Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005507

Physical Location & Seq

Genomic Coordinates Reverse (-)

41918613 .. 41921481

Gene Structure 2869 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0303200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGCCGAATCGGAGAGAGGATTATGAAGAAGAAGAAGAGGAGAGCGAGATGCGGGAGGAGCGAAGGGCCAATTCGAAGCGGGGGAGCTCGAATTCTGACGAGATTGAGATCCAGAAGCGGAGAGGGCGAGGGTCGAATTCGAAGAAGAGGAAATTGAAATCCGTTGCGGAGGAGGAGGAGGAGGAAGAAGGCGGTGGTGGAAGGCCTTTTAAGTCCATGTTTGTGGATGATGAGGCTATTGAGGATGAAGATGAGGATGAGGAGGAAGACGATGAGGGTGAATTGGATGGGTTTATTGTTAATGAACCGGAGTTTGATAACGAACCTGATGAAGTTGATCATGATGGCGGCGGTGGGAGAAGGATGGGGTTTGTGCTTCCGGAGGAAGAAGAAGAGGAGGATATTGATGAGTTTGAAAGAAGGGTTCAAGACAGATTTAGGGATGTTCATGTGGAAGAATATGAGGACGATACGGAGGTTGGACAGCAAGCTCTCATACCCGGTGTTAAGGACCCGAAATTGTGGTTGGTGAAGTGTGCCATTGGTAAAGAGAGAGAGGTAGCGGCTTGTCTAATGCACAAGTGTATTGATAACCCTGGAGAATTGCAGATCATGTCTGCCATTGCTTTGGATCACTTGAAAAGCTTCATATATGTTGAAGCTTACAAAGAAGCCCATGTGAGGGAAGCTTGCAGAGGTCTGAGGTATGTAATTCTGCAGAAAATAATGCTCGTTCCTATTAAAGAGATGATTGATGTGCTATCATGTGAAAGCAAGAGCGTTGTAAATGATAAATGGGTTAGGATTAAGACAGGAGTATATAAAGGGGACCTTGCCAAGATTGTGGGGCATGTCCCGGGGAGACAGCAAGTTAGAGTAAAGTTAATTCCAAGGGTTGATTTACAAGCTCTTGCAAAAGGTGTAGAATCATCGAAGAAGAAGGAATCTGGCACACGTCCTGATCGTGTTCCTGCACTTCTTAGGAACATGAACCTAGTTAGACAGCTGGGTGTACGAGTACAGTCCATGCGAGATCCATTGGCACGTGGTTATATTGAGAAGATTGATGGCTTATCTGGGATGATCTTTAAAGATGGTTTCCATCTTAAAGTTGTTTCTGATAAAAGTATAAAAGAGGCAAAACCCTCCTTGCAGGAACTTGAAGAATTCCAGGAACTTGATGGTGATGGAGATCATACAATTCCAAATAGAAAGAAAGGCCAAAGCTTTATGAAGGGCGATGCAGTTATTGTTACGGAGGGAGATCTGAGAAACTTGGTGGGACGGGTTGAGAAAGTTGAGTTAGGGACTGTTCATATCAAAGCGGAAATGGATGGCCTCCCGGAAACTGTTGCCATCAATCAAACAGCACTTCAGAAATGCTTTAAAGAAGGGCAGCATGTGAAGGTTGTTAGTGGTAGTCAACAAGGAGCAACTGGCATGGTTGTTAAGGTTGATCAGCAGAAGCAGTTGATCACCATTTTATCTGATGCAGCCAATGAAGCTATCTGCGTGTTCTCTGATCATGTTGTGGAGAGTCCTGAAGTAAATAATGGTGATACAATGTGTGACTCCCACAACTTAAGGTATCACAAAACCCCTGGTCGAAGTCCGAGGTTTTCTGGAGGTGCAAGAAGGCATGATGGGCAGGATGGCTTTGGTAAAGGGAGCCGAGTAAAGTTCCGTCTAGGTCCCTATAAAGGCTGCAGGGGGCGTGTTGTGGAGGTTAAAGGATCAAATGTAAGGGTTGAACTAGAGTCCCAGATGAAAACTATTGTTGTTGATCGTCTGCATTGTATTTCAGAATCAGGTAATGTTGCTGCTGCAGTTACAACACCATATCGCTCGGGTTGTGAGACCCCAATGCCTTACATGAGGACTCCTATGAGAGATCCTGGAGCAACGTCAATGCCTTACATGACAACTCCCATGAGAGATCCTGGAGCATCCCCAATGCGTTATATGACGACTCCCTACATGATGACTCCCAGAAGAGATCCCCCCCGAGCAACACCAATACATGGTGGCATGAGAACTCCACCTATGACTCCCATGAGAGATCCCCGAGCAACACCGATACATGGTGGCATGAGGACCCCTCCTATATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003700 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009826 GO:0009889 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0014070 GO:0016043 GO:0016049 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0032451 GO:0032452 GO:0032502 GO:0032989 GO:0033169 GO:0033993 GO:0036211 GO:0040007 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045814 GO:0048519 GO:0048577 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048587 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0051276 GO:0060255 GO:0060560 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:0140110 GO:1901564 GO:1901700 GO:1903506 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

