lysine-specific demethylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04240 |
| fragaria_vesca | FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 |
| malus_domestica | MD01G1106000.v1.1 MD07G1172400.v1.1 |
| prunus_persica | Prupe.2G211400_v2.0.a1 Prupe.2G211400_v2.0.a1 |
| pyrus_communis | pycom01g13280 pycom07g16690 |
| rosa_chinensis | RchiOBHm_Chr1g0362971 |
| rosa_laevigata | RLG00000027605 |
| rosa_multiflora | Rmu_sc0000174.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00293590 |
| rosa_rugosa | Rorug01G0302900 Rorug01G0303000 Rorug01G0303100 Rorug01G0303200 |
| rosa_samantha | Rh1AG312100 Rh1BG275600 Rh1CG292500 Rh1DG306300 |
| rosa_wichuraiana | Rw1G027660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3585 |
| Acc16I | TGCGCA | 1 cut(s) | 4130 |
| Acc36I | ACCTGC | 3 cut(s) | 1233, 2421, 4348 |
| Acc65I | GGTACC | 1 cut(s) | 772 |
| AccB1I | GGYRCC | 4 cut(s) | 46, 321, 772, 3388 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 331 |
| AciI | CCGC | 7 cut(s) | 211, 377, 625, 1492, 2416, 3000, 4525 |
| AcuI | CTGAAG | 8 cut(s) | 1922, 1980, 2763, 3180, 3489, 3804, 4161, 4383 |
| AcvI | CACGTG | 1 cut(s) | 3890 |
| AcyI | GRCGYC | 1 cut(s) | 47 |
| AdeI | CACNNNGTG | 1 cut(s) | 3680 |
| AgeI | ACCGGT | 1 cut(s) | 3391 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3616 |
| AhlI | ACTAGT | 2 cut(s) | 799, 3707 |
| AjiI | CACGTC | 2 cut(s) | 862, 2369 |
| AleI | CACNNNNGTG | 2 cut(s) | 654, 4587 |
| Alw21I | GWGCWC | 3 cut(s) | 2730, 4515, 4686 |
| Alw26I | GTCTC | 6 cut(s) | 3461, 3600, 3940, 4071, 4300, 4387 |
| Alw44I | GTGCAC | 2 cut(s) | 4511, 4682 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 536 |
| Ama87I | CYCGRG | 1 cut(s) | 50 |
| AoxI | GGCC | 8 cut(s) | 212, 2141, 3664, 4289, 4314, 4607, 4659, 4726 |
| ApaI | GGGCCC | 1 cut(s) | 4663 |
| ApaLI | GTGCAC | 2 cut(s) | 4511, 4682 |
| AsiGI | ACCGGT | 1 cut(s) | 3391 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1125, 2440 |
| Asp718I | GGTACC | 1 cut(s) | 772 |
| AspA2I | CCTAGG | 1 cut(s) | 4465 |
| AspLEI | GCGC | 2 cut(s) | 49, 4131 |
| AspS9I | GGNCC | 9 cut(s) | 659, 2391, 2431, 3665, 4289, 4314, 4608, 4659, 4660 |
| AsuC2I | CCSGG | 2 cut(s) | 795, 4318 |
| AvaI | CYCGRG | 1 cut(s) | 50 |
| AvaII | GGWCC | 3 cut(s) | 659, 2391, 2431 |
| AvrII | CCTAGG | 1 cut(s) | 4465 |
| AxyI | CCTNAGG | 1 cut(s) | 1209 |
| BaeGI | GKGCMC | 4 cut(s) | 4515, 4622, 4663, 4686 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1871, 1904 |
| BamHI | GGATCC | 3 cut(s) | 373, 2038, 2077 |
| BanI | GGYRCC | 4 cut(s) | 46, 321, 772, 3388 |
