Prupe.6G322200_v2.0.a1

protease Do-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
28440810 .. 28444335
3526 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G322200.1

Sequence Viewer

Length: 1251 bp
ATGAACCATTTTCTGAGAAAACTTTCAACCCCCAACCGGATTGTGGCCATTTCCGCCGCTGCAGGGTCGGTTTTATTGTACGCCAACGGCAACAGAAATTCCGATTACACGGCATCAGTGTCACTCCCTGCGCCATTGCGCGAATCGCTGTGGCTTCCATGGCAATCAGAGCTATCGGTTCCACTGTTTTCTCTGGGAAATAGTTCGGTTCCATCATCAGATATAAGCAAGGATGTTTCTGGTGTCTCAGCAGCTGGAGAGATACCAAAGACATGTAGTGGATGTTTGGGCAGAGATTCTTTTGCAAAAGCGGCTGCTAAGGTTGGTCCTGCTGTTGTCAACGTATCTGCTCCACAGGGTGAATTTGGGATCAGTCCTGGAAAGGGTATGGGCTCCGGAACTATTATTAACCAGGATGGTACGATTTTAACGTGTGCTCATGCTGTGGTTGATTTTCATGGGCTGAGAGCTTCATCAAAAGGGAAGGTTCATGTCACTTTGCAAGATGGTCGAACATTTGAGGGTACTGTGGTCAATGCGGATTTACAATCCGATGTTGCTATTGTAAAGATCAATTCTAAAACTCCACTACCAACAGCAAAGCTCGGCAGTTCAAGCAAGCTTCAGCCTGGGGATTGTGTGATAGCTGTTGGCTGTCCACTTTCGCTTCAGAATACAGTCACATCTGGTATTGTAAGTTGTGTTGACCGTAAAAGCACTGATTTGGGTCTTGGTGGATTGCGGAGAGAGTATTTACAGACGGATTGCGCAATCAATCCGGGAAATTCTGGGGGGCCTTTAGTTAATATTGACGGAGAGGTGATTGGTGTTAATATTATGAAAGTACTTGCTGCTGATGGATTGAGTTTTGCTGTACCGATTGATTCGGTCACCAAAATTCTGGACCATTTCAAGAGAAATGGGAGGGTTGTCCGGCCTTGGATTGGATTGAAGATGATTGATCTCAATGAGATGATCATCACCCAGCTTAAAGAAAGAGATCCTACATTCCCAAATGTGAAGAAAGGGATTCTTGTCCCCATGGTAACTCCTGGGTCACCTGCTGAACGTGCTGGGTTCCGTCCTGGTGATGTTGTTATTGAATTTGATGGAAAGGCTGTTGAAAGCATTAAGGAGATCATTGAAATAATGGGAGACCGAGTTGGGGTGCCCATCAAGGTAGTTGTGAAAAGAGCAAGAGATGAGTTGACTTTAACTGTAACTGCAGAGGAGTCGAATTCAGATATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

417

Amino Acids

43.75

Weight (kDa)

8.1

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1069
Acc16I TGCGCA 1 cut(s) 769
Acc36I ACCTGC 1 cut(s) 1069
AccB1I GGYRCC 1 cut(s) 1168
AccII CGCG 1 cut(s) 141
AccIII TCCGGA 1 cut(s) 395
AciI CCGC 5 cut(s) 54, 57, 311, 539, 742
AclWI GGATC 2 cut(s) 377, 995
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 6 cut(s) 97, 362, 784, 897, 1103, 1237
AcuI CTGAAG 2 cut(s) 608, 653
AdeI CACNNNGTG 1 cut(s) 359
AfaI GTAC 5 cut(s) 80, 421, 526, 846, 876
AfiI CCNNNNNNNGG 6 cut(s) 36, 43, 63, 383, 944, 1165
AflIII ACRYGT 2 cut(s) 272, 431
