO:0016192 GO:0022406 GO:0022414 GO:0022607 GO:0030054 GO:0031982 GO:0032501 GO:0032940 GO:0032991 GO:0034622 GO:0043226 GO:0043227 GO:0043230 GO:0043933 GO:0044085 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0046903 GO:0048278 GO:0048544 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051704 GO:0055044 GO:0060321 GO:0065003 GO:0070062 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056 GO:1903561

KEGG Pathways

Metabolic & Signaling

ko04014 map04014

Pfam Domains

Protein Families

Sec5

Protein Analysis

1084

Amino Acids

121.73

Weight (kDa)

5.51

Isoelectric Point (pI)

53.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec5	PF15469	172 - 976	1.2e-142	Exocyst complex component Sec5
Dor1	PF04124	239 - 437	1.9e-07	Dor1-like family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21170 AT1G21170 AT1G76850
fragaria_vesca	FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280
malus_domestica	MD02G1241200.v1.1 MD02G1241400.v1.1 MD07G1075500.v1.1
prunus_persica	Prupe.8G058700_v2.0.a1 Prupe.8G058700_v2.0.a1
pyrus_communis	pycom02g20640 pycom02g20660 pycom02g20670 pycom02g20680 pycom02g20750 pycom02g20760 pycom07g05950
rosa_chinensis	RchiOBHm_Chr1g0332001
rosa_laevigata	RLG00000029699
rosa_multiflora	Rmu_co8474765.1_g000001 Rmu_sc0003358.1_g000014
rosa_roxburghii	Rroxscaffold_4G00318510
rosa_rugosa	Rorug01G0097700
rosa_samantha	Rh1AG121600 Rh1BG093100 Rh1CG116400 Rh1DG127300
rosa_wichuraiana	Rw1G009920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2605
AasI	GACNNNNNNGTC	1 cut(s)	788
Acc16I	TGCGCA	1 cut(s)	2136
Acc36I	ACCTGC	2 cut(s)	2189, 2605
AccBSI	CCGCTC	1 cut(s)	9
AccI	GTMKAC	3 cut(s)	357, 1473, 2516
AccII	CGCG	6 cut(s)	177, 264, 276, 2786, 2962, 3150
AclI	AACGTT	1 cut(s)	2502
AclWI	GGATC	5 cut(s)	509, 842, 1178, 1247, 2079
AcoI	YGGCCR	2 cut(s)	417, 459
AcsI	RAATTY	4 cut(s)	644, 1290, 1592, 2533
AcuI	CTGAAG	4 cut(s)	873, 1404, 1877, 2894
AcyI	GRCGYC	1 cut(s)	3244
AfaI	GTAC	7 cut(s)	1015, 1536, 2402, 2463, 2613, 2655, 2761
AfiI	CCNNNNNNNGG	6 cut(s)	40, 96, 326, 345, 3168, 3240
AflII	CTTAAG	1 cut(s)	2356
AflIII	ACRYGT	4 cut(s)	262, 1117, 2260, 2960
AjiI	CACGTC	1 cut(s)	355
AjnI	CCWGG	8 cut(s)	320, 461, 969, 2205, 2742, 2938, 2998, 3233
AloI	GAACNNNNNNTCC	2 cut(s)	3205, 3237
