Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0003765

Physical Location & Seq

Genomic Coordinates Forward (+)

18779563 .. 18783080

Gene Structure 3518 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g20760.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGCATAATTCGATTAATGAAGGTGGTATTGAATTTAGTGTCAAGTATATAGACCAATGGGTTTTCCTGGCCATTCGAAATGGAGGGTCAAAATGTTCCCTTAGAGTTAAAAAACTCAAACAAAGCATTGGACCAGTAGGTGATGCTCATCGATTGATAGCACTTAATATGACCTGTTTGGTTATGCCTGATTACCTTGCTATATATTTTCTATTTACTTTTTATAGGGAAAGAGAGGAGGAGGATGGTGACGTACAAGACCTAGTTATGTCATTTTCTGGTATAGTTGAACACCCCAACAAACACGCACATCGATCATGTTCTTCTGTAGGTCTACTATATTATCTTGCTTTTCTCATTTGTCAGTTTGTGTTACTGTGTGGGCATTTTCTACACTTACTGCCTTCTTGGCTAATAAGAAAATGTAGCGTTCTTTCTGAAAGAATCTCTTTTTACTTTGTTTATAATAAGGCAATCCATTTCCTTTGTGCCACACGACATATTCTCTCCCCATTCTTTTGGGGAAGGGGTGAGTTTGCAACTTTTCAGGTTCAACACCTGTTCGGTTGTGTGAGTAAATTTGCCTGCAATCATTCCGTCCTTTATGTGAACACGGCCGACATTTTTTGCTCCTATCATTTGTTCACGAAATTCAAGTGGACATGGATTGACGTTATGATGCACTTTCTTTACAGAACTGCTGCCTGGAACTATTTGTTGGATTCTGGTGTTCAATGGGGAGCAGGTGTCTTGCAGGGTGTGCGTGATGCTGCTGTGGAGTTACTGCACACTTTGGTAGCTGTGCATGCAGAGGTACTTAGTGCAAGCCATAGTATGAATTGGTACGTTGCCTGCTCCAATGAGCATGTAAATATCCTTTTTTTTTTTCTTTCTATATGTTATTTTCCAGTGGTTAGGACTTATGCATATATGCGGTTTCATATTCTTACAATTTCGACTTTCCAGGTATTCTCTGGTGCGAAGCCCTTATTGGACAAGACACTTGGCATTCTTGTTGAAGGTCTAATTGACACGTTTATCAGCCTGTTCCATGAATATGAATCGAAAGATCTTAGGTCACTTGATGCAAATGGTTTCTGTCAGCTAATGCTTGAGGTAAAAGATTTTTGCAGTATGAGCAACAATAAATGGCAATTGCACCACATTCCTTTGGGTGCACCTAATTTTGATAAGATATTAATGTATCCAACACGTTATGCATATAAAAAATGGAAAAATATTTTGACAACTTCCCTTGTAAAAATATATACATATATACATTGTGAAATAGAAAATTACAGAGTGTTCATTTCATATGATATCTCGTTGGGAGTGAGCAAGTCATTACCATCATTGATCATAATGCAGCTTGAATACTTCGAGACTGTATTAAATCCATATTTAACTGCGGGTGCAAGGGAGTCTTTGAAGTCCTTACATGGTGTACTTCTCGATAAAGCCACTGAGAATGTATCAGAAAATGTGGAGAATCCAGGGCATAATCGACGAGCAACACGTGGAAGTGAAGAGGCGGCTGATGATAGACAGGATGGGATGAGTGTGTCACCTGATGACCTCATTGTAAGAAACCTTAATTCTCTAGTGATTTCTTCTTGTACAATGTTTAAAACACAATGCCAATGGATAGTAAATAGGATGAAAGAAATCTTTACCACGTCAATTGGTTGTCATGTTAAACCTCGTACTAAAGTTCTATGTTCCCGGTCTTTTTCTTATTTGCAAATAACTCGAAACTCTGAATTACTTCAAGCAGAGCTTGAGAGGACTCACATCAACACGGCATGTTTTGTGGAGTCAATTCCGTTAGACTCAGTACCTGAATCAGCTAAACGCGCTTATGCTTCGTTCAGGGGACCGCTAGATTCTCCGAGCAGAAACTACAGAGGCAACACTGGATCCCCAAGCTACTCACGGAATAGTTTACCATACGTGCTAGTGTTGTACTGTGATTACTCAGCTGAAAGCATATTCTTTTTATTGTATAAGCCCTCATTGAGCTTGTCTTGTTCTTTATTTTTACCTGACACTGTCAAGCACGACGTTATGGTTTTACACTTTTTTTTTTTTTTTTGGTATAAAAGCAATATTGGAGGAGAGAGGAATCTGAATACAGGATCTCGAGTGCAAAGGGTAAACATTCTTAACCGGATGCTCCAATGGCCCGTTTGGAAATGTTTCTCCAAAAGGCAGTTATGTTCAAAAGTGTTTTGTAATTCATTTTTTCATTATAATTGGGCTCTTTTGAAAATGAAGCGTGCTTCTCTGACAATGAAGCGGTTTTGGTTAGTTATACATCAAGAGTTCATTATCCCTCACAAATTACCAAAAAGCGCTTTTAACAATTTTAAGACTACTTTTAGACTGAATTACAACACATACATGTACATAAACTCTGTTAACAAGCCGAAGTATCTCATAAACAATACTTGCACTCTGATAAAAACACAAGTTATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0001927 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0007154 GO:0008037 GO:0008150 GO:0009506 GO:0009856 GO:0009875 GO:0009987 GO:0016020 GO:0016043 GO:0016192 GO:0022406 GO:0022414 GO:0022607 GO:0030054 GO:0031982 GO:0032501 GO:0032940 GO:0032991 GO:0034622 GO:0043226 GO:0043227 GO:0043230 GO:0043933 GO:0044085 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0046903 GO:0048278 GO:0048544 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051704 GO:0055044 GO:0060321 GO:0065003 GO:0070062 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056 GO:1903561

