pycom02g20640

exocyst complex component

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
18735753 .. 18737915
2163 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g20640.5

Sequence Viewer

Length: 1026 bp
ATGTCGAGCGACGGCGATGACGAGGATGAGCTCCTCCAGATGGCTCTCAAGGAGCAAGCCCAGCGCGACGTCAACTACAGGAAGCCCACCTCCAGCAACTCCCGTTCTGCCCCCGTAGCCAATTACGTCCAGCAGCCCCACCAGCAACCGCCCAGGAAACCCGCCGCTTCTCCTGCCCCCAATCACGCCGGCAAAACCAGCAACACCAGCAACAGGCGGCGGGTGGTGGATGACGACGACGAATCCGATGTCGACATGCTCAGCATATCCAGCGGCGATGAGGACTCCACCGCCAAAGATCAGCAGCGCGCGCGGTATCGAGGCGGCAGCGCCGCTTCTGCTGCTGCTGCCGCCAGACGTGGTTCTCGAGGAGATGATGATGCCGCTTGGGACGGCGGAGAGCCCGGTATCTGGAAGCACGTCGACGAGGCCGAGCTTGCTCGTAGGGTTCGTGAAATGCGAGAGACAAGATCAGCACCGGTGGCCCAAAAGGTTGAGCGCAAAGTTTCGACAGTGGGCTTGGCACGAAAGGGGCTTAACAATTTGCAGTCTTTCCCACGGGGCATGGAATGCATTGATCCCTTAGGCTTGGGGATCATAGACAACAAAACCTTAAGATTGATTACTGAGTCGTCGGACCATTTTCCGTCCAAGGATGACAAACTGGATAACAACCTTCGTGAGAAGTTGTTGTATTTCTCTGAGAAATTTGATGCCAAGCTCTTTATATCACGGATACACCAAGATACTGGTGCAGCAGATTTGGAGGCAGGTGCTCTTGCTCTAAAGATCGATCTTAAAGGACGGACTCAGCAGAGAAAACAGCTGGTCAAAGACAATTTTGACTGCTTTGTCTCTTGTAAAACCACAATTGATGATATTGAGTCAAAGTTAAAACGGATTGAAGAAGACCCTGAAGGTTCAGGCACTTCTCATTTGTTTAACTGTATGCAAGGAGTGAGTTCGTTGGCTAATCGTGCATTCCAGCCTCTATTTGAGAGACAGGCTCAAGCTGAGAAGATCTGA

Protein Analysis

342

Amino Acids

37.79

Weight (kDa)

5.97

Isoelectric Point (pI)

