Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003765

Physical Location & Seq

Genomic Coordinates Reverse (-)

7417281 .. 7433276

Gene Structure 15996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G058700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3327 bp

ATGGCAAGCGACAGCGACCTAGACGAGGACGATCTCCTCCAGATGGCTCTAAAGGAGCAAGCCCAGCGCGATGTGAATTACAAAAAGCCACCCTCCAGCAACTCCCGCACTGCCCCCGTCGCCAATTACGTTCAGCAGCCGCAGCCTCCTCCGTCCCAGCAGCCACGAAAAGCCGCGGCTTCTCCGAGCCCCAAAAACAACACCACTACCAGAAGCAACGCCAACAACCCGAAGCGGCGGGTGGTGGACGACGACGAGGAGTCCGATGTGGACATGCTCAGCATCTCCAGCGGCGATGAAGACTCCACCGCCAGGGATCAGCAGCGTGTCCGCTTCCGAGGCGGCGGTGCTGCTTCTGCTGCTACCGCCAGAGCTGGAGCCCGGGACGACGATGACCCTTGGGACGGCGGTGAGCCTGGCTGCTGGAAGCACGTCGACGAGGCTGAGCTTGCTCGTAGGGTTCGTGAAATGCGAGAGACGAGAACAGCACCGGTGGCCCAAAAGGTTGAGCGCAAAGTGTCGTCGGCAGGCTTGGTACGAAAGGGCCTTAACAATTTACAGTCCTTCCCTCGGGGCATGGAATGTATTGATCCCCTAGGCTTGGGGATCATAGACAACAAAACCTTAAGATTGATAACTGAATCCTCAGACTATTCGCCATCCAAGGACGACAAATTGGATAATAACCTTCGGGAGAAGTTGTTATATTTTTCTGAGAAATTTGATGCCAAGCTCTTTATATCGCGGATTCACCAAGACACTGCTGCAGCAGAGTTGGAGGCTGGTGCTTTGGCTCTAAAAAGTGATCTTAAAGGACGAACTCTGCAGAGAAAACAATTGGTCAAAGACAATTTTGACTGCTTTGTCTCTTGCAAAACAACAATTGATGATATTGAGTCAAAGTTGAAACGGATTGAAGAAGACCCTGAAGGTTCAGGCACTTCTCATTTGTTTAATTGTATGCAAGGAGTGAGTTCGTTGGCTAATCGGGCATTCCAGCCTCTATTTGAGAGACAGGCTCAAGCTGAGAAGATCAGGTCCGTCCAAGGAATGCTACAGAGGTTCCGGACATTGTTCAACTTGCCCAGTACAATTCGTGGTAGCATAAGCAAGGGAGAATATGACTTGGCAGTTAGGGAGTACAAGAAGGCCAAGTCGATTGCTCTGCCTTCTCATGTGGGCATACTGAAACGTGTTCTCGAAGAGGTTGAGAAAGTGATGCATGAGTTTAAAGGCATGCTTTACAAGTCTATGGAAGATCCACAAATAGATTTAACAAATGTTGAAAACACAGTGAGGCTGTTATTGGAGCTGGAGCCTGAGTCAGACCCGGTTTGGCACTATTTAAATATACAGAATAACAGAATTCGAGGTTTGCTTGAGAAATGCACGTTAGATCATGAAACTAGGATGGAGACTTTACATAATGAGTTACGTGAAAGGGCTGTGTCTGATGCACGATGGAGGCAGATTCAAGGAGATATAAATCAATCTTCAGATGTCAACTATTCTCTTACTCTTGGCGACAACCACCTTCCAGTAGATTCTCTTCCAGTAGACTTGACAGGTGAAGAAGTTGATGCTCTTAGAGGGAGGTATATTCGCAGATTAACTGCTGTACTGATTTATCACATACCAGCTTTCTGGAAAGTAGCACTTTCTGTTTTCAGTGGGAAATTCGCAAAGTCGTCCCAAGTTTCTACTGAATCAAATGCTAGCACTCCAGCAAATAAAACGGATGAAAAAGTTGGAGATGGGAAGTACTCAACTCATTCTCTAGATGAAGTTGTTGGAATGATACAAATTACATTAACTGCGTATGCAGATAAGGTTCGTACTACATTTCATGATCTTGAGGAATCAAATATTCTGCAACCATATATGAGCGATGCCATAACAGAAATATCTAAAGCATGCGAAGCTTTTCAAGCGAAGGAATCAGCTCCTTCGATTGCTGTAACTGCAATTCGAACACTTCAGTCGGAGATTACAAAGATTTACATCCTAAGGCTTTGCTCATGGATGCGGGCATCAACTGCTGATATCTCAAAAGATGAGACATGGGTTCCAGTATCAGTTCTTGAAAGGAATAAATCTCCCTACACAATCTCTTTCTTGCCTTTAGCATTCCGCAATGTTATGACGTCAGCAATGGATCAGATCAAGTTGATGGTTCAGTCTTTAAGAAGTGAGGCAACGAGGTCAGAGGAAGTGTATAAGCAACTCCAAGAAATTCAAGACTCTGTCAGACTTGCATTTTTGAACTGTATTCTTGATTTTGCAGGTCATCTAGAGCGTATTGGAAGTGGGCTTGCCCAAAACAAATCAAGCAAAGGAAGTTCACTTGTACACAATGGTTATTCTCCTAACCTAGAAGAAAAGCTAATGTCTGATCTCCCAGGAAGTTTTGGTCCACATCAACAGTTGTTGATAGTGTTGAGTAATGTTGGCTATTGCAAAGAAGAACTTTCTTATGAGTTGTACAACAATTACAAGCATATCTGGCTACAGTCTAGGGAAAGAGAGGAAGATGATAGTGATATACAAGACTTGGTGATGTCTTTTTCTGTGCTTGAAGAGAAGGTCCTGGAGCAATATACTTTTGCTAAGGCAAATTTGATCAGAACTGCTGCCTTCAACTATTTGTTGGATTCTGGTGTACAATGGGGAGCAGCACCTGCTTTAAAAGGTGTGCGTGATGCTGCTGTGGAGTTACTGCACACTTTGGTAGCTGTGCATGCAGAGGTATTTTCTGGTGCTAAGCCCCTGTTGGACAAGACACTTGGCATTCTGGTGGAAGGTCTAATTGATACTTTTATCAGCTTGTTTCATGAAAATCAAGCGAAAGAGCTTAGATCACTTGATGCAAATGGTTTCTGTCAGCTAATGCTTGAGCTTGAGTACTTCGAGACTATATTGAATCCATATTTTACTTCGGCTGCAAGGGAGTCTCTGAAGTCGTTACAAGGGATACTTCTGGATAAAGCCACTGAGAGTGTGACAGAAAATGTGGAGAATCCAGGGCATAACCGACGAGCAACACGCGGAAGTGAAGATGCGGTTTCAGATGATAGACAGCAGGGGACAAGTGTGTCACCAGATGACCTGATTGCCCTTGCTCAGCAGTATAGCTCTGAGTTACTTCAAGCAGAGCTCGAGAGGACTCAAATCAACACAGCATGTTTTGTGGAGTCAATTCCATTAGACTCAGTACCCGAATCAGCTAAGCGCGCTTATGCTTCATTTAGGGGCTCACTAGATTCACCCAGCAGAAACTACAAAGGCAACACAGGATCCCCAAGCTACTCCCGGAATAGGCGTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0001927 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0007154 GO:0008037 GO:0008150 GO:0009506 GO:0009856 GO:0009875 GO:0009987 GO:0016020 GO:0016043 GO:0016192 GO:0022406 GO:0022414 GO:0022607 GO:0030054 GO:0031982 GO:0032501 GO:0032940 GO:0032991 GO:0034622 GO:0043226 GO:0043227 GO:0043230 GO:0043933 GO:0044085 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0046903 GO:0048278 GO:0048544 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051704 GO:0055044 GO:0060321 GO:0065003 GO:0070062 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056 GO:1903561