KEGG Pathways

Metabolic & Signaling

ko04014 map04014

Pfam Domains

Protein Families

Sec5

Protein Analysis

826

Amino Acids

95.44

Weight (kDa)

9.01

Isoelectric Point (pI)

43.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21170 AT1G21170 AT1G76850
fragaria_vesca	FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280
malus_domestica	MD02G1241200.v1.1 MD02G1241400.v1.1 MD07G1075500.v1.1
prunus_persica	Prupe.8G058700_v2.0.a1 Prupe.8G058700_v2.0.a1
pyrus_communis	pycom02g20640 pycom02g20660 pycom02g20670 pycom02g20680 pycom02g20750 pycom02g20760 pycom07g05950
rosa_chinensis	RchiOBHm_Chr1g0332001
rosa_laevigata	RLG00000029699
rosa_multiflora	Rmu_co8474765.1_g000001 Rmu_sc0003358.1_g000014
rosa_roxburghii	Rroxscaffold_4G00318510
rosa_rugosa	Rorug01G0097700
rosa_samantha	Rh1AG121600 Rh1BG093100 Rh1CG116400 Rh1DG127300
rosa_wichuraiana	Rw1G009920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	465, 2250
AarI	CACCTGC	1 cut(s)	734
Acc36I	ACCTGC	1 cut(s)	734
AccI	GTMKAC	1 cut(s)	334
AccII	CGCG	1 cut(s)	1854
AciI	CCGC	5 cut(s)	934, 1409, 1532, 1877, 2296
AclWI	GGATC	3 cut(s)	1911, 1924, 2143
AcoI	YGGCCR	2 cut(s)	69, 615
AcsI	RAATTY	3 cut(s)	32, 578, 650
AcvI	CACGTG	1 cut(s)	1517
AfaI	GTAC	9 cut(s)	255, 816, 845, 1446, 1618, 1705, 1836, 1964, 2405
AfeI	AGCGCT	1 cut(s)	2353
AflIII	ACRYGT	4 cut(s)	1032, 1211, 1514, 2400
AjiI	CACGTC	1 cut(s)	1677
AjnI	CCWGG	4 cut(s)	66, 704, 963, 1492
AjuI	GAANNNNNNNTTGG	4 cut(s)	701, 733, 974, 1006
AluBI	AGCT	8 cut(s)	800, 1105, 1369, 1777, 1847, 1926, 1979, 2019
AluI	AGCT	8 cut(s)	800, 1105, 1369, 1777, 1847, 1926, 1979, 2019
Alw21I	GWGCWC	1 cut(s)	1180
Alw26I	GTCTC	1 cut(s)	1376
Alw44I	GTGCAC	1 cut(s)	1176
AlwI	GGATC	3 cut(s)	1911, 1924, 2143
AlwNI	CAGNNNCTG	1 cut(s)	1838
Ama87I	CYCGRG	1 cut(s)	2139
Aor51HI	AGCGCT	1 cut(s)	2353
AoxI	GGCC	3 cut(s)	69, 615, 2180
ApaLI	GTGCAC	1 cut(s)	1176
ApeKI	GCWGC	3 cut(s)	701, 770, 1366
ApoI	RAATTY	3 cut(s)	32, 578, 650
AseI	ATTAAT	2 cut(s)	15, 1199
Asp700I	GAANNNNTTC	2 cut(s)	1764, 2195
AspLEI	GCGC	2 cut(s)	1856, 2354
AspS9I	GGNCC	3 cut(s)	131, 1874, 2181
AsuC2I	CCSGG	1 cut(s)	1723
AsuHPI	GGTGA	4 cut(s)	152, 260, 542, 1557
AsuII	TTCGAA	1 cut(s)	76
AvaI	CYCGRG	1 cut(s)	2139
AvaII	GGWCC	2 cut(s)	131, 1874
BaeGI	GKGCMC	1 cut(s)	1180