AgsI TTSAA 7 cut(s) 27, 615, 913, 952, 1103, 1124, 1145
AjnI CCWGG 5 cut(s) 376, 411, 628, 1051, 1084
AluBI AGCT 7 cut(s) 172, 254, 470, 604, 622, 647, 988
AluI AGCT 7 cut(s) 172, 254, 470, 604, 622, 647, 988
Alw21I GWGCWC 1 cut(s) 439
Alw26I GTCTC 2 cut(s) 250, 1149
AlwI GGATC 2 cut(s) 377, 995
AlwNI CAGNNNCTG 1 cut(s) 254
Aor13HI TCCGGA 1 cut(s) 395
AoxI GGCC 3 cut(s) 45, 794, 935
ApeKI GCWGC 4 cut(s) 59, 251, 314, 851
ApoI RAATTY 6 cut(s) 97, 362, 784, 897, 1103, 1237
Asp700I GAANNNNTTC 2 cut(s) 22, 202
AspLEI GCGC 3 cut(s) 133, 141, 770
AspS9I GGNCC 3 cut(s) 326, 794, 904
AsuC2I CCSGG 1 cut(s) 780
AsuHPI GGTGA 6 cut(s) 371, 832, 883, 973, 1050, 1100
AvaII GGWCC 2 cut(s) 326, 904
BaeGI GKGCMC 1 cut(s) 1173
BaeI ACNNNNGTAYC 2 cut(s) 516, 549
BalI TGGCCA 1 cut(s) 47
BanI GGYRCC 1 cut(s) 1168
BanII GRGCYC 1 cut(s) 395
Bbv12I GWGCWC 1 cut(s) 439
BbvI GCAGC 4 cut(s) 46, 263, 301, 838
BccI CCATC 6 cut(s) 220, 410, 500, 851, 1103, 1181
BceAI ACGGC 2 cut(s) 103, 126
BcgI CGANNNNNNTGC 4 cut(s) 491, 525, 1215, 1249
BciT130I CCWGG 5 cut(s) 378, 413, 630, 1053, 1086
BclI TGATCA 1 cut(s) 975
BcnI CCSGG 1 cut(s) 780
BcoDI GTCTC 2 cut(s) 250, 1149
BfmI CTRYAG 2 cut(s) 60, 1224
BfuAI ACCTGC 1 cut(s) 1069
BisI GCNGC 6 cut(s) 57, 60, 252, 312, 315, 852
BlsI GCNGC 6 cut(s) 58, 61, 253, 313, 316, 853
BmcAI AGTACT 1 cut(s) 846
Bme1390I CCNGG 6 cut(s) 378, 413, 630, 780, 1053, 1086
Bme18I GGWCC 2 cut(s) 326, 904
BmgT120I GGNCC 3 cut(s) 326, 794, 904
BmiI GGNNCC 6 cut(s) 180, 210, 394, 795, 1079, 1170
BmrFI CCNGG 6 cut(s) 378, 413, 630, 780, 1053, 1086
BmsI GCATC 1 cut(s) 122
BpmI CTGGAG 1 cut(s) 276
Bpu10I CCTNAGC 1 cut(s) 318
BpuMI CCSGG 1 cut(s) 780
BsaBI GATNNNNATC 1 cut(s) 977
BsaI GGTCTC 1 cut(s) 1149
BsaJI CCNNGG 5 cut(s) 158, 629, 938, 1041, 1052
BsaWI WCCGGW 2 cut(s) 36, 395
BsaXI ACNNNNNCTCC 2 cut(s) 1146, 1176
Bsc4I CCNNNNNNNGG 6 cut(s) 36, 43, 63, 383, 944, 1165
Bse3DI GCAATG 1 cut(s) 134
Bse8I GATNNNNATC 1 cut(s) 977
BseAI TCCGGA 1 cut(s) 395
BseBI CCWGG 5 cut(s) 378, 413, 630, 1053, 1086
BseDI CCNNGG 5 cut(s) 158, 629, 938, 1041, 1052
BseGI GGATG 3 cut(s) 238, 287, 421
BseJI GATNNNNATC 1 cut(s) 977