| BanII | GRGCYC | 1 cut(s) | 4663 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1365, 1397, 1651, 1683 |
| BauI | CACGAG | 2 cut(s) | 3817, 4068 |
| BbrPI | CACGTG | 1 cut(s) | 3890 |
| BbsI | GAAGAC | 2 cut(s) | 1530, 1659 |
| Bbv12I | GWGCWC | 3 cut(s) | 2730, 4515, 4686 |
| BccI | CCATC | 8 cut(s) | 242, 272, 284, 391, 1428, 1921, 2357, 3739 |
| BceAI | ACGGC | 5 cut(s) | 1602, 3013, 4572, 4735, 4743 |
| BciVI | GTATCC | 2 cut(s) | 1717, 1872 |
| BclI | TGATCA | 1 cut(s) | 1750 |
| BcnI | CCSGG | 2 cut(s) | 795, 4318 |
| BcoDI | GTCTC | 6 cut(s) | 3461, 3600, 3940, 4071, 4300, 4387 |
| BcuI | ACTAGT | 2 cut(s) | 799, 3707 |
| BfoI | RGCGCY | 1 cut(s) | 50 |
| BfuAI | ACCTGC | 3 cut(s) | 1233, 2421, 4348 |
| BfuI | GTATCC | 2 cut(s) | 1717, 1872 |
| BglII | AGATCT | 2 cut(s) | 2347, 2543 |
| BlnI | CCTAGG | 1 cut(s) | 4465 |
| BlpI | GCTNAGC | 1 cut(s) | 207 |
| BmcAI | AGTACT | 4 cut(s) | 1744, 2698, 2848, 4138 |
| Bme18I | GGWCC | 3 cut(s) | 659, 2391, 2431 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3616 |
| BmeT110I | CYCGRG | 1 cut(s) | 50 |
| BmgBI | CACGTC | 2 cut(s) | 862, 2369 |
| BmgT120I | GGNCC | 9 cut(s) | 659, 2391, 2431, 3665, 4289, 4314, 4608, 4659, 4660 |
| BmrI | ACTGGG | 1 cut(s) | 3555 |
| BmuI | ACTGGG | 1 cut(s) | 3555 |
| BoxI | GACNNNNGTC | 1 cut(s) | 802 |
| BpiI | GAAGAC | 2 cut(s) | 1530, 1659 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2027, 2059 |
| BpmI | CTGGAG | 5 cut(s) | 1116, 1983, 1992, 3642, 4710 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2938 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 207 |
| BpuMI | CCSGG | 2 cut(s) | 795, 4318 |
| BsaAI | YACGTR | 3 cut(s) | 620, 1385, 3890 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2757, 3050, 4346 |
| BsaHI | GRCGYC | 1 cut(s) | 47 |
| BsaI | GGTCTC | 2 cut(s) | 4300, 4387 |
| BsaWI | WCCGGW | 2 cut(s) | 595, 3391 |
| Bse118I | RCCGGY | 1 cut(s) | 3391 |
| Bse1I | ACTGG | 4 cut(s) | 2534, 3561, 4373, 4693 |
| Bse21I | CCTNAGG | 1 cut(s) | 1209 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2757, 3050, 4346 |
| BseJI | GATNNNNATC | 3 cut(s) | 2757, 3050, 4346 |
| BseNI | ACTGG | 4 cut(s) | 2534, 3561, 4373, 4693 |
| BseRI | GAGGAG | 4 cut(s) | 643, 3927, 4254, 4514 |
| BseSI | GKGCMC | 4 cut(s) | 4515, 4622, 4663, 4686 |
| BseYI | CCCAGC | 1 cut(s) | 4171 |
| BsgI | GTGCAG | 3 cut(s) | 1043, 1641, 3368 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1159 |
| BshFI | GGCC | 8 cut(s) | 214, 2143, 3666, 4291, 4316, 4609, 4661, 4728 |
| BshNI | GGYRCC | 4 cut(s) | 46, 321, 772, 3388 |