47.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 761
AasI GACNNNNNNGTC 1 cut(s) 851
AatII GACGTC 1 cut(s) 72
Acc36I ACCTGC 1 cut(s) 761
AccI GTMKAC 2 cut(s) 252, 423
AccII CGCG 4 cut(s) 66, 309, 311, 313
AclWI GGATC 2 cut(s) 572, 602
AcsI RAATTY 1 cut(s) 707
AcuI CTGAAG 1 cut(s) 936
AcyI GRCGYC 1 cut(s) 69
AfiI CCNNNNNNNGG 3 cut(s) 40, 213, 411
AflII CTTAAG 1 cut(s) 613
AgeI ACCGGT 1 cut(s) 478
AgsI TTSAA 1 cut(s) 905
AjiI CACGTC 2 cut(s) 359, 421
AjnI CCWGG 1 cut(s) 152
AluBI AGCT 5 cut(s) 31, 436, 721, 826, 1013
AluI AGCT 5 cut(s) 31, 436, 721, 826, 1013
Alw21I GWGCWC 2 cut(s) 33, 778
Alw26I GTCTC 3 cut(s) 458, 859, 994
AlwI GGATC 2 cut(s) 572, 602
Ama87I CYCGRG 1 cut(s) 366
AoxI GGCC 2 cut(s) 429, 483
ApeKI GCWGC 7 cut(s) 133, 304, 327, 341, 344, 347, 755
ApoI RAATTY 1 cut(s) 707
ArsI GACNNNNNNTTYG 2 cut(s) 234, 266
AsiGI ACCGGT 1 cut(s) 478
AspLEI GCGC 6 cut(s) 66, 309, 311, 313, 332, 501
AspS9I GGNCC 2 cut(s) 484, 637
AsuC2I CCSGG 1 cut(s) 405
AvaI CYCGRG 1 cut(s) 366
AvaII GGWCC 1 cut(s) 637
AxyI CCTNAGG 1 cut(s) 583
BanII GRGCYC 2 cut(s) 33, 405
BbsI GAAGAC 1 cut(s) 915
Bbv12I GWGCWC 2 cut(s) 33, 778
BbvI GCAGC 7 cut(s) 145, 316, 328, 331, 334, 339, 767
BccI CCATC 1 cut(s) 34
BceAI ACGGC 2 cut(s) 28, 409
BciT130I CCWGG 1 cut(s) 154
BciVI GTATCC 1 cut(s) 729
BcnI CCSGG 1 cut(s) 405
BcoDI GTCTC 3 cut(s) 458, 859, 994
BfmI CTRYAG 1 cut(s) 76
BfoI RGCGCY 1 cut(s) 333
BfrI CTTAAG 1 cut(s) 613
BfuAI ACCTGC 1 cut(s) 761
BfuI GTATCC 1 cut(s) 729
BglII AGATCT 1 cut(s) 1020
BlpI GCTNAGC 1 cut(s) 260
Bme1390I CCNGG 2 cut(s) 154, 405
Bme18I GGWCC 1 cut(s) 637
BmeT110I CYCGRG 1 cut(s) 366
BmgBI CACGTC 2 cut(s) 359, 421
BmgT120I GGNCC 2 cut(s) 484, 637
BmrFI CCNGG 2 cut(s) 154, 405
BmsI GCATC 2 cut(s) 370, 703
BpiI GAAGAC 1 cut(s) 915
BplI GAGNNNNNCTC 2 cut(s) 991, 1023
BpmI CTGGAG 2 cut(s) 20, 76
Bpu1102I GCTNAGC 1 cut(s) 260
BpuEI CTTGAG 2 cut(s) 32, 993
BpuMI CCSGG 1 cut(s) 405
Bsa29I ATCGAT 1 cut(s) 792
BsaHI GRCGYC 1 cut(s) 69
BsaJI CCNNGG 3 cut(s) 152, 557, 651
BsaWI WCCGGW 1 cut(s) 478
Bsc4I CCNNNNNNNGG 3 cut(s) 40, 213, 411
Bse118I RCCGGY 2 cut(s) 188, 478
Bse1I ACTGG 2 cut(s) 669, 754
Bse21I CCTNAGG 1 cut(s) 583
BseBI CCWGG 1 cut(s) 154
BseCI ATCGAT 1 cut(s) 792
BseDI CCNNGG 3 cut(s) 152, 557, 651
BseGI GGATG 3 cut(s) 31, 235, 661
BseLI CCNNNNNNNGG 3 cut(s) 40, 213, 411
BseMII CTCAG 5 cut(s) 274, 618, 693, 824, 1005
BseNI ACTGG 2 cut(s) 669, 754
BsePI GCGCGC 2 cut(s) 307, 309
BseRI GAGGAG 2 cut(s) 23, 384
BseXI GCAGC 7 cut(s) 145, 316, 328, 331, 334, 339, 767
BseYI CCCAGC 1 cut(s) 60
BsgI GTGCAG 1 cut(s) 774