Alw21I	GWGCWC	4 cut(s)	33, 715, 1316, 1891
Alw26I	GTCTC	6 cut(s)	94, 392, 796, 931, 1334, 2822
Alw44I	GTGCAC	1 cut(s)	1312
AlwI	GGATC	5 cut(s)	509, 842, 1178, 1247, 2079
AlwNI	CAGNNNCTG	5 cut(s)	866, 928, 1256, 1427, 2597
Ama87I	CYCGRG	2 cut(s)	249, 1884
AoxI	GGCC	5 cut(s)	363, 417, 459, 523, 942
ApaLI	GTGCAC	1 cut(s)	1312
ApoI	RAATTY	4 cut(s)	644, 1290, 1592, 2533
ArsI	GACNNNNNNTTYG	4 cut(s)	189, 221, 856, 888
Asp700I	GAANNNNTTC	2 cut(s)	2561, 2792
AspLEI	GCGC	6 cut(s)	160, 177, 270, 412, 2137, 3152
AspS9I	GGNCC	3 cut(s)	2330, 2746, 2775
AsuC2I	CCSGG	2 cut(s)	339, 670
AsuHPI	GGTGA	4 cut(s)	1052, 1496, 2195, 3006
AsuII	TTCGAA	1 cut(s)	2555
AsuNHI	GCTAGC	1 cut(s)	2038
AvaI	CYCGRG	2 cut(s)	249, 1884
AvaII	GGWCC	3 cut(s)	2330, 2746, 2775
AxyI	CCTNAGG	1 cut(s)	1922
BaeGI	GKGCMC	2 cut(s)	1316, 2946
BalI	TGGCCA	2 cut(s)	419, 461
BanII	GRGCYC	3 cut(s)	33, 339, 1372
BarI	GAAGNNNNNNTAC	2 cut(s)	427, 459
BauI	CACGAG	1 cut(s)	495
BbsI	GAAGAC	1 cut(s)	435
Bbv12I	GWGCWC	4 cut(s)	33, 715, 1316, 1891
BbvCI	CCTCAGC	1 cut(s)	2062
BccI	CCATC	3 cut(s)	34, 1664, 1870
BceAI	ACGGC	1 cut(s)	343
BcgI	CGANNNNNNTGC	2 cut(s)	296, 330
BciT130I	CCWGG	8 cut(s)	322, 463, 971, 2207, 2744, 2940, 3000, 3235
BciVI	GTATCC	1 cut(s)	666
BcnI	CCSGG	2 cut(s)	339, 670
BcoDI	GTCTC	6 cut(s)	94, 392, 796, 931, 1334, 2822
BfaI	CTAG	2 cut(s)	1332, 2039
BfmI	CTRYAG	2 cut(s)	2426, 3196
BfoI	RGCGCY	1 cut(s)	413
BfrI	CTTAAG	1 cut(s)	2356
BfuAI	ACCTGC	2 cut(s)	2189, 2605
BfuI	GTATCC	1 cut(s)	666
BglII	AGATCT	2 cut(s)	1195, 1911
BlpI	GCTNAGC	2 cut(s)	215, 2679
Bme18I	GGWCC	3 cut(s)	2330, 2746, 2775
BmeT110I	CYCGRG	2 cut(s)	249, 1884
BmgBI	CACGTC	1 cut(s)	355
BmgT120I	GGNCC	3 cut(s)	2330, 2746, 2775
BmiI	GGNNCC	5 cut(s)	989, 1242, 1983, 2331, 2777
BmrI	ACTGGG	2 cut(s)	1005, 3180
BmtI	GCTAGC	1 cut(s)	2042
BmuI	ACTGGG	2 cut(s)	1005, 3180
BpiI	GAAGAC	1 cut(s)	435
BpmI	CTGGAG	5 cut(s)	20, 965, 1259, 1623, 2228
Bpu10I	CCTNAGC	3 cut(s)	2062, 2526, 2771
Bpu1102I	GCTNAGC	2 cut(s)	215, 2679
Bpu14I	TTCGAA	1 cut(s)	2555
BpuEI	CTTGAG	3 cut(s)	32, 2831, 3095
BpuMI	CCSGG	2 cut(s)	339, 670
BsaAI	YACGTR	2 cut(s)	1361, 2615
BsaBI	GATNNNNATC	2 cut(s)	1410, 1916
BsaHI	GRCGYC	1 cut(s)	3244
BsaI	GGTCTC	1 cut(s)	94
BsaXI	ACNNNNNCTCC	6 cut(s)	230, 260, 1232, 1262, 3205, 3235