KEGG Pathways

Metabolic & Signaling

ko04014 map04014

Pfam Domains

Protein Families

Sec5

Protein Analysis

1109

Amino Acids

124.03

Weight (kDa)

5.49

Isoelectric Point (pI)

52.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21170 AT1G21170 AT1G76850
fragaria_vesca	FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280 FvH4_7g05280
malus_domestica	MD02G1241200.v1.1 MD02G1241400.v1.1 MD07G1075500.v1.1
prunus_persica	Prupe.8G058700_v2.0.a1 Prupe.8G058700_v2.0.a1
pyrus_communis	pycom02g20640 pycom02g20660 pycom02g20670 pycom02g20680 pycom02g20750 pycom02g20760 pycom07g05950
rosa_chinensis	RchiOBHm_Chr1g0332001
rosa_laevigata	RLG00000029699
rosa_multiflora	Rmu_co8474765.1_g000001 Rmu_sc0003358.1_g000014
rosa_roxburghii	Rroxscaffold_4G00318510
rosa_rugosa	Rorug01G0097700
rosa_samantha	Rh1AG121600 Rh1BG093100 Rh1CG116400 Rh1DG127300
rosa_wichuraiana	Rw1G009920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2686
AasI	GACNNNNNNGTC	2 cut(s)	863, 3091
AatII	GACGTC	1 cut(s)	2147
Acc36I	ACCTGC	2 cut(s)	2273, 2686
AccI	GTMKAC	2 cut(s)	435, 1557
AccII	CGCG	5 cut(s)	69, 176, 745, 3045, 3231
AccIII	TCCGGA	1 cut(s)	1065
AclWI	GGATC	7 cut(s)	324, 584, 614, 1253, 2163, 3288, 3301
AcsI	RAATTY	5 cut(s)	719, 1365, 1676, 2232, 2614
AcuI	CTGAAG	4 cut(s)	948, 1479, 1961, 2975
AcyI	GRCGYC	2 cut(s)	2144, 3319
AfiI	CCNNNNNNNGG	7 cut(s)	25, 43, 312, 404, 570, 601, 3315
AflII	CTTAAG	1 cut(s)	625
AflIII	ACRYGT	1 cut(s)	1192
AgeI	ACCGGT	1 cut(s)	490
AhdI	GACNNNNNGTC	1 cut(s)	259
AjiI	CACGTC	1 cut(s)	433
AjnI	CCWGG	5 cut(s)	311, 415, 2398, 2586, 3019
Alw21I	GWGCWC	1 cut(s)	3156
Alw26I	GTCTC	7 cut(s)	470, 871, 1006, 1409, 2051, 2903, 2955
AlwI	GGATC	7 cut(s)	324, 584, 614, 1253, 2163, 3288, 3301
AlwNI	CAGNNNCTG	1 cut(s)	2678
Ama87I	CYCGRG	3 cut(s)	381, 570, 3155
Aor13HI	TCCGGA	1 cut(s)	1065
AoxI	GGCC	3 cut(s)	495, 544, 1149
ApoI	RAATTY	5 cut(s)	719, 1365, 1676, 2232, 2614
AsiGI	ACCGGT	1 cut(s)	490
Asp700I	GAANNNNTTC	1 cut(s)	1923
AspA2I	CCTAGG	1 cut(s)	595
AspLEI	GCGC	4 cut(s)	69, 513, 3231, 3233
AspS9I	GGNCC	5 cut(s)	496, 544, 1038, 2411, 2584
AsuC2I	CCSGG	4 cut(s)	382, 383, 1331, 3310
AsuHPI	GGTGA	6 cut(s)	422, 743, 1580, 2566, 3087, 3255
AsuII	TTCGAA	1 cut(s)	1969
AsuNHI	GCTAGC	1 cut(s)	1715
AvaI	CYCGRG	3 cut(s)	381, 570, 3155
AvaII	GGWCC	3 cut(s)	1038, 2411, 2584
AvrII	CCTAGG	1 cut(s)	595
AxyI	CCTNAGG	1 cut(s)	2006
BamHI	GGATCC	1 cut(s)	3293
BanII	GRGCYC	4 cut(s)	191, 382, 3156, 3254
BarI	GAAGNNNNNNTAC	2 cut(s)	1533, 1565