Bsh1236I CGCG 4 cut(s) 66, 309, 311, 313
BshFI GGCC 2 cut(s) 431, 485
BshTI ACCGGT 1 cut(s) 478
BshVI ATCGAT 1 cut(s) 792
BsiHKAI GWGCWC 2 cut(s) 33, 778
BsiHKCI CYCGRG 1 cut(s) 366
BsiSI CCGG 3 cut(s) 189, 405, 479
BslFI GGGAC 1 cut(s) 404
BslI CCNNNNNNNGG 3 cut(s) 40, 213, 411
BsmAI GTCTC 3 cut(s) 458, 859, 994
BsmFI GGGAC 1 cut(s) 404
BsmI GAATGC 2 cut(s) 575, 980
BsnI GGCC 2 cut(s) 431, 485
BsoBI CYCGRG 1 cut(s) 366
Bsp1286I GDGCHC 3 cut(s) 33, 405, 778
Bsp143I GATC 7 cut(s) 298, 470, 577, 594, 789, 793, 1020
Bsp1720I GCTNAGC 1 cut(s) 260
BspANI GGCC 2 cut(s) 431, 485
BspCNI CTCAG 5 cut(s) 273, 619, 694, 823, 1006
BspDI ATCGAT 1 cut(s) 792
BspFNI CGCG 4 cut(s) 66, 309, 311, 313
BspMI ACCTGC 1 cut(s) 761
BspPI GGATC 2 cut(s) 572, 602
BspTI CTTAAG 1 cut(s) 613
BsrFI RCCGGY 2 cut(s) 188, 478
BsrI ACTGG 2 cut(s) 669, 754
BssAI RCCGGY 2 cut(s) 188, 478
BssECI CCNNGG 3 cut(s) 152, 557, 651
BssHII GCGCGC 2 cut(s) 307, 309
BssMI GATC 7 cut(s) 298, 470, 577, 594, 789, 793, 1020
BssNI GRCGYC 1 cut(s) 69
BssT1I CCWWGG 1 cut(s) 651
Bst2UI CCWGG 1 cut(s) 154
Bst4CI ACNGT 2 cut(s) 514, 947
BstACI GRCGYC 1 cut(s) 69
BstAFI CTTAAG 1 cut(s) 613
BstAPI GCANNNNNTGC 1 cut(s) 570
BstC8I GCNNGC 5 cut(s) 57, 190, 309, 311, 438
BstDEI CTNAG 6 cut(s) 260, 583, 627, 702, 810, 1014
BstDSI CCRYGG 1 cut(s) 557
BstF5I GGATG 3 cut(s) 31, 235, 661
BstFNI CGCG 4 cut(s) 66, 309, 311, 313
BstH2I RGCGCY 1 cut(s) 333
BstHHI GCGC 6 cut(s) 66, 309, 311, 313, 332, 501
BstKTI GATC 7 cut(s) 301, 473, 580, 597, 792, 796, 1023
BstMAI GTCTC 3 cut(s) 458, 859, 994
BstMBI GATC 7 cut(s) 298, 470, 577, 594, 789, 793, 1020
BstNI CCWGG 1 cut(s) 154
BstNSI RCATGY 1 cut(s) 259
BstSCI CCNGG 2 cut(s) 152, 403
BstSFI CTRYAG 1 cut(s) 76
BstUI CGCG 4 cut(s) 66, 309, 311, 313
BstV1I GCAGC 7 cut(s) 145, 316, 328, 331, 334, 339, 767
BstV2I GAAGAC 1 cut(s) 915
BstX2I RGATCY 1 cut(s) 1020
BstXI CCANNNNNNTGG 1 cut(s) 749
BstYI RGATCY 1 cut(s) 1020
Bsu15I ATCGAT 1 cut(s) 792
Bsu36I CCTNAGG 1 cut(s) 583
BsuI GTATCC 1 cut(s) 729
BsuRI GGCC 2 cut(s) 431, 485
BsuTUI ATCGAT 1 cut(s) 792
BtgI CCRYGG 1 cut(s) 557
BtgZI GCGATG 2 cut(s) 30, 291
BtrI CACGTC 2 cut(s) 359, 421
BtsCI GGATG 3 cut(s) 31, 235, 661
BtsIMutI CAGTG 1 cut(s) 519
BveI ACCTGC 1 cut(s) 761
Cac8I GCNNGC 5 cut(s) 57, 190, 309, 311, 438
CfoI GCGC 6 cut(s) 66, 309, 311, 313, 332, 501
Cfr10I RCCGGY 2 cut(s) 188, 478
Cfr13I GGNCC 2 cut(s) 484, 637
ClaI ATCGAT 1 cut(s) 792
CspAI ACCGGT 1 cut(s) 478
CviAII CATG 2 cut(s) 256, 565
DdeI CTNAG 6 cut(s) 260, 583, 627, 702, 810, 1014
DpnI GATC 7 cut(s) 300, 472, 579, 596, 791, 795, 1022
