Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0005507

Physical Location & Seq

Genomic Coordinates Reverse (-)

15842570 .. 15850067

Gene Structure 7498 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g19090.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3618 bp

ATGGGTGATGTGAAGATACCAAATTGGATAGAAGGGTTGCCATTGGCGCCTGAGTTTTATCCAACACATACTGAATTCGCAGACCCGATTGCTTATATATCGAAAATTGAGAAGGAAGCTAGTGAATTTGGTATTTGTAAGATTATCCCACCATTGCCAAGACCTTCGAAGAGATATGTTTTTAATAACTTGAATAAGTCACTTGCTAGGCGGCCTGAATTGGGTTGTGATTTGGTCCCTGGGAGTGATGGTGCTGTGACGAAAATGGGTGCTGCTGATGGTAGTAATGATGGGGAGGTTAGGGCAGTTTTTACTACTAGGCACCAAGAACTGGGGCAGAGTGTTCAAAGAGGGAAAGAGCCGACTGTTCAGGATCTGACATCATCTGGTGTTGCTAAGCAAGTGTGGCAGAGTGGGGAAGTTTATACTTTAGAGCAGTTCGAGTCCAAGGCAAGGACTTTTGCACGGAGCATTTTGGGTACAATTAGAGATGTTTCTCCATTAGTTATAGAGGCCATGTTTTGGAAGGCAGCTTCTGAGAAGCCGATATACATTGAGTATGCCAATGATGTGCCTGGGTCAGCTTTTGAGGAACCGGAAGGTGTGTTATTCTATTCACGTAGGCGGAGGAGGAAGAGGAATTCCTACCACAGAAGTGGACCAAACTCTGATAGCAAGAAAAGTGAAGTGATTAGAAGTTGTGAGAAAAACTCTCAAAATGGTGAAGTTGAGGAAGCTACCCCTAAAAATGTTTCTCCTACATGCTTAGAGGTACCAAAATCATCTGCTTCTCCGGGAATAGTGTCAACAGATGAGACTTCTCAATCTTCTAGGAAAAGAAGTCAAAATTCTTCTTGTGATATGGAAGGTACTGCTGGTTGGATGCTTTCAAACAGTCCATGGAACTTGCAAGTCATTGCACGCTCACCTGGTTCACTTACTCGTTTCATGCCGGATGATATCCCAGGTGTTACTTCTCCTATGGTTTATATTGGCATGTTATTCAGCTGGTTTGCTTGGCATGTTGAAGATCATGAGCTTCACAGCATGAATTTTCTGCACAATGGATCTGCAAAGACTTGGTATTCTGTTCCCGGAAATTATGCATTTGCTTTTGAGGAACTTATTCGTACTGAGGCATACGGTGGTACTGCCGACCGTCTAGCTGCTCTCTCACTATTGGGTAACAAAACAACTTTAATGTCACCTGAAGTAGTTATCGCATCCGGAATTCCATGTTGCAGGTTGATACAGAATCCTGGTGAATTTGTTGTGACTTTTCCAAGGGCTTACCATGTAGGATTCAGTCACGGTTTCAATTGTGGGGAAGCTGCTAACTTTGGAACACCCCAATGGCTAAAAGTTGCTAAAGAAGCTGCGGTACGTAGAGCTGCAATGAACTATCTTCCTATGCTCTCCCATCAACAGTTGTTATACCTCTCAACTATGTCTTTTATTTCAAGAGTGCCAAGAGCCCTGCTACCAGGTGTGCGGAGTTCCCGAATGAGAGATAGGCAAAAAGAAGACAGAGAGCTATCAGTAAAGAAGGCTTTCATTGAAGATATTTTAAATGAGAATGATGTGTTATCTGCTCTTCTTGGGAAAGAATCAAGTTGCCGTGCAGTATTATGGAACCCTGATTTACTTCCATATACAAGTAAAGAGTCTCCTATACCCACTGCGGGTGCTCCTGTTGATACAAATTCAAAAGAAAATGCTACGGATACTCAGGGTGGAAAAAGTACAAATGATCAGAACTCTCTGGTAGATGAGATGAGTTTGTACATGGAAAATCTCAATGATTTATATTTGGGCAGCGATGATCTGTCTAGTGACTTCCAAGTGGACTCCGGAACATTGGCATGTGTGGCATGTGGGATACTTGGGTTTCCATTTATGTCTGTGATGCAACCATCTGAGAAAGCCTCAACGGAACTTCAGCCTGAATATATTTTATCTGAAGAATTGCCAGGCAATTCTCATTTCTCTCCAGAGCTTCACGAAGCTTTCAAAGACTCTGCTACAGAGATTCTCTCTCCTATTTCCAATCCTTGCACAACAAGGTTTGACAATCATTGGAATATTGTCAATAAGTTTCTGAGGCCACGGAGTTTCTGTCTTGAACATGCTGTTGAAACTTTGGAGCTGTTGCAGTGTAAAGGTGGAGCAAACATGCTTGTGATTTGCCATTCTGACTATCAGAAAATAAAGGCTCCTGCTGGAGCCATTGCAGAGGAAATTGGTTGCCCTTTTAACTATAAAGAGGTTCCTTTGGACACTGCCTCAAAGGAAGATCTGAACTTGATAGATCTTGCTGTCGATGATGGTCGAGATGAATGTGGAGAGGATTGGACCTCAAAGTTGGGTATCAACCTACGGTACTGTGTCAAGGTCAGAAAAAGTTCTTCCTCAAAGCGAGTCCAGCATGCATTGGCATTGGGTGGAGCTCTCTCTACACAAAGTTGCAGCGCAGAATTTCTGACTGTTGACTGGAAATCTAGAAGATCTCGGACAAAGAAGGTTTATCTAGATGCCACTTACAAACAATGTCAGACCATTGAGAAAAAGAAGGAAGAAGTGGTGGAGGCAAAGTCAGCAGCTGCCGCCTCTTTTAAAAGTGAAGCAACAATAATTCAATATTCAAGAAGGAATAAGCGAAGACCAAGTACTTCTACAGGAGCAGGAAGAGTTGTTGAGCAACCTGCTACTTCTGAAGAGTTTGATAAACATGGCAGGAGGGCTTCAGATAGTAGCACTCACAACAATGGTAAGTCCACCAGCTTATGTGCAAGGTTGGACTCGTATGCATCGAAGAGTATGTCTGAAGTGCATCCTGATGTCCAGATGCTTGAAGCCACCAGGGATATCTGTTTGAACTCTCTTCCACAAGTTGCAGATAGAGTTGCCTTAACAGCTGGAAGTGCTGATAAACAGATTGAAAATCACAGTTTGGAAGAGAGGCAGATGAACAGTAGAGGTAGCAGTTTAGCAGCAAGTGAGTCTGATATGCAACATGAGATCAAGATCCTTGAAGAAGCCAGAGTGAATGACCCTATTACTCCGCTTGCCATTGCATGTGATGAAAGGTCTGAAAATAGAGAAAAGCAGGAAAACAGAAAATTGAACAAAAACGATGGCAACTGTAATTTGGTGTCTGAACGACAATCCCAACTGTGGGCTGAGGAGGATGTTCTTATGGACGTGGGTCCTGTTTTCACCGAATTAACAAATGTATGTACTGCTGACTCAATTGTGACAAGTTCTGAGGAACAGATGGGCAATGCAGTCATTGATAAATCTTGTGTGAATAGTGAAATTTGTGAATCCATCACCACTGCTACTGACAGAAGTAATAACAAGGCACCAGCTTCATATAATTCCACACTGAGTTCAAACCGGAAGAAGATATTGAGATTCCACAAGGAAGAAATGAAGATTCCAGTTTCAGTCATGCTAGAAGGATCAGGCAACCCTCTCCTGCTTGTACAGACAGATTGTCGGGAGTTCCAAGTACGATCTGTGCTGAAGCAGATTTTCATCGGGGCCCGACTTCACATATTCAAGAATTTCAGGCTGCAGATAGAAGTAGCGAGGGGGAATATATCTCTACTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003700 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009826 GO:0009889 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0014070 GO:0016043 GO:0016049 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0032451 GO:0032452 GO:0032502 GO:0032989 GO:0033169 GO:0033993 GO:0036211 GO:0040007 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045814 GO:0048519 GO:0048577 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048587 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0051276 GO:0060255 GO:0060560 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:0140110 GO:1901564 GO:1901700 GO:1903506 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

JmjC JmjN zf-C2H2