| BshTI | ACCGGT | 1 cut(s) | 3391 |
| BsiEI | CGRYCG | 1 cut(s) | 1159 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2730, 4515, 4686 |
| BsiHKCI | CYCGRG | 1 cut(s) | 50 |
| BsiSI | CCGG | 5 cut(s) | 596, 794, 953, 3392, 4317 |
| BslFI | GGGAC | 4 cut(s) | 308, 810, 1459, 3154 |
| BsmAI | GTCTC | 6 cut(s) | 3461, 3600, 3940, 4071, 4300, 4387 |
| BsmBI | CGTCTC | 1 cut(s) | 4071 |
| BsmFI | GGGAC | 4 cut(s) | 308, 810, 1459, 3154 |
| BsnI | GGCC | 8 cut(s) | 214, 2143, 3666, 4291, 4316, 4609, 4661, 4728 |
| Bso31I | GGTCTC | 2 cut(s) | 4300, 4387 |
| BsoBI | CYCGRG | 1 cut(s) | 50 |
| Bsp120I | GGGCCC | 1 cut(s) | 4659 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2730, 4515, 4622, 4663, 4686 |
| Bsp1407I | TGTACA | 1 cut(s) | 1782 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 207 |
| Bsp19I | CCATGG | 1 cut(s) | 899 |
| BspACI | CCGC | 7 cut(s) | 211, 377, 625, 1492, 2416, 3000, 4525 |
| BspANI | GGCC | 8 cut(s) | 214, 2143, 3666, 4291, 4316, 4609, 4661, 4728 |
| BspHI | TCATGA | 2 cut(s) | 1033, 4042 |
| BspMAI | CTGCAG | 6 cut(s) | 1381, 2263, 3286, 3439, 3649, 3700 |
| BspMI | ACCTGC | 3 cut(s) | 1233, 2421, 4348 |
| BspQI | GCTCTTC | 2 cut(s) | 1599, 2739 |
| BspT107I | GGYRCC | 4 cut(s) | 46, 321, 772, 3388 |
| BspTNI | GGTCTC | 2 cut(s) | 4300, 4387 |
| BsrFI | RCCGGY | 1 cut(s) | 3391 |
| BsrGI | TGTACA | 1 cut(s) | 1782 |
| BsrI | ACTGG | 4 cut(s) | 2534, 3561, 4373, 4693 |
| BssAI | RCCGGY | 1 cut(s) | 3391 |
| BssNI | GRCGYC | 1 cut(s) | 47 |
| BssSI | CACGAG | 2 cut(s) | 3817, 4068 |
| BssT1I | CCWWGG | 6 cut(s) | 899, 1283, 3984, 4310, 4419, 4465 |
| Bst2BI | CACGAG | 2 cut(s) | 3817, 4068 |
| Bst6I | CTCTTC | 6 cut(s) | 629, 1599, 2739, 2976, 4359, 4385 |
| BstACI | GRCGYC | 1 cut(s) | 47 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2267 |
| BstAUI | TGTACA | 1 cut(s) | 1782 |
| BstBAI | YACGTR | 3 cut(s) | 620, 1385, 3890 |
| BstC8I | GCNNGC | 4 cut(s) | 922, 2466, 3022, 4440 |
| BstDSI | CCRYGG | 4 cut(s) | 765, 899, 2144, 4622 |
| BstH2I | RGCGCY | 1 cut(s) | 50 |
| BstHHI | GCGC | 2 cut(s) | 49, 4131 |
| BstMAI | GTCTC | 6 cut(s) | 3461, 3600, 3940, 4071, 4300, 4387 |
| BstMCI | CGRYCG | 1 cut(s) | 1159 |
| BstNSI | RCATGY | 7 cut(s) | 1000, 1866, 1875, 2072, 2168, 2215, 2468 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 802 |
| BstSLI | GKGCMC | 4 cut(s) | 4515, 4622, 4663, 4686 |
| BstSNI | TACGTA | 1 cut(s) | 1385 |
| BstV2I | GAAGAC | 2 cut(s) | 1530, 1659 |
| BstX2I | RGATCY | 7 cut(s) | 373, 1067, 2038, 2077, 2347, 2543, 3051 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 361, 656 |
