protease Do-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G27660 AT5G27660 |
| fragaria_vesca | FvH4_6g06410 FvH4_6g06410 FvH4_6g06410 FvH4_6g06410 FvH4_6g06420 FvH4_7g05300 |
| malus_domestica | MD04G1201900.v1.1 MD12G1215600.v1.1 |
| prunus_persica | Prupe.6G322200_v2.0.a1 |
| pyrus_communis | pycom04g17810 pycom12g20150 |
| rosa_chinensis | RchiOBHm_Chr3g0455481 |
| rosa_laevigata | RLG00000025355 RLG00000025356 |
| rosa_multiflora | Rmu_sc0010428.1_g000005 Rmu_sc0016199.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00424220 |
| rosa_rugosa | Rorug03G0007900 |
| rosa_samantha | Rh3AG067400 Rh3AG067500 Rh3BG069700 Rh3BG069800 Rh3CG068200 Rh3CG068300 Rh3DG069800 Rh3DG069900 |
| rosa_wichuraiana | Rw3G005340 Rw3G005350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1195 |
| Acc36I | ACCTGC | 1 cut(s) | 1195 |
| AccB1I | GGYRCC | 1 cut(s) | 770 |
| AccII | CGCG | 1 cut(s) | 230 |
| AccIII | TCCGGA | 1 cut(s) | 376 |
| AciI | CCGC | 9 cut(s) | 194, 225, 228, 230, 251, 413, 474, 835, 868 |
| AclWI | GGATC | 2 cut(s) | 580, 711 |
| AcoI | YGGCCR | 2 cut(s) | 191, 323 |
| AcsI | RAATTY | 3 cut(s) | 10, 910, 1226 |
| AcuI | CTGAAG | 1 cut(s) | 1097 |
| AfaI | GTAC | 7 cut(s) | 249, 688, 878, 972, 1002, 1164, 1293 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 147, 148, 383, 793, 1070 |
| AflIII | ACRYGT | 1 cut(s) | 593 |
| AgsI | TTSAA | 3 cut(s) | 23, 515, 1300 |
| AjnI | CCWGG | 4 cut(s) | 106, 790, 1177, 1210 |
| AluBI | AGCT | 2 cut(s) | 632, 1114 |
| AluI | AGCT | 2 cut(s) | 632, 1114 |
| Alw21I | GWGCWC | 2 cut(s) | 601, 1035 |
| Alw44I | GTGCAC | 1 cut(s) | 597 |
| AlwI | GGATC | 2 cut(s) | 580, 711 |
| Ama87I | CYCGRG | 3 cut(s) | 141, 201, 904 |
| Aor13HI | TCCGGA | 1 cut(s) | 376 |
| AoxI | GGCC | 5 cut(s) | 191, 323, 471, 487, 1061 |
| ApaLI | GTGCAC | 1 cut(s) | 597 |
| ApeKI | GCWGC | 2 cut(s) | 307, 977 |
| ApoI | RAATTY | 3 cut(s) | 10, 910, 1226 |
| AspLEI | GCGC | 1 cut(s) | 896 |
| AspS9I | GGNCC | 4 cut(s) | 91, 232, 488, 920 |
| AsuC2I | CCSGG | 2 cut(s) | 905, 906 |
| AsuHPI | GGTGA | 5 cut(s) | 179, 706, 1176, 1226, 1345 |
| AvaI | CYCGRG | 3 cut(s) | 141, 201, 904 |
| AvaII | GGWCC | 3 cut(s) | 91, 232, 920 |
| BaeGI | GKGCMC | 2 cut(s) | 601, 773 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 678, 711 |
| BalI | TGGCCA | 1 cut(s) | 325 |
| BanI | GGYRCC | 1 cut(s) | 770 |
| BanII | GRGCYC | 1 cut(s) | 425 |
| Bbv12I | GWGCWC | 2 cut(s) | 601, 1035 |
| BbvI | GCAGC | 2 cut(s) | 294, 964 |
| BccI | CCATC | 7 cut(s) | 59, 572, 662, 763, 932, 1226, 1324 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 653, 687 |