Protein Analysis

1206

Amino Acids

133.51

Weight (kDa)

5.88

Isoelectric Point (pI)

57.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC	PF02373	24 - 78	4.3e-15	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04240
fragaria_vesca	FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090
malus_domestica	MD01G1106000.v1.1 MD07G1172400.v1.1
prunus_persica	Prupe.2G211400_v2.0.a1 Prupe.2G211400_v2.0.a1
pyrus_communis	pycom01g13280 pycom07g16690
rosa_chinensis	RchiOBHm_Chr1g0362971
rosa_laevigata	RLG00000027605
rosa_multiflora	Rmu_sc0000174.1_g000009
rosa_roxburghii	Rroxscaffold_4G00293590
rosa_rugosa	Rorug01G0302900 Rorug01G0303000 Rorug01G0303100 Rorug01G0303200
rosa_samantha	Rh1AG312100 Rh1BG275600 Rh1CG292500 Rh1DG306300
rosa_wichuraiana	Rw1G027660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1233, 2710
Acc65I	GGTACC	1 cut(s)	772
AccB1I	GGYRCC	4 cut(s)	46, 321, 772, 3361
AccB7I	CCANNNNNTGG	2 cut(s)	331, 522
AccIII	TCCGGA	2 cut(s)	1226, 1850
AciI	CCGC	7 cut(s)	211, 625, 1379, 1492, 1682, 2604, 3062
AclWI	GGATC	4 cut(s)	381, 1075, 3019, 3469
AcuI	CTGAAG	8 cut(s)	1230, 1922, 1980, 2727, 2733, 2844, 3545, 3596
AcyI	GRCGYC	1 cut(s)	47
AfiI	CCNNNNNNNGG	7 cut(s)	221, 331, 453, 522, 1682, 3174, 3175
AhdI	GACNNNNNGTC	1 cut(s)	3495
AjiI	CACGTC	1 cut(s)	3202
AjnI	CCWGG	8 cut(s)	238, 574, 928, 964, 1258, 1483, 1969, 2858
AleI	CACNNNNGTG	1 cut(s)	654
Alw21I	GWGCWC	2 cut(s)	1690, 2449
Alw26I	GTCTC	2 cut(s)	809, 1671
AlwI	GGATC	4 cut(s)	381, 1075, 3019, 3469
AlwNI	CAGNNNCTG	3 cut(s)	376, 536, 2600
Aor13HI	TCCGGA	2 cut(s)	1226, 1850
AoxI	GGCC	4 cut(s)	212, 513, 2102, 3543
ApaI	GGGCCC	1 cut(s)	3547
ArsI	GACNNNNNNTTYG	2 cut(s)	2804, 2836
Asp700I	GAANNNNTTC	3 cut(s)	1125, 1550, 2401
Asp718I	GGTACC	1 cut(s)	772
AspLEI	GCGC	2 cut(s)	49, 2471
AspS9I	GGNCC	6 cut(s)	235, 659, 2352, 3206, 3543, 3544
AsuC2I	CCSGG	2 cut(s)	795, 1095
AsuHPI	GGTGA	7 cut(s)	17, 734, 918, 1197, 1274, 3208, 3322
AsuII	TTCGAA	1 cut(s)	167
AvaII	GGWCC	4 cut(s)	235, 659, 2352, 3206
BaeGI	GKGCMC	1 cut(s)	3547
BaeI	ACNNNNGTAYC	2 cut(s)	1871, 1904
BanI	GGYRCC	4 cut(s)	46, 321, 772, 3361
BanII	GRGCYC	3 cut(s)	1477, 2449, 3547
BarI	GAAGNNNNNNTAC	6 cut(s)	533, 565, 1365, 1397, 2650, 2682
BbsI	GAAGAC	2 cut(s)	1530, 2665
Bbv12I	GWGCWC	2 cut(s)	1690, 2449
BbvCI	CCTCAGC	1 cut(s)	3180
BccI	CCATC	9 cut(s)	242, 272, 284, 1428, 1921, 2318, 3128, 3268, 3335