| BstYI | RGATCY | 7 cut(s) | 373, 1067, 2038, 2077, 2347, 2543, 3051 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1209 |
| BsuI | GTATCC | 2 cut(s) | 1717, 1872 |
| BsuRI | GGCC | 8 cut(s) | 214, 2143, 3666, 4291, 4316, 4609, 4661, 4728 |
| BtgI | CCRYGG | 4 cut(s) | 765, 899, 2144, 4622 |
| BtgZI | GCGATG | 2 cut(s) | 1833, 2744 |
| BtrI | CACGTC | 2 cut(s) | 862, 2369 |
| BtsI | GCAGTG | 4 cut(s) | 312, 1677, 2198, 3279 |
| BtsIMutI | CAGTG | 8 cut(s) | 312, 1131, 1677, 2198, 3279, 3840, 4380, 4686 |
| BveI | ACCTGC | 3 cut(s) | 1233, 2421, 4348 |
| Cac8I | GCNNGC | 4 cut(s) | 922, 2466, 3022, 4440 |
| CaiI | CAGNNNCTG | 1 cut(s) | 536 |
| CciI | TCATGA | 2 cut(s) | 1033, 4042 |
| CfoI | GCGC | 2 cut(s) | 49, 4131 |
| Cfr10I | RCCGGY | 1 cut(s) | 3391 |
| Cfr13I | GGNCC | 9 cut(s) | 659, 2391, 2431, 3665, 4289, 4314, 4608, 4659, 4660 |
| CsiI | ACCWGGT | 2 cut(s) | 928, 1483 |
| CspAI | ACCGGT | 1 cut(s) | 3391 |
| DinI | GGCGCC | 1 cut(s) | 48 |
| DraI | TTTAAA | 2 cut(s) | 1569, 2644 |
| DraIII | CACNNNGTG | 1 cut(s) | 3680 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3585 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3616 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3585 |
| Eam1104I | CTCTTC | 6 cut(s) | 629, 1599, 2739, 2976, 4359, 4385 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3616 |
| EarI | CTCTTC | 6 cut(s) | 629, 1599, 2739, 2976, 4359, 4385 |
| EciI | GGCGGA | 3 cut(s) | 366, 640, 3015 |
| Eco105I | TACGTA | 1 cut(s) | 1385 |
| Eco130I | CCWWGG | 6 cut(s) | 899, 1283, 3984, 4310, 4419, 4465 |
| Eco24I | GRGCYC | 1 cut(s) | 4663 |
| Eco31I | GGTCTC | 2 cut(s) | 4300, 4387 |
| Eco32I | GATATC | 2 cut(s) | 961, 2893 |
| Eco47I | GGWCC | 3 cut(s) | 659, 2391, 2431 |
| Eco57I | CTGAAG | 8 cut(s) | 1922, 1980, 2763, 3180, 3489, 3804, 4161, 4383 |
| Eco72I | CACGTG | 1 cut(s) | 3890 |
| Eco81I | CCTNAGG | 1 cut(s) | 1209 |
| Eco88I | CYCGRG | 1 cut(s) | 50 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4608 |
| EcoRI | GAATTC | 4 cut(s) | 640, 1230, 1702, 3509 |
| EcoRV | GATATC | 2 cut(s) | 961, 2893 |
| EcoT14I | CCWWGG | 6 cut(s) | 899, 1283, 3984, 4310, 4419, 4465 |
| EcoT22I | ATGCAT | 3 cut(s) | 1108, 2470, 2859 |
| EcoT38I | GRGCYC | 1 cut(s) | 4663 |
| EgeI | GGCGCC | 1 cut(s) | 48 |
| EheI | GGCGCC | 1 cut(s) | 48 |
| ErhI | CCWWGG | 6 cut(s) | 899, 1283, 3984, 4310, 4419, 4465 |
| Esp3I | CGTCTC | 1 cut(s) | 4071 |
| FaqI | GGGAC | 4 cut(s) | 308, 810, 1459, 3154 |
| FauNDI | CATATG | 2 cut(s) | 1141, 2813 |
| FbaI | TGATCA | 1 cut(s) | 1750 |
| FriOI | GRGCYC | 1 cut(s) | 4663 |
