lysine-specific demethylase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04240 |
| fragaria_vesca | FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 |
| malus_domestica | MD01G1106000.v1.1 MD07G1172400.v1.1 |
| prunus_persica | Prupe.2G211400_v2.0.a1 Prupe.2G211400_v2.0.a1 |
| pyrus_communis | pycom01g13280 pycom07g16690 |
| rosa_chinensis | RchiOBHm_Chr1g0362971 |
| rosa_laevigata | RLG00000027605 |
| rosa_multiflora | Rmu_sc0000174.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00293590 |
| rosa_rugosa | Rorug01G0302900 Rorug01G0303000 Rorug01G0303100 Rorug01G0303200 |
| rosa_samantha | Rh1AG312100 Rh1BG275600 Rh1CG292500 Rh1DG306300 |
| rosa_wichuraiana | Rw1G027660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 3 cut(s) | 1670, 2080, 2693 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1838 |
| Acc36I | ACCTGC | 6 cut(s) | 1230, 1670, 2080, 2693, 2711, 3943 |
| Acc65I | GGTACC | 1 cut(s) | 2736 |
| AccB1I | GGYRCC | 4 cut(s) | 46, 321, 2736, 3232 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 331, 3668, 3773, 4184 |
| AccBSI | CCGCTC | 1 cut(s) | 4564 |
| AccI | GTMKAC | 3 cut(s) | 1842, 2000, 2584 |
| AccII | CGCG | 3 cut(s) | 1498, 2149, 3077 |
| AccIII | TCCGGA | 1 cut(s) | 3534 |
| AcoI | YGGCCR | 1 cut(s) | 4565 |
| AcuI | CTGAAG | 9 cut(s) | 1580, 1919, 2988, 3105, 3447, 3663, 4026, 4257, 4588 |
| AcyI | GRCGYC | 1 cut(s) | 47 |
| AdeI | CACNNNGTG | 1 cut(s) | 1676 |
| AflII | CTTAAG | 1 cut(s) | 2416 |
| AflIII | ACRYGT | 2 cut(s) | 758, 3562 |
| AgeI | ACCGGT | 1 cut(s) | 592 |
| AjnI | CCWGG | 8 cut(s) | 571, 925, 1090, 1255, 1480, 1966, 3505, 3772 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 579, 611, 3720, 3752, 3760, 3792 |
| AleI | CACNNNNGTG | 2 cut(s) | 3575, 4455 |
| Alw21I | GWGCWC | 3 cut(s) | 1687, 2513, 3483 |
| Alw26I | GTCTC | 8 cut(s) | 496, 699, 2052, 2137, 3305, 3571, 4168, 4323 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 533, 4067 |
| Ama87I | CYCGRG | 3 cut(s) | 50, 961, 2506 |
| Aor13HI | TCCGGA | 1 cut(s) | 3534 |
| AoxI | GGCC | 7 cut(s) | 334, 2005, 3658, 4156, 4475, 4565, 4594 |
| ApaI | GGGCCC | 1 cut(s) | 4160 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2843, 2875 |
| AseI | ATTAAT | 1 cut(s) | 2960 |
| AsiGI | ACCGGT | 1 cut(s) | 592 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1122, 2443 |
| Asp718I | GGTACC | 1 cut(s) | 2736 |
| AspLEI | GCGC | 1 cut(s) | 49 |
| AspS9I | GGNCC | 9 cut(s) | 334, 1470, 2394, 3509, 3659, 3716, 4156, 4157, 4476 |
| AsuC2I | CCSGG | 2 cut(s) | 962, 963 |
| AvaI | CYCGRG | 3 cut(s) | 50, 961, 2506 |
| AvaII | GGWCC | 4 cut(s) | 1470, 2394, 3509, 3716 |