Bsc4I	CCNNNNNNNGG	6 cut(s)	40, 96, 326, 345, 3168, 3240
Bse118I	RCCGGY	2 cut(s)	412, 2949
Bse1I	ACTGG	5 cut(s)	1011, 1486, 1985, 3180, 3186
Bse21I	CCTNAGG	1 cut(s)	1922
Bse3DI	GCAATG	2 cut(s)	479, 2073
Bse8I	GATNNNNATC	2 cut(s)	1410, 1916
BseBI	CCWGG	8 cut(s)	322, 463, 971, 2207, 2744, 2940, 3000, 3235
BseGI	GGATG	6 cut(s)	25, 598, 1604, 1917, 1944, 3009
BseJI	GATNNNNATC	2 cut(s)	1410, 1916
BseLI	CCNNNNNNNGG	6 cut(s)	40, 96, 326, 345, 3168, 3240
BseMI	GCAATG	2 cut(s)	479, 2073
BseNI	ACTGG	5 cut(s)	1011, 1486, 1985, 3180, 3186
BseRI	GAGGAG	2 cut(s)	23, 126
BseSI	GKGCMC	2 cut(s)	1316, 2946
BseYI	CCCAGC	1 cut(s)	3039
BsgI	GTGCAG	2 cut(s)	711, 2621
Bsh1236I	CGCG	6 cut(s)	177, 264, 276, 2786, 2962, 3150
Bsh1285I	CGRYCG	1 cut(s)	1473
BshFI	GGCC	5 cut(s)	365, 419, 461, 525, 944
BsiEI	CGRYCG	1 cut(s)	1473
BsiHKAI	GWGCWC	4 cut(s)	33, 715, 1316, 1891
BsiHKCI	CYCGRG	2 cut(s)	249, 1884
BsiSI	CCGG	5 cut(s)	155, 339, 413, 670, 2950
BslFI	GGGAC	4 cut(s)	338, 483, 877, 2761
BslI	CCNNNNNNNGG	6 cut(s)	40, 96, 326, 345, 3168, 3240
BsmAI	GTCTC	6 cut(s)	94, 392, 796, 931, 1334, 2822
BsmBI	CGTCTC	3 cut(s)	392, 796, 2822
BsmFI	GGGAC	4 cut(s)	338, 483, 877, 2761
BsmI	GAATGC	5 cut(s)	396, 981, 1556, 2171, 2706
BsnI	GGCC	5 cut(s)	365, 419, 461, 525, 944
Bso31I	GGTCTC	1 cut(s)	94
BsoBI	CYCGRG	2 cut(s)	249, 1884
Bsp119I	TTCGAA	1 cut(s)	2555
Bsp1286I	GDGCHC	7 cut(s)	33, 339, 715, 1316, 1372, 1891, 2946
Bsp1407I	TGTACA	2 cut(s)	2400, 2653
Bsp1720I	GCTNAGC	2 cut(s)	215, 2679
BspANI	GGCC	5 cut(s)	365, 419, 461, 525, 944
BspFNI	CGCG	6 cut(s)	177, 264, 276, 2786, 2962, 3150
BspHI	TCATGA	1 cut(s)	1324
BspLI	GGNNCC	5 cut(s)	989, 1242, 1983, 2331, 2777
BspMI	ACCTGC	2 cut(s)	2189, 2605
BspOI	GCTAGC	1 cut(s)	2042
BspPI	GGATC	5 cut(s)	509, 842, 1178, 1247, 2079
BspQI	GCTCTTC	2 cut(s)	286, 665
BspT104I	TTCGAA	1 cut(s)	2555
BspTI	CTTAAG	1 cut(s)	2356
BspTNI	GGTCTC	1 cut(s)	94
BsrBI	CCGCTC	1 cut(s)	9
BsrDI	GCAATG	2 cut(s)	479, 2073
BsrFI	RCCGGY	2 cut(s)	412, 2949
BsrGI	TGTACA	2 cut(s)	2400, 2653
BsrI	ACTGG	5 cut(s)	1011, 1486, 1985, 3180, 3186
BssAI	RCCGGY	2 cut(s)	412, 2949
BssNAI	GTATAC	1 cut(s)	2517
BssNI	GRCGYC	1 cut(s)	3244
BssSI	CACGAG	1 cut(s)	495
BssT1I	CCWWGG	1 cut(s)	588
Bst1107I	GTATAC	1 cut(s)	2517
Bst2BI	CACGAG	1 cut(s)	495