BbsI	GAAGAC	2 cut(s)	306, 927
Bbv12I	GWGCWC	1 cut(s)	3156
BccI	CCATC	6 cut(s)	37, 667, 1405, 1455, 1748, 2164
BceAI	ACGGC	1 cut(s)	421
BcgI	CGANNNNNNTGC	2 cut(s)	1147, 1181
BciT130I	CCWGG	5 cut(s)	313, 417, 2400, 2588, 3021
BciVI	GTATCC	1 cut(s)	2964
BclI	TGATCA	1 cut(s)	2619
BcnI	CCSGG	4 cut(s)	382, 383, 1331, 3310
BcoDI	GTCTC	7 cut(s)	470, 871, 1006, 1409, 2051, 2903, 2955
BfaI	CTAG	9 cut(s)	20, 596, 1407, 1716, 1778, 2291, 2372, 2514, 3257
BfmI	CTRYAG	4 cut(s)	765, 824, 1055, 2507
BfrI	CTTAAG	1 cut(s)	625
BfuAI	ACCTGC	2 cut(s)	2273, 2686
BfuI	GTATCC	1 cut(s)	2964
BlnI	CCTAGG	1 cut(s)	595
BlpI	GCTNAGC	5 cut(s)	278, 444, 2760, 3120, 3225
BmcAI	AGTACT	2 cut(s)	1763, 2903
Bme1390I	CCNGG	9 cut(s)	313, 382, 383, 417, 1331, 2400, 2588, 3021, 3310
Bme18I	GGWCC	3 cut(s)	1038, 2411, 2584
BmeRI	GACNNNNNGTC	1 cut(s)	259
BmeT110I	CYCGRG	3 cut(s)	381, 570, 3155
BmgBI	CACGTC	1 cut(s)	433
BmgT120I	GGNCC	5 cut(s)	496, 544, 1038, 2411, 2584
BmiI	GGNNCC	5 cut(s)	379, 1064, 1317, 2067, 3295
BmrFI	CCNGG	9 cut(s)	313, 382, 383, 417, 1331, 2400, 2588, 3021, 3310
BmrI	ACTGGG	1 cut(s)	1080
BmtI	GCTAGC	1 cut(s)	1719
BmuI	ACTGGG	1 cut(s)	1080
BpiI	GAAGAC	2 cut(s)	306, 927
BplI	GAGNNNNNCTC	2 cut(s)	1003, 1035
BpmI	CTGGAG	7 cut(s)	23, 79, 271, 396, 1334, 1707, 2609
Bpu10I	CCTNAGC	1 cut(s)	2607
Bpu1102I	GCTNAGC	5 cut(s)	278, 444, 2760, 3120, 3225
Bpu14I	TTCGAA	1 cut(s)	1969
BpuEI	CTTGAG	5 cut(s)	1005, 1400, 1874, 2912, 2918
BpuMI	CCSGG	4 cut(s)	382, 383, 1331, 3310
BsaAI	YACGTR	1 cut(s)	1436
BsaBI	GATNNNNATC	2 cut(s)	1485, 2000
BsaHI	GRCGYC	2 cut(s)	2144, 3319
BsaWI	WCCGGW	2 cut(s)	490, 1065
BsaXI	ACNNNNNCTCC	4 cut(s)	686, 716, 1307, 1337
Bsc4I	CCNNNNNNNGG	7 cut(s)	25, 43, 312, 404, 570, 601, 3315
Bse118I	RCCGGY	1 cut(s)	490
Bse1I	ACTGG	4 cut(s)	1086, 1538, 1553, 2069
Bse21I	CCTNAGG	1 cut(s)	2006
Bse3DI	GCAATG	2 cut(s)	2140, 2157
Bse8I	GATNNNNATC	2 cut(s)	1485, 2000
BseAI	TCCGGA	1 cut(s)	1065
BseBI	CCWGG	5 cut(s)	313, 417, 2400, 2588, 3021
BseGI	GGATG	5 cut(s)	659, 1416, 1744, 2001, 2028
BseJI	GATNNNNATC	2 cut(s)	1485, 2000
BseLI	CCNNNNNNNGG	7 cut(s)	25, 43, 312, 404, 570, 601, 3315
BseMI	GCAATG	2 cut(s)	2140, 2157
BseNI	ACTGG	4 cut(s)	1086, 1538, 1553, 2069
BsePI	GCGCGC	1 cut(s)	3229
BseRI	GAGGAG	3 cut(s)	26, 138, 272
BseYI	CCCAGC	3 cut(s)	63, 156, 3266
BsgI	GTGCAG	1 cut(s)	2702
Bsh1236I	CGCG	5 cut(s)	69, 176, 745, 3045, 3231
BshFI	GGCC	3 cut(s)	497, 546, 1151
BshTI	ACCGGT	1 cut(s)	490
BsiHKAI	GWGCWC	1 cut(s)	3156
BsiHKCI	CYCGRG	3 cut(s)	381, 570, 3155