| AxyI | CCTNAGG | 1 cut(s) | 1206 |
| BaeGI | GKGCMC | 4 cut(s) | 215, 4160, 4490, 4531 |
| BamHI | GGATCC | 3 cut(s) | 2041, 2080, 3265 |
| BanI | GGYRCC | 4 cut(s) | 46, 321, 2736, 3232 |
| BanII | GRGCYC | 6 cut(s) | 1665, 2507, 2513, 3438, 3483, 4160 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1362, 1394 |
| BauI | CACGAG | 2 cut(s) | 2815, 3975 |
| BbsI | GAAGAC | 2 cut(s) | 2394, 4044 |
| Bbv12I | GWGCWC | 3 cut(s) | 1687, 2513, 3483 |
| BbvCI | CCTCAGC | 1 cut(s) | 3285 |
| BccI | CCATC | 8 cut(s) | 272, 284, 388, 1425, 1918, 2016, 3261, 3290 |
| BceAI | ACGGC | 4 cut(s) | 3913, 4440, 4552, 4611 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4336, 4370 |
| BciT130I | CCWGG | 8 cut(s) | 573, 927, 1092, 1257, 1482, 1968, 3507, 3774 |
| BciVI | GTATCC | 1 cut(s) | 781 |
| BclI | TGATCA | 1 cut(s) | 1747 |
| BcnI | CCSGG | 2 cut(s) | 962, 963 |
| BcoDI | GTCTC | 8 cut(s) | 496, 699, 2052, 2137, 3305, 3571, 4168, 4323 |
| BfaI | CTAG | 9 cut(s) | 120, 300, 450, 828, 1160, 3474, 3957, 4334, 4373 |
| BfmI | CTRYAG | 5 cut(s) | 1374, 2001, 3489, 3540, 3816 |
| BfoI | RGCGCY | 1 cut(s) | 50 |
| BfrI | CTTAAG | 1 cut(s) | 2416 |
| BfuAI | ACCTGC | 6 cut(s) | 1230, 1670, 2080, 2693, 2711, 3943 |
| BfuI | GTATCC | 1 cut(s) | 781 |
| BglII | AGATCT | 3 cut(s) | 2335, 2350, 2546 |
| Bme18I | GGWCC | 4 cut(s) | 1470, 2394, 3509, 3716 |
| BmeT110I | CYCGRG | 3 cut(s) | 50, 961, 2506 |
| BmgT120I | GGNCC | 9 cut(s) | 334, 1470, 2394, 3509, 3659, 3716, 4156, 4157, 4476 |
| BmrI | ACTGGG | 3 cut(s) | 1187, 1668, 3399 |
| BmsI | GCATC | 7 cut(s) | 1229, 1931, 2333, 2789, 2874, 3911, 4183 |
| BmuI | ACTGGG | 3 cut(s) | 1187, 1668, 3399 |
| BpiI | GAAGAC | 2 cut(s) | 2394, 4044 |
| BpmI | CTGGAG | 3 cut(s) | 774, 1989, 4578 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3285 |
| BpuEI | CTTGAG | 6 cut(s) | 1941, 2003, 2183, 3612, 3969, 4466 |
| BpuMI | CCSGG | 2 cut(s) | 962, 963 |
| BsaAI | YACGTR | 1 cut(s) | 1382 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2551, 3077 |
| BsaHI | GRCGYC | 1 cut(s) | 47 |
| BsaI | GGTCTC | 4 cut(s) | 496, 2137, 3305, 4168 |
| BsaWI | WCCGGW | 3 cut(s) | 592, 3534, 3870 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2199, 2229, 2615, 2645 |
| Bse118I | RCCGGY | 1 cut(s) | 592 |
| Bse21I | CCTNAGG | 1 cut(s) | 1206 |
| Bse3DI | GCAATG | 5 cut(s) | 497, 3318, 4056, 4203, 4449 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2551, 3077 |
| BseAI | TCCGGA | 1 cut(s) | 3534 |
| BseBI | CCWGG | 8 cut(s) | 573, 927, 1092, 1257, 1482, 1968, 3507, 3774 |
| BseGI | GGATG | 7 cut(s) | 283, 2447, 2569, 2617, 3305, 3346, 4198 |