BseLI CCNNNNNNNGG 6 cut(s) 36, 43, 63, 383, 944, 1165
BseMI GCAATG 1 cut(s) 134
BseMII CTCAG 3 cut(s) 5, 261, 455
BseRI GAGGAG 1 cut(s) 1244
BseSI GKGCMC 1 cut(s) 1173
BseXI GCAGC 4 cut(s) 46, 263, 301, 838
BseYI CCCAGC 2 cut(s) 984, 1073
Bsh1236I CGCG 1 cut(s) 141
BshFI GGCC 3 cut(s) 47, 796, 937
BshNI GGYRCC 1 cut(s) 1168
BsiHKAI GWGCWC 1 cut(s) 439
BsiSI CCGG 4 cut(s) 37, 396, 779, 934
BslFI GGGAC 1 cut(s) 1022
BslI CCNNNNNNNGG 6 cut(s) 36, 43, 63, 383, 944, 1165
BsmAI GTCTC 2 cut(s) 250, 1149
BsmFI GGGAC 1 cut(s) 1022
BsnI GGCC 3 cut(s) 47, 796, 937
Bso31I GGTCTC 1 cut(s) 1149
Bsp1286I GDGCHC 3 cut(s) 395, 439, 1173
Bsp13I TCCGGA 1 cut(s) 395
Bsp143I GATC 6 cut(s) 369, 570, 961, 975, 1000, 1137
Bsp19I CCATGG 2 cut(s) 158, 1041
BspACI CCGC 5 cut(s) 54, 57, 311, 539, 742
BspANI GGCC 3 cut(s) 47, 796, 937
BspCNI CTCAG 3 cut(s) 6, 260, 456
BspEI TCCGGA 1 cut(s) 395
BspFNI CGCG 1 cut(s) 141
BspLI GGNNCC 6 cut(s) 180, 210, 394, 795, 1079, 1170
BspMAI CTGCAG 2 cut(s) 64, 1228
BspMI ACCTGC 1 cut(s) 1069
BspPI GGATC 2 cut(s) 377, 995
BspT107I GGYRCC 1 cut(s) 1168
BspTNI GGTCTC 1 cut(s) 1149
BsrDI GCAATG 1 cut(s) 134
BssECI CCNNGG 5 cut(s) 158, 629, 938, 1041, 1052
BssMI GATC 6 cut(s) 369, 570, 961, 975, 1000, 1137
BssT1I CCWWGG 3 cut(s) 158, 938, 1041
Bst2UI CCWGG 5 cut(s) 378, 413, 630, 1053, 1086
Bst4CI ACNGT 5 cut(s) 186, 529, 679, 710, 1219
BstC8I GCNNGC 1 cut(s) 620
BstDEI CTNAG 4 cut(s) 14, 247, 318, 464
BstDSI CCRYGG 2 cut(s) 158, 1041
BstEII GGTNACC 2 cut(s) 889, 1056
BstF5I GGATG 3 cut(s) 238, 287, 421
BstFNI CGCG 1 cut(s) 141
BstHHI GCGC 3 cut(s) 133, 141, 770
BstKTI GATC 6 cut(s) 372, 573, 964, 978, 1003, 1140
BstMAI GTCTC 2 cut(s) 250, 1149
BstMBI GATC 6 cut(s) 369, 570, 961, 975, 1000, 1137
BstMWI GCNNNNNNNGC 7 cut(s) 53, 145, 160, 169, 311, 615, 1070
BstNI CCWGG 5 cut(s) 378, 413, 630, 1053, 1086
BstNSI RCATGY 1 cut(s) 276
BstPI GGTNACC 2 cut(s) 889, 1056
BstSCI CCNGG 6 cut(s) 376, 411, 628, 778, 1051, 1084
BstSFI CTRYAG 2 cut(s) 60, 1224
BstSLI GKGCMC 1 cut(s) 1173
BstUI CGCG 1 cut(s) 141
BstV1I GCAGC 4 cut(s) 46, 263, 301, 838
BstX2I RGATCY 1 cut(s) 1000
BstXI CCANNNNNNTGG 1 cut(s) 901