| BciT130I | CCWGG | 4 cut(s) | 108, 792, 1179, 1212 |
| BcnI | CCSGG | 2 cut(s) | 905, 906 |
| BfaI | CTAG | 1 cut(s) | 926 |
| BfmI | CTRYAG | 4 cut(s) | 408, 436, 723, 804 |
| BfuAI | ACCTGC | 1 cut(s) | 1195 |
| BisI | GCNGC | 6 cut(s) | 194, 225, 228, 308, 474, 978 |
| BlpI | GCTNAGC | 1 cut(s) | 1191 |
| BlsI | GCNGC | 6 cut(s) | 195, 226, 229, 309, 475, 979 |
| BmcAI | AGTACT | 2 cut(s) | 878, 972 |
| Bme1390I | CCNGG | 6 cut(s) | 108, 792, 905, 906, 1179, 1212 |
| Bme18I | GGWCC | 3 cut(s) | 91, 232, 920 |
| BmeT110I | CYCGRG | 3 cut(s) | 141, 201, 904 |
| BmgT120I | GGNCC | 4 cut(s) | 91, 232, 488, 920 |
| BmiI | GGNNCC | 3 cut(s) | 369, 772, 921 |
| BmrFI | CCNGG | 6 cut(s) | 108, 792, 905, 906, 1179, 1212 |
| BmsI | GCATC | 1 cut(s) | 1260 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1143, 1175 |
| BpmI | CTGGAG | 1 cut(s) | 692 |
| Bpu10I | CCTNAGC | 1 cut(s) | 215 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1191 |
| BpuEI | CTTGAG | 1 cut(s) | 760 |
| BpuMI | CCSGG | 2 cut(s) | 905, 906 |
| BsaJI | CCNNGG | 9 cut(s) | 107, 228, 287, 311, 791, 904, 905, 1064, 1178 |
| BsaWI | WCCGGW | 1 cut(s) | 376 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1269, 1299 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 147, 148, 383, 793, 1070 |
| Bse118I | RCCGGY | 1 cut(s) | 189 |
| Bse1I | ACTGG | 2 cut(s) | 326, 709 |
| BseAI | TCCGGA | 1 cut(s) | 376 |
| BseBI | CCWGG | 4 cut(s) | 108, 792, 1179, 1212 |
| BseDI | CCNNGG | 9 cut(s) | 107, 228, 287, 311, 791, 904, 905, 1064, 1178 |
| BseGI | GGATG | 5 cut(s) | 51, 123, 397, 583, 943 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 147, 148, 383, 793, 1070 |
| BseMII | CTCAG | 4 cut(s) | 229, 617, 1124, 1182 |
| BseNI | ACTGG | 2 cut(s) | 326, 709 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BseSI | GKGCMC | 2 cut(s) | 601, 773 |
| BseX3I | CGGCCG | 1 cut(s) | 191 |
| BseXI | GCAGC | 2 cut(s) | 294, 964 |
| BseYI | CCCAGC | 1 cut(s) | 1199 |
| BsgI | GTGCAG | 1 cut(s) | 267 |
| Bsh1236I | CGCG | 1 cut(s) | 230 |
| Bsh1285I | CGRYCG | 1 cut(s) | 194 |
| BshFI | GGCC | 5 cut(s) | 193, 325, 473, 489, 1063 |
| BshNI | GGYRCC | 1 cut(s) | 770 |
| BsiEI | CGRYCG | 1 cut(s) | 194 |
| BsiHKAI | GWGCWC | 2 cut(s) | 601, 1035 |
| BsiHKCI | CYCGRG | 3 cut(s) | 141, 201, 904 |
| BsiSI | CCGG | 3 cut(s) | 190, 377, 905 |
| BslFI | GGGAC | 1 cut(s) | 933 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 147, 148, 383, 793, 1070 |
| BsmFI | GGGAC | 1 cut(s) | 933 |
| BsnI | GGCC | 5 cut(s) | 193, 325, 473, 489, 1063 |
| BsoBI | CYCGRG | 3 cut(s) | 141, 201, 904 |
| Bsp1286I | GDGCHC | 4 cut(s) | 425, 601, 773, 1035 |
| Bsp13I | TCCGGA | 1 cut(s) | 376 |
