pycom07g05950

exocyst complex component

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
5261082 .. 5270972
9891 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g05950.10

Sequence Viewer

Length: 1641 bp
ATGCTACAGAGGTTCCGAACGCTATTCAACTTGCCCAGTACAATTCGTGGTAGCATAAGCAAGGGAGAATATGACTTGGCAGTTAGGGAATACAAGAAGGCCAAATCAATTGCTCTGCCTTCTCATGTGGGAATACTGAAACGGGTACTTGAAGAGGTTGAGAAAGTGATGCATGAGTTTAAAGGGATGCTTTACAAGTCTATGGAAGATCCGCAAATAGATTTAACAAATGTTGAAAACACAGTGAGGCTGTTATTGGAGCTGGAACCTGAGTCAGATCCTGTATGGCACTATTTAAATATACAGAATAACAGAATTCGAGGTTTGCTTGAGAAATGCACATTGGATCATGAAGCTAGGATTGAGACTTTACATAATGAGTTACGTGAAAGGGCTCTGTCTGATGCAAGATGGAGACAGATTCAAGAAGATATAAATCAATCTTCAGATGTCAACTATTCTCTTGGGGACAACCACCTTCCAGTAGATTCTCTGCCAGTGGACTTGACAGGTGAAGAAGTTGATGCTCTTAGAGGGAGGTATATTCGCAGATTAACTGCTGTACTTATCCATCACGTACCAGCTTTCTGGAAAGTGGCACTTTCTGTTTTCAGTGGGAAATTCGCCAAGTCGTCCCAAGTTTCTACTGAATCAAATGCTAACACTCCAGCAAATAAAGCTGAGGATAAAGTTGGAGATGGGAAGTACTCCACTCATTCCCTTGATGAAGTTGCTGGAATGATACGGAATACCATATCTGCATATGAAGCCAAAGTTTGCAATACATTTCGCGATCTTGAAGAATCAAACATTCTGCAACCGTATATGAGGAATGCCATAACAGAGATATCTAAAGCATGTGAAACTTTCCAAGCAAAAGAATCAGCTCCTTCTATTGCTGTAACTGCAACTCGAGCACTTCAGTCGGAAATTACTAAGATTTACATCCTAAGGCTCTGCTCATGGATGCGGGCATCAACTGCAGAGATTTCAAAAGATGAGACATGGGTTCCAGTATCAGTTCTTGAAAGGAATAAATCTCCCTATACAATCTCTTTCTTGCCTCTAGCATTCCGTAATGTTATGACCTCAGCAATGGATCAAATCAAGTTGATGATTCAATCTTTAAGAACTGAGGCTACGAAGTCAGAGGATATGTTCATGCAACTCCAAGAAACACAAGAATCTGTCAGACTTGCATTTTTGAACTGCATGCTTGATTTTGCAGGTCATCTAGAGCGTGGTGGAAGTGAGCTTGCCGTAAACAAATCAAGCAAAGGAAGTTCACACGTACAAAATGGATATTCTCATACCCTAGCTGAAAAGTCTGATCTCCCAGGAAGTGTTGGTCCACATCAACAGTTGTTAATAGTCTTGAGTAATATTGGCTATTGCAGAGAAGAACTTTCTTATGAGTTGTACAACAATTACAAGCACATCTGGCTACAGTCTAGGGAAAGAGGAGAAGAGGATGGTGACATACAGGACCTAGTGGTGTCCTTTTCTGGCCTTGAAGAGAAGGTCCTTGAGCAATATACTTTTGCTAAGGCAAATTTGATCGATCAGAACTGCTGCCTGGAACTATTTGTTGGATTCTGGTGTTCAATGGGGAGCAGCACCTGCTGTAAAAGGTGTGCGTGA

Protein Analysis

547

Amino Acids

61.88

Weight (kDa)