Bst2UI	CCWGG	8 cut(s)	322, 463, 971, 2207, 2744, 2940, 3000, 3235
Bst4CI	ACNGT	7 cut(s)	1219, 1954, 2183, 2430, 2514, 2759, 2917
Bst6I	CTCTTC	7 cut(s)	286, 665, 1122, 2286, 2442, 2490, 2691
BstACI	GRCGYC	1 cut(s)	3244
BstAFI	CTTAAG	1 cut(s)	2356
BstAPI	GCANNNNNTGC	3 cut(s)	265, 507, 2597
BstAUI	TGTACA	2 cut(s)	2400, 2653
BstBAI	YACGTR	2 cut(s)	1361, 2615
BstBI	TTCGAA	1 cut(s)	2555
BstC8I	GCNNGC	9 cut(s)	266, 372, 376, 1944, 2040, 2229, 2801, 2955, 3100
BstDSI	CCRYGG	1 cut(s)	274
BstEII	GGTNACC	1 cut(s)	2201
BstF5I	GGATG	6 cut(s)	25, 598, 1604, 1917, 1944, 3009
BstFNI	CGCG	6 cut(s)	177, 264, 276, 2786, 2962, 3150
BstH2I	RGCGCY	1 cut(s)	413
BstHHI	GCGC	6 cut(s)	160, 177, 270, 412, 2137, 3152
BstMAI	GTCTC	6 cut(s)	94, 392, 796, 931, 1334, 2822
BstMCI	CGRYCG	1 cut(s)	1473
BstNI	CCWGG	8 cut(s)	322, 463, 971, 2207, 2744, 2940, 3000, 3235
BstNSI	RCATGY	3 cut(s)	2264, 2660, 3102
BstPI	GGTNACC	1 cut(s)	2201
BstSFI	CTRYAG	2 cut(s)	2426, 3196
BstSLI	GKGCMC	2 cut(s)	1316, 2946
BstUI	CGCG	6 cut(s)	177, 264, 276, 2786, 2962, 3150
BstV2I	GAAGAC	1 cut(s)	435
BstX2I	RGATCY	5 cut(s)	847, 1183, 1195, 1252, 1911
BstXI	CCANNNNNNTGG	1 cut(s)	1560
BstYI	RGATCY	5 cut(s)	847, 1183, 1195, 1252, 1911
BstZ17I	GTATAC	1 cut(s)	2517
Bsu36I	CCTNAGG	1 cut(s)	1922
BsuI	GTATCC	1 cut(s)	666
BsuRI	GGCC	5 cut(s)	365, 419, 461, 525, 944
BtgI	CCRYGG	1 cut(s)	274
BtgZI	GCGATG	1 cut(s)	246
BtrI	CACGTC	1 cut(s)	355
BtsCI	GGATG	6 cut(s)	25, 598, 1604, 1917, 1944, 3009
BtsI	GCAGTG	1 cut(s)	19
BtsIMutI	CAGTG	2 cut(s)	19, 3173
BveI	ACCTGC	2 cut(s)	2189, 2605
Cac8I	GCNNGC	9 cut(s)	266, 372, 376, 1944, 2040, 2229, 2801, 2955, 3100
CaiI	CAGNNNCTG	5 cut(s)	866, 928, 1256, 1427, 2597
CciI	TCATGA	1 cut(s)	1324
CfoI	GCGC	6 cut(s)	160, 177, 270, 412, 2137, 3152
Cfr10I	RCCGGY	2 cut(s)	412, 2949
Cfr13I	GGNCC	3 cut(s)	2330, 2746, 2775
Cfr42I	CCGCGG	1 cut(s)	277
CseI	GACGC	6 cut(s)	320, 750, 1433, 2792, 2968, 3233
Csp6I	GTAC	7 cut(s)	1014, 1535, 2401, 2462, 2612, 2654, 2760
CspCI	CAANNNNNGTGG	2 cut(s)	2268, 2303
CviQI	GTAC	7 cut(s)	1014, 1535, 2401, 2462, 2612, 2654, 2760
DraI	TTTAAA	3 cut(s)	1156, 1272, 2838
DrdI	GACNNNNNNGTC	1 cut(s)	788
DseDI	GACNNNNNNGTC	1 cut(s)	788
EaeI	YGGCCR	2 cut(s)	417, 459
Eam1104I	CTCTTC	7 cut(s)	286, 665, 1122, 2286, 2442, 2490, 2691