JmjC JmjN zf-C2H2

Protein Analysis

703

Amino Acids

78.97

Weight (kDa)

5.61

Isoelectric Point (pI)

51.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Spt5-NGN	PF03439	173 - 254	7.8e-24	Early transcription elongation factor of RNA pol II, NGN section
KOW1_SPT5	PF23042	262 - 390	3.5e-27	Transcription elongation factor SPT5, KOW1 domain
KOW2_Spt5	PF23284	412 - 461	5.1e-16	Transcription elongation factor SPT5, second KOW domain
KOW5_SPT5	PF23290	556 - 596	1.5e-12	Transcription elongation factor SPT5, fifth KOW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04240
fragaria_vesca	FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090 FvH4_7g19090
malus_domestica	MD01G1106000.v1.1 MD07G1172400.v1.1
prunus_persica	Prupe.2G211400_v2.0.a1 Prupe.2G211400_v2.0.a1
pyrus_communis	pycom01g13280 pycom07g16690
rosa_chinensis	RchiOBHm_Chr1g0362971
rosa_laevigata	RLG00000027605
rosa_multiflora	Rmu_sc0000174.1_g000009
rosa_roxburghii	Rroxscaffold_4G00293590
rosa_rugosa	Rorug01G0302900 Rorug01G0303000 Rorug01G0303100 Rorug01G0303200
rosa_samantha	Rh1AG312100 Rh1BG275600 Rh1CG292500 Rh1DG306300
rosa_wichuraiana	Rw1G027660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2021
AccIII	TCCGGA	1 cut(s)	379
AciI	CCGC	9 cut(s)	52, 79, 118, 167, 192, 348, 351, 563, 1325
AclWI	GGATC	8 cut(s)	103, 639, 1028, 1741, 1886, 1931, 1991, 2054
AcsI	RAATTY	3 cut(s)	91, 136, 1166
AcuI	CTGAAG	2 cut(s)	1358, 1563
AcvI	CACGTG	1 cut(s)	1046
AfaI	GTAC	2 cut(s)	1014, 1020
AfiI	CCNNNNNNNGG	5 cut(s)	681, 682, 1700, 2021, 2081
AflII	CTTAAG	1 cut(s)	1582
AflIII	ACRYGT	1 cut(s)	953
AgsI	TTSAA	7 cut(s)	157, 416, 428, 640, 659, 1163, 1751
AjiI	CACGTC	1 cut(s)	956
AjnI	CCWGG	5 cut(s)	595, 1170, 1600, 1894, 1939
AjuI	GAANNNNNNNTTGG	2 cut(s)	509, 541
AluBI	AGCT	9 cut(s)	87, 491, 645, 662, 689, 908, 1006, 1227, 1505
AluI	AGCT	9 cut(s)	87, 491, 645, 662, 689, 908, 1006, 1227, 1505
Alw21I	GWGCWC	1 cut(s)	89
Alw26I	GTCTC	2 cut(s)	856, 1850
AlwI	GGATC	8 cut(s)	103, 639, 1028, 1741, 1886, 1931, 1991, 2054
Ama87I	CYCGRG	4 cut(s)	856, 1846, 2004, 2064