5.72

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1628
Acc36I ACCTGC 2 cut(s) 1217, 1628
AccII CGCG 1 cut(s) 792
AciI CCGC 2 cut(s) 212, 970
AclWI GGATC 4 cut(s) 203, 272, 354, 1107
AcsI RAATTY 3 cut(s) 315, 620, 1552
AcuI CTGAAG 2 cut(s) 429, 905
AfaI GTAC 7 cut(s) 40, 147, 564, 579, 707, 1293, 1421
AflIII ACRYGT 1 cut(s) 1288
AjnI CCWGG 2 cut(s) 1336, 1575
AjuI GAANNNNNNNTTGG 4 cut(s) 326, 358, 1572, 1604
AluBI AGCT 7 cut(s) 262, 356, 584, 680, 887, 1255, 1319
AluI AGCT 7 cut(s) 262, 356, 584, 680, 887, 1255, 1319
Alw21I GWGCWC 1 cut(s) 919
Alw26I GTCTC 3 cut(s) 359, 409, 995
AlwI GGATC 4 cut(s) 203, 272, 354, 1107
AlwNI CAGNNNCTG 2 cut(s) 281, 1620
Ama87I CYCGRG 1 cut(s) 912
AoxI GGCC 2 cut(s) 99, 1507
ApeKI GCWGC 2 cut(s) 1572, 1614
ApoI RAATTY 3 cut(s) 315, 620, 1552
AspS9I GGNCC 3 cut(s) 1349, 1486, 1522
AsuHPI GGTGA 2 cut(s) 524, 1487
AvaI CYCGRG 1 cut(s) 912
AvaII GGWCC 3 cut(s) 1349, 1486, 1522
AxyI CCTNAGG 1 cut(s) 950
BanII GRGCYC 1 cut(s) 397
Bbv12I GWGCWC 1 cut(s) 919
BbvCI CCTCAGC 2 cut(s) 681, 1090
BbvI GCAGC 2 cut(s) 1559, 1626
BccI CCATC 4 cut(s) 405, 579, 692, 1466
BceAI ACGGC 1 cut(s) 1244
BcgI CGANNNNNNTGC 2 cut(s) 906, 940
BciT130I CCWGG 2 cut(s) 1338, 1577
BcoDI GTCTC 3 cut(s) 359, 409, 995
BfaI CTAG 6 cut(s) 357, 1067, 1235, 1316, 1452, 1490
BfmI CTRYAG 3 cut(s) 5, 981, 1445
BfuAI ACCTGC 2 cut(s) 1217, 1628
BisI GCNGC 2 cut(s) 1573, 1615
BlsI GCNGC 2 cut(s) 1574, 1616
BmcAI AGTACT 1 cut(s) 707
Bme1390I CCNGG 2 cut(s) 1338, 1577
Bme18I GGWCC 3 cut(s) 1349, 1486, 1522
BmeT110I CYCGRG 1 cut(s) 912
BmgT120I GGNCC 3 cut(s) 1349, 1486, 1522
BmiI GGNNCC 3 cut(s) 14, 267, 1011
BmrFI CCNGG 2 cut(s) 1338, 1577
BmrI ACTGGG 1 cut(s) 30
BmsI GCATC 6 cut(s) 159, 177, 394, 514, 957, 983
BmuI ACTGGG 1 cut(s) 30
BpmI CTGGAG 1 cut(s) 651
Bpu10I CCTNAGC 3 cut(s) 681, 1090, 1545
BpuEI CTTGAG 3 cut(s) 350, 1396, 1547
Bsa29I ATCGAT 1 cut(s) 1560
BsaAI YACGTR 3 cut(s) 386, 577, 1291
BsaBI GATNNNNATC 2 cut(s) 435, 944
BsaJI CCNNGG 1 cut(s) 1336
Bse1I ACTGG 4 cut(s) 36, 482, 497, 1013
Bse21I CCTNAGG 1 cut(s) 950
Bse3DI GCAATG 1 cut(s) 1101
Bse8I GATNNNNATC 2 cut(s) 435, 944
BseBI CCWGG 2 cut(s) 1338, 1577