EarI	CTCTTC	7 cut(s)	286, 665, 1122, 2286, 2442, 2490, 2691
EciI	GGCGGA	1 cut(s)	120
Ecl136II	GAGCTC	1 cut(s)	31
Eco130I	CCWWGG	1 cut(s)	588
Eco24I	GRGCYC	3 cut(s)	33, 339, 1372
Eco31I	GGTCTC	1 cut(s)	94
Eco32I	GATATC	2 cut(s)	817, 2276
Eco47I	GGWCC	3 cut(s)	2330, 2746, 2775
Eco53kI	GAGCTC	1 cut(s)	31
Eco57I	CTGAAG	4 cut(s)	873, 1404, 1877, 2894
Eco81I	CCTNAGG	1 cut(s)	1922
Eco88I	CYCGRG	2 cut(s)	249, 1884
Eco91I	GGTNACC	1 cut(s)	2201
EcoICRI	GAGCTC	1 cut(s)	31
EcoO109I	RGGNCCY	1 cut(s)	2775
EcoO65I	GGTNACC	1 cut(s)	2201
EcoRI	GAATTC	1 cut(s)	1290
EcoRII	CCWGG	8 cut(s)	320, 461, 969, 2205, 2742, 2938, 2998, 3233
EcoRV	GATATC	2 cut(s)	817, 2276
EcoT14I	CCWWGG	1 cut(s)	588
EcoT22I	ATGCAT	1 cut(s)	1149
EcoT38I	GRGCYC	3 cut(s)	33, 339, 1372
ErhI	CCWWGG	1 cut(s)	588
Esp3I	CGTCTC	3 cut(s)	392, 796, 2822
FalI	AAGNNNNNCTT	8 cut(s)	1557, 1589, 2370, 2402, 2877, 2909, 3057, 3089
FaqI	GGGAC	4 cut(s)	338, 483, 877, 2761
FauI	CCCGC	1 cut(s)	1935
FauNDI	CATATG	1 cut(s)	1735
FblI	GTMKAC	3 cut(s)	357, 1473, 2516
FokI	GGATG	6 cut(s)	32, 605, 1591, 1904, 1951, 3016
FriOI	GRGCYC	3 cut(s)	33, 339, 1372
FspBI	CTAG	2 cut(s)	1332, 2039
FspI	TGCGCA	1 cut(s)	2136
GlaI	GCGC	6 cut(s)	159, 176, 269, 411, 2136, 3151
GsaI	CCCAGC	1 cut(s)	3043
GsuI	CTGGAG	5 cut(s)	20, 965, 1259, 1623, 2228
HaeII	RGCGCY	1 cut(s)	413
HaeIII	GGCC	5 cut(s)	365, 419, 461, 525, 944
HapII	CCGG	5 cut(s)	155, 339, 413, 670, 2950
HgaI	GACGC	6 cut(s)	320, 750, 1433, 2792, 2968, 3233
HhaI	GCGC	6 cut(s)	160, 177, 270, 412, 2137, 3152
Hin1I	GRCGYC	1 cut(s)	3244
Hin6I	GCGC	6 cut(s)	158, 175, 268, 410, 2135, 3150
HinP1I	GCGC	6 cut(s)	158, 175, 268, 410, 2135, 3150
HincII	GTYRAC	3 cut(s)	184, 358, 1474
HindII	GTYRAC	3 cut(s)	184, 358, 1474
HindIII	AAGCTT	1 cut(s)	1827
HpaII	CCGG	5 cut(s)	155, 339, 413, 670, 2950
HphI	GGTGA	4 cut(s)	1052, 1496, 2195, 3006
Hpy166II	GTNNAC	8 cut(s)	184, 358, 1314, 1474, 2333, 2517, 2612, 2749
Hpy8I	GTNNAC	8 cut(s)	184, 358, 1314, 1474, 2333, 2517, 2612, 2749
Hpy99I	CGWCG	8 cut(s)	197, 311, 314, 335, 359, 362, 2962, 3249
HpyCH4III	ACNGT	7 cut(s)	1219, 1954, 2183, 2430, 2514, 2759, 2917
HpyCH4IV	ACGT	7 cut(s)	117, 354, 1117, 1360, 2460, 2502, 2614
HpySE526I	ACGT	7 cut(s)	117, 354, 1117, 1360, 2460, 2502, 2614
Hsp92I	GRCGYC	1 cut(s)	3244