BalI	TGGCCA	1 cut(s)	71
BamHI	GGATCC	1 cut(s)	1916
BanII	GRGCYC	1 cut(s)	2260
BbrPI	CACGTG	1 cut(s)	1517
Bbv12I	GWGCWC	1 cut(s)	1180
BbvI	GCAGC	3 cut(s)	688, 757, 1378
BccI	CCATC	3 cut(s)	239, 1357, 1544
BceAI	ACGGC	2 cut(s)	630, 1815
BcgI	CGANNNNNNTGC	2 cut(s)	1730, 1764
BciT130I	CCWGG	4 cut(s)	68, 706, 965, 1494
BciVI	GTATCC	1 cut(s)	1215
BclI	TGATCA	1 cut(s)	1356
BcnI	CCSGG	1 cut(s)	1723
BcoDI	GTCTC	1 cut(s)	1376
BfaI	CTAG	4 cut(s)	263, 1601, 1880, 1955
BfmI	CTRYAG	2 cut(s)	327, 1900
BfoI	RGCGCY	1 cut(s)	2355
BfuAI	ACCTGC	1 cut(s)	734
BfuI	GTATCC	1 cut(s)	1215
BglI	GCCNNNNNGGC	1 cut(s)	409
BglII	AGATCT	1 cut(s)	1069
BisI	GCNGC	4 cut(s)	702, 771, 1367, 1533
BlsI	GCNGC	4 cut(s)	703, 772, 1368, 1534
Bme1390I	CCNGG	5 cut(s)	68, 706, 965, 1494, 1723
Bme18I	GGWCC	2 cut(s)	131, 1874
BmeT110I	CYCGRG	1 cut(s)	2139
BmgBI	CACGTC	1 cut(s)	1677
BmgT120I	GGNCC	3 cut(s)	131, 1874, 2181
BmiI	GGNNCC	2 cut(s)	1875, 1918
BmrFI	CCNGG	5 cut(s)	68, 706, 965, 1494, 1723
BmsI	GCATC	5 cut(s)	133, 669, 757, 1075, 2160
Bpu14I	TTCGAA	1 cut(s)	76
BpuEI	CTTGAG	2 cut(s)	1133, 1799
BpuMI	CCSGG	1 cut(s)	1723
Bsa29I	ATCGAT	2 cut(s)	151, 313
BsaAI	YACGTR	2 cut(s)	1517, 1951
BsaBI	GATNNNNATC	1 cut(s)	147
BsaJI	CCNNGG	1 cut(s)	1493
BsaWI	WCCGGW	1 cut(s)	2166
BsaXI	ACNNNNNCTCC	2 cut(s)	732, 762
Bse1I	ACTGG	3 cut(s)	134, 908, 1918
Bse8I	GATNNNNATC	1 cut(s)	147
BseBI	CCWGG	4 cut(s)	68, 706, 965, 1494
BseCI	ATCGAT	2 cut(s)	151, 313
BseDI	CCNNGG	1 cut(s)	1493
BseGI	GGATG	5 cut(s)	250, 1555, 1560, 1662, 2175
BseJI	GATNNNNATC	1 cut(s)	147
BseMII	CTCAG	3 cut(s)	1455, 1845, 1989
BseNI	ACTGG	3 cut(s)	134, 908, 1918
BseRI	GAGGAG	3 cut(s)	251, 254, 2127
BseSI	GKGCMC	1 cut(s)	1180
BseX3I	CGGCCG	1 cut(s)	615
BseXI	GCAGC	3 cut(s)	688, 757, 1378
BsgI	GTGCAG	1 cut(s)	770
Bsh1236I	CGCG	1 cut(s)	1854
Bsh1285I	CGRYCG	1 cut(s)	618
BshFI	GGCC	3 cut(s)	71, 617, 2182
BshVI	ATCGAT	2 cut(s)	151, 313
BsiEI	CGRYCG	1 cut(s)	618
BsiHKAI	GWGCWC	1 cut(s)	1180
BsiHKCI	CYCGRG	1 cut(s)	2139
BsiSI	CCGG	2 cut(s)	1723, 2167
BslFI	GGGAC	1 cut(s)	1887
BsmAI	GTCTC	1 cut(s)	1376
BsmFI	GGGAC	1 cut(s)	1887
BsmI	GAATGC	1 cut(s)	1008
BsnI	GGCC	3 cut(s)	71, 617, 2182
BsoBI	CYCGRG	1 cut(s)	2139
Bsp119I	TTCGAA	1 cut(s)	76
Bsp1286I	GDGCHC	2 cut(s)	1180, 2260
Bsp1407I	TGTACA	2 cut(s)	1616, 2403