BceAI	ACGGC	1 cut(s)	1602
BciT130I	CCWGG	8 cut(s)	240, 576, 930, 966, 1260, 1485, 1971, 2860
BciVI	GTATCC	2 cut(s)	1717, 1872
BclI	TGATCA	1 cut(s)	1750
BcnI	CCSGG	2 cut(s)	795, 1095
BcoDI	GTCTC	2 cut(s)	809, 1671
BfaI	CTAG	9 cut(s)	120, 207, 318, 831, 1163, 1830, 2499, 2528, 3455
BfmI	CTRYAG	3 cut(s)	2022, 2673, 3575
BfoI	RGCGCY	1 cut(s)	50
BfuAI	ACCTGC	2 cut(s)	1233, 2710
BfuI	GTATCC	2 cut(s)	1717, 1872
BglII	AGATCT	3 cut(s)	2293, 2308, 2504
BlpI	GCTNAGC	1 cut(s)	396
BmcAI	AGTACT	1 cut(s)	2668
Bme18I	GGWCC	4 cut(s)	235, 659, 2352, 3206
BmeRI	GACNNNNNGTC	1 cut(s)	3495
BmgBI	CACGTC	1 cut(s)	3202
BmgT120I	GGNCC	6 cut(s)	235, 659, 2352, 3206, 3543, 3544
BmrI	ACTGGG	1 cut(s)	341
BmsI	GCATC	7 cut(s)	873, 1232, 1896, 2521, 2816, 2835, 2839
BmuI	ACTGGG	1 cut(s)	341
BoxI	GACNNNNGTC	1 cut(s)	3204
BpiI	GAAGAC	2 cut(s)	1530, 2665
BplI	GAGNNNNNCTC	6 cut(s)	695, 727, 1910, 1942, 2018, 2050
BpmI	CTGGAG	2 cut(s)	1974, 2241
Bpu10I	CCTNAGC	1 cut(s)	3180
Bpu1102I	GCTNAGC	1 cut(s)	396
Bpu14I	TTCGAA	1 cut(s)	167
BpuMI	CCSGG	2 cut(s)	795, 1095
BsaAI	YACGTR	2 cut(s)	620, 1385
BsaBI	GATNNNNATC	2 cut(s)	3023, 3536
BsaHI	GRCGYC	1 cut(s)	47
BsaJI	CCNNGG	9 cut(s)	238, 239, 447, 575, 899, 964, 1283, 2105, 2859
BsaWI	WCCGGW	4 cut(s)	595, 1226, 1850, 3396
BsaXI	ACNNNNNCTCC	6 cut(s)	235, 265, 2101, 2131, 2576, 2606
Bsc4I	CCNNNNNNNGG	7 cut(s)	221, 331, 453, 522, 1682, 3174, 3175
Bse1I	ACTGG	3 cut(s)	336, 2495, 3440
Bse3DI	GCAATG	6 cut(s)	152, 915, 1401, 2226, 3069, 3286
Bse8I	GATNNNNATC	2 cut(s)	3023, 3536
BseAI	TCCGGA	2 cut(s)	1226, 1850
BseBI	CCWGG	8 cut(s)	240, 576, 930, 966, 1260, 1485, 1971, 2860
BseDI	CCNNGG	9 cut(s)	238, 239, 447, 575, 899, 964, 1283, 2105, 2859
BseGI	GGATG	5 cut(s)	888, 961, 1223, 2830, 3193
BseJI	GATNNNNATC	2 cut(s)	3023, 3536
BseLI	CCNNNNNNNGG	7 cut(s)	221, 331, 453, 522, 1682, 3174, 3175
BseMI	GCAATG	6 cut(s)	152, 915, 1401, 2226, 3069, 3286
BseMII	CTCAG	9 cut(s)	42, 528, 1125, 1742, 1908, 2090, 3171, 3255, 3377
BseNI	ACTGG	3 cut(s)	336, 2495, 3440
BseRI	GAGGAG	2 cut(s)	643, 3197
BseSI	GKGCMC	1 cut(s)	3547
BsgI	GTGCAG	2 cut(s)	1043, 1641
Bsh1285I	CGRYCG	1 cut(s)	1159
BshFI	GGCC	4 cut(s)	214, 515, 2104, 3545
BshNI	GGYRCC	4 cut(s)	46, 321, 772, 3361
BsiEI	CGRYCG	1 cut(s)	1159
BsiHKAI	GWGCWC	2 cut(s)	1690, 2449
BsiSI	CCGG	7 cut(s)	596, 794, 953, 1095, 1227, 1851, 3397