Aor13HI	TCCGGA	1 cut(s)	379
AoxI	GGCC	4 cut(s)	66, 203, 1219, 1336
ApeKI	GCWGC	5 cut(s)	1396, 1493, 1704, 1820, 1823
ApoI	RAATTY	3 cut(s)	91, 136, 1166
Asp700I	GAANNNNTTC	1 cut(s)	644
AspS9I	GGNCC	5 cut(s)	66, 511, 829, 1691, 2094
AsuC2I	CCSGG	4 cut(s)	501, 857, 858, 1343
AsuHPI	GGTGA	5 cut(s)	290, 541, 1196, 1468, 1568
AsuII	TTCGAA	2 cut(s)	74, 140
AvaI	CYCGRG	4 cut(s)	856, 1846, 2004, 2064
AvaII	GGWCC	4 cut(s)	511, 829, 1691, 2094
BaeI	ACNNNNGTAYC	2 cut(s)	462, 495
BanII	GRGCYC	1 cut(s)	89
BbrPI	CACGTG	1 cut(s)	1046
BbsI	GAAGAC	1 cut(s)	273
Bbv12I	GWGCWC	1 cut(s)	89
BbvI	GCAGC	5 cut(s)	1408, 1505, 1691, 1807, 1810
BciT130I	CCWGG	5 cut(s)	597, 1172, 1602, 1896, 1941
BclI	TGATCA	4 cut(s)	337, 1456, 1473, 1522
BcnI	CCSGG	4 cut(s)	501, 857, 858, 1343
BcoDI	GTCTC	2 cut(s)	856, 1850
BfaI	CTAG	3 cut(s)	995, 1688, 1754
BfmI	CTRYAG	3 cut(s)	716, 1705, 1824
BfrI	CTTAAG	1 cut(s)	1582
BglII	AGATCT	1 cut(s)	1264
BisI	GCNGC	7 cut(s)	349, 564, 1397, 1494, 1705, 1821, 1824
BlsI	GCNGC	7 cut(s)	350, 565, 1398, 1495, 1706, 1822, 1825
Bme1390I	CCNGG	9 cut(s)	501, 597, 857, 858, 1172, 1343, 1602, 1896, 1941
Bme18I	GGWCC	4 cut(s)	511, 829, 1691, 2094
BmeT110I	CYCGRG	4 cut(s)	856, 1846, 2004, 2064
BmgBI	CACGTC	1 cut(s)	956
BmgT120I	GGNCC	5 cut(s)	66, 511, 829, 1691, 2094
BmiI	GGNNCC	5 cut(s)	513, 830, 1670, 1693, 2096
BmrFI	CCNGG	9 cut(s)	501, 597, 857, 858, 1172, 1343, 1602, 1896, 1941
BmsI	GCATC	4 cut(s)	39, 1231, 1480, 1955
BpiI	GAAGAC	1 cut(s)	273
BplI	GAGNNNNNCTC	1 cut(s)	2083
BpmI	CTGGAG	4 cut(s)	618, 1644, 1917, 1962
Bpu14I	TTCGAA	2 cut(s)	74, 140
BpuMI	CCSGG	4 cut(s)	501, 857, 858, 1343
BsaAI	YACGTR	1 cut(s)	1046
BsaBI	GATNNNNATC	2 cut(s)	107, 1191
BsaI	GGTCTC	1 cut(s)	1850
BsaJI	CCNNGG	6 cut(s)	595, 856, 857, 890, 1600, 1613
BsaWI	WCCGGW	2 cut(s)	307, 379
Bsc4I	CCNNNNNNNGG	5 cut(s)	681, 682, 1700, 2021, 2081
Bse1I	ACTGG	1 cut(s)	1441
Bse3DI	GCAATG	1 cut(s)	621
Bse8I	GATNNNNATC	2 cut(s)	107, 1191
BseAI	TCCGGA	1 cut(s)	379
BseBI	CCWGG	5 cut(s)	597, 1172, 1602, 1896, 1941