BseCI ATCGAT 1 cut(s) 1560
BseDI CCNNGG 1 cut(s) 1336
BseGI GGATG 4 cut(s) 192, 945, 972, 1477
BseJI GATNNNNATC 2 cut(s) 435, 944
BseMI GCAATG 1 cut(s) 1101
BseMII CTCAG 4 cut(s) 261, 672, 1104, 1125
BseNI ACTGG 4 cut(s) 36, 482, 497, 1013
BseRI GAGGAG 1 cut(s) 1476
BseXI GCAGC 2 cut(s) 1559, 1626
Bsh1236I CGCG 1 cut(s) 792
BshFI GGCC 2 cut(s) 101, 1509
BshVI ATCGAT 1 cut(s) 1560
BsiHKAI GWGCWC 1 cut(s) 919
BsiHKCI CYCGRG 1 cut(s) 912
BslFI GGGAC 2 cut(s) 482, 619
BsmAI GTCTC 3 cut(s) 359, 409, 995
BsmFI GGGAC 2 cut(s) 482, 619
BsmI GAATGC 2 cut(s) 838, 1070
BsnI GGCC 2 cut(s) 101, 1509
BsoBI CYCGRG 1 cut(s) 912
Bsp1286I GDGCHC 2 cut(s) 397, 919
Bsp1407I TGTACA 1 cut(s) 1419
Bsp143I GATC 8 cut(s) 208, 277, 346, 793, 1099, 1330, 1557, 1561
Bsp68I TCGCGA 1 cut(s) 792
BspACI CCGC 2 cut(s) 212, 970
BspANI GGCC 2 cut(s) 101, 1509
BspCNI CTCAG 4 cut(s) 262, 673, 1103, 1126
BspDI ATCGAT 1 cut(s) 1560
BspFNI CGCG 1 cut(s) 792
BspHI TCATGA 1 cut(s) 349
BspLI GGNNCC 3 cut(s) 14, 267, 1011
BspMAI CTGCAG 1 cut(s) 985
BspMI ACCTGC 2 cut(s) 1217, 1628
BspPI GGATC 4 cut(s) 203, 272, 354, 1107
BsrDI GCAATG 1 cut(s) 1101
BsrGI TGTACA 1 cut(s) 1419
BsrI ACTGG 4 cut(s) 36, 482, 497, 1013
BssECI CCNNGG 1 cut(s) 1336
BssMI GATC 8 cut(s) 208, 277, 346, 793, 1099, 1330, 1557, 1561
Bst2UI CCWGG 2 cut(s) 1338, 1577
Bst4CI ACNGT 4 cut(s) 244, 822, 1362, 1449
Bst6I CTCTTC 3 cut(s) 147, 1461, 1509
BstAPI GCANNNNNTGC 2 cut(s) 980, 1620
BstAUI TGTACA 1 cut(s) 1419
BstBAI YACGTR 3 cut(s) 386, 577, 1291
BstC8I GCNNGC 3 cut(s) 972, 1214, 1257
BstDEI CTNAG 8 cut(s) 270, 530, 681, 936, 950, 1090, 1134, 1545
BstF5I GGATG 4 cut(s) 192, 945, 972, 1477
BstFNI CGCG 1 cut(s) 792
BstKTI GATC 8 cut(s) 211, 280, 349, 796, 1102, 1333, 1560, 1564
BstMAI GTCTC 3 cut(s) 359, 409, 995
BstMBI GATC 8 cut(s) 208, 277, 346, 793, 1099, 1330, 1557, 1561
BstMWI GCNNNNNNNGC 7 cut(s) 677, 767, 905, 914, 980, 1441, 1620
BstNI CCWGG 2 cut(s) 1338, 1577
BstNSI RCATGY 2 cut(s) 861, 1216
BstSCI CCNGG 2 cut(s) 1336, 1575
BstSFI CTRYAG 3 cut(s) 5, 981, 1445
BstUI CGCG 1 cut(s) 792
BstV1I GCAGC 2 cut(s) 1559, 1626
BstX2I RGATCY 2 cut(s) 208, 277
BstXI CCANNNNNNTGG 1 cut(s) 588