| Bsp143I | GATC | 3 cut(s) | 585, 703, 732 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1191 |
| Bsp19I | CCATGG | 1 cut(s) | 287 |
| BspACI | CCGC | 9 cut(s) | 194, 225, 228, 230, 251, 413, 474, 835, 868 |
| BspANI | GGCC | 5 cut(s) | 193, 325, 473, 489, 1063 |
| BspCNI | CTCAG | 4 cut(s) | 228, 618, 1123, 1183 |
| BspEI | TCCGGA | 1 cut(s) | 376 |
| BspFNI | CGCG | 1 cut(s) | 230 |
| BspHI | TCATGA | 1 cut(s) | 963 |
| BspLI | GGNNCC | 3 cut(s) | 369, 772, 921 |
| BspMI | ACCTGC | 1 cut(s) | 1195 |
| BspPI | GGATC | 2 cut(s) | 580, 711 |
| BspQI | GCTCTTC | 1 cut(s) | 164 |
| BspT107I | GGYRCC | 1 cut(s) | 770 |
| BsrFI | RCCGGY | 1 cut(s) | 189 |
| BsrI | ACTGG | 2 cut(s) | 326, 709 |
| BssAI | RCCGGY | 1 cut(s) | 189 |
| BssECI | CCNNGG | 9 cut(s) | 107, 228, 287, 311, 791, 904, 905, 1064, 1178 |
| BssMI | GATC | 3 cut(s) | 585, 703, 732 |
| BssT1I | CCWWGG | 3 cut(s) | 287, 311, 1064 |
| Bst2UI | CCWGG | 4 cut(s) | 108, 792, 1179, 1212 |
| Bst4CI | ACNGT | 5 cut(s) | 46, 548, 691, 805, 1345 |
| Bst6I | CTCTTC | 3 cut(s) | 164, 516, 1307 |
| BstC8I | GCNNGC | 4 cut(s) | 813, 817, 1197, 1249 |
| BstDEI | CTNAG | 4 cut(s) | 215, 626, 1110, 1191 |
| BstDSI | CCRYGG | 2 cut(s) | 228, 287 |
| BstEII | GGTNACC | 1 cut(s) | 1182 |
| BstF5I | GGATG | 5 cut(s) | 51, 123, 397, 583, 943 |
| BstFNI | CGCG | 1 cut(s) | 230 |
| BstHHI | GCGC | 1 cut(s) | 896 |
| BstKTI | GATC | 3 cut(s) | 588, 706, 735 |
| BstMBI | GATC | 3 cut(s) | 585, 703, 732 |
| BstMCI | CGRYCG | 1 cut(s) | 194 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 298, 307, 313, 322, 473, 1196 |
| BstNI | CCWGG | 4 cut(s) | 108, 792, 1179, 1212 |
| BstNSI | RCATGY | 1 cut(s) | 605 |
| BstPI | GGTNACC | 1 cut(s) | 1182 |
| BstSCI | CCNGG | 6 cut(s) | 106, 790, 903, 904, 1177, 1210 |
| BstSFI | CTRYAG | 4 cut(s) | 408, 436, 723, 804 |
| BstSLI | GKGCMC | 2 cut(s) | 601, 773 |
| BstUI | CGCG | 1 cut(s) | 230 |
| BstV1I | GCAGC | 2 cut(s) | 294, 964 |
| BstX2I | RGATCY | 1 cut(s) | 703 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1027 |
| BstYI | RGATCY | 1 cut(s) | 703 |
| BstZI | CGGCCG | 1 cut(s) | 191 |
| BsuRI | GGCC | 5 cut(s) | 193, 325, 473, 489, 1063 |
| BtgI | CCRYGG | 2 cut(s) | 228, 287 |
| BtgZI | GCGATG | 1 cut(s) | 195 |
| BtsCI | GGATG | 5 cut(s) | 51, 123, 397, 583, 943 |
| BtsIMutI | CAGTG | 1 cut(s) | 1263 |
| BveI | ACCTGC | 1 cut(s) | 1195 |
| Cac8I | GCNNGC | 4 cut(s) | 813, 817, 1197, 1249 |
| CciI | TCATGA | 1 cut(s) | 963 |
| CfoI | GCGC | 1 cut(s) | 896 |
| Cfr10I | RCCGGY | 1 cut(s) | 189 |
| Cfr13I | GGNCC | 4 cut(s) | 91, 232, 488, 920 |
| Cfr42I | CCGCGG | 1 cut(s) | 231 |