BslFI	GGGAC	1 cut(s)	221
BslI	CCNNNNNNNGG	7 cut(s)	221, 331, 453, 522, 1682, 3174, 3175
BsmAI	GTCTC	2 cut(s)	809, 1671
BsmFI	GGGAC	1 cut(s)	221
BsnI	GGCC	4 cut(s)	214, 515, 2104, 3545
Bsp119I	TTCGAA	1 cut(s)	167
Bsp120I	GGGCCC	1 cut(s)	3543
Bsp1286I	GDGCHC	4 cut(s)	1477, 1690, 2449, 3547
Bsp13I	TCCGGA	2 cut(s)	1226, 1850
Bsp1407I	TGTACA	2 cut(s)	1782, 3484
Bsp1720I	GCTNAGC	1 cut(s)	396
Bsp19I	CCATGG	1 cut(s)	899
BspACI	CCGC	7 cut(s)	211, 625, 1379, 1492, 1682, 2604, 3062
BspANI	GGCC	4 cut(s)	214, 515, 2104, 3545
BspCNI	CTCAG	9 cut(s)	43, 529, 1126, 1741, 1909, 2091, 3172, 3256, 3378
BspEI	TCCGGA	2 cut(s)	1226, 1850
BspHI	TCATGA	1 cut(s)	1033
BspMAI	CTGCAG	1 cut(s)	3579
BspMI	ACCTGC	2 cut(s)	1233, 2710
BspPI	GGATC	4 cut(s)	381, 1075, 3019, 3469
BspQI	GCTCTTC	1 cut(s)	1599
BspT104I	TTCGAA	1 cut(s)	167
BspT107I	GGYRCC	4 cut(s)	46, 321, 772, 3361
BsrDI	GCAATG	6 cut(s)	152, 915, 1401, 2226, 3069, 3286
BsrGI	TGTACA	2 cut(s)	1782, 3484
BsrI	ACTGG	3 cut(s)	336, 2495, 3440
BssECI	CCNNGG	9 cut(s)	238, 239, 447, 575, 899, 964, 1283, 2105, 2859
BssNI	GRCGYC	1 cut(s)	47
BssT1I	CCWWGG	3 cut(s)	447, 899, 1283
Bst2UI	CCWGG	8 cut(s)	240, 576, 930, 966, 1260, 1485, 1971, 2860
Bst6I	CTCTTC	8 cut(s)	164, 629, 1599, 2680, 2709, 2807, 2886, 2949
BstACI	GRCGYC	1 cut(s)	47
BstAUI	TGTACA	2 cut(s)	1782, 3484
BstBAI	YACGTR	2 cut(s)	620, 1385
BstBI	TTCGAA	1 cut(s)	167
BstC8I	GCNNGC	3 cut(s)	922, 2427, 3066
BstDSI	CCRYGG	2 cut(s)	899, 2105
BstF5I	GGATG	5 cut(s)	888, 961, 1223, 2830, 3193
BstH2I	RGCGCY	1 cut(s)	50
BstHHI	GCGC	2 cut(s)	49, 2471
BstMAI	GTCTC	2 cut(s)	809, 1671
BstMCI	CGRYCG	1 cut(s)	1159
BstMWI	GCNNNNNNNGC	9 cut(s)	46, 406, 1373, 1868, 2422, 2594, 2603, 2912, 2921
BstNI	CCWGG	8 cut(s)	240, 576, 930, 966, 1260, 1485, 1971, 2860
BstNSI	RCATGY	9 cut(s)	765, 1000, 1025, 1866, 1875, 2129, 2176, 2429, 3078
BstPAI	GACNNNNGTC	1 cut(s)	3204
BstSFI	CTRYAG	3 cut(s)	2022, 2673, 3575
BstSLI	GKGCMC	1 cut(s)	3547
BstSNI	TACGTA	1 cut(s)	1385
BstV2I	GAAGAC	2 cut(s)	1530, 2665
BstX2I	RGATCY	6 cut(s)	373, 1067, 2293, 2308, 2504, 3024
BstXI	CCANNNNNNTGG	1 cut(s)	656
BstYI	RGATCY	6 cut(s)	373, 1067, 2293, 2308, 2504, 3024
BsuI	GTATCC	2 cut(s)	1717, 1872
BsuRI	GGCC	4 cut(s)	214, 515, 2104, 3545
BtgI	CCRYGG	2 cut(s)	899, 2105
BtgZI	GCGATG	1 cut(s)	1833
BtrI	CACGTC	1 cut(s)	3202