BstYI RGATCY 1 cut(s) 1000
BsuRI GGCC 3 cut(s) 47, 796, 937
BtgI CCRYGG 2 cut(s) 158, 1041
BtsCI GGATG 3 cut(s) 238, 287, 421
BtsIMutI CAGTG 3 cut(s) 123, 182, 717
BveI ACCTGC 1 cut(s) 1069
Cac8I GCNNGC 1 cut(s) 620
CaiI CAGNNNCTG 1 cut(s) 254
CfoI GCGC 3 cut(s) 133, 141, 770
Cfr13I GGNCC 3 cut(s) 326, 794, 904
Csp6I GTAC 5 cut(s) 79, 420, 525, 845, 875
CviAII CATG 6 cut(s) 159, 273, 440, 458, 491, 1042
CviQI GTAC 5 cut(s) 79, 420, 525, 845, 875
DdeI CTNAG 4 cut(s) 14, 247, 318, 464
DpnI GATC 6 cut(s) 371, 572, 963, 977, 1002, 1139
DpnII GATC 6 cut(s) 369, 570, 961, 975, 1000, 1137
DraIII CACNNNGTG 1 cut(s) 359
EaeI YGGCCR 1 cut(s) 45
EciI GGCGGA 1 cut(s) 43
Eco130I CCWWGG 3 cut(s) 158, 938, 1041
Eco24I GRGCYC 1 cut(s) 395
Eco31I GGTCTC 1 cut(s) 1149
Eco47I GGWCC 2 cut(s) 326, 904
Eco57I CTGAAG 2 cut(s) 608, 653
Eco91I GGTNACC 2 cut(s) 889, 1056
EcoO109I RGGNCCY 1 cut(s) 794
EcoO65I GGTNACC 2 cut(s) 889, 1056
EcoRI GAATTC 1 cut(s) 1237
EcoRII CCWGG 5 cut(s) 376, 411, 628, 1051, 1084
EcoT14I CCWWGG 3 cut(s) 158, 938, 1041
EcoT38I GRGCYC 1 cut(s) 395
ErhI CCWWGG 3 cut(s) 158, 938, 1041
FaeI CATG 6 cut(s) 162, 276, 443, 461, 494, 1045
FalI AAGNNNNNCTT 2 cut(s) 1017, 1049
FaqI GGGAC 1 cut(s) 1022
FatI CATG 6 cut(s) 158, 272, 439, 457, 490, 1041
FbaI TGATCA 1 cut(s) 975
Fnu4HI GCNGC 6 cut(s) 57, 60, 252, 312, 315, 852
FokI GGATG 3 cut(s) 245, 294, 428
FriOI GRGCYC 1 cut(s) 395
Fsp4HI GCNGC 6 cut(s) 57, 60, 252, 312, 315, 852
FspI TGCGCA 1 cut(s) 769
GlaI GCGC 3 cut(s) 132, 140, 769
GluI GCNGC 6 cut(s) 57, 60, 252, 312, 315, 852
GsaI CCCAGC 2 cut(s) 988, 1077
GsuI CTGGAG 1 cut(s) 276
HaeIII GGCC 3 cut(s) 47, 796, 937
HapII CCGG 4 cut(s) 37, 396, 779, 934
HhaI GCGC 3 cut(s) 133, 141, 770
Hin1II CATG 6 cut(s) 162, 276, 443, 461, 494, 1045
Hin6I GCGC 3 cut(s) 131, 139, 768
HinP1I GCGC 3 cut(s) 131, 139, 768
HincII GTYRAC 3 cut(s) 340, 706, 1209
HindII GTYRAC 3 cut(s) 340, 706, 1209
HindIII AAGCTT 1 cut(s) 620
HinfI GANTC 5 cut(s) 143, 296, 884, 1030, 1232
HpaII CCGG 4 cut(s) 37, 396, 779, 934
HphI GGTGA 6 cut(s) 371, 832, 883, 973, 1050, 1100
Hpy166II GTNNAC 4 cut(s) 340, 659, 706, 1209