| Cfr9I | CCCGGG | 1 cut(s) | 904 |
| Csp6I | GTAC | 7 cut(s) | 248, 687, 877, 971, 1001, 1163, 1292 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 30 |
| CviAII | CATG | 8 cut(s) | 79, 288, 432, 583, 602, 620, 820, 964 |
| CviQI | GTAC | 7 cut(s) | 248, 687, 877, 971, 1001, 1163, 1292 |
| DdeI | CTNAG | 4 cut(s) | 215, 626, 1110, 1191 |
| DpnI | GATC | 3 cut(s) | 587, 705, 734 |
| DpnII | GATC | 3 cut(s) | 585, 703, 732 |
| EaeI | YGGCCR | 2 cut(s) | 191, 323 |
| EagI | CGGCCG | 1 cut(s) | 191 |
| Eam1104I | CTCTTC | 3 cut(s) | 164, 516, 1307 |
| EarI | CTCTTC | 3 cut(s) | 164, 516, 1307 |
| EclXI | CGGCCG | 1 cut(s) | 191 |
| Eco130I | CCWWGG | 3 cut(s) | 287, 311, 1064 |
| Eco24I | GRGCYC | 1 cut(s) | 425 |
| Eco47I | GGWCC | 3 cut(s) | 91, 232, 920 |
| Eco52I | CGGCCG | 1 cut(s) | 191 |
| Eco57I | CTGAAG | 1 cut(s) | 1097 |
| Eco88I | CYCGRG | 3 cut(s) | 141, 201, 904 |
| Eco91I | GGTNACC | 1 cut(s) | 1182 |
| EcoO109I | RGGNCCY | 1 cut(s) | 920 |
| EcoO65I | GGTNACC | 1 cut(s) | 1182 |
| EcoRI | GAATTC | 1 cut(s) | 910 |
| EcoRII | CCWGG | 4 cut(s) | 106, 790, 1177, 1210 |
| EcoT14I | CCWWGG | 3 cut(s) | 287, 311, 1064 |
| EcoT38I | GRGCYC | 1 cut(s) | 425 |
| ErhI | CCWWGG | 3 cut(s) | 287, 311, 1064 |
| FaeI | CATG | 8 cut(s) | 82, 291, 435, 586, 605, 623, 823, 967 |
| FaqI | GGGAC | 1 cut(s) | 933 |
| FatI | CATG | 8 cut(s) | 78, 287, 431, 582, 601, 619, 819, 963 |
| FauI | CCCGC | 1 cut(s) | 406 |
| Fnu4HI | GCNGC | 6 cut(s) | 194, 225, 228, 308, 474, 978 |
| FokI | GGATG | 5 cut(s) | 38, 110, 404, 590, 950 |
| FriOI | GRGCYC | 1 cut(s) | 425 |
| Fsp4HI | GCNGC | 6 cut(s) | 194, 225, 228, 308, 474, 978 |
| FspBI | CTAG | 1 cut(s) | 926 |
| GlaI | GCGC | 1 cut(s) | 895 |
| GluI | GCNGC | 6 cut(s) | 194, 225, 228, 308, 474, 978 |
| GsaI | CCCAGC | 1 cut(s) | 1203 |
| GsuI | CTGGAG | 1 cut(s) | 692 |
| HaeIII | GGCC | 5 cut(s) | 193, 325, 473, 489, 1063 |
| HapII | CCGG | 3 cut(s) | 190, 377, 905 |
| HhaI | GCGC | 1 cut(s) | 896 |
| Hin1II | CATG | 8 cut(s) | 82, 291, 435, 586, 605, 623, 823, 967 |
| Hin6I | GCGC | 1 cut(s) | 894 |
| HinP1I | GCGC | 1 cut(s) | 894 |
| HincII | GTYRAC | 1 cut(s) | 832 |
| HindII | GTYRAC | 1 cut(s) | 832 |
| HinfI | GANTC | 8 cut(s) | 184, 257, 277, 296, 783, 1010, 1156, 1358 |
| HpaII | CCGG | 3 cut(s) | 190, 377, 905 |
| HphI | GGTGA | 5 cut(s) | 179, 706, 1176, 1226, 1345 |
| Hpy166II | GTNNAC | 6 cut(s) | 6, 134, 599, 782, 832, 863 |
| Hpy188I | TCNGA | 6 cut(s) | 74, 173, 183, 332, 675, 715 |
| Hpy188III | TCNNGA | 6 cut(s) | 59, 217, 377, 558, 964, 1309 |
| Hpy8I | GTNNAC | 6 cut(s) | 6, 134, 599, 782, 832, 863 |
| Hpy99I | CGWCG | 1 cut(s) | 243 |