BsiSI	CCGG	5 cut(s)	382, 491, 1066, 1331, 3310
BslFI	GGGAC	5 cut(s)	139, 398, 416, 1675, 3097
BslI	CCNNNNNNNGG	7 cut(s)	25, 43, 312, 404, 570, 601, 3315
BsmAI	GTCTC	7 cut(s)	470, 871, 1006, 1409, 2051, 2903, 2955
BsmBI	CGTCTC	1 cut(s)	470
BsmFI	GGGAC	5 cut(s)	139, 398, 416, 1675, 3097
BsmI	GAATGC	4 cut(s)	992, 1056, 2126, 2787
BsnI	GGCC	3 cut(s)	497, 546, 1151
BsoBI	CYCGRG	3 cut(s)	381, 570, 3155
Bsp119I	TTCGAA	1 cut(s)	1969
Bsp1286I	GDGCHC	4 cut(s)	191, 382, 3156, 3254
Bsp13I	TCCGGA	1 cut(s)	1065
Bsp1407I	TGTACA	3 cut(s)	2347, 2481, 2659
Bsp1720I	GCTNAGC	5 cut(s)	278, 444, 2760, 3120, 3225
BspANI	GGCC	3 cut(s)	497, 546, 1151
BspEI	TCCGGA	1 cut(s)	1065
BspFNI	CGCG	5 cut(s)	69, 176, 745, 3045, 3231
BspHI	TCATGA	3 cut(s)	1399, 1846, 2830
BspLI	GGNNCC	5 cut(s)	379, 1064, 1317, 2067, 3295
BspMAI	CTGCAG	2 cut(s)	769, 828
BspMI	ACCTGC	2 cut(s)	2273, 2686
BspOI	GCTAGC	1 cut(s)	1719
BspPI	GGATC	7 cut(s)	324, 584, 614, 1253, 2163, 3288, 3301
BspT104I	TTCGAA	1 cut(s)	1969
BspTI	CTTAAG	1 cut(s)	625
BsrDI	GCAATG	2 cut(s)	2140, 2157
BsrFI	RCCGGY	1 cut(s)	490
BsrGI	TGTACA	3 cut(s)	2347, 2481, 2659
BsrI	ACTGG	4 cut(s)	1086, 1538, 1553, 2069
BssAI	RCCGGY	1 cut(s)	490
BssHII	GCGCGC	1 cut(s)	3229
BssNI	GRCGYC	2 cut(s)	2144, 3319
BssT1I	CCWWGG	4 cut(s)	398, 595, 663, 1045
Bst2UI	CCWGG	5 cut(s)	313, 417, 2400, 2588, 3021
Bst4CI	ACNGT	5 cut(s)	561, 1294, 2267, 2424, 2511
Bst6I	CTCTTC	3 cut(s)	1197, 1554, 2571
BstACI	GRCGYC	2 cut(s)	2144, 3319
BstAFI	CTTAAG	1 cut(s)	625
BstAPI	GCANNNNNTGC	2 cut(s)	2036, 2678
BstAUI	TGTACA	3 cut(s)	2347, 2481, 2659
BstBAI	YACGTR	1 cut(s)	1436
BstBI	TTCGAA	1 cut(s)	1969
BstDSI	CCRYGG	1 cut(s)	174
BstENI	CCTNNNNNAGG	1 cut(s)	23
BstF5I	GGATG	5 cut(s)	659, 1416, 1744, 2001, 2028
BstFNI	CGCG	5 cut(s)	69, 176, 745, 3045, 3231
BstHHI	GCGC	4 cut(s)	69, 513, 3231, 3233
BstMAI	GTCTC	7 cut(s)	470, 871, 1006, 1409, 2051, 2903, 2955
BstNI	CCWGG	5 cut(s)	313, 417, 2400, 2588, 3021
BstNSI	RCATGY	5 cut(s)	277, 1240, 1917, 2741, 3183
BstSCI	CCNGG	9 cut(s)	311, 380, 381, 415, 1329, 2398, 2586, 3019, 3308
BstSFI	CTRYAG	4 cut(s)	765, 824, 1055, 2507
BstUI	CGCG	5 cut(s)	69, 176, 745, 3045, 3231
BstV2I	GAAGAC	2 cut(s)	306, 927
BstX2I	RGATCY	2 cut(s)	1258, 3293
BstXI	CCANNNNNNTGG	1 cut(s)	1644
BstYI	RGATCY	2 cut(s)	1258, 3293
Bsu36I	CCTNAGG	1 cut(s)	2006
BsuI	GTATCC	1 cut(s)	2964
BsuRI	GGCC	3 cut(s)	497, 546, 1151
BtgI	CCRYGG	1 cut(s)	174
BtgZI	GCGATG	3 cut(s)	84, 309, 1902
BtrI	CACGTC	1 cut(s)	433
BtsCI	GGATG	5 cut(s)	659, 1416, 1744, 2001, 2028