| FspI | TGCGCA | 1 cut(s) | 4130 |
| GlaI | GCGC | 2 cut(s) | 48, 4130 |
| GsaI | CCCAGC | 1 cut(s) | 4175 |
| GsuI | CTGGAG | 5 cut(s) | 1116, 1983, 1992, 3642, 4710 |
| HaeII | RGCGCY | 1 cut(s) | 50 |
| HaeIII | GGCC | 8 cut(s) | 214, 2143, 3666, 4291, 4316, 4609, 4661, 4728 |
| HapII | CCGG | 5 cut(s) | 596, 794, 953, 3392, 4317 |
| HhaI | GCGC | 2 cut(s) | 49, 4131 |
| Hin1I | GRCGYC | 1 cut(s) | 47 |
| Hin6I | GCGC | 2 cut(s) | 47, 4129 |
| HinP1I | GCGC | 2 cut(s) | 47, 4129 |
| HincII | GTYRAC | 4 cut(s) | 807, 1846, 2527, 3590 |
| HindII | GTYRAC | 4 cut(s) | 807, 1846, 2527, 3590 |
| HindIII | AAGCTT | 2 cut(s) | 884, 1923 |
| HpaI | GTTAAC | 1 cut(s) | 2527 |
| HpaII | CCGG | 5 cut(s) | 596, 794, 953, 3392, 4317 |
| HpyCH4IV | ACGT | 7 cut(s) | 297, 619, 861, 1023, 1384, 2368, 3889 |
| HpySE526I | ACGT | 7 cut(s) | 297, 619, 861, 1023, 1384, 2368, 3889 |
| Hsp92I | GRCGYC | 1 cut(s) | 47 |
| HspAI | GCGC | 2 cut(s) | 47, 4129 |
| KasI | GGCGCC | 1 cut(s) | 46 |
| KpnI | GGTACC | 1 cut(s) | 776 |
| Ksp22I | TGATCA | 1 cut(s) | 1750 |
| KspAI | GTTAAC | 1 cut(s) | 2527 |
| LguI | GCTCTTC | 2 cut(s) | 1599, 2739 |
| LmnI | GCTCC | 6 cut(s) | 468, 2182, 2204, 2257, 2708, 4640 |
| MabI | ACCWGGT | 2 cut(s) | 928, 1483 |
| MaeII | ACGT | 7 cut(s) | 297, 619, 861, 1023, 1384, 2368, 3889 |
| MfeI | CAATTG | 4 cut(s) | 87, 1318, 3142, 3249 |
| MflI | RGATCY | 7 cut(s) | 373, 1067, 2038, 2077, 2347, 2543, 3051 |
| MhlI | GDGCHC | 5 cut(s) | 2730, 4515, 4622, 4663, 4686 |
| Mly113I | GGCGCC | 1 cut(s) | 47 |
| MmeI | TCCRAC | 6 cut(s) | 86, 860, 2096, 2805, 3449, 4290 |
| Mph1103I | ATGCAT | 3 cut(s) | 1108, 2470, 2859 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1125, 2440 |
| MspA1I | CMGCKG | 5 cut(s) | 1008, 1429, 3440, 4458, 4527 |
| MspI | CCGG | 5 cut(s) | 596, 794, 953, 3392, 4317 |
| MunI | CAATTG | 4 cut(s) | 87, 1318, 3142, 3249 |
| NarI | GGCGCC | 1 cut(s) | 47 |
| NciI | CCSGG | 2 cut(s) | 795, 4318 |
| NcoI | CCATGG | 1 cut(s) | 899 |
| NdeI | CATATG | 2 cut(s) | 1141, 2813 |
| NsbI | TGCGCA | 1 cut(s) | 4130 |
| NsiI | ATGCAT | 3 cut(s) | 1108, 2470, 2859 |
| NspI | RCATGY | 7 cut(s) | 1000, 1866, 1875, 2072, 2168, 2215, 2468 |
| OliI | CACNNNNGTG | 2 cut(s) | 654, 4587 |
| PaeI | GCATGC | 1 cut(s) | 2468 |
| PagI | TCATGA | 2 cut(s) | 1033, 4042 |
| PciSI | GCTCTTC | 2 cut(s) | 1599, 2739 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1232 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1125, 2440 |
| PfeI | GAWTC | 7 cut(s) | 1255, 1302, 1607, 2012, 3209, 3535, 3776 |