| HpyAV | CCTTC | 8 cut(s) | 17, 173, 381, 382, 501, 640, 761, 1294 |
| HpyCH4III | ACNGT | 5 cut(s) | 46, 548, 691, 805, 1345 |
| HpyCH4IV | ACGT | 3 cut(s) | 130, 241, 593 |
| HpyCH4V | TGCA | 5 cut(s) | 284, 467, 599, 664, 1247 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 298, 307, 313, 322, 473, 1196 |
| HpyF3I | CTNAG | 4 cut(s) | 215, 626, 1110, 1191 |
| HpySE526I | ACGT | 3 cut(s) | 130, 241, 593 |
| Hsp92II | CATG | 8 cut(s) | 82, 291, 435, 586, 605, 623, 823, 967 |
| HspAI | GCGC | 1 cut(s) | 894 |
| Kpn2I | TCCGGA | 1 cut(s) | 376 |
| KspI | CCGCGG | 1 cut(s) | 231 |
| Kzo9I | GATC | 3 cut(s) | 585, 703, 732 |
| LguI | GCTCTTC | 1 cut(s) | 164 |
| LmnI | GCTCC | 2 cut(s) | 373, 1030 |
| Lsp1109I | GCAGC | 2 cut(s) | 294, 964 |
| LweI | GCATC | 1 cut(s) | 1260 |
| MaeI | CTAG | 1 cut(s) | 926 |
| MaeII | ACGT | 3 cut(s) | 130, 241, 593 |
| MaeIII | GTNAC | 8 cut(s) | 35, 46, 205, 655, 1171, 1182, 1261, 1333 |
| MalI | GATC | 3 cut(s) | 587, 705, 734 |
| MboI | GATC | 3 cut(s) | 585, 703, 732 |
| MboII | GAAGA | 5 cut(s) | 151, 252, 503, 1090, 1324 |
| MfeI | CAATTG | 3 cut(s) | 462, 1005, 1014 |
| MflI | RGATCY | 1 cut(s) | 703 |
| MhlI | GDGCHC | 4 cut(s) | 425, 601, 773, 1035 |
| MlsI | TGGCCA | 1 cut(s) | 325 |
| MluNI | TGGCCA | 1 cut(s) | 325 |
| MlyI | GAGTC | 3 cut(s) | 178, 777, 1004 |
| MmeI | TCCRAC | 5 cut(s) | 151, 161, 653, 811, 1267 |
| Mox20I | TGGCCA | 1 cut(s) | 325 |
| MroI | TCCGGA | 1 cut(s) | 376 |
| MscI | TGGCCA | 1 cut(s) | 325 |
| MseI | TTAA | 5 cut(s) | 65, 900, 957, 1038, 1224 |
| Msp20I | TGGCCA | 1 cut(s) | 325 |
| MspA1I | CMGCKG | 3 cut(s) | 230, 253, 476 |
| MspI | CCGG | 3 cut(s) | 190, 377, 905 |
| MspR9I | CCNGG | 6 cut(s) | 108, 792, 905, 906, 1179, 1212 |
| MunI | CAATTG | 3 cut(s) | 462, 1005, 1014 |
| MvaI | CCWGG | 4 cut(s) | 108, 792, 1179, 1212 |
| MvnI | CGCG | 1 cut(s) | 230 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 298, 307, 313, 322, 473, 1196 |
| NciI | CCSGG | 2 cut(s) | 905, 906 |
| NcoI | CCATGG | 1 cut(s) | 287 |
| NdeII | GATC | 3 cut(s) | 585, 703, 732 |
| NlaIII | CATG | 8 cut(s) | 82, 291, 435, 586, 605, 623, 823, 967 |
| NlaIV | GGNNCC | 3 cut(s) | 369, 772, 921 |
| NmeAIII | GCCGAG | 1 cut(s) | 344 |
| NmuCI | GTSAC | 3 cut(s) | 1182, 1261, 1333 |
| NspI | RCATGY | 1 cut(s) | 605 |
| PagI | TCATGA | 1 cut(s) | 963 |
| PaqCI | CACCTGC | 1 cut(s) | 1195 |
| PciSI | GCTCTTC | 1 cut(s) | 164 |
| PfeI | GAWTC | 5 cut(s) | 257, 277, 296, 1156, 1358 |
| PkrI | GCNGC | 6 cut(s) | 195, 226, 229, 309, 475, 979 |
| PleI | GAGTC | 3 cut(s) | 178, 777, 1004 |
| PpsI | GAGTC | 3 cut(s) | 178, 777, 1004 |