BtsI	GCAGTG	2 cut(s)	108, 759
BtsIMutI	CAGTG	5 cut(s)	108, 759, 1299, 1675, 2988
BveI	ACCTGC	2 cut(s)	2273, 2686
CaiI	CAGNNNCTG	1 cut(s)	2678
CciI	TCATGA	3 cut(s)	1399, 1846, 2830
CfoI	GCGC	4 cut(s)	69, 513, 3231, 3233
Cfr10I	RCCGGY	1 cut(s)	490
Cfr13I	GGNCC	5 cut(s)	496, 544, 1038, 2411, 2584
Cfr42I	CCGCGG	1 cut(s)	177
Cfr9I	CCCGGG	1 cut(s)	381
CseI	GACGC	1 cut(s)	3308
CspAI	ACCGGT	1 cut(s)	490
DraI	TTTAAA	3 cut(s)	1231, 1347, 2685
DrdI	GACNNNNNNGTC	2 cut(s)	863, 3091
DriI	GACNNNNNGTC	1 cut(s)	259
DseDI	GACNNNNNNGTC	2 cut(s)	863, 3091
Eam1104I	CTCTTC	3 cut(s)	1197, 1554, 2571
Eam1105I	GACNNNNNGTC	1 cut(s)	259
EarI	CTCTTC	3 cut(s)	1197, 1554, 2571
Ecl136II	GAGCTC	1 cut(s)	3154
Eco130I	CCWWGG	4 cut(s)	398, 595, 663, 1045
Eco24I	GRGCYC	4 cut(s)	191, 382, 3156, 3254
Eco32I	GATATC	1 cut(s)	2044
Eco47I	GGWCC	3 cut(s)	1038, 2411, 2584
Eco53kI	GAGCTC	1 cut(s)	3154
Eco57I	CTGAAG	4 cut(s)	948, 1479, 1961, 2975
Eco81I	CCTNAGG	1 cut(s)	2006
Eco88I	CYCGRG	3 cut(s)	381, 570, 3155
EcoICRI	GAGCTC	1 cut(s)	3154
EcoNI	CCTNNNNNAGG	1 cut(s)	23
EcoO109I	RGGNCCY	2 cut(s)	544, 2584
EcoRI	GAATTC	1 cut(s)	1365
EcoRII	CCWGG	5 cut(s)	311, 415, 2398, 2586, 3019
EcoRV	GATATC	1 cut(s)	2044
EcoT14I	CCWWGG	4 cut(s)	398, 595, 663, 1045
EcoT22I	ATGCAT	1 cut(s)	1224
EcoT38I	GRGCYC	4 cut(s)	191, 382, 3156, 3254
ErhI	CCWWGG	4 cut(s)	398, 595, 663, 1045
Esp3I	CGTCTC	1 cut(s)	470
FalI	AAGNNNNNCTT	8 cut(s)	1224, 1256, 1641, 1673, 2451, 2483, 2958, 2990
FaqI	GGGAC	5 cut(s)	139, 398, 416, 1675, 3097
FauI	CCCGC	3 cut(s)	113, 231, 2019
FbaI	TGATCA	1 cut(s)	2619
FblI	GTMKAC	2 cut(s)	435, 1557
FokI	GGATG	5 cut(s)	646, 1423, 1751, 1988, 2035
FriOI	GRGCYC	4 cut(s)	191, 382, 3156, 3254
FspBI	CTAG	9 cut(s)	20, 596, 1407, 1716, 1778, 2291, 2372, 2514, 3257
GlaI	GCGC	4 cut(s)	68, 512, 3230, 3232
GsaI	CCCAGC	3 cut(s)	67, 160, 3270
GsuI	CTGGAG	7 cut(s)	23, 79, 271, 396, 1334, 1707, 2609
HaeIII	GGCC	3 cut(s)	497, 546, 1151
HapII	CCGG	5 cut(s)	382, 491, 1066, 1331, 3310
HgaI	GACGC	1 cut(s)	3308
HhaI	GCGC	4 cut(s)	69, 513, 3231, 3233
Hin1I	GRCGYC	2 cut(s)	2144, 3319
Hin6I	GCGC	4 cut(s)	67, 511, 3229, 3231
HinP1I	GCGC	4 cut(s)	67, 511, 3229, 3231
HincII	GTYRAC	2 cut(s)	436, 1504
HindII	GTYRAC	2 cut(s)	436, 1504
HindIII	AAGCTT	1 cut(s)	1920
HpaII	CCGG	5 cut(s)	382, 491, 1066, 1331, 3310
HphI	GGTGA	6 cut(s)	422, 743, 1580, 2566, 3087, 3255
Hpy166II	GTNNAC	9 cut(s)	247, 271, 436, 1504, 1558, 2342, 2350, 2414, 2660
Hpy8I	GTNNAC	9 cut(s)	247, 271, 436, 1504, 1558, 2342, 2350, 2414, 2660