BseDI	CCNNGG	6 cut(s)	595, 856, 857, 890, 1600, 1613
BseJI	GATNNNNATC	2 cut(s)	107, 1191
BseLI	CCNNNNNNNGG	5 cut(s)	681, 682, 1700, 2021, 2081
BseMI	GCAATG	1 cut(s)	621
BseMII	CTCAG	2 cut(s)	692, 1259
BseNI	ACTGG	1 cut(s)	1441
BseRI	GAGGAG	8 cut(s)	53, 71, 185, 188, 191, 194, 275, 410
BseXI	GCAGC	5 cut(s)	1408, 1505, 1691, 1807, 1810
BseYI	CCCAGC	1 cut(s)	1006
BsgI	GTGCAG	1 cut(s)	957
BshFI	GGCC	4 cut(s)	68, 205, 1221, 1338
BsiHKAI	GWGCWC	1 cut(s)	89
BsiHKCI	CYCGRG	4 cut(s)	856, 1846, 2004, 2064
BsiSI	CCGG	5 cut(s)	308, 380, 501, 857, 1343
BslFI	GGGAC	6 cut(s)	839, 842, 1296, 1321, 1677, 1744
BslI	CCNNNNNNNGG	5 cut(s)	681, 682, 1700, 2021, 2081
BsmAI	GTCTC	2 cut(s)	856, 1850
BsmFI	GGGAC	6 cut(s)	839, 842, 1296, 1321, 1677, 1744
BsnI	GGCC	4 cut(s)	68, 205, 1221, 1338
Bso31I	GGTCTC	1 cut(s)	1850
BsoBI	CYCGRG	4 cut(s)	856, 1846, 2004, 2064
Bsp119I	TTCGAA	2 cut(s)	74, 140
Bsp1286I	GDGCHC	1 cut(s)	89
Bsp13I	TCCGGA	1 cut(s)	379
BspACI	CCGC	9 cut(s)	52, 79, 118, 167, 192, 348, 351, 563, 1325
BspANI	GGCC	4 cut(s)	68, 205, 1221, 1338
BspCNI	CTCAG	2 cut(s)	693, 1260
BspEI	TCCGGA	1 cut(s)	379
BspHI	TCATGA	1 cut(s)	340
BspLI	GGNNCC	5 cut(s)	513, 830, 1670, 1693, 2096
BspMAI	CTGCAG	3 cut(s)	720, 1709, 1828
BspPI	GGATC	8 cut(s)	103, 639, 1028, 1741, 1886, 1931, 1991, 2054
BspT104I	TTCGAA	2 cut(s)	74, 140
BspTI	CTTAAG	1 cut(s)	1582
BspTNI	GGTCTC	1 cut(s)	1850
BsrDI	GCAATG	1 cut(s)	621
BsrI	ACTGG	1 cut(s)	1441
BssECI	CCNNGG	6 cut(s)	595, 856, 857, 890, 1600, 1613
BssT1I	CCWWGG	1 cut(s)	890
Bst2UI	CCWGG	5 cut(s)	597, 1172, 1602, 1896, 1941
Bst4CI	ACNGT	3 cut(s)	1023, 1312, 1351
Bst6I	CTCTTC	4 cut(s)	30, 140, 387, 1987
BstAFI	CTTAAG	1 cut(s)	1582
BstBAI	YACGTR	1 cut(s)	1046
BstBI	TTCGAA	2 cut(s)	74, 140
BstC8I	GCNNGC	2 cut(s)	489, 691
BstDEI	CTNAG	3 cut(s)	701, 980, 1268
BstMAI	GTCTC	2 cut(s)	856, 1850
BstMWI	GCNNNNNNNGC	4 cut(s)	58, 124, 1502, 1645
BstNI	CCWGG	5 cut(s)	597, 1172, 1602, 1896, 1941
BstNSI	RCATGY	2 cut(s)	854, 1403
BstSCI	CCNGG	9 cut(s)	499, 595, 855, 856, 1170, 1341, 1600, 1894, 1939