BtsCI	GGATG	5 cut(s)	888, 961, 1223, 2830, 3193
BtsI	GCAGTG	4 cut(s)	1677, 2159, 2277, 3333
BtsIMutI	CAGTG	5 cut(s)	1677, 2159, 2277, 3333, 3383
BveI	ACCTGC	2 cut(s)	1233, 2710
Cac8I	GCNNGC	3 cut(s)	922, 2427, 3066
CaiI	CAGNNNCTG	3 cut(s)	376, 536, 2600
CciI	TCATGA	1 cut(s)	1033
CfoI	GCGC	2 cut(s)	49, 2471
Cfr13I	GGNCC	6 cut(s)	235, 659, 2352, 3206, 3543, 3544
CsiI	ACCWGGT	2 cut(s)	928, 1483
DinI	GGCGCC	1 cut(s)	48
DraI	TTTAAA	2 cut(s)	1569, 2614
DriI	GACNNNNNGTC	1 cut(s)	3495
Eam1104I	CTCTTC	8 cut(s)	164, 629, 1599, 2680, 2709, 2807, 2886, 2949
Eam1105I	GACNNNNNGTC	1 cut(s)	3495
EarI	CTCTTC	8 cut(s)	164, 629, 1599, 2680, 2709, 2807, 2886, 2949
EciI	GGCGGA	1 cut(s)	640
Ecl136II	GAGCTC	1 cut(s)	2447
Eco105I	TACGTA	1 cut(s)	1385
Eco130I	CCWWGG	3 cut(s)	447, 899, 1283
Eco24I	GRGCYC	3 cut(s)	1477, 2449, 3547
Eco32I	GATATC	2 cut(s)	961, 2866
Eco47I	GGWCC	4 cut(s)	235, 659, 2352, 3206
Eco53kI	GAGCTC	1 cut(s)	2447
Eco57I	CTGAAG	8 cut(s)	1230, 1922, 1980, 2727, 2733, 2844, 3545, 3596
EcoICRI	GAGCTC	1 cut(s)	2447
EcoO109I	RGGNCCY	2 cut(s)	3206, 3543
EcoRI	GAATTC	3 cut(s)	74, 640, 1230
EcoRII	CCWGG	8 cut(s)	238, 574, 928, 964, 1258, 1483, 1969, 2858
EcoRV	GATATC	2 cut(s)	961, 2866
EcoT14I	CCWWGG	3 cut(s)	447, 899, 1283
EcoT22I	ATGCAT	3 cut(s)	1108, 2431, 2809
EcoT38I	GRGCYC	3 cut(s)	1477, 2449, 3547
EgeI	GGCGCC	1 cut(s)	48
EheI	GGCGCC	1 cut(s)	48
ErhI	CCWWGG	3 cut(s)	447, 899, 1283
FaqI	GGGAC	1 cut(s)	221
FauI	CCCGC	1 cut(s)	1675
FbaI	TGATCA	1 cut(s)	1750
FokI	GGATG	5 cut(s)	895, 968, 1210, 2817, 3200
FriOI	GRGCYC	3 cut(s)	1477, 2449, 3547
FspBI	CTAG	9 cut(s)	120, 207, 318, 831, 1163, 1830, 2499, 2528, 3455
GlaI	GCGC	2 cut(s)	48, 2470
GsuI	CTGGAG	2 cut(s)	1974, 2241
HaeII	RGCGCY	1 cut(s)	50
HaeIII	GGCC	4 cut(s)	214, 515, 2104, 3545
HapII	CCGG	7 cut(s)	596, 794, 953, 1095, 1227, 1851, 3397
HhaI	GCGC	2 cut(s)	49, 2471
Hin1I	GRCGYC	1 cut(s)	47
Hin6I	GCGC	2 cut(s)	47, 2469
HinP1I	GCGC	2 cut(s)	47, 2469
HincII	GTYRAC	2 cut(s)	807, 2488
HindII	GTYRAC	2 cut(s)	807, 2488
HindIII	AAGCTT	1 cut(s)	2004
HpaII	CCGG	7 cut(s)	596, 794, 953, 1095, 1227, 1851, 3397
HphI	GGTGA	7 cut(s)	17, 734, 918, 1197, 1274, 3208, 3322
Hpy166II	GTNNAC	6 cut(s)	659, 807, 935, 1846, 2488, 2775
Hpy8I	GTNNAC	6 cut(s)	659, 807, 935, 1846, 2488, 2775
HpyCH4IV	ACGT	3 cut(s)	619, 1384, 3201
HpyF10VI	GCNNNNNNNGC	9 cut(s)	46, 406, 1373, 1868, 2422, 2594, 2603, 2912, 2921