Hpy99I	CGWCG	9 cut(s)	122, 254, 257, 392, 437, 440, 526, 3036, 3324
HpyCH4III	ACNGT	5 cut(s)	561, 1294, 2267, 2424, 2511
HpyCH4IV	ACGT	6 cut(s)	129, 432, 1192, 1391, 1435, 2144
HpySE526I	ACGT	6 cut(s)	129, 432, 1192, 1391, 1435, 2144
Hsp92I	GRCGYC	2 cut(s)	2144, 3319
HspAI	GCGC	4 cut(s)	67, 511, 3229, 3231
Kpn2I	TCCGGA	1 cut(s)	1065
Ksp22I	TGATCA	1 cut(s)	2619
KspI	CCGCGG	1 cut(s)	177
LmnI	GCTCC	7 cut(s)	55, 377, 1309, 1315, 1948, 2590, 2669
MaeI	CTAG	9 cut(s)	20, 596, 1407, 1716, 1778, 2291, 2372, 2514, 3257
MaeII	ACGT	6 cut(s)	129, 432, 1192, 1391, 1435, 2144
MaeIII	GTNAC	7 cut(s)	1431, 1957, 2712, 2961, 2998, 3093, 3138
MfeI	CAATTG	2 cut(s)	836, 882
MflI	RGATCY	2 cut(s)	1258, 3293
MhlI	GDGCHC	4 cut(s)	191, 382, 3156, 3254
MlyI	GAGTC	9 cut(s)	269, 296, 905, 1331, 2234, 2957, 3157, 3200, 3200
MmeI	TCCRAC	6 cut(s)	756, 1729, 1771, 1962, 2628, 2751
Mph1103I	ATGCAT	1 cut(s)	1224
MroI	TCCGGA	1 cut(s)	1065
MroXI	GAANNNNTTC	1 cut(s)	1923
MslI	CAYNNNNRTG	1 cut(s)	2792
MspA1I	CMGCKG	2 cut(s)	176, 291
MspCI	CTTAAG	1 cut(s)	625
MspI	CCGG	5 cut(s)	382, 491, 1066, 1331, 3310
MspR9I	CCNGG	9 cut(s)	313, 382, 383, 417, 1331, 2400, 2588, 3021, 3310
MunI	CAATTG	2 cut(s)	836, 882
Mva1269I	GAATGC	4 cut(s)	992, 1056, 2126, 2787
MvaI	CCWGG	5 cut(s)	313, 417, 2400, 2588, 3021
MvnI	CGCG	5 cut(s)	69, 176, 745, 3045, 3231
NciI	CCSGG	4 cut(s)	382, 383, 1331, 3310
NheI	GCTAGC	1 cut(s)	1715
NlaIV	GGNNCC	5 cut(s)	379, 1064, 1317, 2067, 3295
NmuCI	GTSAC	2 cut(s)	2998, 3093
NsiI	ATGCAT	1 cut(s)	1224
NspI	RCATGY	5 cut(s)	277, 1240, 1917, 2741, 3183
NspV	TTCGAA	1 cut(s)	1969
PaeI	GCATGC	3 cut(s)	1240, 1917, 2741
PaeR7I	CTCGAG	1 cut(s)	3155
PagI	TCATGA	3 cut(s)	1399, 1846, 2830
PaqCI	CACCTGC	1 cut(s)	2686
PauI	GCGCGC	1 cut(s)	3229
PcsI	WCGNNNNNNNCGW	4 cut(s)	126, 261, 460, 469
PctI	GAATGC	4 cut(s)	992, 1056, 2126, 2787
PdmI	GAANNNNTTC	1 cut(s)	1923
PflFI	GACNNNGTC	1 cut(s)	2243
PfoI	TCCNGGA	2 cut(s)	2586, 3308
PinAI	ACCGGT	1 cut(s)	490
PleI	GAGTC	9 cut(s)	268, 296, 904, 1330, 2234, 2956, 3157, 3199, 3200
PpsI	GAGTC	9 cut(s)	268, 296, 904, 1330, 2234, 2956, 3157, 3199, 3200
Ppu21I	YACGTR	1 cut(s)	1436
PpuMI	RGGWCCY	1 cut(s)	2584
Psp124BI	GAGCTC	1 cut(s)	3156
Psp5II	RGGWCCY	1 cut(s)	2584
Psp6I	CCWGG	5 cut(s)	311, 415, 2398, 2586, 3019
PspFI	CCCAGC	3 cut(s)	63, 156, 3266
PspGI	CCWGG	5 cut(s)	311, 415, 2398, 2586, 3019
PspN4I	GGNNCC	5 cut(s)	379, 1064, 1317, 2067, 3295
PspPI	GGNCC	5 cut(s)	496, 544, 1038, 2411, 2584
PspPPI	RGGWCCY	1 cut(s)	2584
PstI	CTGCAG	2 cut(s)	769, 828