BstSFI	CTRYAG	3 cut(s)	716, 1705, 1824
BstV1I	GCAGC	5 cut(s)	1408, 1505, 1691, 1807, 1810
BstV2I	GAAGAC	1 cut(s)	273
BstX2I	RGATCY	7 cut(s)	108, 1033, 1264, 1891, 1936, 1996, 2059
BstXI	CCANNNNNNTGG	3 cut(s)	223, 628, 844
BstYI	RGATCY	7 cut(s)	108, 1033, 1264, 1891, 1936, 1996, 2059
BsuRI	GGCC	4 cut(s)	68, 205, 1221, 1338
BtgZI	GCGATG	1 cut(s)	1254
BtrI	CACGTC	1 cut(s)	956
Cac8I	GCNNGC	2 cut(s)	489, 691
CciI	TCATGA	1 cut(s)	340
Cfr13I	GGNCC	5 cut(s)	66, 511, 829, 1691, 2094
Cfr9I	CCCGGG	1 cut(s)	856
Csp6I	GTAC	2 cut(s)	1013, 1019
CviQI	GTAC	2 cut(s)	1013, 1019
DdeI	CTNAG	3 cut(s)	701, 980, 1268
DraI	TTTAAA	2 cut(s)	1090, 1387
Eam1104I	CTCTTC	4 cut(s)	30, 140, 387, 1987
EarI	CTCTTC	4 cut(s)	30, 140, 387, 1987
Ecl136II	GAGCTC	1 cut(s)	87
Eco130I	CCWWGG	1 cut(s)	890
Eco147I	AGGCCT	1 cut(s)	205
Eco24I	GRGCYC	1 cut(s)	89
Eco31I	GGTCTC	1 cut(s)	1850
Eco47I	GGWCC	4 cut(s)	511, 829, 1691, 2094
Eco53kI	GAGCTC	1 cut(s)	87
Eco57I	CTGAAG	2 cut(s)	1358, 1563
Eco72I	CACGTG	1 cut(s)	1046
Eco88I	CYCGRG	4 cut(s)	856, 1846, 2004, 2064
EcoICRI	GAGCTC	1 cut(s)	87
EcoO109I	RGGNCCY	4 cut(s)	511, 829, 1691, 2094
EcoRI	GAATTC	3 cut(s)	91, 136, 1166
EcoRII	CCWGG	5 cut(s)	595, 1170, 1600, 1894, 1939
EcoT14I	CCWWGG	1 cut(s)	890
EcoT38I	GRGCYC	1 cut(s)	89
ErhI	CCWWGG	1 cut(s)	890
FalI	AAGNNNNNCTT	2 cut(s)	816, 848
FaqI	GGGAC	6 cut(s)	839, 842, 1296, 1321, 1677, 1744
FauI	CCCGC	2 cut(s)	45, 72
FbaI	TGATCA	4 cut(s)	337, 1456, 1473, 1522
Fnu4HI	GCNGC	7 cut(s)	349, 564, 1397, 1494, 1705, 1821, 1824
FriOI	GRGCYC	1 cut(s)	89
Fsp4HI	GCNGC	7 cut(s)	349, 564, 1397, 1494, 1705, 1821, 1824
FspBI	CTAG	3 cut(s)	995, 1688, 1754
GluI	GCNGC	7 cut(s)	349, 564, 1397, 1494, 1705, 1821, 1824
GsaI	CCCAGC	1 cut(s)	1010
GsuI	CTGGAG	4 cut(s)	618, 1644, 1917, 1962
HaeIII	GGCC	4 cut(s)	68, 205, 1221, 1338
HapII	CCGG	5 cut(s)	308, 380, 501, 857, 1343
HincII	GTYRAC	1 cut(s)	1424
HindII	GTYRAC	1 cut(s)	1424
HindIII	AAGCTT	4 cut(s)	643, 660, 687, 1225
HpaII	CCGG	5 cut(s)	308, 380, 501, 857, 1343
HphI	GGTGA	5 cut(s)	290, 541, 1196, 1468, 1568
Hpy166II	GTNNAC	2 cut(s)	1013, 1424