| BseJI | GATNNNNATC | 2 cut(s) | 2551, 3077 |
| BseMI | GCAATG | 5 cut(s) | 497, 3318, 4056, 4203, 4449 |
| BseRI | GAGGAG | 2 cut(s) | 640, 4253 |
| BseSI | GKGCMC | 4 cut(s) | 215, 4160, 4490, 4531 |
| BseX3I | CGGCCG | 1 cut(s) | 4565 |
| BseYI | CCCAGC | 1 cut(s) | 4184 |
| BsgI | GTGCAG | 3 cut(s) | 1698, 3212, 4053 |
| Bsh1236I | CGCG | 3 cut(s) | 1498, 2149, 3077 |
| Bsh1285I | CGRYCG | 2 cut(s) | 62, 4568 |
| BshFI | GGCC | 7 cut(s) | 336, 2007, 3660, 4158, 4477, 4567, 4596 |
| BshNI | GGYRCC | 4 cut(s) | 46, 321, 2736, 3232 |
| BshTI | ACCGGT | 1 cut(s) | 592 |
| BsiEI | CGRYCG | 2 cut(s) | 62, 4568 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1687, 2513, 3483 |
| BsiHKCI | CYCGRG | 3 cut(s) | 50, 961, 2506 |
| BsiSI | CCGG | 4 cut(s) | 593, 962, 3535, 3871 |
| BslFI | GGGAC | 4 cut(s) | 1456, 1864, 2669, 2813 |
| BsmAI | GTCTC | 8 cut(s) | 496, 699, 2052, 2137, 3305, 3571, 4168, 4323 |
| BsmBI | CGTCTC | 1 cut(s) | 2052 |
| BsmFI | GGGAC | 4 cut(s) | 1456, 1864, 2669, 2813 |
| BsnI | GGCC | 7 cut(s) | 336, 2007, 3660, 4158, 4477, 4567, 4596 |
| Bso31I | GGTCTC | 4 cut(s) | 496, 2137, 3305, 4168 |
| BsoBI | CYCGRG | 3 cut(s) | 50, 961, 2506 |
| Bsp120I | GGGCCC | 1 cut(s) | 4156 |
| Bsp13I | TCCGGA | 1 cut(s) | 3534 |
| Bsp68I | TCGCGA | 1 cut(s) | 3077 |
| BspANI | GGCC | 7 cut(s) | 336, 2007, 3660, 4158, 4477, 4567, 4596 |
| BspEI | TCCGGA | 1 cut(s) | 3534 |
| BspFNI | CGCG | 3 cut(s) | 1498, 2149, 3077 |
| BspHI | TCATGA | 1 cut(s) | 1030 |
| BspMAI | CTGCAG | 3 cut(s) | 1378, 3493, 3544 |
| BspMI | ACCTGC | 6 cut(s) | 1230, 1670, 2080, 2693, 2711, 3943 |
| BspQI | GCTCTTC | 1 cut(s) | 3652 |
| BspT107I | GGYRCC | 4 cut(s) | 46, 321, 2736, 3232 |
| BspTI | CTTAAG | 1 cut(s) | 2416 |
| BspTNI | GGTCTC | 4 cut(s) | 496, 2137, 3305, 4168 |
| BsrBI | CCGCTC | 1 cut(s) | 4564 |
| BsrDI | GCAATG | 5 cut(s) | 497, 3318, 4056, 4203, 4449 |
| BsrFI | RCCGGY | 1 cut(s) | 592 |
| BssAI | RCCGGY | 1 cut(s) | 592 |
| BssNI | GRCGYC | 1 cut(s) | 47 |
| BssSI | CACGAG | 2 cut(s) | 2815, 3975 |
| BssT1I | CCWWGG | 7 cut(s) | 896, 1280, 1466, 2898, 3635, 4178, 4490 |
| Bst2BI | CACGAG | 2 cut(s) | 2815, 3975 |
| Bst2UI | CCWGG | 8 cut(s) | 573, 927, 1092, 1257, 1482, 1968, 3507, 3774 |
| Bst6I | CTCTTC | 2 cut(s) | 626, 3652 |
| BstACI | GRCGYC | 1 cut(s) | 47 |
| BstAFI | CTTAAG | 1 cut(s) | 2416 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4067 |
| BstBAI | YACGTR | 1 cut(s) | 1382 |
| BstC8I | GCNNGC | 5 cut(s) | 204, 919, 2169, 2469, 3926 |
| BstDSI | CCRYGG | 2 cut(s) | 1306, 2147 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4494 |
| BstF5I | GGATG | 7 cut(s) | 283, 2447, 2569, 2617, 3305, 3346, 4198 |