PstNI	CAGNNNCTG	1 cut(s)	2678
PsuI	RGATCY	2 cut(s)	1258, 3293
PsyI	GACNNNGTC	1 cut(s)	2243
PteI	GCGCGC	1 cut(s)	3229
RseI	CAYNNNNRTG	1 cut(s)	2792
SacI	GAGCTC	1 cut(s)	3156
SacII	CCGCGG	1 cut(s)	177
SalI	GTCGAC	1 cut(s)	434
Sau96I	GGNCC	5 cut(s)	496, 544, 1038, 2411, 2584
ScaI	AGTACT	2 cut(s)	1763, 2903
SchI	GAGTC	9 cut(s)	269, 296, 905, 1331, 2234, 2957, 3157, 3200, 3200
ScrFI	CCNGG	9 cut(s)	313, 382, 383, 417, 1331, 2400, 2588, 3021, 3310
SduI	GDGCHC	4 cut(s)	191, 382, 3156, 3254
SfcI	CTRYAG	4 cut(s)	765, 824, 1055, 2507
Sfr274I	CTCGAG	1 cut(s)	3155
Sfr303I	CCGCGG	1 cut(s)	177
SfuI	TTCGAA	1 cut(s)	1969
SgrAI	CRCCGGYG	1 cut(s)	490
SgrBI	CCGCGG	1 cut(s)	177
SgrDI	CGTCGACG	1 cut(s)	434
SinI	GGWCC	3 cut(s)	1038, 2411, 2584
SlaI	CTCGAG	1 cut(s)	3155
SmaI	CCCGGG	1 cut(s)	383
SmiI	ATTTAAAT	1 cut(s)	1347
SmiMI	CAYNNNNRTG	1 cut(s)	2792
SmlI	CTYRAG	7 cut(s)	625, 1020, 1379, 1853, 2891, 2897, 3155
SmoI	CTYRAG	7 cut(s)	625, 1020, 1379, 1853, 2891, 2897, 3155
SphI	GCATGC	3 cut(s)	1240, 1917, 2741
SspI	AATATT	1 cut(s)	1867
SspMI	CTAG	9 cut(s)	20, 596, 1407, 1716, 1778, 2291, 2372, 2514, 3257
SstI	GAGCTC	1 cut(s)	3156
StyD4I	CCNGG	9 cut(s)	311, 380, 381, 415, 1329, 2398, 2586, 3019, 3308
StyI	CCWWGG	4 cut(s)	398, 595, 663, 1045
SwaI	ATTTAAAT	1 cut(s)	1347
TaaI	ACNGT	5 cut(s)	561, 1294, 2267, 2424, 2511
TaiI	ACGT	6 cut(s)	132, 435, 1195, 1394, 1438, 2147
TaqI	TCGA	9 cut(s)	435, 1157, 1200, 1369, 1949, 1969, 2907, 3156, 3322
TatI	WGTACW	8 cut(s)	1088, 1140, 1618, 1761, 2347, 2481, 2659, 2901
TauI	GCSGC	6 cut(s)	142, 176, 179, 238, 294, 345
TscAI	CASTG	5 cut(s)	115, 766, 1299, 1675, 2995
TseFI	GTSAC	2 cut(s)	2998, 3093
Tsp45I	GTSAC	2 cut(s)	2998, 3093
TspDTI	ATGAA	8 cut(s)	312, 1416, 1755, 1797, 1835, 2819, 2847, 3231
TspGWI	ACGGA	4 cut(s)	141, 925, 1030, 1751
TspMI	CCCGGG	1 cut(s)	381
TspRI	CASTG	5 cut(s)	115, 766, 1299, 1675, 2995
Tth111I	GACNNNGTC	1 cut(s)	2243
Vha464I	CTTAAG	1 cut(s)	625
VpaK11BI	GGWCC	3 cut(s)	1038, 2411, 2584
XagI	CCTNNNNNAGG	1 cut(s)	23
XapI	RAATTY	5 cut(s)	719, 1365, 1676, 2232, 2614
XbaI	TCTAGA	2 cut(s)	1777, 2290
XceI	RCATGY	5 cut(s)	277, 1240, 1917, 2741, 3183
XhoI	CTCGAG	1 cut(s)	3155
XmaI	CCCGGG	1 cut(s)	381
XmaJI	CCTAGG	1 cut(s)	595
XmiI	GTMKAC	2 cut(s)	435, 1557
XmnI	GAANNNNTTC	1 cut(s)	1923
XspI	CTAG	9 cut(s)	20, 596, 1407, 1716, 1778, 2291, 2372, 2514, 3257
ZraI	GACGTC	1 cut(s)	2145
ZrmI	AGTACT	2 cut(s)	1763, 2903
Zsp2I	ATGCAT	1 cut(s)	1224

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.