Bsp143I	GATC	5 cut(s)	314, 1069, 1356, 1916, 2135
BspACI	CCGC	5 cut(s)	934, 1409, 1532, 1877, 2296
BspANI	GGCC	3 cut(s)	71, 617, 2182
BspCNI	CTCAG	3 cut(s)	1456, 1844, 1988
BspDI	ATCGAT	2 cut(s)	151, 313
BspFNI	CGCG	1 cut(s)	1854
BspLI	GGNNCC	2 cut(s)	1875, 1918
BspMI	ACCTGC	1 cut(s)	734
BspPI	GGATC	3 cut(s)	1911, 1924, 2143
BspT104I	TTCGAA	1 cut(s)	76
BsrGI	TGTACA	2 cut(s)	1616, 2403
BsrI	ACTGG	3 cut(s)	134, 908, 1918
BssECI	CCNNGG	1 cut(s)	1493
BssMI	GATC	5 cut(s)	314, 1069, 1356, 1916, 2135
Bst2UI	CCWGG	4 cut(s)	68, 706, 965, 1494
Bst4CI	ACNGT	4 cut(s)	378, 1387, 1967, 2050
Bst6I	CTCTTC	1 cut(s)	1521
BstAPI	GCANNNNNTGC	1 cut(s)	760
BstAUI	TGTACA	2 cut(s)	1616, 2403
BstBAI	YACGTR	2 cut(s)	1517, 1951
BstBI	TTCGAA	1 cut(s)	76
BstC8I	GCNNGC	5 cut(s)	586, 807, 826, 853, 2277
BstDEI	CTNAG	6 cut(s)	101, 818, 1073, 1464, 1831, 1975
BstF5I	GGATG	5 cut(s)	250, 1555, 1560, 1662, 2175
BstFNI	CGCG	1 cut(s)	1854
BstH2I	RGCGCY	1 cut(s)	2355
BstHHI	GCGC	2 cut(s)	1856, 2354
BstKTI	GATC	5 cut(s)	317, 1072, 1359, 1919, 2138
BstMAI	GTCTC	1 cut(s)	1376
BstMBI	GATC	5 cut(s)	314, 1069, 1356, 1916, 2135
BstMCI	CGRYCG	1 cut(s)	618
BstMWI	GCNNNNNNNGC	6 cut(s)	409, 760, 806, 1137, 1853, 2179
BstNI	CCWGG	4 cut(s)	68, 706, 965, 1494
BstNSI	RCATGY	4 cut(s)	809, 869, 1806, 2404
BstSCI	CCNGG	5 cut(s)	66, 704, 963, 1492, 1721
BstSFI	CTRYAG	2 cut(s)	327, 1900
BstSLI	GKGCMC	1 cut(s)	1180
BstUI	CGCG	1 cut(s)	1854
BstV1I	GCAGC	3 cut(s)	688, 757, 1378
BstX2I	RGATCY	3 cut(s)	1069, 1916, 2135
BstXI	CCANNNNNNTGG	1 cut(s)	519
BstYI	RGATCY	3 cut(s)	1069, 1916, 2135
BstZI	CGGCCG	1 cut(s)	615
Bsu15I	ATCGAT	2 cut(s)	151, 313
BsuI	GTATCC	1 cut(s)	1215
BsuRI	GGCC	3 cut(s)	71, 617, 2182
BsuTUI	ATCGAT	2 cut(s)	151, 313
BtrI	CACGTC	1 cut(s)	1677
BtsCI	GGATG	5 cut(s)	250, 1555, 1560, 1662, 2175
BtsIMutI	CAGTG	4 cut(s)	915, 1461, 1911, 2046
BveI	ACCTGC	1 cut(s)	734
Cac8I	GCNNGC	5 cut(s)	586, 807, 826, 853, 2277
CaiI	CAGNNNCTG	1 cut(s)	1838
CfoI	GCGC	2 cut(s)	1856, 2354
Cfr13I	GGNCC	3 cut(s)	131, 1874, 2181
ClaI	ATCGAT	2 cut(s)	151, 313
Csp6I	GTAC	9 cut(s)	254, 815, 844, 1445, 1617, 1704, 1835, 1963, 2404
CspCI	CAANNNNNGTGG	2 cut(s)	1663, 1698
CviAII	CATG	9 cut(s)	318, 663, 806, 866, 1052, 1439, 1691, 1803, 2401