| BstFNI | CGCG | 3 cut(s) | 1498, 2149, 3077 |
| BstH2I | RGCGCY | 1 cut(s) | 50 |
| BstHHI | GCGC | 1 cut(s) | 49 |
| BstMAI | GTCTC | 8 cut(s) | 496, 699, 2052, 2137, 3305, 3571, 4168, 4323 |
| BstMCI | CGRYCG | 2 cut(s) | 62, 4568 |
| BstNI | CCWGG | 8 cut(s) | 573, 927, 1092, 1257, 1482, 1968, 3507, 3774 |
| BstNSI | RCATGY | 6 cut(s) | 762, 852, 1863, 2171, 2471, 3566 |
| BstSFI | CTRYAG | 5 cut(s) | 1374, 2001, 3489, 3540, 3816 |
| BstSLI | GKGCMC | 4 cut(s) | 215, 4160, 4490, 4531 |
| BstSNI | TACGTA | 1 cut(s) | 1382 |
| BstUI | CGCG | 3 cut(s) | 1498, 2149, 3077 |
| BstV2I | GAAGAC | 2 cut(s) | 2394, 4044 |
| BstX2I | RGATCY | 9 cut(s) | 1064, 2041, 2080, 2335, 2350, 2546, 2727, 3265, 4276 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3178 |
| BstYI | RGATCY | 9 cut(s) | 1064, 2041, 2080, 2335, 2350, 2546, 2727, 3265, 4276 |
| BstZI | CGGCCG | 1 cut(s) | 4565 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1206 |
| BsuI | GTATCC | 1 cut(s) | 781 |
| BsuRI | GGCC | 7 cut(s) | 336, 2007, 3660, 4158, 4477, 4567, 4596 |
| BtgI | CCRYGG | 2 cut(s) | 1306, 2147 |
| BtsCI | GGATG | 7 cut(s) | 283, 2447, 2569, 2617, 3305, 3346, 4198 |
| BtsI | GCAGTG | 1 cut(s) | 4051 |
| BtuMI | TCGCGA | 1 cut(s) | 3077 |
| BveI | ACCTGC | 6 cut(s) | 1230, 1670, 2080, 2693, 2711, 3943 |
| Cac8I | GCNNGC | 5 cut(s) | 204, 919, 2169, 2469, 3926 |
| CaiI | CAGNNNCTG | 2 cut(s) | 533, 4067 |
| CciI | TCATGA | 1 cut(s) | 1030 |
| CfoI | GCGC | 1 cut(s) | 49 |
| Cfr10I | RCCGGY | 1 cut(s) | 592 |
| Cfr13I | GGNCC | 9 cut(s) | 334, 1470, 2394, 3509, 3659, 3716, 4156, 4157, 4476 |
| Cfr42I | CCGCGG | 1 cut(s) | 2150 |
| Cfr9I | CCCGGG | 1 cut(s) | 961 |
| CsiI | ACCWGGT | 3 cut(s) | 925, 1480, 3772 |
| CspAI | ACCGGT | 1 cut(s) | 592 |
| DinI | GGCGCC | 1 cut(s) | 48 |
| DraIII | CACNNNGTG | 1 cut(s) | 1676 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1838 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1838 |
| EaeI | YGGCCR | 1 cut(s) | 4565 |
| EagI | CGGCCG | 1 cut(s) | 4565 |
| Eam1104I | CTCTTC | 2 cut(s) | 626, 3652 |
| EarI | CTCTTC | 2 cut(s) | 626, 3652 |
| EciI | GGCGGA | 2 cut(s) | 366, 637 |
| Ecl136II | GAGCTC | 2 cut(s) | 2511, 3481 |
| EclXI | CGGCCG | 1 cut(s) | 4565 |
| Eco105I | TACGTA | 1 cut(s) | 1382 |
| Eco130I | CCWWGG | 7 cut(s) | 896, 1280, 1466, 2898, 3635, 4178, 4490 |
| Eco24I | GRGCYC | 6 cut(s) | 1665, 2507, 2513, 3438, 3483, 4160 |
| Eco31I | GGTCTC | 4 cut(s) | 496, 2137, 3305, 4168 |
| Eco32I | GATATC | 3 cut(s) | 958, 2905, 3141 |
| Eco47I | GGWCC | 4 cut(s) | 1470, 2394, 3509, 3716 |
| Eco52I | CGGCCG | 1 cut(s) | 4565 |
| Eco53kI | GAGCTC | 2 cut(s) | 2511, 3481 |