| PpuMI | RGGWCCY | 1 cut(s) | 920 |
| Psp5II | RGGWCCY | 1 cut(s) | 920 |
| Psp6I | CCWGG | 4 cut(s) | 106, 790, 1177, 1210 |
| PspEI | GGTNACC | 1 cut(s) | 1182 |
| PspFI | CCCAGC | 1 cut(s) | 1199 |
| PspGI | CCWGG | 4 cut(s) | 106, 790, 1177, 1210 |
| PspN4I | GGNNCC | 3 cut(s) | 369, 772, 921 |
| PspPI | GGNCC | 4 cut(s) | 91, 232, 488, 920 |
| PspPPI | RGGWCCY | 1 cut(s) | 920 |
| PsuI | RGATCY | 1 cut(s) | 703 |
| RsaI | GTAC | 7 cut(s) | 249, 688, 878, 972, 1002, 1164, 1293 |
| RsaNI | GTAC | 7 cut(s) | 248, 687, 877, 971, 1001, 1163, 1292 |
| SacII | CCGCGG | 1 cut(s) | 231 |
| SapI | GCTCTTC | 1 cut(s) | 164 |
| SaqAI | TTAA | 5 cut(s) | 65, 900, 957, 1038, 1224 |
| SatI | GCNGC | 6 cut(s) | 194, 225, 228, 308, 474, 978 |
| Sau3AI | GATC | 3 cut(s) | 585, 703, 732 |
| Sau96I | GGNCC | 4 cut(s) | 91, 232, 488, 920 |
| ScaI | AGTACT | 2 cut(s) | 878, 972 |
| SchI | GAGTC | 3 cut(s) | 178, 777, 1004 |
| ScrFI | CCNGG | 6 cut(s) | 108, 792, 905, 906, 1179, 1212 |
| SduI | GDGCHC | 4 cut(s) | 425, 601, 773, 1035 |
| SfaNI | GCATC | 1 cut(s) | 1260 |
| SfcI | CTRYAG | 4 cut(s) | 408, 436, 723, 804 |
| Sfr303I | CCGCGG | 1 cut(s) | 231 |
| SgrBI | CCGCGG | 1 cut(s) | 231 |
| SinI | GGWCC | 3 cut(s) | 91, 232, 920 |
| SmaI | CCCGGG | 1 cut(s) | 906 |
| SmlI | CTYRAG | 1 cut(s) | 775 |
| SmoI | CTYRAG | 1 cut(s) | 775 |
| SsiI | CCGC | 9 cut(s) | 194, 225, 228, 230, 251, 413, 474, 835, 868 |
| SspMI | CTAG | 1 cut(s) | 926 |
| StyD4I | CCNGG | 6 cut(s) | 106, 790, 903, 904, 1177, 1210 |
| StyI | CCWWGG | 3 cut(s) | 287, 311, 1064 |
| TaaI | ACNGT | 5 cut(s) | 46, 548, 691, 805, 1345 |
| TaiI | ACGT | 3 cut(s) | 133, 244, 596 |
| TaqI | TCGA | 1 cut(s) | 275 |
| TaqII | GACCGA | 1 cut(s) | 902 |
| TatI | WGTACW | 2 cut(s) | 876, 970 |
| TauI | GCSGC | 4 cut(s) | 196, 227, 230, 476 |
| TfiI | GAWTC | 5 cut(s) | 257, 277, 296, 1156, 1358 |
| Tru1I | TTAA | 5 cut(s) | 65, 900, 957, 1038, 1224 |
| Tru9I | TTAA | 5 cut(s) | 65, 900, 957, 1038, 1224 |
| TscAI | CASTG | 1 cut(s) | 1270 |
| TseFI | GTSAC | 3 cut(s) | 1182, 1261, 1333 |
| TseI | GCWGC | 2 cut(s) | 307, 977 |
| Tsp45I | GTSAC | 3 cut(s) | 1182, 1261, 1333 |
| TspDTI | ATGAA | 5 cut(s) | 252, 608, 624, 980, 1122 |
| TspGWI | ACGGA | 1 cut(s) | 44 |
| TspMI | CCCGGG | 1 cut(s) | 904 |
| TspRI | CASTG | 1 cut(s) | 1270 |
| VneI | GTGCAC | 1 cut(s) | 597 |
| VpaK11BI | GGWCC | 3 cut(s) | 91, 232, 920 |
| XapI | RAATTY | 3 cut(s) | 10, 910, 1226 |
| XceI | RCATGY | 1 cut(s) | 605 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 318 |
| XmaI | CCCGGG | 1 cut(s) | 904 |
| XspI | CTAG | 1 cut(s) | 926 |
| ZrmI | AGTACT | 2 cut(s) | 878, 972 |