CviQI	GTAC	9 cut(s)	254, 815, 844, 1445, 1617, 1704, 1835, 1963, 2404
DdeI	CTNAG	6 cut(s)	101, 818, 1073, 1464, 1831, 1975
DpnI	GATC	5 cut(s)	316, 1071, 1358, 1918, 2137
DpnII	GATC	5 cut(s)	314, 1069, 1356, 1916, 2135
DraI	TTTAAA	1 cut(s)	1627
EaeI	YGGCCR	2 cut(s)	69, 615
EagI	CGGCCG	1 cut(s)	615
Eam1104I	CTCTTC	1 cut(s)	1521
EarI	CTCTTC	1 cut(s)	1521
EclXI	CGGCCG	1 cut(s)	615
Eco24I	GRGCYC	1 cut(s)	2260
Eco32I	GATATC	1 cut(s)	1321
Eco47I	GGWCC	2 cut(s)	131, 1874
Eco47III	AGCGCT	1 cut(s)	2353
Eco52I	CGGCCG	1 cut(s)	615
Eco72I	CACGTG	1 cut(s)	1517
Eco88I	CYCGRG	1 cut(s)	2139
EcoRII	CCWGG	4 cut(s)	66, 704, 963, 1492
EcoRV	GATATC	1 cut(s)	1321
EcoT22I	ATGCAT	3 cut(s)	6, 928, 1222
EcoT38I	GRGCYC	1 cut(s)	2260
FaeI	CATG	9 cut(s)	321, 666, 809, 869, 1055, 1442, 1694, 1806, 2404
FalI	AAGNNNNNCTT	6 cut(s)	433, 465, 1408, 1440, 1761, 1793
FaqI	GGGAC	1 cut(s)	1887
FatI	CATG	9 cut(s)	317, 662, 805, 865, 1051, 1438, 1690, 1802, 2400
FauI	CCCGC	1 cut(s)	1402
FauNDI	CATATG	1 cut(s)	1315
FbaI	TGATCA	1 cut(s)	1356
FblI	GTMKAC	1 cut(s)	334
Fnu4HI	GCNGC	4 cut(s)	702, 771, 1367, 1533
FokI	GGATG	5 cut(s)	257, 1562, 1567, 1669, 2182
FriOI	GRGCYC	1 cut(s)	2260
Fsp4HI	GCNGC	4 cut(s)	702, 771, 1367, 1533
FspBI	CTAG	4 cut(s)	263, 1601, 1880, 1955
GlaI	GCGC	2 cut(s)	1855, 2353
GluI	GCNGC	4 cut(s)	702, 771, 1367, 1533
HaeII	RGCGCY	1 cut(s)	2355
HaeIII	GGCC	3 cut(s)	71, 617, 2182
HapII	CCGG	2 cut(s)	1723, 2167
HhaI	GCGC	2 cut(s)	1856, 2354
Hin1II	CATG	9 cut(s)	321, 666, 809, 869, 1055, 1442, 1694, 1806, 2404
Hin6I	GCGC	2 cut(s)	1854, 2352
HinP1I	GCGC	2 cut(s)	1854, 2352
HincII	GTYRAC	1 cut(s)	2419
HindII	GTYRAC	1 cut(s)	2419
HpaI	GTTAAC	1 cut(s)	2419
HpaII	CCGG	2 cut(s)	1723, 2167
HphI	GGTGA	4 cut(s)	152, 260, 542, 1557
Hpy166II	GTNNAC	9 cut(s)	335, 610, 645, 660, 1178, 1445, 1943, 2155, 2419
Hpy188I	TCNGA	7 cut(s)	439, 1477, 1759, 1890, 2127, 2286, 2457
Hpy188III	TCNNGA	5 cut(s)	646, 1381, 1451, 2139, 2318
Hpy8I	GTNNAC	9 cut(s)	335, 610, 645, 660, 1178, 1445, 1943, 2155, 2419
Hpy99I	CGWCG	2 cut(s)	1509, 2063
HpyAV	CCTTC	4 cut(s)	14, 414, 519, 1013
HpyCH4III	ACNGT	4 cut(s)	378, 1387, 1967, 2050
HpyCH4IV	ACGT	9 cut(s)	252, 672, 846, 1034, 1213, 1516, 1676, 1950, 2061
HpyF10VI	GCNNNNNNNGC	6 cut(s)	409, 760, 806, 1137, 1853, 2179
HpyF3I	CTNAG	6 cut(s)	101, 818, 1073, 1464, 1831, 1975