BstYI RGATCY 2 cut(s) 208, 277
Bsu15I ATCGAT 1 cut(s) 1560
Bsu36I CCTNAGG 1 cut(s) 950
BsuRI GGCC 2 cut(s) 101, 1509
BsuTUI ATCGAT 1 cut(s) 1560
BtsCI GGATG 4 cut(s) 192, 945, 972, 1477
BtsIMutI CAGTG 3 cut(s) 249, 504, 619
BtuMI TCGCGA 1 cut(s) 792
BveI ACCTGC 2 cut(s) 1217, 1628
Cac8I GCNNGC 3 cut(s) 972, 1214, 1257
CaiI CAGNNNCTG 2 cut(s) 281, 1620
CciI TCATGA 1 cut(s) 349
Cfr13I GGNCC 3 cut(s) 1349, 1486, 1522
ClaI ATCGAT 1 cut(s) 1560
Csp6I GTAC 7 cut(s) 39, 146, 563, 578, 706, 1292, 1420
CviAII CATG 8 cut(s) 125, 173, 350, 858, 963, 1005, 1162, 1213
CviQI GTAC 7 cut(s) 39, 146, 563, 578, 706, 1292, 1420
DdeI CTNAG 8 cut(s) 270, 530, 681, 936, 950, 1090, 1134, 1545
DpnI GATC 8 cut(s) 210, 279, 348, 795, 1101, 1332, 1559, 1563
DpnII GATC 8 cut(s) 208, 277, 346, 793, 1099, 1330, 1557, 1561
DraI TTTAAA 2 cut(s) 181, 297
Eam1104I CTCTTC 3 cut(s) 147, 1461, 1509
EarI CTCTTC 3 cut(s) 147, 1461, 1509
Eco24I GRGCYC 1 cut(s) 397
Eco32I GATATC 1 cut(s) 849
Eco47I GGWCC 3 cut(s) 1349, 1486, 1522
Eco57I CTGAAG 2 cut(s) 429, 905
Eco81I CCTNAGG 1 cut(s) 950
Eco88I CYCGRG 1 cut(s) 912
EcoO109I RGGNCCY 2 cut(s) 1486, 1522
EcoRI GAATTC 1 cut(s) 315
EcoRII CCWGG 2 cut(s) 1336, 1575
EcoRV GATATC 1 cut(s) 849
EcoT22I ATGCAT 1 cut(s) 174
EcoT38I GRGCYC 1 cut(s) 397
FaeI CATG 8 cut(s) 128, 176, 353, 861, 966, 1008, 1165, 1216
FalI AAGNNNNNCTT 4 cut(s) 174, 206, 585, 617
FaqI GGGAC 2 cut(s) 482, 619
FatI CATG 8 cut(s) 124, 172, 349, 857, 962, 1004, 1161, 1212
FauI CCCGC 1 cut(s) 963
FauNDI CATATG 1 cut(s) 763
Fnu4HI GCNGC 2 cut(s) 1573, 1615
FokI GGATG 4 cut(s) 199, 932, 979, 1484
FriOI GRGCYC 1 cut(s) 397
Fsp4HI GCNGC 2 cut(s) 1573, 1615
FspBI CTAG 6 cut(s) 357, 1067, 1235, 1316, 1452, 1490
GluI GCNGC 2 cut(s) 1573, 1615
GsuI CTGGAG 1 cut(s) 651
HaeIII GGCC 2 cut(s) 101, 1509
Hin1II CATG 8 cut(s) 128, 176, 353, 861, 966, 1008, 1165, 1216
HincII GTYRAC 1 cut(s) 454
HindII GTYRAC 1 cut(s) 454
HinfI GANTC 9 cut(s) 272, 421, 488, 650, 803, 881, 1117, 1184, 1593
HphI GGTGA 2 cut(s) 524, 1487
Hpy166II GTNNAC 5 cut(s) 454, 502, 1264, 1286, 1352
Hpy188I TCNGA 9 cut(s) 17, 277, 403, 448, 928, 1150, 1193, 1330, 1566