DpnII GATC 7 cut(s) 298, 470, 577, 594, 789, 793, 1020
DrdI GACNNNNNNGTC 1 cut(s) 851
DseDI GACNNNNNNGTC 1 cut(s) 851
EciI GGCGGA 1 cut(s) 411
Ecl136II GAGCTC 1 cut(s) 31
Eco130I CCWWGG 1 cut(s) 651
Eco24I GRGCYC 2 cut(s) 33, 405
Eco47I GGWCC 1 cut(s) 637
Eco53kI GAGCTC 1 cut(s) 31
Eco57I CTGAAG 1 cut(s) 936
Eco81I CCTNAGG 1 cut(s) 583
Eco88I CYCGRG 1 cut(s) 366
EcoICRI GAGCTC 1 cut(s) 31
EcoRII CCWGG 1 cut(s) 152
EcoT14I CCWWGG 1 cut(s) 651
EcoT22I ATGCAT 1 cut(s) 575
EcoT38I GRGCYC 2 cut(s) 33, 405
ErhI CCWWGG 1 cut(s) 651
FaeI CATG 2 cut(s) 259, 568
FaiI YATR 6 cut(s) 257, 266, 566, 599, 728, 950
FaqI GGGAC 1 cut(s) 404
FatI CATG 2 cut(s) 255, 564
FauI CCCGC 2 cut(s) 169, 213
FblI GTMKAC 2 cut(s) 252, 423
FokI GGATG 3 cut(s) 38, 242, 668
FriOI GRGCYC 2 cut(s) 33, 405
GlaI GCGC 6 cut(s) 65, 308, 310, 312, 331, 500
GsaI CCCAGC 1 cut(s) 64
GsuI CTGGAG 2 cut(s) 20, 76
HaeII RGCGCY 1 cut(s) 333
HaeIII GGCC 2 cut(s) 431, 485
HapII CCGG 3 cut(s) 189, 405, 479
HhaI GCGC 6 cut(s) 66, 309, 311, 313, 332, 501
Hin1I GRCGYC 1 cut(s) 69
Hin1II CATG 2 cut(s) 259, 568
Hin6I GCGC 6 cut(s) 64, 307, 309, 311, 330, 499
HinP1I GCGC 6 cut(s) 64, 307, 309, 311, 330, 499
HincII GTYRAC 3 cut(s) 73, 253, 424
HindII GTYRAC 3 cut(s) 73, 253, 424
HinfI GANTC 5 cut(s) 242, 284, 629, 808, 884
HpaII CCGG 3 cut(s) 189, 405, 479
Hpy166II GTNNAC 3 cut(s) 73, 253, 424
Hpy188I TCNGA 4 cut(s) 247, 637, 703, 1025
Hpy188III TCNNGA 5 cut(s) 37, 366, 412, 452, 680
Hpy8I GTNNAC 3 cut(s) 73, 253, 424
Hpy99I CGWCG 7 cut(s) 14, 71, 239, 242, 425, 428, 637
HpyAV CCTTC 2 cut(s) 686, 911
HpyCH4III ACNGT 2 cut(s) 514, 947
HpyCH4IV ACGT 4 cut(s) 69, 126, 358, 420
HpyCH4V TGCA 5 cut(s) 547, 573, 755, 952, 980
HpyF3I CTNAG 6 cut(s) 260, 583, 627, 702, 810, 1014
HpySE526I ACGT 4 cut(s) 69, 126, 358, 420
Hsp92I GRCGYC 1 cut(s) 69
Hsp92II CATG 2 cut(s) 259, 568
HspAI GCGC 6 cut(s) 64, 307, 309, 311, 330, 499
KroI GCCGGC 1 cut(s) 188
KroNI GCCGGC 1 cut(s) 190
Kzo9I GATC 7 cut(s) 298, 470, 577, 594, 789, 793, 1020
LmnI GCTCC 2 cut(s) 36, 52
Lsp1109I GCAGC 7 cut(s) 145, 316, 328, 331, 334, 339, 767
LweI GCATC 2 cut(s) 370, 703
MaeII ACGT 4 cut(s) 69, 126, 358, 420
MalI GATC 7 cut(s) 300, 472, 579, 596, 791, 795, 1022
MauBI CGCGCGCG 1 cut(s) 309
MboI GATC 7 cut(s) 298, 470, 577, 594, 789, 793, 1020
MboII GAAGA 2 cut(s) 917, 920
MfeI CAATTG 1 cut(s) 870
MflI RGATCY 1 cut(s) 1020
MhlI GDGCHC 3 cut(s) 33, 405, 778
MluCI AATT 5 cut(s) 121, 541, 707, 838, 870
MlyI GAGTC 4 cut(s) 278, 638, 802, 893
MmeI TCCRAC 1 cut(s) 615