HspAI	GCGC	6 cut(s)	158, 175, 268, 410, 2135, 3150
KspI	CCGCGG	1 cut(s)	277
LguI	GCTCTTC	2 cut(s)	286, 665
LmnI	GCTCC	8 cut(s)	36, 52, 322, 984, 1234, 1240, 2209, 2588
MaeI	CTAG	2 cut(s)	1332, 2039
MaeII	ACGT	7 cut(s)	117, 354, 1117, 1360, 2460, 2502, 2614
MaeIII	GTNAC	9 cut(s)	682, 1429, 2201, 2456, 2917, 2980, 3012, 3057, 3171
MbiI	CCGCTC	1 cut(s)	9
MfeI	CAATTG	3 cut(s)	761, 807, 1083
MflI	RGATCY	5 cut(s)	847, 1183, 1195, 1252, 1911
MhlI	GDGCHC	7 cut(s)	33, 339, 715, 1316, 1372, 1891, 2946
MlsI	TGGCCA	2 cut(s)	419, 461
MluI	ACGCGT	2 cut(s)	262, 2960
MluNI	TGGCCA	2 cut(s)	419, 461
MlyI	GAGTC	9 cut(s)	233, 549, 830, 903, 1256, 1336, 3076, 3119, 3119
MmeI	TCCRAC	4 cut(s)	597, 608, 1212, 1645
Mox20I	TGGCCA	2 cut(s)	419, 461
Mph1103I	ATGCAT	1 cut(s)	1149
MroXI	GAANNNNTTC	2 cut(s)	2561, 2792
MscI	TGGCCA	2 cut(s)	419, 461
Msp20I	TGGCCA	2 cut(s)	419, 461
MspA1I	CMGCKG	5 cut(s)	228, 276, 695, 1587, 2549
MspCI	CTTAAG	1 cut(s)	2356
MspI	CCGG	5 cut(s)	155, 339, 413, 670, 2950
MunI	CAATTG	3 cut(s)	761, 807, 1083
Mva1269I	GAATGC	5 cut(s)	396, 981, 1556, 2171, 2706
MvaI	CCWGG	8 cut(s)	322, 463, 971, 2207, 2744, 2940, 3000, 3235
MvnI	CGCG	6 cut(s)	177, 264, 276, 2786, 2962, 3150
NciI	CCSGG	2 cut(s)	339, 670
NdeI	CATATG	1 cut(s)	1735
NheI	GCTAGC	1 cut(s)	2038
NlaIV	GGNNCC	5 cut(s)	989, 1242, 1983, 2331, 2777
NmeAIII	GCCGAG	4 cut(s)	391, 501, 507, 970
NmuCI	GTSAC	5 cut(s)	2201, 2456, 2917, 3012, 3171
NsbI	TGCGCA	1 cut(s)	2136
NsiI	ATGCAT	1 cut(s)	1149
NspI	RCATGY	3 cut(s)	2264, 2660, 3102
NspV	TTCGAA	1 cut(s)	2555
PaeI	GCATGC	1 cut(s)	3102
PaeR7I	CTCGAG	1 cut(s)	1884
PagI	TCATGA	1 cut(s)	1324
PaqCI	CACCTGC	1 cut(s)	2605
PasI	CCCWGGG	1 cut(s)	321
PciI	ACATGT	1 cut(s)	2260
PciSI	GCTCTTC	2 cut(s)	286, 665
PcsI	WCGNNNNNNNCGW	5 cut(s)	192, 198, 363, 382, 391
PctI	GAATGC	5 cut(s)	396, 981, 1556, 2171, 2706
PdmI	GAANNNNTTC	2 cut(s)	2561, 2792
PflFI	GACNNNGTC	1 cut(s)	3010
PfoI	TCCNGGA	1 cut(s)	668
PleI	GAGTC	9 cut(s)	233, 549, 829, 902, 1255, 1336, 3076, 3118, 3119
PpsI	GAGTC	9 cut(s)	233, 549, 829, 902, 1255, 1336, 3076, 3118, 3119
Ppu21I	YACGTR	2 cut(s)	1361, 2615
PpuMI	RGGWCCY	1 cut(s)	2775
PscI	ACATGT	1 cut(s)	2260
Psp124BI	GAGCTC	1 cut(s)	33
Psp1406I	AACGTT	1 cut(s)	2502
Psp5II	RGGWCCY	1 cut(s)	2775