HpySE526I	ACGT	3 cut(s)	619, 1384, 3201
Hsp92I	GRCGYC	1 cut(s)	47
HspAI	GCGC	2 cut(s)	47, 2469
KasI	GGCGCC	1 cut(s)	46
Kpn2I	TCCGGA	2 cut(s)	1226, 1850
KpnI	GGTACC	1 cut(s)	776
Ksp22I	TGATCA	1 cut(s)	1750
LguI	GCTCTTC	1 cut(s)	1599
LmnI	GCTCC	8 cut(s)	468, 1693, 2143, 2165, 2218, 2222, 2444, 2678
LweI	GCATC	7 cut(s)	873, 1232, 1896, 2521, 2816, 2835, 2839
MabI	ACCWGGT	2 cut(s)	928, 1483
MaeI	CTAG	9 cut(s)	120, 207, 318, 831, 1163, 1830, 2499, 2528, 3455
MaeII	ACGT	3 cut(s)	619, 1384, 3201
MaeIII	GTNAC	9 cut(s)	198, 256, 970, 1184, 1203, 1273, 1307, 1832, 3253
MfeI	CAATTG	2 cut(s)	1318, 3249
MflI	RGATCY	6 cut(s)	373, 1067, 2293, 2308, 2504, 3024
MhlI	GDGCHC	4 cut(s)	1477, 1690, 2449, 3547
Mly113I	GGCGCC	1 cut(s)	47
MlyI	GAGTC	8 cut(s)	452, 1673, 1841, 2009, 2427, 2792, 3008, 3239
MmeI	TCCRAC	3 cut(s)	86, 860, 2775
Mph1103I	ATGCAT	3 cut(s)	1108, 2431, 2809
MroI	TCCGGA	2 cut(s)	1226, 1850
MroXI	GAANNNNTTC	3 cut(s)	1125, 1550, 2401
MseI	TTAA	7 cut(s)	183, 1199, 1568, 2253, 2613, 2909, 3224
MslI	CAYNNNNRTG	6 cut(s)	654, 1351, 1861, 2177, 2763, 2835
MspA1I	CMGCKG	3 cut(s)	1008, 2600, 2915
MspI	CCGG	7 cut(s)	596, 794, 953, 1095, 1227, 1851, 3397
MunI	CAATTG	2 cut(s)	1318, 3249
MvaI	CCWGG	8 cut(s)	240, 576, 930, 966, 1260, 1485, 1971, 2860
MwoI	GCNNNNNNNGC	9 cut(s)	46, 406, 1373, 1868, 2422, 2594, 2603, 2912, 2921
NarI	GGCGCC	1 cut(s)	47
NciI	CCSGG	2 cut(s)	795, 1095
NcoI	CCATGG	1 cut(s)	899
NmuCI	GTSAC	7 cut(s)	198, 256, 1203, 1273, 1307, 1832, 3253
NsiI	ATGCAT	3 cut(s)	1108, 2431, 2809
NspI	RCATGY	9 cut(s)	765, 1000, 1025, 1866, 1875, 2129, 2176, 2429, 3078
NspV	TTCGAA	1 cut(s)	167
OliI	CACNNNNGTG	1 cut(s)	654
PaeI	GCATGC	1 cut(s)	2429
PagI	TCATGA	1 cut(s)	1033
PasI	CCCWGGG	1 cut(s)	239
PciSI	GCTCTTC	1 cut(s)	1599
PcsI	WCGNNNNNNNCGW	1 cut(s)	2807
PdmI	GAANNNNTTC	3 cut(s)	1125, 1550, 2401
PfeI	GAWTC	7 cut(s)	1255, 1302, 1607, 2029, 3323, 3414, 3436
PflMI	CCANNNNNTGG	2 cut(s)	331, 522
PfoI	TCCNGGA	2 cut(s)	793, 1093
PleI	GAGTC	8 cut(s)	451, 1672, 1841, 2009, 2426, 2792, 3007, 3239
PluTI	GGCGCC	1 cut(s)	50
PpsI	GAGTC	8 cut(s)	451, 1672, 1841, 2009, 2426, 2792, 3007, 3239
Ppu21I	YACGTR	2 cut(s)	620, 1385
PpuMI	RGGWCCY	1 cut(s)	3206
PshAI	GACNNNNGTC	1 cut(s)	3204
Psp124BI	GAGCTC	1 cut(s)	2449
Psp5II	RGGWCCY	1 cut(s)	3206
Psp6I	CCWGG	8 cut(s)	238, 574, 928, 964, 1258, 1483, 1969, 2858