| Eco57I | CTGAAG | 9 cut(s) | 1580, 1919, 2988, 3105, 3447, 3663, 4026, 4257, 4588 |
| Eco81I | CCTNAGG | 1 cut(s) | 1206 |
| Eco88I | CYCGRG | 3 cut(s) | 50, 961, 2506 |
| EcoICRI | GAGCTC | 2 cut(s) | 2511, 3481 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4494 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1470, 4156, 4476 |
| EcoRI | GAATTC | 7 cut(s) | 637, 1227, 1961, 2443, 2809, 3353, 3530 |
| EcoRII | CCWGG | 8 cut(s) | 571, 925, 1090, 1255, 1480, 1966, 3505, 3772 |
| EcoRV | GATATC | 3 cut(s) | 958, 2905, 3141 |
| EcoT14I | CCWWGG | 7 cut(s) | 896, 1280, 1466, 2898, 3635, 4178, 4490 |
| EcoT22I | ATGCAT | 3 cut(s) | 850, 1105, 2473 |
| EcoT38I | GRGCYC | 6 cut(s) | 1665, 2507, 2513, 3438, 3483, 4160 |
| EgeI | GGCGCC | 1 cut(s) | 48 |
| EheI | GGCGCC | 1 cut(s) | 48 |
| ErhI | CCWWGG | 7 cut(s) | 896, 1280, 1466, 2898, 3635, 4178, 4490 |
| Esp3I | CGTCTC | 1 cut(s) | 2052 |
| FaqI | GGGAC | 4 cut(s) | 1456, 1864, 2669, 2813 |
| FauI | CCCGC | 2 cut(s) | 1482, 4202 |
| FbaI | TGATCA | 1 cut(s) | 1747 |
| FblI | GTMKAC | 3 cut(s) | 1842, 2000, 2584 |
| FokI | GGATG | 7 cut(s) | 290, 2434, 2556, 2624, 3312, 3353, 4205 |
| FriOI | GRGCYC | 6 cut(s) | 1665, 2507, 2513, 3438, 3483, 4160 |
| FspBI | CTAG | 9 cut(s) | 120, 300, 450, 828, 1160, 3474, 3957, 4334, 4373 |
| GlaI | GCGC | 1 cut(s) | 48 |
| GsaI | CCCAGC | 1 cut(s) | 4188 |
| GsuI | CTGGAG | 3 cut(s) | 774, 1989, 4578 |
| HaeII | RGCGCY | 1 cut(s) | 50 |
| HaeIII | GGCC | 7 cut(s) | 336, 2007, 3660, 4158, 4477, 4567, 4596 |
| HapII | CCGG | 4 cut(s) | 593, 962, 3535, 3871 |
| HhaI | GCGC | 1 cut(s) | 49 |
| Hin1I | GRCGYC | 1 cut(s) | 47 |
| Hin6I | GCGC | 1 cut(s) | 47 |
| HinP1I | GCGC | 1 cut(s) | 47 |
| HincII | GTYRAC | 2 cut(s) | 1153, 1843 |
| HindII | GTYRAC | 2 cut(s) | 1153, 1843 |
| HindIII | AAGCTT | 2 cut(s) | 2105, 2561 |
| HpaII | CCGG | 4 cut(s) | 593, 962, 3535, 3871 |
| Hpy166II | GTNNAC | 7 cut(s) | 932, 985, 1153, 1843, 2001, 2585, 4552 |
| Hpy8I | GTNNAC | 7 cut(s) | 932, 985, 1153, 1843, 2001, 2585, 4552 |
| HpyCH4IV | ACGT | 4 cut(s) | 1020, 1381, 1578, 2214 |
| HpySE526I | ACGT | 4 cut(s) | 1020, 1381, 1578, 2214 |
| Hsp92I | GRCGYC | 1 cut(s) | 47 |
| HspAI | GCGC | 1 cut(s) | 47 |
| KasI | GGCGCC | 1 cut(s) | 46 |
| Kpn2I | TCCGGA | 1 cut(s) | 3534 |
| KpnI | GGTACC | 1 cut(s) | 2740 |
| Ksp22I | TGATCA | 1 cut(s) | 1747 |
| KspI | CCGCGG | 1 cut(s) | 2150 |
| LguI | GCTCTTC | 1 cut(s) | 3652 |
| LweI | GCATC | 7 cut(s) | 1229, 1931, 2333, 2789, 2874, 3911, 4183 |
| MabI | ACCWGGT | 3 cut(s) | 925, 1480, 3772 |
| MaeI | CTAG | 9 cut(s) | 120, 300, 450, 828, 1160, 3474, 3957, 4334, 4373 |