Hpy188III TCNNGA 8 cut(s) 350, 425, 589, 791, 797, 1025, 1235, 1375
Hpy8I GTNNAC 5 cut(s) 454, 502, 1264, 1286, 1352
HpyAV CCTTC 5 cut(s) 91, 129, 488, 900, 1513
HpyCH4III ACNGT 4 cut(s) 244, 822, 1362, 1449
HpyCH4IV ACGT 3 cut(s) 385, 576, 1290
HpyF10VI GCNNNNNNNGC 7 cut(s) 677, 767, 905, 914, 980, 1441, 1620
HpyF3I CTNAG 8 cut(s) 270, 530, 681, 936, 950, 1090, 1134, 1545
HpySE526I ACGT 3 cut(s) 385, 576, 1290
Hsp92II CATG 8 cut(s) 128, 176, 353, 861, 966, 1008, 1165, 1216
Kzo9I GATC 8 cut(s) 208, 277, 346, 793, 1099, 1330, 1557, 1561
LmnI GCTCC 3 cut(s) 259, 892, 1611
Lsp1109I GCAGC 2 cut(s) 1559, 1626
LweI GCATC 6 cut(s) 159, 177, 394, 514, 957, 983
MaeI CTAG 6 cut(s) 357, 1067, 1235, 1316, 1452, 1490
MaeII ACGT 3 cut(s) 385, 576, 1290
MaeIII GTNAC 3 cut(s) 381, 901, 1475
MalI GATC 8 cut(s) 210, 279, 348, 795, 1101, 1332, 1559, 1563
MboI GATC 8 cut(s) 208, 277, 346, 793, 1099, 1330, 1557, 1561
MboII GAAGA 9 cut(s) 164, 218, 435, 440, 527, 812, 1412, 1478, 1526
MfeI CAATTG 1 cut(s) 108
MflI RGATCY 2 cut(s) 208, 277
MhlI GDGCHC 2 cut(s) 397, 919
MluCI AATT 7 cut(s) 42, 108, 315, 620, 930, 1426, 1552
MlyI GAGTC 1 cut(s) 281
MmeI TCCRAC 3 cut(s) 673, 906, 1570
Mph1103I ATGCAT 1 cut(s) 174
MseI TTAA 6 cut(s) 180, 224, 296, 554, 1127, 1367
MspR9I CCNGG 2 cut(s) 1338, 1577
MunI CAATTG 1 cut(s) 108
Mva1269I GAATGC 2 cut(s) 838, 1070
MvaI CCWGG 2 cut(s) 1338, 1577
MvnI CGCG 1 cut(s) 792
MwoI GCNNNNNNNGC 7 cut(s) 677, 767, 905, 914, 980, 1441, 1620
NdeI CATATG 1 cut(s) 763
NdeII GATC 8 cut(s) 208, 277, 346, 793, 1099, 1330, 1557, 1561
NlaIII CATG 8 cut(s) 128, 176, 353, 861, 966, 1008, 1165, 1216
NlaIV GGNNCC 3 cut(s) 14, 267, 1011
NmuCI GTSAC 1 cut(s) 1475
NruI TCGCGA 1 cut(s) 792
NsiI ATGCAT 1 cut(s) 174
NspI RCATGY 2 cut(s) 861, 1216
PaeI GCATGC 1 cut(s) 1216
PaeR7I CTCGAG 1 cut(s) 912
PagI TCATGA 1 cut(s) 349
PaqCI CACCTGC 1 cut(s) 1628
PctI GAATGC 2 cut(s) 838, 1070
PfeI GAWTC 8 cut(s) 421, 488, 650, 803, 881, 1117, 1184, 1593
PkrI GCNGC 2 cut(s) 1574, 1616
PleI GAGTC 1 cut(s) 280
PpsI GAGTC 1 cut(s) 280
Ppu21I YACGTR 3 cut(s) 386, 577, 1291
PpuMI RGGWCCY 2 cut(s) 1486, 1522
Psp5II RGGWCCY 2 cut(s) 1486, 1522
Psp6I CCWGG 2 cut(s) 1336, 1575