Hpy188III	TCNNGA	7 cut(s)	112, 341, 380, 428, 959, 1541, 1623
Hpy8I	GTNNAC	2 cut(s)	1013, 1424
HpyCH4III	ACNGT	3 cut(s)	1023, 1312, 1351
HpyCH4IV	ACGT	3 cut(s)	955, 1045, 1904
HpyF10VI	GCNNNNNNNGC	4 cut(s)	58, 124, 1502, 1645
HpyF3I	CTNAG	3 cut(s)	701, 980, 1268
HpySE526I	ACGT	3 cut(s)	955, 1045, 1904
Kpn2I	TCCGGA	1 cut(s)	379
Ksp22I	TGATCA	4 cut(s)	337, 1456, 1473, 1522
LmnI	GCTCC	6 cut(s)	58, 84, 1430, 1668, 1898, 1943
Lsp1109I	GCAGC	5 cut(s)	1408, 1505, 1691, 1807, 1810
LweI	GCATC	4 cut(s)	39, 1231, 1480, 1955
MaeI	CTAG	3 cut(s)	995, 1688, 1754
MaeII	ACGT	3 cut(s)	955, 1045, 1904
MaeIII	GTNAC	3 cut(s)	1252, 1568, 1828
MflI	RGATCY	7 cut(s)	108, 1033, 1264, 1891, 1936, 1996, 2059
MhlI	GDGCHC	1 cut(s)	89
MlyI	GAGTC	7 cut(s)	1546, 1565, 1766, 1873, 1963, 1978, 2041
MmeI	TCCRAC	1 cut(s)	460
MroI	TCCGGA	1 cut(s)	379
MroXI	GAANNNNTTC	1 cut(s)	644
MslI	CAYNNNNRTG	1 cut(s)	221
MspA1I	CMGCKG	1 cut(s)	1006
MspCI	CTTAAG	1 cut(s)	1582
MspI	CCGG	5 cut(s)	308, 380, 501, 857, 1343
MspR9I	CCNGG	9 cut(s)	501, 597, 857, 858, 1172, 1343, 1602, 1896, 1941
MvaI	CCWGG	5 cut(s)	597, 1172, 1602, 1896, 1941
MwoI	GCNNNNNNNGC	4 cut(s)	58, 124, 1502, 1645
NciI	CCSGG	4 cut(s)	501, 857, 858, 1343
NlaIV	GGNNCC	5 cut(s)	513, 830, 1670, 1693, 2096
NmeAIII	GCCGAG	1 cut(s)	1697
NmuCI	GTSAC	1 cut(s)	1568
NspI	RCATGY	2 cut(s)	854, 1403
NspV	TTCGAA	2 cut(s)	74, 140
PagI	TCATGA	1 cut(s)	340
PceI	AGGCCT	1 cut(s)	205
PcsI	WCGNNNNNNNCGW	1 cut(s)	961
PdmI	GAANNNNTTC	1 cut(s)	644
PfeI	GAWTC	4 cut(s)	7, 926, 944, 1805
PflMI	CCANNNNNTGG	1 cut(s)	2021
PfoI	TCCNGGA	4 cut(s)	1170, 1341, 1894, 1939
PkrI	GCNGC	7 cut(s)	350, 565, 1398, 1495, 1706, 1822, 1825
PleI	GAGTC	7 cut(s)	1545, 1565, 1765, 1873, 1963, 1978, 2041
PmaCI	CACGTG	1 cut(s)	1046
PmlI	CACGTG	1 cut(s)	1046
PpsI	GAGTC	7 cut(s)	1545, 1565, 1765, 1873, 1963, 1978, 2041
Ppu21I	YACGTR	1 cut(s)	1046
PpuMI	RGGWCCY	4 cut(s)	511, 829, 1691, 2094
Psp124BI	GAGCTC	1 cut(s)	89
Psp5II	RGGWCCY	4 cut(s)	511, 829, 1691, 2094
Psp6I	CCWGG	5 cut(s)	595, 1170, 1600, 1894, 1939