Hpy188I TCNGA 7 cut(s) 15, 103, 169, 220, 553, 672, 1243
Hpy188III TCNNGA 3 cut(s) 396, 902, 913
Hpy8I GTNNAC 4 cut(s) 340, 659, 706, 1209
HpyAV CCTTC 1 cut(s) 478
HpyCH4III ACNGT 5 cut(s) 186, 529, 679, 710, 1219
HpyCH4IV ACGT 3 cut(s) 342, 431, 1069
HpyCH4V TGCA 4 cut(s) 62, 305, 502, 1226
HpyF10VI GCNNNNNNNGC 7 cut(s) 53, 145, 160, 169, 311, 615, 1070
HpyF3I CTNAG 4 cut(s) 14, 247, 318, 464
HpySE526I ACGT 3 cut(s) 342, 431, 1069
Hsp92II CATG 6 cut(s) 162, 276, 443, 461, 494, 1045
HspAI GCGC 3 cut(s) 131, 139, 768
Kpn2I TCCGGA 1 cut(s) 395
Ksp22I TGATCA 1 cut(s) 975
Kzo9I GATC 6 cut(s) 369, 570, 961, 975, 1000, 1137
LmnI GCTCC 2 cut(s) 355, 398
Lsp1109I GCAGC 4 cut(s) 46, 263, 301, 838
LweI GCATC 1 cut(s) 122
MaeII ACGT 3 cut(s) 342, 431, 1069
MaeIII GTNAC 7 cut(s) 120, 493, 679, 889, 1045, 1056, 1219
MalI GATC 6 cut(s) 371, 572, 963, 977, 1002, 1139
MboI GATC 6 cut(s) 369, 570, 961, 975, 1000, 1137
MboII GAAGA 2 cut(s) 964, 1033
MflI RGATCY 1 cut(s) 1000
MhlI GDGCHC 3 cut(s) 395, 439, 1173
MlsI TGGCCA 1 cut(s) 47
MluCI AATT 7 cut(s) 97, 362, 574, 784, 897, 1103, 1237
MluNI TGGCCA 1 cut(s) 47
MlyI GAGTC 1 cut(s) 1241
MnlI CCTC 4 cut(s) 514, 811, 918, 1222
Mox20I TGGCCA 1 cut(s) 47
MroI TCCGGA 1 cut(s) 395
MroXI GAANNNNTTC 2 cut(s) 22, 202
MscI TGGCCA 1 cut(s) 47
MseI TTAA 7 cut(s) 408, 428, 804, 831, 990, 1131, 1214
Msp20I TGGCCA 1 cut(s) 47
MspA1I CMGCKG 2 cut(s) 59, 254
MspI CCGG 4 cut(s) 37, 396, 779, 934
MspR9I CCNGG 6 cut(s) 378, 413, 630, 780, 1053, 1086
MvaI CCWGG 5 cut(s) 378, 413, 630, 1053, 1086
MvnI CGCG 1 cut(s) 141
MwoI GCNNNNNNNGC 7 cut(s) 53, 145, 160, 169, 311, 615, 1070
NciI CCSGG 1 cut(s) 780
NcoI CCATGG 2 cut(s) 158, 1041
NdeII GATC 6 cut(s) 369, 570, 961, 975, 1000, 1137
NlaIII CATG 6 cut(s) 162, 276, 443, 461, 494, 1045
NlaIV GGNNCC 6 cut(s) 180, 210, 394, 795, 1079, 1170
NmeAIII GCCGAG 1 cut(s) 585
NmuCI GTSAC 5 cut(s) 120, 493, 679, 889, 1056
NsbI TGCGCA 1 cut(s) 769
NspI RCATGY 1 cut(s) 276
PaqCI CACCTGC 1 cut(s) 1069
PciI ACATGT 1 cut(s) 272
PcsI WCGNNNNNNNCGW 1 cut(s) 428
PdmI GAANNNNTTC 2 cut(s) 22, 202
PfeI GAWTC 4 cut(s) 143, 296, 884, 1030
PfoI TCCNGGA 2 cut(s) 376, 778