MnlI CCTC 9 cut(s) 16, 44, 100, 274, 314, 362, 421, 760, 999
Mph1103I ATGCAT 1 cut(s) 575
MroNI GCCGGC 1 cut(s) 188
MseI TTAA 5 cut(s) 537, 614, 798, 893, 942
MspA1I CMGCKG 2 cut(s) 273, 826
MspCI CTTAAG 1 cut(s) 613
MspI CCGG 3 cut(s) 189, 405, 479
MspR9I CCNGG 2 cut(s) 154, 405
MunI CAATTG 1 cut(s) 870
Mva1269I GAATGC 2 cut(s) 575, 980
MvaI CCWGG 1 cut(s) 154
MvnI CGCG 4 cut(s) 66, 309, 311, 313
NaeI GCCGGC 1 cut(s) 190
NciI CCSGG 1 cut(s) 405
NdeII GATC 7 cut(s) 298, 470, 577, 594, 789, 793, 1020
NgoMIV GCCGGC 1 cut(s) 188
NlaIII CATG 2 cut(s) 259, 568
NmeAIII GCCGAG 1 cut(s) 457
NsiI ATGCAT 1 cut(s) 575
NspI RCATGY 1 cut(s) 259
PaeR7I CTCGAG 1 cut(s) 366
PaqCI CACCTGC 1 cut(s) 761
PauI GCGCGC 2 cut(s) 307, 309
PcsI WCGNNNNNNNCGW 6 cut(s) 18, 243, 364, 429, 448, 457
PctI GAATGC 2 cut(s) 575, 980
PdiI GCCGGC 1 cut(s) 190
PfeI GAWTC 1 cut(s) 242
PinAI ACCGGT 1 cut(s) 478
PleI GAGTC 4 cut(s) 278, 637, 802, 892
PpsI GAGTC 4 cut(s) 278, 637, 802, 892
Psp124BI GAGCTC 1 cut(s) 33
Psp6I CCWGG 1 cut(s) 152
PspFI CCCAGC 1 cut(s) 60
PspGI CCWGG 1 cut(s) 152
PspPI GGNCC 2 cut(s) 484, 637
PsuI RGATCY 1 cut(s) 1020
PteI GCGCGC 2 cut(s) 307, 309
PvuII CAGCTG 1 cut(s) 826
SacI GAGCTC 1 cut(s) 33
SalI GTCGAC 2 cut(s) 251, 422
SaqAI TTAA 5 cut(s) 537, 614, 798, 893, 942
Sau3AI GATC 7 cut(s) 298, 470, 577, 594, 789, 793, 1020
Sau96I GGNCC 2 cut(s) 484, 637
SchI GAGTC 4 cut(s) 278, 638, 802, 893
ScrFI CCNGG 2 cut(s) 154, 405
SduI GDGCHC 3 cut(s) 33, 405, 778
SfaNI GCATC 2 cut(s) 370, 703
SfcI CTRYAG 1 cut(s) 76
Sfr274I CTCGAG 1 cut(s) 366
SgrAI CRCCGGYG 1 cut(s) 478
SgrDI CGTCGACG 1 cut(s) 422
SinI GGWCC 1 cut(s) 637
SlaI CTCGAG 1 cut(s) 366
SmlI CTYRAG 4 cut(s) 47, 366, 613, 1008
SmoI CTYRAG 4 cut(s) 47, 366, 613, 1008
Sse9I AATT 5 cut(s) 121, 541, 707, 838, 870
SstI GAGCTC 1 cut(s) 33
StyD4I CCNGG 2 cut(s) 152, 403
StyI CCWWGG 1 cut(s) 651
TaaI ACNGT 2 cut(s) 514, 947
TaiI ACGT 4 cut(s) 72, 129, 361, 423
TaqI TCGA 7 cut(s) 5, 252, 319, 367, 423, 509, 792
TasI AATT 5 cut(s) 121, 541, 707, 838, 870
TauI GCSGC 7 cut(s) 167, 220, 276, 327, 335, 353, 386
TfiI GAWTC 1 cut(s) 242
Tru1I TTAA 5 cut(s) 537, 614, 798, 893, 942
Tru9I TTAA 5 cut(s) 537, 614, 798, 893, 942
TscAI CASTG 1 cut(s) 519
TseI GCWGC 7 cut(s) 133, 304, 327, 341, 344, 347, 755
TspGWI ACGGA 4 cut(s) 636, 748, 820, 913
TspRI CASTG 1 cut(s) 519
Vha464I CTTAAG 1 cut(s) 613
VpaK11BI GGWCC 1 cut(s) 637
XapI RAATTY 1 cut(s) 707
XceI RCATGY 1 cut(s) 259
XhoI CTCGAG 1 cut(s) 366
XmiI GTMKAC 2 cut(s) 252, 423
ZraI GACGTC 1 cut(s) 70
Zsp2I ATGCAT 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.