PspCI	CACGTG	1 cut(s)	1046
PspFI	CCCAGC	1 cut(s)	1006
PspGI	CCWGG	5 cut(s)	595, 1170, 1600, 1894, 1939
PspN4I	GGNNCC	5 cut(s)	513, 830, 1670, 1693, 2096
PspPI	GGNCC	5 cut(s)	66, 511, 829, 1691, 2094
PspPPI	RGGWCCY	4 cut(s)	511, 829, 1691, 2094
PstI	CTGCAG	3 cut(s)	720, 1709, 1828
PsuI	RGATCY	7 cut(s)	108, 1033, 1264, 1891, 1936, 1996, 2059
PvuII	CAGCTG	1 cut(s)	1006
RsaI	GTAC	2 cut(s)	1014, 1020
RsaNI	GTAC	2 cut(s)	1013, 1019
RseI	CAYNNNNRTG	1 cut(s)	221
SacI	GAGCTC	1 cut(s)	89
SatI	GCNGC	7 cut(s)	349, 564, 1397, 1494, 1705, 1821, 1824
Sau96I	GGNCC	5 cut(s)	66, 511, 829, 1691, 2094
SchI	GAGTC	7 cut(s)	1546, 1565, 1766, 1873, 1963, 1978, 2041
ScrFI	CCNGG	9 cut(s)	501, 597, 857, 858, 1172, 1343, 1602, 1896, 1941
SduI	GDGCHC	1 cut(s)	89
SfaNI	GCATC	4 cut(s)	39, 1231, 1480, 1955
SfcI	CTRYAG	3 cut(s)	716, 1705, 1824
SfuI	TTCGAA	2 cut(s)	74, 140
SinI	GGWCC	4 cut(s)	511, 829, 1691, 2094
SmaI	CCCGGG	1 cut(s)	858
SmiMI	CAYNNNNRTG	1 cut(s)	221
SmlI	CTYRAG	1 cut(s)	1582
SmoI	CTYRAG	1 cut(s)	1582
SseBI	AGGCCT	1 cut(s)	205
SsiI	CCGC	9 cut(s)	52, 79, 118, 167, 192, 348, 351, 563, 1325
SspMI	CTAG	3 cut(s)	995, 1688, 1754
SstI	GAGCTC	1 cut(s)	89
StuI	AGGCCT	1 cut(s)	205
StyD4I	CCNGG	9 cut(s)	499, 595, 855, 856, 1170, 1341, 1600, 1894, 1939
StyI	CCWWGG	1 cut(s)	890
TaaI	ACNGT	3 cut(s)	1023, 1312, 1351
TaiI	ACGT	3 cut(s)	958, 1048, 1907
TaqI	TCGA	6 cut(s)	74, 89, 134, 140, 932, 1606
TatI	WGTACW	1 cut(s)	1018
TauI	GCSGC	2 cut(s)	351, 566
TfiI	GAWTC	4 cut(s)	7, 926, 944, 1805
TseFI	GTSAC	1 cut(s)	1568
TseI	GCWGC	5 cut(s)	1396, 1493, 1704, 1820, 1823
Tsp45I	GTSAC	1 cut(s)	1568
TspGWI	ACGGA	4 cut(s)	151, 488, 1271, 1673
TspMI	CCCGGG	1 cut(s)	856
Van91I	CCANNNNNTGG	1 cut(s)	2021
Vha464I	CTTAAG	1 cut(s)	1582
VpaK11BI	GGWCC	4 cut(s)	511, 829, 1691, 2094
XapI	RAATTY	3 cut(s)	91, 136, 1166
XceI	RCATGY	2 cut(s)	854, 1403
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1178
XmaI	CCCGGG	1 cut(s)	856
XmnI	GAANNNNTTC	1 cut(s)	644
XspI	CTAG	3 cut(s)	995, 1688, 1754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.