Psp6I	CCWGG	8 cut(s)	320, 461, 969, 2205, 2742, 2938, 2998, 3233
PspEI	GGTNACC	1 cut(s)	2201
PspFI	CCCAGC	1 cut(s)	3039
PspGI	CCWGG	8 cut(s)	320, 461, 969, 2205, 2742, 2938, 2998, 3233
PspN4I	GGNNCC	5 cut(s)	989, 1242, 1983, 2331, 2777
PspPI	GGNCC	3 cut(s)	2330, 2746, 2775
PspPPI	RGGWCCY	1 cut(s)	2775
PspXI	VCTCGAGB	1 cut(s)	1884
PstNI	CAGNNNCTG	5 cut(s)	866, 928, 1256, 1427, 2597
PsuI	RGATCY	5 cut(s)	847, 1183, 1195, 1252, 1911
PsyI	GACNNNGTC	1 cut(s)	3010
PvuII	CAGCTG	2 cut(s)	695, 2549
RsaI	GTAC	7 cut(s)	1015, 1536, 2402, 2463, 2613, 2655, 2761
RsaNI	GTAC	7 cut(s)	1014, 1535, 2401, 2462, 2612, 2654, 2760
SacI	GAGCTC	1 cut(s)	33
SacII	CCGCGG	1 cut(s)	277
SalI	GTCGAC	2 cut(s)	356, 1472
SapI	GCTCTTC	2 cut(s)	286, 665
Sau96I	GGNCC	3 cut(s)	2330, 2746, 2775
SchI	GAGTC	9 cut(s)	233, 549, 830, 903, 1256, 1336, 3076, 3119, 3119
SduI	GDGCHC	7 cut(s)	33, 339, 715, 1316, 1372, 1891, 2946
SfcI	CTRYAG	2 cut(s)	2426, 3196
Sfr274I	CTCGAG	1 cut(s)	1884
Sfr303I	CCGCGG	1 cut(s)	277
SfuI	TTCGAA	1 cut(s)	2555
SgrAI	CRCCGGYG	1 cut(s)	412
SgrBI	CCGCGG	1 cut(s)	277
SgrDI	CGTCGACG	1 cut(s)	356
SinI	GGWCC	3 cut(s)	2330, 2746, 2775
SlaI	CTCGAG	1 cut(s)	1884
SmlI	CTYRAG	5 cut(s)	47, 1884, 2356, 2810, 3074
SmoI	CTYRAG	5 cut(s)	47, 1884, 2356, 2810, 3074
SphI	GCATGC	1 cut(s)	3102
SspI	AATATT	4 cut(s)	1783, 2304, 2365, 2822
SspMI	CTAG	2 cut(s)	1332, 2039
SstI	GAGCTC	1 cut(s)	33
StyI	CCWWGG	1 cut(s)	588
TaaI	ACNGT	7 cut(s)	1219, 1954, 2183, 2430, 2514, 2759, 2917
TaiI	ACGT	7 cut(s)	120, 357, 1120, 1363, 2463, 2505, 2617
TatI	WGTACW	5 cut(s)	1013, 1534, 2400, 2653, 2759
TauI	GCSGC	5 cut(s)	12, 175, 231, 279, 2038
TscAI	CASTG	2 cut(s)	19, 3180
TseFI	GTSAC	5 cut(s)	2201, 2456, 2917, 3012, 3171
Tsp45I	GTSAC	5 cut(s)	2201, 2456, 2917, 3012, 3171
TspDTI	ATGAA	4 cut(s)	652, 891, 1341, 1752
TspGWI	ACGGA	2 cut(s)	850, 2036
TspRI	CASTG	2 cut(s)	19, 3180
Tth111I	GACNNNGTC	1 cut(s)	3010
Vha464I	CTTAAG	1 cut(s)	2356
VneI	GTGCAC	1 cut(s)	1312
VpaK11BI	GGWCC	3 cut(s)	2330, 2746, 2775
XapI	RAATTY	4 cut(s)	644, 1290, 1592, 2533
XceI	RCATGY	3 cut(s)	2264, 2660, 3102
XhoI	CTCGAG	1 cut(s)	1884
XmiI	GTMKAC	3 cut(s)	357, 1473, 2516
XmnI	GAANNNNTTC	2 cut(s)	2561, 2792
XspI	CTAG	2 cut(s)	1332, 2039
Zsp2I	ATGCAT	1 cut(s)	1149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.