HpySE526I	ACGT	9 cut(s)	252, 672, 846, 1034, 1213, 1516, 1676, 1950, 2061
Hsp92II	CATG	9 cut(s)	321, 666, 809, 869, 1055, 1442, 1694, 1806, 2404
HspAI	GCGC	2 cut(s)	1854, 2352
Ksp22I	TGATCA	1 cut(s)	1356
KspAI	GTTAAC	1 cut(s)	2419
Kzo9I	GATC	5 cut(s)	314, 1069, 1356, 1916, 2135
LmnI	GCTCC	4 cut(s)	635, 740, 860, 2178
Lsp1109I	GCAGC	3 cut(s)	688, 757, 1378
LweI	GCATC	5 cut(s)	133, 669, 757, 1075, 2160
MaeI	CTAG	4 cut(s)	263, 1601, 1880, 1955
MaeII	ACGT	9 cut(s)	252, 672, 846, 1034, 1213, 1516, 1676, 1950, 2061
MaeIII	GTNAC	5 cut(s)	248, 372, 780, 1077, 1563
MalI	GATC	5 cut(s)	316, 1071, 1358, 1918, 2137
MboI	GATC	5 cut(s)	314, 1069, 1356, 1916, 2135
MboII	GAAGA	3 cut(s)	315, 1538, 1602
MfeI	CAATTG	2 cut(s)	1154, 1680
MflI	RGATCY	3 cut(s)	1069, 1916, 2135
MhlI	GDGCHC	2 cut(s)	1180, 2260
MlsI	TGGCCA	1 cut(s)	71
MluNI	TGGCCA	1 cut(s)	71
MlyI	GAGTC	4 cut(s)	1430, 1780, 1823, 1823
MmeI	TCCRAC	2 cut(s)	699, 1232
Mox20I	TGGCCA	1 cut(s)	71
Mph1103I	ATGCAT	3 cut(s)	6, 928, 1222
MroXI	GAANNNNTTC	2 cut(s)	1764, 2195
MscI	TGGCCA	1 cut(s)	71
MslI	CAYNNNNRTG	2 cut(s)	1056, 2399
Msp20I	TGGCCA	1 cut(s)	71
MspA1I	CMGCKG	1 cut(s)	1979
MspI	CCGG	2 cut(s)	1723, 2167
MspR9I	CCNGG	5 cut(s)	68, 706, 965, 1494, 1723
MunI	CAATTG	2 cut(s)	1154, 1680
Mva1269I	GAATGC	1 cut(s)	1008
MvaI	CCWGG	4 cut(s)	68, 706, 965, 1494
MvnI	CGCG	1 cut(s)	1854
MwoI	GCNNNNNNNGC	6 cut(s)	409, 760, 806, 1137, 1853, 2179
NciI	CCSGG	1 cut(s)	1723
NdeI	CATATG	1 cut(s)	1315
NdeII	GATC	5 cut(s)	314, 1069, 1356, 1916, 2135
NlaIII	CATG	9 cut(s)	321, 666, 809, 869, 1055, 1442, 1694, 1806, 2404
NlaIV	GGNNCC	2 cut(s)	1875, 1918
NmuCI	GTSAC	3 cut(s)	248, 1077, 1563
NsiI	ATGCAT	3 cut(s)	6, 928, 1222
NspI	RCATGY	4 cut(s)	809, 869, 1806, 2404
NspV	TTCGAA	1 cut(s)	76
PaeI	GCATGC	1 cut(s)	809
PaeR7I	CTCGAG	1 cut(s)	2139
PaqCI	CACCTGC	1 cut(s)	734
PciI	ACATGT	1 cut(s)	2400
PcsI	WCGNNNNNNNCGW	1 cut(s)	1513
PctI	GAATGC	1 cut(s)	1008
PdmI	GAANNNNTTC	2 cut(s)	1764, 2195
PfeI	GAWTC	7 cut(s)	444, 722, 1061, 1489, 1841, 1883, 2122
PflFI	GACNNNGTC	1 cut(s)	2048
PkrI	GCNGC	4 cut(s)	703, 772, 1368, 1534
PleI	GAGTC	4 cut(s)	1429, 1780, 1822, 1823
PmaCI	CACGTG	1 cut(s)	1517
PmlI	CACGTG	1 cut(s)	1517
PpsI	GAGTC	4 cut(s)	1429, 1780, 1822, 1823
Ppu21I	YACGTR	2 cut(s)	1517, 1951