| MaeII | ACGT | 4 cut(s) | 1020, 1381, 1578, 2214 |
| MbiI | CCGCTC | 1 cut(s) | 4564 |
| MfeI | CAATTG | 4 cut(s) | 22, 87, 2268, 3450 |
| MflI | RGATCY | 9 cut(s) | 1064, 2041, 2080, 2335, 2350, 2546, 2727, 3265, 4276 |
| Mly113I | GGCGCC | 1 cut(s) | 47 |
| MlyI | GAGTC | 5 cut(s) | 58, 701, 1838, 3388, 4557 |
| MmeI | TCCRAC | 2 cut(s) | 857, 4017 |
| Mph1103I | ATGCAT | 3 cut(s) | 850, 1105, 2473 |
| MroI | TCCGGA | 1 cut(s) | 3534 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1122, 2443 |
| MslI | CAYNNNNRTG | 6 cut(s) | 992, 1858, 3575, 4437, 4455, 4467 |
| MspA1I | CMGCKG | 3 cut(s) | 1426, 2149, 4395 |
| MspCI | CTTAAG | 1 cut(s) | 2416 |
| MspI | CCGG | 4 cut(s) | 593, 962, 3535, 3871 |
| MunI | CAATTG | 4 cut(s) | 22, 87, 2268, 3450 |
| MvaI | CCWGG | 8 cut(s) | 573, 927, 1092, 1257, 1482, 1968, 3507, 3774 |
| MvnI | CGCG | 3 cut(s) | 1498, 2149, 3077 |
| NarI | GGCGCC | 1 cut(s) | 47 |
| NciI | CCSGG | 2 cut(s) | 962, 963 |
| NruI | TCGCGA | 1 cut(s) | 3077 |
| NsiI | ATGCAT | 3 cut(s) | 850, 1105, 2473 |
| NspI | RCATGY | 6 cut(s) | 762, 852, 1863, 2171, 2471, 3566 |
| OliI | CACNNNNGTG | 2 cut(s) | 3575, 4455 |
| PaeI | GCATGC | 2 cut(s) | 2171, 2471 |
| PagI | TCATGA | 1 cut(s) | 1030 |
| PaqCI | CACCTGC | 3 cut(s) | 1670, 2080, 2693 |
| PciI | ACATGT | 2 cut(s) | 758, 3562 |
| PciSI | GCTCTTC | 1 cut(s) | 3652 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1584 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1122, 2443 |
| PfeI | GAWTC | 9 cut(s) | 373, 440, 1299, 1604, 2708, 2992, 3167, 3497, 3620 |
| PflFI | GACNNNGTC | 1 cut(s) | 1444 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 331, 3668, 3773, 4184 |
| PfoI | TCCNGGA | 1 cut(s) | 1090 |
| PinAI | ACCGGT | 1 cut(s) | 592 |
| PleI | GAGTC | 5 cut(s) | 58, 701, 1838, 3387, 4556 |
| PluTI | GGCGCC | 1 cut(s) | 50 |
| PpsI | GAGTC | 5 cut(s) | 58, 701, 1838, 3387, 4556 |
| Ppu21I | YACGTR | 1 cut(s) | 1382 |
| PpuMI | RGGWCCY | 1 cut(s) | 1470 |
| PscI | ACATGT | 2 cut(s) | 758, 3562 |
| PshBI | ATTAAT | 1 cut(s) | 2960 |
| Psp124BI | GAGCTC | 2 cut(s) | 2513, 3483 |
| Psp5II | RGGWCCY | 1 cut(s) | 1470 |
| Psp6I | CCWGG | 8 cut(s) | 571, 925, 1090, 1255, 1480, 1966, 3505, 3772 |
| PspFI | CCCAGC | 1 cut(s) | 4184 |
| PspGI | CCWGG | 8 cut(s) | 571, 925, 1090, 1255, 1480, 1966, 3505, 3772 |
| PspOMI | GGGCCC | 1 cut(s) | 4156 |
| PspPI | GGNCC | 9 cut(s) | 334, 1470, 2394, 3509, 3659, 3716, 4156, 4157, 4476 |
| PspPPI | RGGWCCY | 1 cut(s) | 1470 |
| PstI | CTGCAG | 3 cut(s) | 1378, 3493, 3544 |
| PstNI | CAGNNNCTG | 2 cut(s) | 533, 4067 |
| PsuI | RGATCY | 9 cut(s) | 1064, 2041, 2080, 2335, 2350, 2546, 2727, 3265, 4276 |