PspGI CCWGG 2 cut(s) 1336, 1575
PspN4I GGNNCC 3 cut(s) 14, 267, 1011
PspPI GGNCC 3 cut(s) 1349, 1486, 1522
PspPPI RGGWCCY 2 cut(s) 1486, 1522
PspXI VCTCGAGB 1 cut(s) 912
PsrI GAACNNNNNNTAC 2 cut(s) 1123, 1155
PstI CTGCAG 1 cut(s) 985
PstNI CAGNNNCTG 2 cut(s) 281, 1620
PsuI RGATCY 2 cut(s) 208, 277
RruI TCGCGA 1 cut(s) 792
RsaI GTAC 7 cut(s) 40, 147, 564, 579, 707, 1293, 1421
RsaNI GTAC 7 cut(s) 39, 146, 563, 578, 706, 1292, 1420
SaqAI TTAA 6 cut(s) 180, 224, 296, 554, 1127, 1367
SatI GCNGC 2 cut(s) 1573, 1615
Sau3AI GATC 8 cut(s) 208, 277, 346, 793, 1099, 1330, 1557, 1561
Sau96I GGNCC 3 cut(s) 1349, 1486, 1522
ScaI AGTACT 1 cut(s) 707
SchI GAGTC 1 cut(s) 281
ScrFI CCNGG 2 cut(s) 1338, 1577
SduI GDGCHC 2 cut(s) 397, 919
SfaNI GCATC 6 cut(s) 159, 177, 394, 514, 957, 983
SfcI CTRYAG 3 cut(s) 5, 981, 1445
Sfr274I CTCGAG 1 cut(s) 912
SinI GGWCC 3 cut(s) 1349, 1486, 1522
SlaI CTCGAG 1 cut(s) 912
SmiI ATTTAAAT 1 cut(s) 297
SmlI CTYRAG 4 cut(s) 329, 912, 1375, 1526
SmoI CTYRAG 4 cut(s) 329, 912, 1375, 1526
SphI GCATGC 1 cut(s) 1216
Sse9I AATT 7 cut(s) 42, 108, 315, 620, 930, 1426, 1552
SsiI CCGC 2 cut(s) 212, 970
SspI AATATT 1 cut(s) 1384
SspMI CTAG 6 cut(s) 357, 1067, 1235, 1316, 1452, 1490
StyD4I CCNGG 2 cut(s) 1336, 1575
SwaI ATTTAAAT 1 cut(s) 297
TaaI ACNGT 4 cut(s) 244, 822, 1362, 1449
TaiI ACGT 3 cut(s) 388, 579, 1293
TaqI TCGA 3 cut(s) 319, 913, 1560
TasI AATT 7 cut(s) 42, 108, 315, 620, 930, 1426, 1552
TatI WGTACW 4 cut(s) 38, 562, 705, 1419
TfiI GAWTC 8 cut(s) 421, 488, 650, 803, 881, 1117, 1184, 1593
Tru1I TTAA 6 cut(s) 180, 224, 296, 554, 1127, 1367
Tru9I TTAA 6 cut(s) 180, 224, 296, 554, 1127, 1367
TscAI CASTG 3 cut(s) 249, 504, 619
TseFI GTSAC 1 cut(s) 1475
TseI GCWGC 2 cut(s) 1572, 1614
Tsp45I GTSAC 1 cut(s) 1475
TspDTI ATGAA 4 cut(s) 366, 741, 780, 1150
TspGWI ACGGA 2 cut(s) 760, 1064
TspRI CASTG 3 cut(s) 249, 504, 619
VpaK11BI GGWCC 3 cut(s) 1349, 1486, 1522
XapI RAATTY 3 cut(s) 315, 620, 1552
XbaI TCTAGA 1 cut(s) 1234
XceI RCATGY 2 cut(s) 861, 1216
XhoI CTCGAG 1 cut(s) 912
XspI CTAG 6 cut(s) 357, 1067, 1235, 1316, 1452, 1490
ZrmI AGTACT 1 cut(s) 707
Zsp2I ATGCAT 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.