PscI	ACATGT	1 cut(s)	2400
PshBI	ATTAAT	2 cut(s)	15, 1199
PsiI	TTATAA	2 cut(s)	465, 2250
Psp6I	CCWGG	4 cut(s)	66, 704, 963, 1492
PspCI	CACGTG	1 cut(s)	1517
PspGI	CCWGG	4 cut(s)	66, 704, 963, 1492
PspN4I	GGNNCC	2 cut(s)	1875, 1918
PspPI	GGNCC	3 cut(s)	131, 1874, 2181
PstNI	CAGNNNCTG	1 cut(s)	1838
PsuI	RGATCY	3 cut(s)	1069, 1916, 2135
PsyI	GACNNNGTC	1 cut(s)	2048
PvuII	CAGCTG	1 cut(s)	1979
RsaI	GTAC	9 cut(s)	255, 816, 845, 1446, 1618, 1705, 1836, 1964, 2405
RsaNI	GTAC	9 cut(s)	254, 815, 844, 1445, 1617, 1704, 1835, 1963, 2404
RseI	CAYNNNNRTG	2 cut(s)	1056, 2399
SatI	GCNGC	4 cut(s)	702, 771, 1367, 1533
Sau3AI	GATC	5 cut(s)	314, 1069, 1356, 1916, 2135
Sau96I	GGNCC	3 cut(s)	131, 1874, 2181
SchI	GAGTC	4 cut(s)	1430, 1780, 1823, 1823
ScrFI	CCNGG	5 cut(s)	68, 706, 965, 1494, 1723
SduI	GDGCHC	2 cut(s)	1180, 2260
SfaNI	GCATC	5 cut(s)	133, 669, 757, 1075, 2160
SfcI	CTRYAG	2 cut(s)	327, 1900
Sfr274I	CTCGAG	1 cut(s)	2139
SfuI	TTCGAA	1 cut(s)	76
SinI	GGWCC	2 cut(s)	131, 1874
SlaI	CTCGAG	1 cut(s)	2139
SmiMI	CAYNNNNRTG	2 cut(s)	1056, 2399
SmlI	CTYRAG	3 cut(s)	1112, 1778, 2139
SmoI	CTYRAG	3 cut(s)	1112, 1778, 2139
SphI	GCATGC	1 cut(s)	809
SsiI	CCGC	5 cut(s)	934, 1409, 1532, 1877, 2296
SspI	AATATT	2 cut(s)	1240, 2107
SspMI	CTAG	4 cut(s)	263, 1601, 1880, 1955
StyD4I	CCNGG	5 cut(s)	66, 704, 963, 1492, 1721
TaaI	ACNGT	4 cut(s)	378, 1387, 1967, 2050
TaiI	ACGT	9 cut(s)	255, 675, 849, 1037, 1216, 1519, 1679, 1953, 2064
TatI	WGTACW	4 cut(s)	1444, 1616, 1962, 2403
TauI	GCSGC	1 cut(s)	1535
TfiI	GAWTC	7 cut(s)	444, 722, 1061, 1489, 1841, 1883, 2122
TscAI	CASTG	4 cut(s)	915, 1468, 1918, 2053
TseFI	GTSAC	3 cut(s)	248, 1077, 1563
TseI	GCWGC	3 cut(s)	701, 770, 1366
Tsp45I	GTSAC	3 cut(s)	248, 1077, 1563
TspGWI	ACGGA	3 cut(s)	586, 1812, 1948
TspRI	CASTG	4 cut(s)	915, 1468, 1918, 2053
Tth111I	GACNNNGTC	1 cut(s)	2048
VneI	GTGCAC	1 cut(s)	1176
VpaK11BI	GGWCC	2 cut(s)	131, 1874
VspI	ATTAAT	2 cut(s)	15, 1199
XapI	RAATTY	3 cut(s)	32, 578, 650
XceI	RCATGY	4 cut(s)	809, 869, 1806, 2404
XcmI	CCANNNNNNNNNTGG	1 cut(s)	971
XhoI	CTCGAG	1 cut(s)	2139
XmiI	GTMKAC	1 cut(s)	334
XmnI	GAANNNNTTC	2 cut(s)	1764, 2195
XspI	CTAG	4 cut(s)	263, 1601, 1880, 1955
Zsp2I	ATGCAT	3 cut(s)	6, 928, 1222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.