PspGI	CCWGG	8 cut(s)	238, 574, 928, 964, 1258, 1483, 1969, 2858
PspOMI	GGGCCC	1 cut(s)	3543
PspPI	GGNCC	6 cut(s)	235, 659, 2352, 3206, 3543, 3544
PspPPI	RGGWCCY	1 cut(s)	3206
PstI	CTGCAG	1 cut(s)	3579
PstNI	CAGNNNCTG	3 cut(s)	376, 536, 2600
PsuI	RGATCY	6 cut(s)	373, 1067, 2293, 2308, 2504, 3024
PvuII	CAGCTG	3 cut(s)	1008, 2600, 2915
RseI	CAYNNNNRTG	6 cut(s)	654, 1351, 1861, 2177, 2763, 2835
SacI	GAGCTC	1 cut(s)	2449
SapI	GCTCTTC	1 cut(s)	1599
SaqAI	TTAA	7 cut(s)	183, 1199, 1568, 2253, 2613, 2909, 3224
Sau96I	GGNCC	6 cut(s)	235, 659, 2352, 3206, 3543, 3544
ScaI	AGTACT	1 cut(s)	2668
SchI	GAGTC	8 cut(s)	452, 1673, 1841, 2009, 2427, 2792, 3008, 3239
SduI	GDGCHC	4 cut(s)	1477, 1690, 2449, 3547
SexAI	ACCWGGT	2 cut(s)	928, 1483
SfaNI	GCATC	7 cut(s)	873, 1232, 1896, 2521, 2816, 2835, 2839
SfcI	CTRYAG	3 cut(s)	2022, 2673, 3575
SfoI	GGCGCC	1 cut(s)	48
SfuI	TTCGAA	1 cut(s)	167
SinI	GGWCC	4 cut(s)	235, 659, 2352, 3206
SmiMI	CAYNNNNRTG	6 cut(s)	654, 1351, 1861, 2177, 2763, 2835
SnaBI	TACGTA	1 cut(s)	1385
SphI	GCATGC	1 cut(s)	2429
SsiI	CCGC	7 cut(s)	211, 625, 1379, 1492, 1682, 2604, 3062
SspDI	GGCGCC	1 cut(s)	46
SspI	AATATT	2 cut(s)	2083, 2639
SspMI	CTAG	9 cut(s)	120, 207, 318, 831, 1163, 1830, 2499, 2528, 3455
SstI	GAGCTC	1 cut(s)	2449
StyI	CCWWGG	3 cut(s)	447, 899, 1283
TaiI	ACGT	3 cut(s)	622, 1387, 3204
TaqI	TCGA	6 cut(s)	101, 167, 441, 2319, 2329, 2810
TatI	WGTACW	5 cut(s)	1742, 1782, 2666, 3236, 3484
TauI	GCSGC	2 cut(s)	214, 2606
TfiI	GAWTC	7 cut(s)	1255, 1302, 1607, 2029, 3323, 3414, 3436
Tru1I	TTAA	7 cut(s)	183, 1199, 1568, 2253, 2613, 2909, 3224
Tru9I	TTAA	7 cut(s)	183, 1199, 1568, 2253, 2613, 2909, 3224
TscAI	CASTG	5 cut(s)	1684, 2159, 2284, 3340, 3390
TseFI	GTSAC	7 cut(s)	198, 256, 1203, 1273, 1307, 1832, 3253
Tsp45I	GTSAC	7 cut(s)	198, 256, 1203, 1273, 1307, 1832, 3253
TspGWI	ACGGA	4 cut(s)	481, 1736, 1946, 2122
TspRI	CASTG	5 cut(s)	1684, 2159, 2284, 3340, 3390
Van91I	CCANNNNNTGG	2 cut(s)	331, 522
VpaK11BI	GGWCC	4 cut(s)	235, 659, 2352, 3206
XbaI	TCTAGA	2 cut(s)	2498, 2527
XceI	RCATGY	9 cut(s)	765, 1000, 1025, 1866, 1875, 2129, 2176, 2429, 3078
XmnI	GAANNNNTTC	3 cut(s)	1125, 1550, 2401
XspI	CTAG	9 cut(s)	120, 207, 318, 831, 1163, 1830, 2499, 2528, 3455
ZrmI	AGTACT	1 cut(s)	2668
Zsp2I	ATGCAT	3 cut(s)	1108, 2431, 2809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.