PkrI GCNGC 6 cut(s) 58, 61, 253, 313, 316, 853
PleI GAGTC 1 cut(s) 1240
PpsI GAGTC 1 cut(s) 1240
PscI ACATGT 1 cut(s) 272
Psp6I CCWGG 5 cut(s) 376, 411, 628, 1051, 1084
PspEI GGTNACC 2 cut(s) 889, 1056
PspFI CCCAGC 2 cut(s) 984, 1073
PspGI CCWGG 5 cut(s) 376, 411, 628, 1051, 1084
PspN4I GGNNCC 6 cut(s) 180, 210, 394, 795, 1079, 1170
PspPI GGNCC 3 cut(s) 326, 794, 904
PstI CTGCAG 2 cut(s) 64, 1228
PstNI CAGNNNCTG 1 cut(s) 254
PsuI RGATCY 1 cut(s) 1000
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 5 cut(s) 80, 421, 526, 846, 876
RsaNI GTAC 5 cut(s) 79, 420, 525, 845, 875
SaqAI TTAA 7 cut(s) 408, 428, 804, 831, 990, 1131, 1214
SatI GCNGC 6 cut(s) 57, 60, 252, 312, 315, 852
Sau3AI GATC 6 cut(s) 369, 570, 961, 975, 1000, 1137
Sau96I GGNCC 3 cut(s) 326, 794, 904
ScaI AGTACT 1 cut(s) 846
SchI GAGTC 1 cut(s) 1241
ScrFI CCNGG 6 cut(s) 378, 413, 630, 780, 1053, 1086
SduI GDGCHC 3 cut(s) 395, 439, 1173
SfaNI GCATC 1 cut(s) 122
SfcI CTRYAG 2 cut(s) 60, 1224
SinI GGWCC 2 cut(s) 326, 904
Sse9I AATT 7 cut(s) 97, 362, 574, 784, 897, 1103, 1237
SsiI CCGC 5 cut(s) 54, 57, 311, 539, 742
SspI AATATT 2 cut(s) 808, 835
StyD4I CCNGG 6 cut(s) 376, 411, 628, 778, 1051, 1084
StyI CCWWGG 3 cut(s) 158, 938, 1041
TaaI ACNGT 5 cut(s) 186, 529, 679, 710, 1219
TaiI ACGT 3 cut(s) 345, 434, 1072
TaqI TCGA 2 cut(s) 511, 1235
TaqII GACCGA 2 cut(s) 877, 1173
TasI AATT 7 cut(s) 97, 362, 574, 784, 897, 1103, 1237
TatI WGTACW 1 cut(s) 844
TauI GCSGC 2 cut(s) 59, 314
TfiI GAWTC 4 cut(s) 143, 296, 884, 1030
Tru1I TTAA 7 cut(s) 408, 428, 804, 831, 990, 1131, 1214
Tru9I TTAA 7 cut(s) 408, 428, 804, 831, 990, 1131, 1214
TscAI CASTG 3 cut(s) 123, 189, 724
TseFI GTSAC 5 cut(s) 120, 493, 679, 889, 1056
TseI GCWGC 4 cut(s) 59, 251, 314, 851
Tsp45I GTSAC 5 cut(s) 120, 493, 679, 889, 1056
TspDTI ATGAA 5 cut(s) 17, 446, 462, 479, 854
TspGWI ACGGA 3 cut(s) 776, 828, 1070
TspRI CASTG 3 cut(s) 123, 189, 724
VpaK11BI GGWCC 2 cut(s) 326, 904
XapI RAATTY 6 cut(s) 97, 362, 784, 897, 1103, 1237
XceI RCATGY 1 cut(s) 276
XcmI CCANNNNNNNNNTGG 1 cut(s) 40
XmnI GAANNNNTTC 2 cut(s) 22, 202
ZrmI AGTACT 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.