| PflFI | GACNNNGTC | 2 cut(s) | 1447, 4209 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 331 |
| PfoI | TCCNGGA | 1 cut(s) | 1093 |
| PinAI | ACCGGT | 1 cut(s) | 3391 |
| PluTI | GGCGCC | 1 cut(s) | 50 |
| PmaCI | CACGTG | 1 cut(s) | 3890 |
| PmlI | CACGTG | 1 cut(s) | 3890 |
| Ppu21I | YACGTR | 3 cut(s) | 620, 1385, 3890 |
| PshAI | GACNNNNGTC | 1 cut(s) | 802 |
| PspCI | CACGTG | 1 cut(s) | 3890 |
| PspFI | CCCAGC | 1 cut(s) | 4171 |
| PspOMI | GGGCCC | 1 cut(s) | 4659 |
| PspPI | GGNCC | 9 cut(s) | 659, 2391, 2431, 3665, 4289, 4314, 4608, 4659, 4660 |
| PstI | CTGCAG | 6 cut(s) | 1381, 2263, 3286, 3439, 3649, 3700 |
| PstNI | CAGNNNCTG | 1 cut(s) | 536 |
| PsuI | RGATCY | 7 cut(s) | 373, 1067, 2038, 2077, 2347, 2543, 3051 |
| PsyI | GACNNNGTC | 2 cut(s) | 1447, 4209 |
| PvuII | CAGCTG | 4 cut(s) | 1008, 1429, 3440, 4458 |
| SapI | GCTCTTC | 2 cut(s) | 1599, 2739 |
| Sau96I | GGNCC | 9 cut(s) | 659, 2391, 2431, 3665, 4289, 4314, 4608, 4659, 4660 |
| ScaI | AGTACT | 4 cut(s) | 1744, 2698, 2848, 4138 |
| SduI | GDGCHC | 5 cut(s) | 2730, 4515, 4622, 4663, 4686 |
| SexAI | ACCWGGT | 2 cut(s) | 928, 1483 |
| SfoI | GGCGCC | 1 cut(s) | 48 |
| SinI | GGWCC | 3 cut(s) | 659, 2391, 2431 |
| SnaBI | TACGTA | 1 cut(s) | 1385 |
| SpeI | ACTAGT | 2 cut(s) | 799, 3707 |
| SphI | GCATGC | 1 cut(s) | 2468 |
| SsiI | CCGC | 7 cut(s) | 211, 377, 625, 1492, 2416, 3000, 4525 |
| SspDI | GGCGCC | 1 cut(s) | 46 |
| SspI | AATATT | 1 cut(s) | 2669 |
| StyI | CCWWGG | 6 cut(s) | 899, 1283, 3984, 4310, 4419, 4465 |
| TaiI | ACGT | 7 cut(s) | 300, 622, 864, 1026, 1387, 2371, 3892 |
| TaqI | TCGA | 4 cut(s) | 101, 1442, 2358, 2450 |
| TaqII | GACCGA | 1 cut(s) | 3575 |
| TatI | WGTACW | 5 cut(s) | 1742, 1782, 2696, 2846, 4136 |
| TauI | GCSGC | 1 cut(s) | 214 |
| TfiI | GAWTC | 7 cut(s) | 1255, 1302, 1607, 2012, 3209, 3535, 3776 |
| TscAI | CASTG | 8 cut(s) | 312, 1138, 1684, 2198, 3286, 3847, 4380, 4693 |
| TspGWI | ACGGA | 6 cut(s) | 754, 1080, 1224, 1736, 2161, 4783 |
| TspRI | CASTG | 8 cut(s) | 312, 1138, 1684, 2198, 3286, 3847, 4380, 4693 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1447, 4209 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 331 |
| VneI | GTGCAC | 2 cut(s) | 4511, 4682 |
| VpaK11BI | GGWCC | 3 cut(s) | 659, 2391, 2431 |
| XbaI | TCTAGA | 2 cut(s) | 2537, 2566 |
| XceI | RCATGY | 7 cut(s) | 1000, 1866, 1875, 2072, 2168, 2215, 2468 |
| XmaJI | CCTAGG | 1 cut(s) | 4465 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1125, 2440 |
| ZrmI | AGTACT | 4 cut(s) | 1744, 2698, 2848, 4138 |
| Zsp2I | ATGCAT | 3 cut(s) | 1108, 2470, 2859 |