| PsyI | GACNNNGTC | 1 cut(s) | 1444 |
| PvuII | CAGCTG | 1 cut(s) | 1426 |
| RruI | TCGCGA | 1 cut(s) | 3077 |
| RseI | CAYNNNNRTG | 6 cut(s) | 992, 1858, 3575, 4437, 4455, 4467 |
| SacI | GAGCTC | 2 cut(s) | 2513, 3483 |
| SacII | CCGCGG | 1 cut(s) | 2150 |
| SalI | GTCGAC | 1 cut(s) | 1841 |
| SapI | GCTCTTC | 1 cut(s) | 3652 |
| Sau96I | GGNCC | 9 cut(s) | 334, 1470, 2394, 3509, 3659, 3716, 4156, 4157, 4476 |
| SchI | GAGTC | 5 cut(s) | 58, 701, 1838, 3388, 4557 |
| SexAI | ACCWGGT | 3 cut(s) | 925, 1480, 3772 |
| SfaNI | GCATC | 7 cut(s) | 1229, 1931, 2333, 2789, 2874, 3911, 4183 |
| SfcI | CTRYAG | 5 cut(s) | 1374, 2001, 3489, 3540, 3816 |
| SfoI | GGCGCC | 1 cut(s) | 48 |
| Sfr303I | CCGCGG | 1 cut(s) | 2150 |
| SgrBI | CCGCGG | 1 cut(s) | 2150 |
| SinI | GGWCC | 4 cut(s) | 1470, 2394, 3509, 3716 |
| SmaI | CCCGGG | 1 cut(s) | 963 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 992, 1858, 3575, 4437, 4455, 4467 |
| SmlI | CTYRAG | 7 cut(s) | 1956, 1982, 2162, 2416, 3627, 3984, 4481 |
| SmoI | CTYRAG | 7 cut(s) | 1956, 1982, 2162, 2416, 3627, 3984, 4481 |
| SnaBI | TACGTA | 1 cut(s) | 1382 |
| SphI | GCATGC | 2 cut(s) | 2171, 2471 |
| SspDI | GGCGCC | 1 cut(s) | 46 |
| SspI | AATATT | 2 cut(s) | 1946, 2675 |
| SspMI | CTAG | 9 cut(s) | 120, 300, 450, 828, 1160, 3474, 3957, 4334, 4373 |
| SstI | GAGCTC | 2 cut(s) | 2513, 3483 |
| StyI | CCWWGG | 7 cut(s) | 896, 1280, 1466, 2898, 3635, 4178, 4490 |
| TaiI | ACGT | 4 cut(s) | 1023, 1384, 1581, 2217 |
| TaqI | TCGA | 7 cut(s) | 58, 101, 167, 1842, 2327, 2361, 2551 |
| TaqII | GACCGA | 1 cut(s) | 76 |
| TatI | WGTACW | 2 cut(s) | 2913, 3700 |
| TauI | GCSGC | 3 cut(s) | 3284, 4347, 4567 |
| TfiI | GAWTC | 9 cut(s) | 373, 440, 1299, 1604, 2708, 2992, 3167, 3497, 3620 |
| TspGWI | ACGGA | 5 cut(s) | 596, 1576, 2034, 4546, 4651 |
| TspMI | CCCGGG | 1 cut(s) | 961 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1444 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 331, 3668, 3773, 4184 |
| Vha464I | CTTAAG | 1 cut(s) | 2416 |
| VpaK11BI | GGWCC | 4 cut(s) | 1470, 2394, 3509, 3716 |
| VspI | ATTAAT | 1 cut(s) | 2960 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4494 |
| XbaI | TCTAGA | 1 cut(s) | 3956 |
| XceI | RCATGY | 6 cut(s) | 762, 852, 1863, 2171, 2471, 3566 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1727 |
| XmaI | CCCGGG | 1 cut(s) | 961 |
| XmiI | GTMKAC | 3 cut(s) | 1842, 2000, 2584 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1122, 2443 |
| XspI | CTAG | 9 cut(s) | 120, 300, 450, 828, 1160, 3474, 3957, 4334, 4373 |
| Zsp2I | ATGCAT | 3 cut(s) | 850, 1105, 2473 |